NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087173

Metagenome / Metatranscriptome Family F087173

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087173
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 57 residues
Representative Sequence MDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQTVWHWHEGDEDE
Number of Associated Samples 69
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 62.39 %
% of genes near scaffold ends (potentially truncated) 27.27 %
% of genes from short scaffolds (< 2000 bps) 91.82 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (68.182 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(29.091 % of family members)
Environment Ontology (ENVO) Unclassified
(71.818 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(97.273 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 22.35%    Coil/Unstructured: 77.65%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF08299Bac_DnaA_C 28.18
PF01555N6_N4_Mtase 10.91
PF01047MarR 6.36
PF01520Amidase_3 3.64
PF00176SNF2-rel_dom 1.82
PF13463HTH_27 0.91
PF06508QueC 0.91
PF07589PEP-CTERM 0.91
PF10991DUF2815 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 28.18
COG0863DNA modification methylaseReplication, recombination and repair [L] 10.91
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 10.91
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 10.91
COG0860N-acetylmuramoyl-L-alanine amidaseCell wall/membrane/envelope biogenesis [M] 3.64
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 0.91
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.91
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.91
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.91
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.91
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 0.91
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.91
COG0780NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamilyTranslation, ribosomal structure and biogenesis [J] 0.91
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.18 %
All OrganismsrootAll Organisms31.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10077587Not Available1490Open in IMG/M
3300000115|DelMOSum2011_c10086128All Organisms → Viruses → Predicted Viral1073Open in IMG/M
3300000115|DelMOSum2011_c10132104Not Available765Open in IMG/M
3300000115|DelMOSum2011_c10139851All Organisms → Viruses → environmental samples → uncultured marine virus732Open in IMG/M
3300000115|DelMOSum2011_c10178538Not Available607Open in IMG/M
3300005942|Ga0070742_10082544Not Available882Open in IMG/M
3300006029|Ga0075466_1132361Not Available654Open in IMG/M
3300006484|Ga0070744_10234656Not Available520Open in IMG/M
3300006802|Ga0070749_10696690Not Available543Open in IMG/M
3300006803|Ga0075467_10283168Not Available888Open in IMG/M
3300006803|Ga0075467_10334806Not Available798Open in IMG/M
3300006803|Ga0075467_10695043Not Available518Open in IMG/M
3300006920|Ga0070748_1101614All Organisms → Viruses → Predicted Viral1096Open in IMG/M
3300006920|Ga0070748_1130731Not Available942Open in IMG/M
3300007229|Ga0075468_10093309Not Available962Open in IMG/M
3300007229|Ga0075468_10124938Not Available796Open in IMG/M
3300007231|Ga0075469_10056711All Organisms → Viruses → Predicted Viral1162Open in IMG/M
3300007231|Ga0075469_10069898Not Available1018Open in IMG/M
3300007231|Ga0075469_10134163Not Available680Open in IMG/M
3300007276|Ga0070747_1040397All Organisms → Viruses → Predicted Viral1816Open in IMG/M
3300007276|Ga0070747_1053480Not Available1544Open in IMG/M
3300007276|Ga0070747_1171312Not Available774Open in IMG/M
3300007276|Ga0070747_1232795Not Available643Open in IMG/M
3300007276|Ga0070747_1271838Not Available586Open in IMG/M
3300007540|Ga0099847_1252736Not Available505Open in IMG/M
3300007558|Ga0102822_1029879All Organisms → Viruses → Predicted Viral1304Open in IMG/M
3300007692|Ga0102823_1064820Not Available973Open in IMG/M
3300008995|Ga0102888_1107192Not Available571Open in IMG/M
3300008999|Ga0102816_1152295Not Available717Open in IMG/M
3300009002|Ga0102810_1173865Not Available662Open in IMG/M
3300009024|Ga0102811_1129699All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage943Open in IMG/M
3300009071|Ga0115566_10093425All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1947Open in IMG/M
3300009074|Ga0115549_1043693All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1628Open in IMG/M
3300009074|Ga0115549_1077322Not Available1139Open in IMG/M
3300009074|Ga0115549_1085468All Organisms → Viruses → Predicted Viral1070Open in IMG/M
3300009076|Ga0115550_1256473Not Available571Open in IMG/M
3300009080|Ga0102815_10075913Not Available1835Open in IMG/M
3300009149|Ga0114918_10277019Not Available945Open in IMG/M
3300009423|Ga0115548_1020854All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2649Open in IMG/M
3300009423|Ga0115548_1079790All Organisms → Viruses → environmental samples → uncultured marine virus1097Open in IMG/M
3300009423|Ga0115548_1194090Not Available630Open in IMG/M
3300009426|Ga0115547_1136540All Organisms → Viruses → environmental samples → uncultured marine virus790Open in IMG/M
3300009426|Ga0115547_1182920Not Available663Open in IMG/M
3300009426|Ga0115547_1250580Not Available553Open in IMG/M
3300009433|Ga0115545_1064645All Organisms → Viruses → environmental samples → uncultured marine virus1375Open in IMG/M
3300009433|Ga0115545_1223739Not Available637Open in IMG/M
3300009435|Ga0115546_1196514Not Available699Open in IMG/M
3300009438|Ga0115559_1042603Not Available2009Open in IMG/M
3300009440|Ga0115561_1232940Not Available692Open in IMG/M
3300009495|Ga0115571_1423801Not Available516Open in IMG/M
3300009505|Ga0115564_10628049Not Available504Open in IMG/M
3300009507|Ga0115572_10806169Not Available504Open in IMG/M
3300010316|Ga0136655_1230952Not Available551Open in IMG/M
3300010368|Ga0129324_10094359All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1297Open in IMG/M
3300010392|Ga0118731_102928946Not Available632Open in IMG/M
3300013010|Ga0129327_10087662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1534Open in IMG/M
3300013010|Ga0129327_10419359Not Available713Open in IMG/M
3300020166|Ga0206128_1042581All Organisms → cellular organisms → Bacteria2280Open in IMG/M
3300020169|Ga0206127_1008232All Organisms → cellular organisms → Bacteria8065Open in IMG/M
3300020169|Ga0206127_1106291All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1174Open in IMG/M
3300020182|Ga0206129_10079339All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1831Open in IMG/M
3300020182|Ga0206129_10081505All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1793Open in IMG/M
3300020182|Ga0206129_10085333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae1729Open in IMG/M
3300020182|Ga0206129_10094198All Organisms → Viruses → Predicted Viral1601Open in IMG/M
3300020187|Ga0206130_10280159All Organisms → Viruses → environmental samples → uncultured marine virus734Open in IMG/M
3300020187|Ga0206130_10330439Not Available643Open in IMG/M
3300021365|Ga0206123_10399169Not Available566Open in IMG/M
3300021378|Ga0213861_10177023Not Available1183Open in IMG/M
3300021378|Ga0213861_10358342Not Available729Open in IMG/M
3300022178|Ga0196887_1024865All Organisms → Viruses → Predicted Viral1734Open in IMG/M
3300022178|Ga0196887_1038248All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1290Open in IMG/M
3300022178|Ga0196887_1044937Not Available1153Open in IMG/M
3300022178|Ga0196887_1141055Not Available500Open in IMG/M
3300022206|Ga0224499_10320215Not Available524Open in IMG/M
3300022220|Ga0224513_10225313Not Available738Open in IMG/M
3300022220|Ga0224513_10337541Not Available603Open in IMG/M
3300023702|Ga0232119_1037758All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage739Open in IMG/M
3300024191|Ga0228636_1056926Not Available923Open in IMG/M
3300024231|Ga0233399_1068637Not Available878Open in IMG/M
3300024236|Ga0228655_1017568All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1813Open in IMG/M
3300024262|Ga0210003_1101561Not Available1307Open in IMG/M
3300024267|Ga0228623_1046205Not Available863Open in IMG/M
3300024293|Ga0228651_1106425Not Available633Open in IMG/M
3300024320|Ga0233398_1064534All Organisms → Viruses → environmental samples → uncultured marine virus917Open in IMG/M
3300024346|Ga0244775_10566709Not Available924Open in IMG/M
3300024346|Ga0244775_10849817Not Available728Open in IMG/M
3300024346|Ga0244775_10868178Not Available718Open in IMG/M
3300025543|Ga0208303_1036057Not Available1282Open in IMG/M
3300025570|Ga0208660_1019126All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2046Open in IMG/M
3300025570|Ga0208660_1070745Not Available818Open in IMG/M
3300025577|Ga0209304_1012967All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2940Open in IMG/M
3300025577|Ga0209304_1093381Not Available693Open in IMG/M
3300025590|Ga0209195_1049574All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1072Open in IMG/M
3300025590|Ga0209195_1117247Not Available572Open in IMG/M
3300025594|Ga0209094_1054604All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1022Open in IMG/M
3300025641|Ga0209833_1002004Not Available12708Open in IMG/M
3300025645|Ga0208643_1080332Not Available931Open in IMG/M
3300025645|Ga0208643_1108618Not Available750Open in IMG/M
3300025645|Ga0208643_1175687Not Available523Open in IMG/M
3300025652|Ga0208134_1102192Not Available791Open in IMG/M
3300025652|Ga0208134_1165966Not Available542Open in IMG/M
3300025652|Ga0208134_1173031Not Available524Open in IMG/M
3300025696|Ga0209532_1155894Not Available700Open in IMG/M
3300025806|Ga0208545_1123755Not Available647Open in IMG/M
3300025860|Ga0209119_1301105Not Available568Open in IMG/M
3300025892|Ga0209630_10137235All Organisms → Viruses → Predicted Viral1261Open in IMG/M
3300026479|Ga0228622_1002600Not Available7156Open in IMG/M
3300027751|Ga0208304_10038047Not Available1897Open in IMG/M
3300028127|Ga0233401_1068137All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage846Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous29.09%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine22.73%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater10.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater9.09%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine8.18%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine4.55%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine4.55%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.64%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.73%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment2.73%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.82%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300005942Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007231Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007558Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733EnvironmentalOpen in IMG/M
3300007692Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743EnvironmentalOpen in IMG/M
3300008995Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3EnvironmentalOpen in IMG/M
3300008999Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545EnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022206Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_24EnvironmentalOpen in IMG/M
3300022220Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21EnvironmentalOpen in IMG/M
3300023702Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 82R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024191Seawater microbial communities from Monterey Bay, California, United States - 45DEnvironmentalOpen in IMG/M
3300024231Seawater microbial communities from Monterey Bay, California, United States - 43DEnvironmentalOpen in IMG/M
3300024236Seawater microbial communities from Monterey Bay, California, United States - 67DEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024267Seawater microbial communities from Monterey Bay, California, United States - 28DEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024320Seawater microbial communities from Monterey Bay, California, United States - 38DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025577Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025860Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026479Seawater microbial communities from Monterey Bay, California, United States - 26DEnvironmentalOpen in IMG/M
3300027751Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)EnvironmentalOpen in IMG/M
3300028127Seawater microbial communities from Monterey Bay, California, United States - 49DEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1007758723300000101MarineMDTLENICEGGSMNGHTFNISTAAVQIGYRSGYYQKSAIKNTDGQTVWHWHEGDEDE*
DelMOSum2011_1008612823300000115MarineMDTLENICEGGSMNGHTFNISHAAVQIGYRSGYYQKSAIKNTDGQIVWHWHEGDEDE*
DelMOSum2011_1013210413300000115MarineMDPLENVCEGGGMNGHTFNISTAAVQIGYRSGYYQKSAIKNTEGQVVWHWHEGDEG*
DelMOSum2011_1013985123300000115MarineEGGGMNGHTFNISAPALRIRYRSGYYQKSAIKNADGQIVWHWHEGDEG*
DelMOSum2011_1017853813300000115MarineMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0070742_1008254413300005942EstuarineMDTLENVCEGGGMNGHAFNISTPATKIKYRDGFFVKSAIKNEQGQIIWHWKEGDEDE*
Ga0075466_113236133300006029AqueousMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0070744_1023465613300006484EstuarineMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAITNTDGQVVWHWHEGDEDE*
Ga0070749_1069669013300006802AqueousMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQRSAIKNANGQTVWHWHEGDEA*
Ga0075467_1028316833300006803AqueousMDKLENVCEGGGMNGHTFNISNAAVQIRYRTGHYQKSAIKNTDGQTVWNWKEGDSDE*
Ga0075467_1033480623300006803AqueousMDKIAENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0075467_1069504313300006803AqueousMDTLENVCQGGGMNGHTFNISAPALRIRYHTGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0070748_110161453300006920AqueousMDTLENVCQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNADGQTVWHWHEGDE
Ga0070748_113073143300006920AqueousMDKLENVCEGGGMNGHTFNISNAAVQIRYRSGYYQKSAIKNTDGQVVWHWHEGGEDE*
Ga0075468_1009330923300007229AqueousMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEE*
Ga0075468_1012493833300007229AqueousMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQVVWHWHEGDDDE*
Ga0075469_1005671143300007231AqueousMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEDE*
Ga0075469_1006989823300007231AqueousMDTLENICEGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNTEGQVVWHWHEGGEDE*
Ga0075469_1013416323300007231AqueousMDKIAENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEDE*
Ga0070747_104039723300007276AqueousMDTLENICEGGSINGHTFNISHAAVQIGYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0070747_105348063300007276AqueousMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0070747_117131223300007276AqueousMSEHTLENICEGGSINGHTFNISTAAVQIGYRSGYYQKSAIKNTDGQVVWHWHEGDEA*
Ga0070747_123279523300007276AqueousMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHKGDDDE*
Ga0070747_127183833300007276AqueousMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQTVWHWHEGDDDE*
Ga0099847_125273613300007540AqueousRNRNKREPMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0102822_102987943300007558EstuarineMDTLENICQGGGMNGHTFNISTAAVQIGYRTGYYQKSAITNTDGQVVWHWHEGDEDE*
Ga0102823_106482033300007692EstuarineMDTLENICQGGGMNGHTFNISTAAVQIGYRSGYYQKSAIKNTDGQTVWHWHEGDEDE*
Ga0102888_110719223300008995EstuarineMDTLENIRQGSVMNGHTCNISAPALRIRYRTGYYQKSAIKNTDGQVVWHWHEGDEDE*
Ga0102816_115229523300008999EstuarineMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNTDGQVVWHWHEGDEDE*
Ga0102810_117386523300009002EstuarineMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAITNTDGQTVWHWHEGDEDE*
Ga0102811_112969923300009024EstuarineMDTLENICQGGGMNGHTFNISTAAVQIGYKDGYYQKSAIKNTDGQVVWHWHEGDEDE*
Ga0115566_1009342523300009071Pelagic MarineMDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0115549_104369313300009074Pelagic MarineMDTLENICEGGPMSGHTFNISNAAVQIRYRSGHYQKSAIKNTDGQTVWNWKEGDNDE*
Ga0115549_107732213300009074Pelagic MarineMDTLENICQGGGMNGHTFNISTPAVQIKYRTGYYQKSAIKNAEGQIVWHWHEGDEDE*
Ga0115549_108546823300009074Pelagic MarineMDPLENICQGGGMNGHTFNISTAAVQIKYRTGYYQKSAIKNAEGQIVWHWHEGDEDE*
Ga0115550_125647313300009076Pelagic MarineLENICQGGGMNGHTFNISTAAVQIKYRTGYYQKSAIKNAEGQIVWHWHEGDEDE*
Ga0102815_1007591363300009080EstuarineMDTLENICQGGGMNGHTFNISTAAVQIGYKDGYYQKSAIKNTDGQTVWHWHEGDEDE*
Ga0102815_1023716213300009080EstuarineMDTLENVCEGGGMNGHAFNISTPATKIKYRGGFFVKSAIKNEQGQII
Ga0114918_1027701923300009149Deep SubsurfaceMDKIAENICQGGGMNGHFFNISTPALRIRYRTGYYQKSAIKNTDGQTVWHWHEGDEGE*
Ga0115548_102085433300009423Pelagic MarineMDTLENICEGGPMSGHTFNISTAAVQIRYRSGHYQKSAIKNTEGQVVWHWHEGDEDE*
Ga0115548_107979013300009423Pelagic MarineENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0115548_119409023300009423Pelagic MarineTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0115547_113654013300009426Pelagic MarineMLRMLLQTREGEQMDTQENIRQGGAVKGDTFNISTAAVQIKYRSGYYQKSAIKNADGQILWHWHEGDEDE*
Ga0115547_118292023300009426Pelagic MarineQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0115547_125058023300009426Pelagic MarineMDTLENICQGGGMNGHTFNISTAAVQIRYRSGHYQKSAIKNTEGQVVWHWHEGDEDE*
Ga0115545_106464513300009433Pelagic MarineMDTLENICQGGGMNGHTFNISTAAVQIKYRTGYYQKSAIKNAEGQIVWHWHEGDEDE*
Ga0115545_122373923300009433Pelagic MarineRRGNRNKGEPMDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAVKNADGQIVWHWHEGDEDE*
Ga0115546_119651413300009435Pelagic MarineGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0115559_104260373300009438Pelagic MarineMDTLENICQGGGMNGHTFNISTAAVQIRYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0115561_123294033300009440Pelagic MarineMDTLENICQGGGMNGHTFNISAPVVQIKYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0115571_142380123300009495Pelagic MarineDTLENICQGGGMNGHTFNISTASVQIKYRSGYYQKSAIKNADGQTVWHWHEGDEDE*
Ga0115564_1062804933300009505Pelagic MarineMDTLENICQGGGMNGHTFNISTPAVQIKYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0115572_1080616923300009507Pelagic MarineMDTLENICQGGGMNGHTFNISTAAVQIRYRSGYYQKSAIKNAEGQIVWHWHEGDEDE*
Ga0136655_123095223300010316Freshwater To Marine Saline GradientMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNADGQTVWHWHEGDEA*
Ga0129324_1009435913300010368Freshwater To Marine Saline GradientPMDTLENICEGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEA*
Ga0118731_10292894623300010392MarineMDTLENICQGGGMNGHTFNISTAAVQIGYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0129327_1008766223300013010Freshwater To Marine Saline GradientMLRMLQHTREGEQMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEDE*
Ga0129327_1041935913300013010Freshwater To Marine Saline GradientMLRMLQHTREGEQMDTLENICQGGGMNGHTFNISAPAVQIRYRSGYYQKSAIKNADGQIVWHWHEGDEDE*
Ga0206128_104258183300020166SeawaterMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQIVWHWHE
Ga0206127_100823233300020169SeawaterMDTLENICQGGAMNGHTFSISTAAVQIGYKDGYYQKSAIKNAEAQTVWHWHKGDEDE
Ga0206127_110629123300020169SeawaterMDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQIVWHWHEGDEDE
Ga0206129_1007933913300020182SeawaterMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSSIRNTDGQTVWHWHEGGDDE
Ga0206129_1008150533300020182SeawaterMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQTVWHWHEGDDDE
Ga0206129_1008533323300020182SeawaterMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQIVWHWHEGDEDE
Ga0206129_1009419823300020182SeawaterMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNTEGQTVWHWHEGDEDE
Ga0206130_1028015923300020187SeawaterQMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQIVWHWHEGDEDE
Ga0206130_1033043913300020187SeawaterMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHEGDEDE
Ga0206123_1039916913300021365SeawaterMDTLENICQGGGMNGHTFNISAPAVQIGYCTGYYQKSAIKNAEGQIVWHWHEGDEDE
Ga0213861_1017702353300021378SeawaterMDTLENICEGGGMNGHTFKISTPALRIRYRTGYYQKSAIKNAEGQTVWHWHEGDEA
Ga0213861_1035834233300021378SeawaterMDPLENICQGGGMNGHTFKISSPALRIRYRTGYYQKSAIKNAEGQTVWHWHEGDEA
Ga0196887_102486573300022178AqueousMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNTDAQTVWHWHKGGDDE
Ga0196887_103824833300022178AqueousMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHKGDDDE
Ga0196887_104493713300022178AqueousENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNADGQIVWHWHEGDEDE
Ga0196887_114105533300022178AqueousMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQVVWHWHEGDDDE
Ga0224499_1032021523300022206SedimentMDTLENICQGGGMNGHTFNISTAAVQIGYRSGYYQKSAIKNTDGQTVWHWHEGDEDE
Ga0224513_1022531333300022220SedimentMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAITNTDGQVVWHWHEGDEDE
Ga0224513_1033754123300022220SedimentMDTLENICHGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNTNGQTVWHWHEGDEDE
Ga0232119_103775813300023702SeawaterENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHEGDDDE
Ga0228636_105692633300024191SeawaterMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQTVWHWHEGDEDE
Ga0233399_106863713300024231SeawaterMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQTVWHWHEGDEDE
Ga0228655_101756833300024236SeawaterMDTLENVCEGGGMNGHTFNISTPATKIKYRDGFFVKSAIKNEQGQIIWHWKKGDEDE
Ga0210003_110156123300024262Deep SubsurfaceMDKIAENICQGGGMNGHFFNISTPALRIRYRTGYYQKSAIKNTDGQIVWHWHEGDEA
Ga0228623_104620533300024267SeawaterMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHEGD
Ga0228651_110642533300024293SeawaterQMDTLENVCEGGGMNGHTFNISTPATKIKYRDGFFVKSAIKNEQGQIIWHWKKGDEDE
Ga0233398_106453423300024320SeawaterNRNEGEQMDTLENICQGGAMNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQTVWHWHEGDEDE
Ga0244775_1056670913300024346EstuarineMDTLENVCEGGGMNGHAFNISTPATKIKYRDGFFVKSAIKNEQGQIIWHWKEGDEDE
Ga0244775_1084981743300024346EstuarineMDKLENICQGGGMNGHTFNISAPALRIRYRSGYYQKSAITNTDGQTVWHWHEGDEDE
Ga0244775_1086817833300024346EstuarineMDTLENICQGGGMNGHTFNISTAAVQIGYRTGYYQKSAIKNTDGQTVWHWHEGDEDE
Ga0208303_103605723300025543AqueousMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNADGQTVWHWHEGDEA
Ga0208660_101912633300025570AqueousMDTLENICEGGSMNGHTFNISTAAVQIGYRSGYYQKSAIKNTDGQTVWHWHEGDEDE
Ga0208660_107074533300025570AqueousMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEA
Ga0209304_101296743300025577Pelagic MarineMDTLENICEGGPMSGHTFNISTAAVQIRYRSGHYQKSAIKNTEGQVVWHWHEGDEDE
Ga0209304_109338133300025577Pelagic MarineDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQTVWHWHEGDEDE
Ga0209195_104957433300025590Pelagic MarineMDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQTVWHWHEGDEDE
Ga0209195_111724723300025590Pelagic MarineQRKKKQMDTLENICEGGPMSGHTFNISTAAVQIRYRSGHYQKSAIKNTEGQVVWHWHEGDEDE
Ga0209094_105460433300025594Pelagic MarineMDTLENICQGGGMNGHTFNISTAAVQIKYRTGYYQKSAIKNAEGQIVWHWHEGDEDE
Ga0209833_1002004123300025641Pelagic MarineMDTLENICEGGPMSGHTFNISNAAVQIRYRSGHYQKSAIKNTDGQTVWNWKEGDNDE
Ga0208643_108033213300025645AqueousMDTLENICEGGGMNGHTFNISTAAVQIGYRSGYYQKSAIKNTDGQTVWHWHEGDEDE
Ga0208643_110861833300025645AqueousMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEDE
Ga0208643_117568713300025645AqueousMDKIAENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEA
Ga0208134_110219233300025652AqueousMDTLENICQGGAINGHTFNISTAAVQIGYKEGYYQKSAIKNAEGQTVWHWHEGDDDE
Ga0208134_116596633300025652AqueousMDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHEGDEDE
Ga0208134_117303123300025652AqueousMDTLENKCEGGPMSGHTFNISNAAVQIRYRTGHYQKSAIKNAEGQIVWHWHEGDEGDNDE
Ga0209532_115589433300025696Pelagic MarineMDTLENICQGGGMNGHTFNISTPAVQIKYRTGYYQKSAIKNAEGQIVWHWHEGDEDE
Ga0208545_112375523300025806AqueousLRRRTMLRMLQHTREGEQMDTLENICQGGGMNGHTFNISAPALRIRYRTGYYQKSAIKNANGQTVWHWHEGDEE
Ga0209119_130110513300025860Pelagic MarineNKGEQMDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQIVWHWHEGDEDE
Ga0209630_1013723513300025892Pelagic MarineGNRNKGEPMDTLENICQGGGMNGHTFNISTAAVQIKYRSGYYQKSAIKNADGQIVWHWHEGDEDE
Ga0228622_1002600123300026479SeawaterDTLENICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNAEGQTVWHWHEGDEDE
Ga0208304_1003804773300027751EstuarineMDTLENICQGGGMNGHTFNISTAAVQIGYRSGYYQKSAIKNTDGQTVWH
Ga0233401_106813733300028127SeawaterICQGGAVNGHTFNISTAAVQIGYKDGYYQKSAIKNADGQTVWHWHEGDDDE


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