Metagenome / Metatranscriptome Family F087154

Basic Information
Family ID	F087154
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	43 residues
Representative Sequence	PSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVAP
Number of Associated Samples	103
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	91.82 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (51.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (45.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.455 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.86% β-sheet: 2.86% Coil/Unstructured: 74.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04909	Amidohydro_2	69.09
PF01614	IclR	5.45
PF09339	HTH_IclR	4.55
PF01144	CoA_trans	1.82
PF00378	ECH_1	1.82
PF05977	MFS_3	1.82
PF02771	Acyl-CoA_dh_N	0.91
PF08448	PAS_4	0.91
PF07690	MFS_1	0.91
PF13458	Peripla_BP_6	0.91
PF13561	adh_short_C2	0.91
PF00571	CBS	0.91
PF06267	DUF1028	0.91
PF01926	MMR_HSR1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	5.45
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	1.82
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	1.82
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.82
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	1.82
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.91
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
All Organisms	root	All Organisms	48.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
cellular organisms	root	All Organisms → cellular organisms	48.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.82 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.82 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	3.64 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.82 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.64 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.64 %
Arthrobacter deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter deserti	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig264297	Not Available	643	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0569387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300000890\|JGI11643J12802_10251309	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300000891\|JGI10214J12806_10084281	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300000956\|JGI10216J12902_101516650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300004479\|Ga0062595_102459502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	518	Open in IMG/M
3300005168\|Ga0066809_10070333	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005335\|Ga0070666_10549806	Not Available	840	Open in IMG/M
3300005339\|Ga0070660_100448283	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300005364\|Ga0070673_101315316	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005435\|Ga0070714_100684364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	989	Open in IMG/M
3300005455\|Ga0070663_100273848	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300005457\|Ga0070662_101774941	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005615\|Ga0070702_101182224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300005616\|Ga0068852_102344561	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005618\|Ga0068864_101226699	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005713\|Ga0066905_100168809	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300005888\|Ga0075289_1076496	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005897\|Ga0075281_1086292	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005902\|Ga0075273_10065089	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005937\|Ga0081455_10410974	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300006046\|Ga0066652_100517965	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300006057\|Ga0075026_101029801	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300006581\|Ga0074048_10071423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3559	Open in IMG/M
3300006953\|Ga0074063_13358251	Not Available	517	Open in IMG/M
3300009090\|Ga0099827_11296267	Not Available	634	Open in IMG/M
3300009094\|Ga0111539_10218196	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300009098\|Ga0105245_11357746	Not Available	760	Open in IMG/M
3300009098\|Ga0105245_11471047	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300009098\|Ga0105245_13095671	Not Available	515	Open in IMG/M
3300009100\|Ga0075418_11001479	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300009100\|Ga0075418_12493317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	564	Open in IMG/M
3300009147\|Ga0114129_11321494	Not Available	893	Open in IMG/M
3300009147\|Ga0114129_11908287	Not Available	720	Open in IMG/M
3300009148\|Ga0105243_11823422	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009177\|Ga0105248_11176811	Not Available	867	Open in IMG/M
3300009545\|Ga0105237_10919753	Not Available	882	Open in IMG/M
3300009553\|Ga0105249_10513698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1245	Open in IMG/M
3300010375\|Ga0105239_12794962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300010376\|Ga0126381_101282864	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012001\|Ga0120167_1054057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300012360\|Ga0137375_10042061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5067	Open in IMG/M
3300012910\|Ga0157308_10134152	Not Available	772	Open in IMG/M
3300012943\|Ga0164241_10027645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4332	Open in IMG/M
3300012951\|Ga0164300_11034324	Not Available	531	Open in IMG/M
3300012971\|Ga0126369_10516975	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300012985\|Ga0164308_11969015	Not Available	545	Open in IMG/M
3300012987\|Ga0164307_10586110	Not Available	857	Open in IMG/M
3300013100\|Ga0157373_10390509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300013307\|Ga0157372_13052168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300014325\|Ga0163163_10989613	Not Available	904	Open in IMG/M
3300014497\|Ga0182008_10045362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2186	Open in IMG/M
3300015077\|Ga0173483_10812107	Not Available	541	Open in IMG/M
3300015374\|Ga0132255_105582978	Not Available	532	Open in IMG/M
3300016319\|Ga0182033_11634957	Not Available	583	Open in IMG/M
3300017939\|Ga0187775_10413831	Not Available	560	Open in IMG/M
3300018466\|Ga0190268_10709225	Not Available	741	Open in IMG/M
3300019362\|Ga0173479_10805476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter deserti	520	Open in IMG/M
3300020081\|Ga0206354_10880103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300021078\|Ga0210381_10320786	Not Available	562	Open in IMG/M
3300022915\|Ga0247790_10155053	Not Available	591	Open in IMG/M
3300023078\|Ga0247756_1132601	Not Available	501	Open in IMG/M
3300023102\|Ga0247754_1046644	Not Available	999	Open in IMG/M
3300025327\|Ga0209751_10154652	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300025901\|Ga0207688_10435519	Not Available	816	Open in IMG/M
3300025914\|Ga0207671_10736411	Not Available	783	Open in IMG/M
3300025919\|Ga0207657_10948709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300025921\|Ga0207652_10505970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1087	Open in IMG/M
3300025927\|Ga0207687_11549006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300025932\|Ga0207690_10621505	Not Available	883	Open in IMG/M
3300025937\|Ga0207669_10508625	Not Available	965	Open in IMG/M
3300025940\|Ga0207691_10536040	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300025940\|Ga0207691_11072461	Not Available	671	Open in IMG/M
3300025944\|Ga0207661_10934080	Not Available	799	Open in IMG/M
3300025945\|Ga0207679_12086605	Not Available	515	Open in IMG/M
3300025961\|Ga0207712_11898664	Not Available	533	Open in IMG/M
3300025990\|Ga0208527_1015088	Not Available	928	Open in IMG/M
3300026067\|Ga0207678_10294309	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300026067\|Ga0207678_11100660	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300026095\|Ga0207676_10970347	Not Available	836	Open in IMG/M
3300026095\|Ga0207676_12429868	Not Available	521	Open in IMG/M
3300027560\|Ga0207981_1044702	Not Available	808	Open in IMG/M
3300027909\|Ga0209382_10767861	Not Available	1030	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10105385	Not Available	1189	Open in IMG/M
3300028379\|Ga0268266_12175439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300028592\|Ga0247822_10612797	Not Available	873	Open in IMG/M
3300028793\|Ga0307299_10079604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1218	Open in IMG/M
3300028802\|Ga0307503_10466632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300028809\|Ga0247824_10625811	Not Available	649	Open in IMG/M
3300028875\|Ga0307289_10031712	Not Available	2082	Open in IMG/M
3300030619\|Ga0268386_10087933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2415	Open in IMG/M
3300031251\|Ga0265327_10502183	Not Available	523	Open in IMG/M
3300031543\|Ga0318516_10016323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3708	Open in IMG/M
3300031682\|Ga0318560_10236699	Not Available	979	Open in IMG/M
3300031782\|Ga0318552_10316529	Not Available	794	Open in IMG/M
3300031846\|Ga0318512_10354583	Not Available	734	Open in IMG/M
3300031847\|Ga0310907_10713373	Not Available	555	Open in IMG/M
3300031858\|Ga0310892_10377932	Not Available	917	Open in IMG/M
3300031890\|Ga0306925_11435104	Not Available	679	Open in IMG/M
3300031939\|Ga0308174_10579078	Not Available	927	Open in IMG/M
3300031943\|Ga0310885_10774313	Not Available	543	Open in IMG/M
3300031996\|Ga0308176_11263899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784	Open in IMG/M
3300032068\|Ga0318553_10660516	Not Available	547	Open in IMG/M
3300032770\|Ga0335085_12043438	Not Available	580	Open in IMG/M
3300032782\|Ga0335082_10008419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11206	Open in IMG/M
3300032829\|Ga0335070_10858301	Not Available	842	Open in IMG/M
3300033004\|Ga0335084_11784020	Not Available	603	Open in IMG/M
3300033158\|Ga0335077_12206636	Not Available	506	Open in IMG/M
3300033433\|Ga0326726_11269512	Not Available	717	Open in IMG/M
3300033806\|Ga0314865_149692	Not Available	621	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.91%
Host-Associated	Host-Associated	39.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.18%
Plants	Host-Associated → Plants	39.09%
Aquatic	Environmental → Aquatic	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Freshwater	Environmental → Aquatic → Freshwater	1.82%
Sediment	Environmental → Aquatic → Sediment	0.91%
Peat	Environmental → Terrestrial → Peat	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.91%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.91%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005902	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023078	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L066-202C-4	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025990	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_01536750	2140918008	Soil	RSGLPTSVSLIGPPNADWNLIAAGVALQSRLGPVAL
ICChiseqgaiiDRAFT_05693871	3300000033	Soil	SGTGSRSGLPVSXSLIGAPGTEWDLLAWGAALHDRLGTVSP*
JGI11643J12802_102513091	3300000890	Soil	FPGVSLPSGVGSRSGLPTSVSLVGAPGAEWDLLAWGSALQEELGTVSP*
JGI10214J12806_100842811	3300000891	Soil	LPSGVGSRSGLPTSVSLVGAPGAEWDLLAWGSALQEELGTVSP*
JGI10216J12902_1015166502	3300000956	Soil	ALPAGIGRRSGLPVSVSLIGPPGADWDLLAAGTALQTELEPPTP*
Ga0062595_1024595022	3300004479	Soil	FPVVSLPSGVGKRSGLPTSVSLIGAPGADWDVLAWGTALQGELGTVSP*
Ga0066809_100703332	3300005168	Soil	SGVGSRSGLPTSVSLIGPPGAEWDLLAAGAALQDELGEVTPP*
Ga0070666_105498061	3300005335	Switchgrass Rhizosphere	PSGVGARSGLPVSVSLIGAHCTEWELLDWGAALQDRLGTVSPP*
Ga0070660_1004482831	3300005339	Corn Rhizosphere	PVVAFPSGVGSRSALPTGVSLIGAPGADWDLLAAGAALEAELRPMSYFGR*
Ga0070673_1013153161	3300005364	Switchgrass Rhizosphere	PSGLGRRSGLPTSVSLIGRPGADWDLLAAGAALQAELGTVSP*
Ga0070714_1006843641	3300005435	Agricultural Soil	GFPVVALPSGLGRASGLPTSVSLVGPAGADAALLGAGVALQRELGAPQPPP*
Ga0070663_1002738483	3300005455	Corn Rhizosphere	TGFPVVALPSGVGRRSGLPTSVSLIGAPGTEWDLLAWGAALQDRLGTVSP*
Ga0070662_1017749411	3300005457	Corn Rhizosphere	LPSGVGRHSGLPVSVSLIGAPGSDWDLLAWGAALQNELGTVAP*
Ga0070702_1011822241	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GFPVVTLPSGVGRRSGLPVSVSLIGGPGSDWELLAWGVALQDELGTVAPA*
Ga0068852_1023445611	3300005616	Corn Rhizosphere	SALPTGVSLIGAPGADWDLLAAGAALEAELRPMSYFGR*
Ga0068864_1012266991	3300005618	Switchgrass Rhizosphere	HSGLPVSVSLIGPPGADWDLLEWGARLQDELGTVTPP*
Ga0066905_1001688093	3300005713	Tropical Forest Soil	FPVVALPSGVGSRSGLPVSVSLIGAPGSEWDLLGWGVALQEKLGTVSP*
Ga0075289_10764961	3300005888	Rice Paddy Soil	FPVVSLPSGVGRRSGLPVGVSLVGAPGADWDLLAWGAALQDELGTVAP*
Ga0075281_10862922	3300005897	Rice Paddy Soil	SGLPTSVSLIGRRGADWDLLAAGAALQAELGTVSP*
Ga0075273_100650891	3300005902	Rice Paddy Soil	GVGRRSGLPVSVSLVGAPGADWDLLAAGTALQAELGTVSP*
Ga0081455_104109741	3300005937	Tabebuia Heterophylla Rhizosphere	RSGLPVSVSLIGRPGSDWDLLAWGTALQDELGTVAPP*
Ga0066652_1005179653	3300006046	Soil	GLGRRSGLPTSVSLIGRPGSDWDLLAAGAALQAELGAVSP*
Ga0075026_1010298013	3300006057	Watersheds	PSGIGRRSGLPVGVSLIGPAGSDWDLLAAGAILQSTI*
Ga0074048_100714231	3300006581	Soil	GVGRRSGLPVSVSLIARPGADWDLLAWGAALQAKLGTVTP*
Ga0074063_133582511	3300006953	Soil	ALPSGTGSRSVLPTSVSLIGPPHAEWDLLAAGAALQAGLGTRAT*
Ga0099827_112962672	3300009090	Vadose Zone Soil	PSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVAP*
Ga0111539_102181964	3300009094	Populus Rhizosphere	FPVVSLPSGVGSHSGLPVSVSLIGAPGADWDLLSWGAALQDELGTVSP*
Ga0105245_113577462	3300009098	Miscanthus Rhizosphere	VSLPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQNELGTVAP*
Ga0105245_114710472	3300009098	Miscanthus Rhizosphere	VVSLPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQAELGTVSP*
Ga0105245_130956711	3300009098	Miscanthus Rhizosphere	GLPTGVSLVGAPGADWDVLAWGAALQAELGTVAP*
Ga0075418_110014791	3300009100	Populus Rhizosphere	WTGFPVVCLPSGVGSRSGLPVSVSLIGRPHADWDLLAWGAALQDELGTVGPR*
Ga0075418_124933171	3300009100	Populus Rhizosphere	LPSGVGSRSGLPVSVSLIGRPHADWDLLAWGAALQDELGTVEP*
Ga0114129_113214942	3300009147	Populus Rhizosphere	RSGLPTSVSLIGRPGAEWDLLSWGKALQDKLGTVSP*
Ga0114129_119082872	3300009147	Populus Rhizosphere	SGVGQRSGLPVSASLIGAPGADWDLLAWGAALQDELGTVAP*
Ga0105243_118234222	3300009148	Miscanthus Rhizosphere	VSLPSGVGGRSGLPVGVSLIGRPGSEWDLLAWAAALQGELGVVSPP*
Ga0105248_111768111	3300009177	Switchgrass Rhizosphere	GLPVSVSLIGAHRTEWELLDWGAALQDRLGTVSPP*
Ga0105237_109197531	3300009545	Corn Rhizosphere	LPSGVGTRSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVAP*
Ga0105249_105136981	3300009553	Switchgrass Rhizosphere	LPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQAELGTVSP*
Ga0105239_127949621	3300010375	Corn Rhizosphere	FPSGVGSRSALPTGVSLIGAPGADWDLLAAGAALEAELRPVSYFGR*
Ga0126381_1012828642	3300010376	Tropical Forest Soil	VGSRSGLPVSVSLIGAPGADWDLLAWGTALQAELGVPAP*
Ga0120167_10540571	3300012001	Permafrost	VVALPSGVGSRSGLPTSVSLIGPPHADWNLLAAGAELQTVLGIPAP*
Ga0137375_100420611	3300012360	Vadose Zone Soil	LPSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVTP*
Ga0157308_101341521	3300012910	Soil	RSGLPTGVSLVGAPGAEWDLLAWGSALQAELGTVSP*
Ga0164241_100276456	3300012943	Soil	GFPVVALPSGVGTRSGLPTSVSLIGAPGADWDVLAWGMALQAELGTVAP*
Ga0164300_110343241	3300012951	Soil	GVGSRSGLPVSVSLVGAPGVEWDLLGWGAALQDELGTVSPQ*
Ga0126369_105169753	3300012971	Tropical Forest Soil	LPAGVGGRSGLPVSVSLVGRPGSDWDLLAAGAVLQSQLG*
Ga0164308_119690151	3300012985	Soil	PSGVGARSGLPVSVSLIGAPGADWDLLAMGAALQDELGRVTPP*
Ga0164307_105861101	3300012987	Soil	SGLPVSVSLIGAHCTDWELLDWGAALQDRLGTVSPP*
Ga0157373_103905092	3300013100	Corn Rhizosphere	WDWTGFPVVALPSGVGRRSGLPTSVSLIGAPGTEWDLLAWGAALQDRLGTVSP*
Ga0157372_130521682	3300013307	Corn Rhizosphere	FPVVSLPSGVGGRSGMPVGVSIVGGPGTEGRLLEMGIALQDELGVPEPPVR*
Ga0163163_109896131	3300014325	Switchgrass Rhizosphere	GVGRRSGLPTSVSLIGAPGTEWDLLAWGAALQDRLGTVSP*
Ga0182008_100453623	3300014497	Rhizosphere	LTYYWNWTGFPVVASPAGPGPRSGLPTSASLIGRPGADWDLLAWGGAAYGR*
Ga0173483_108121071	3300015077	Soil	RSGLPVSVSLIGAHCTEWELLDWGAALQDRLGTVSPP*
Ga0132255_1055829782	3300015374	Arabidopsis Rhizosphere	RSGLPVSVSLIGAPGSEWDLLDWGAALQDRLGTVSP*
Ga0182033_116349571	3300016319	Soil	RSGLPVSVSLIGAPGADWDLLAWGAALQEALGTVSP
Ga0187775_104138312	3300017939	Tropical Peatland	SGVGAETGLPVSVSLVGAPGSDWELLALGAALQDELGVPSPPLAS
Ga0190268_107092252	3300018466	Soil	VVALPSGVGGRSGLPVGVSLIARNHSETELLEMGIALQDELGVPEPPGF
Ga0173479_108054762	3300019362	Soil	PVVSLPSGLGSASRLPVSVSLIGPPGSEWDLLEWGSTLQAELGMIAP
Ga0206354_108801032	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LGTRSGLPTSVSLIGPPGTEWDLLAAGTVLERELGPVSQ
Ga0210381_103207862	3300021078	Groundwater Sediment	PVVALPSGVGRLSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVAP
Ga0247790_101550532	3300022915	Soil	LPSGVGRHSGLPVSVSLIGAPGSDWDLLAWGAALQNELGTVAP
Ga0247756_11326011	3300023078	Plant Litter	LPSGVGKRSGLPTSVSLIGAPGADWDVLAWGTALQADLGTVTP
Ga0247754_10466441	3300023102	Soil	GFPVVALPSGVGARSGLPTSVSLIGAPGADWDVLAWGTALQAELGTVSP
Ga0209751_101546524	3300025327	Soil	WDWTGFPVVALPSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQAELGTVAP
Ga0207688_104355192	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ALPAGLGRRSGLPVGVSLVGRPGADWDLLAWGAALQDRLGTVSP
Ga0207671_107364111	3300025914	Corn Rhizosphere	LPSGVGTRSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVAP
Ga0207657_109487092	3300025919	Corn Rhizosphere	RSGLPTSVSLIGPPGTEWDLLAAGTVLERELGPVSQ
Ga0207652_105059701	3300025921	Corn Rhizosphere	FPVVAFPSGVGSRSALPTGVSLIGAPGAEWDLLAAGAALEAELRPVSYLDR
Ga0207687_115490061	3300025927	Miscanthus Rhizosphere	VAFPSGVGSRSALPTGVSLIGAPGADWDVLAAGAALEAELRPMSYFGR
Ga0207690_106215051	3300025932	Corn Rhizosphere	VALPSGVGTRSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVAP
Ga0207669_105086252	3300025937	Miscanthus Rhizosphere	RSGLPVSVSLIGAHCTEWELLDWGAALQDRLGTVSPP
Ga0207691_105360401	3300025940	Miscanthus Rhizosphere	GQRSGLPVGVSLIGAPGSDWDLLAAGAALQDELGTVEP
Ga0207691_110724611	3300025940	Miscanthus Rhizosphere	SGLPTGVSLIGAPGADWDVLAWGAALQAELGTVSP
Ga0207661_109340802	3300025944	Corn Rhizosphere	FPVVSLPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQAELGTVSP
Ga0207679_120866051	3300025945	Corn Rhizosphere	SLPSGVGTRSGLPTGVSLVGAPGAEWDLLAWGAALQAELGTVAP
Ga0207712_118986641	3300025961	Switchgrass Rhizosphere	SACRLPVSVSVIGAPGSEWDLLAWGAALQADLGTVSP
Ga0208527_10150881	3300025990	Rice Paddy Soil	SGLPVSVSLVGAPGADWDLLAAGTALQAELGTVSP
Ga0207678_102943093	3300026067	Corn Rhizosphere	IGSRSGLPTGVSLIGAPGADWDLLAAGATLEARLGPVPYAGR
Ga0207678_111006602	3300026067	Corn Rhizosphere	MHPDNTNGIPLIGAPGADWDVLAWGAALQAELGTVSP
Ga0207676_109703472	3300026095	Switchgrass Rhizosphere	SGVGRHSGLPVSVSLIGPPGADWDLLEWGARLQDELGTVTPP
Ga0207676_124298681	3300026095	Switchgrass Rhizosphere	RSGLPVSVSLIGAPGSEWDLLDWGAALQDRLGTVSP
Ga0207981_10447021	3300027560	Soil	PSGVGSRSGLPTSVSLIGPPGAEWDLLAAGAALQDELGEVTPP
Ga0209382_107678612	3300027909	Populus Rhizosphere	FPVVALPSGVGQRSGLPVSVSLIGAPGADWDLLAWGAQLQDELGTVAP
(restricted) Ga0233417_101053853	3300028043	Sediment	VLPSGVGSRSGLPVSVSLIGAPGADWDLLAWGAALQDRLGTVSP
Ga0268266_121754392	3300028379	Switchgrass Rhizosphere	WDWTGFPVVSLPSGVGGRSGMPVGVSIVGGPGTEGRLLEMGIALQDELGVPEPPVR
Ga0247822_106127971	3300028592	Soil	GFPVVSLPSGVGKRSGLPTSVSLIGAPGADWDVLAWGTALQGELGTVSP
Ga0307299_100796041	3300028793	Soil	SGLPVSVSLVGAQGADWDLLDWGAKLQDELGTVSPP
Ga0307503_104666321	3300028802	Soil	PVVALPSGIGSRSGLPASVSLIGPPNAEWDLLAAGSALQERLGTANLAAI
Ga0247824_106258111	3300028809	Soil	FPVVSLPSGVGTRSGLPTGVSLVGAPGAEWDLLAWGAGLQAELGTVSP
Ga0307289_100317121	3300028875	Soil	TGFPVVSLPSGVGRHSRLPVSVSLVGAPGADWDLLGWGAKLQDELGTVSPP
Ga0268386_100879331	3300030619	Soil	CLPSGVGSRSGLPVSVSLIGRPHADWDLLAWGAALQDELGTVEP
Ga0265327_105021831	3300031251	Rhizosphere	SGVGSRSGLPVSVSLVGAPGAEWDLLGWGGALQAELGTVSP
Ga0318516_100163236	3300031543	Soil	DWTGFPVVALPSGVGARSGLPVSVSLIGAPGADWDLLAWGAALQEALGTVSP
Ga0318560_102366991	3300031682	Soil	PSGVGSRSGLPVSVSMIGAPGTDWDLLAWGTALQDELGAPAP
Ga0318552_103165292	3300031782	Soil	PVVALPSGVGSRSGLPVSVSLVAAPGAEWDLLAWGASLQDELGVPST
Ga0318512_103545832	3300031846	Soil	PSGVGSRSGLPVSVSLVAAPGAEWDLLAWGASLQDELGVPST
Ga0310907_107133731	3300031847	Soil	LPSGVGARSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVSP
Ga0310892_103779321	3300031858	Soil	PSGVGRRSGLPTSVSLIGAPGADWDVLAWGTALQVELGTVTP
Ga0306925_114351042	3300031890	Soil	GVGARSGLPVSVSLIGAPGADWDLLAWGAALQEALGTVSP
Ga0308174_105790781	3300031939	Soil	SRSGLPTSVSLIGPAGRDFDLLGAGVALESELGSVAA
Ga0310885_107743132	3300031943	Soil	PVVALPSGVGRRSGLPTSVSLIGAPGADWDVLAWGTALQVELGTVTP
Ga0308176_112638993	3300031996	Soil	FPSGVGSRSALPTGVSLIGAPGADWDLLAAGAALEAELRPMSYFGR
Ga0318553_106605161	3300032068	Soil	PSGVGSRSGLPVSVSLIGARGADWDLLAWGRSLEAALGSVTP
Ga0335085_120434382	3300032770	Soil	VALPSGVGSRSGLPASVSLIGPAGADWNLLAAGAALQAELGTVSP
Ga0335082_1000841912	3300032782	Soil	SGLPTSVSLIGARGADWDLLAWGSALEAELGEVTPP
Ga0335070_108583011	3300032829	Soil	AVALPSGTGPRSGLPASVSLIGPPGADWDLLAAGAALQDALG
Ga0335084_117840202	3300033004	Soil	GVGSRSGLPVSVSLIGAPGSDWELLAWGAALQANLDTVAP
Ga0335077_122066362	3300033158	Soil	VALPAGVGSRSGLPVSVSLIGAPGSDFDLLAWGSALERELGSVSPS
Ga0326726_112695121	3300033433	Peat Soil	GVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVTP
Ga0314865_149692_498_620	3300033806	Peatland	RSGLPVGVSLVGPPGRDFDALAAGVELQGELGPIAAALPR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters