Metagenome / Metatranscriptome Family F087149

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087149
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	79 residues
Representative Sequence	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Number of Associated Samples	84
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.76 %
% of genes near scaffold ends (potentially truncated)	70.00 %
% of genes from short scaffolds (< 2000 bps)	85.45 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.273 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.46% β-sheet: 0.00% Coil/Unstructured: 76.54%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF14681	UPRTase	9.09
PF03401	TctC	1.82
PF02163	Peptidase_M50	1.82
PF05199	GMC_oxred_C	1.82
PF04430	DUF498	1.82
PF13419	HAD_2	1.82
PF02104	SURF1	0.91
PF00805	Pentapeptide	0.91
PF00430	ATP-synt_B	0.91
PF07813	LTXXQ	0.91
PF13302	Acetyltransf_3	0.91
PF04199	Cyclase	0.91
PF11798	IMS_HHH	0.91
PF12471	GTP_CH_N	0.91
PF00034	Cytochrom_C	0.91
PF13683	rve_3	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.64
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	1.82
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.82
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.82
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	1.82
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.91
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.91
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.91
COG3346	Cytochrome oxidase assembly protein ShyY1	Posttranslational modification, protein turnover, chaperones [O]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.64 %
Unclassified	root	N/A	6.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.64 %
Unclassified	root	N/A	6.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.64 %
Unclassified	root	N/A	6.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.73 %
Unclassified	root	N/A	6.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	63.64 %
Unclassified	root	N/A	6.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	41.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.00 %
Unclassified	root	N/A	6.36 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	41.82 %
Unclassified	root	N/A	6.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.64 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	41.82 %
Unclassified	root	N/A	6.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.73 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	41.82 %
Unclassified	root	N/A	6.36 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.82 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	41.82 %
Unclassified	root	N/A	6.36 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.91 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.91 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000651\|AP72_2010_repI_A10DRAFT_1005895	All Organisms → cellular organisms → Bacteria → Proteobacteria	1649	Open in IMG/M
3300002917\|JGI25616J43925_10010824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3998	Open in IMG/M
3300005332\|Ga0066388_100102423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3331	Open in IMG/M
3300005332\|Ga0066388_106851868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300005536\|Ga0070697_100398081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1195	Open in IMG/M
3300006606\|Ga0074062_12561527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300006852\|Ga0075433_10307404	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300006904\|Ga0075424_100569704	Not Available	1209	Open in IMG/M
3300007255\|Ga0099791_10003845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6131	Open in IMG/M
3300007258\|Ga0099793_10201411	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300009098\|Ga0105245_12301057	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
3300009143\|Ga0099792_10554850	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300009147\|Ga0114129_13206723	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300009162\|Ga0075423_10132428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2617	Open in IMG/M
3300009792\|Ga0126374_10246207	Not Available	1164	Open in IMG/M
3300009792\|Ga0126374_10547680	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300010043\|Ga0126380_10080084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1887	Open in IMG/M
3300010046\|Ga0126384_11262827	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300010046\|Ga0126384_12015811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300010047\|Ga0126382_10081457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2026	Open in IMG/M
3300010047\|Ga0126382_10129061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1693	Open in IMG/M
3300010048\|Ga0126373_10107087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2595	Open in IMG/M
3300010048\|Ga0126373_10218921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1856	Open in IMG/M
3300010048\|Ga0126373_10576106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300010358\|Ga0126370_11057183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300010358\|Ga0126370_11400099	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300010359\|Ga0126376_10076086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2477	Open in IMG/M
3300010360\|Ga0126372_11920465	Not Available	637	Open in IMG/M
3300010362\|Ga0126377_10617237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300010366\|Ga0126379_10305287	Not Available	1600	Open in IMG/M
3300010366\|Ga0126379_10484568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300010366\|Ga0126379_11408359	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300010366\|Ga0126379_12383240	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300010396\|Ga0134126_10953677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	962	Open in IMG/M
3300010398\|Ga0126383_12626859	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300011106\|Ga0151489_1437612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300011270\|Ga0137391_11362089	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300012180\|Ga0153974_1018469	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300012198\|Ga0137364_11152860	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300012200\|Ga0137382_10335323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1059	Open in IMG/M
3300012202\|Ga0137363_10157771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1788	Open in IMG/M
3300012205\|Ga0137362_10818659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300012206\|Ga0137380_11603943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300012211\|Ga0137377_10884260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300012349\|Ga0137387_10736116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300012948\|Ga0126375_10027455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2768	Open in IMG/M
3300012948\|Ga0126375_11664580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300012971\|Ga0126369_10213247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1872	Open in IMG/M
3300012971\|Ga0126369_13223524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300015374\|Ga0132255_102101384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	860	Open in IMG/M
3300016294\|Ga0182041_12236406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300016357\|Ga0182032_10218482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1462	Open in IMG/M
3300016357\|Ga0182032_11284688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300016371\|Ga0182034_11000426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300016422\|Ga0182039_10298881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300016445\|Ga0182038_10403048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1147	Open in IMG/M
3300021560\|Ga0126371_13127474	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300025929\|Ga0207664_11964851	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300027527\|Ga0209684_1041109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300027874\|Ga0209465_10220677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	947	Open in IMG/M
3300031544\|Ga0318534_10066852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2031	Open in IMG/M
3300031545\|Ga0318541_10059528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1981	Open in IMG/M
3300031545\|Ga0318541_10111850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1476	Open in IMG/M
3300031545\|Ga0318541_10226210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1037	Open in IMG/M
3300031545\|Ga0318541_10247558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300031561\|Ga0318528_10533053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300031561\|Ga0318528_10706263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300031572\|Ga0318515_10177597	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300031640\|Ga0318555_10172603	Not Available	1161	Open in IMG/M
3300031682\|Ga0318560_10283128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300031713\|Ga0318496_10358643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300031719\|Ga0306917_10145710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1752	Open in IMG/M
3300031719\|Ga0306917_10431103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300031744\|Ga0306918_10135183	Not Available	1804	Open in IMG/M
3300031747\|Ga0318502_10729254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300031763\|Ga0318537_10117715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	986	Open in IMG/M
3300031765\|Ga0318554_10666588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300031769\|Ga0318526_10019252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2364	Open in IMG/M
3300031819\|Ga0318568_10526501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300031832\|Ga0318499_10112717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1055	Open in IMG/M
3300031880\|Ga0318544_10315964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300031890\|Ga0306925_11569679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300031897\|Ga0318520_10592994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300031910\|Ga0306923_12507623	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300031941\|Ga0310912_10632819	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300031941\|Ga0310912_10993982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300031942\|Ga0310916_10101979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2307	Open in IMG/M
3300031942\|Ga0310916_10518035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300031942\|Ga0310916_11125336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300031942\|Ga0310916_11430762	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300031945\|Ga0310913_10068684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2344	Open in IMG/M
3300031945\|Ga0310913_11239016	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300031946\|Ga0310910_10585860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300031947\|Ga0310909_10130534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2049	Open in IMG/M
3300031959\|Ga0318530_10018748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2348	Open in IMG/M
3300031981\|Ga0318531_10153024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300032001\|Ga0306922_10809219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	979	Open in IMG/M
3300032025\|Ga0318507_10400732	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300032043\|Ga0318556_10315274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300032059\|Ga0318533_10431452	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300032059\|Ga0318533_11422119	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300032063\|Ga0318504_10519710	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300032064\|Ga0318510_10428176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300032068\|Ga0318553_10755559	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300032076\|Ga0306924_10169056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2507	Open in IMG/M
3300032076\|Ga0306924_10939881	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300032090\|Ga0318518_10281595	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300032094\|Ga0318540_10421918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300032094\|Ga0318540_10486945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.64%
Host-Associated	Host-Associated	6.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.64%
Plants	Host-Associated → Plants	5.45%
Fungi	Host-Associated → Fungi	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%
Mycelium	Host-Associated → Fungi → Mycelium	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.27%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A10DRAFT_10058952	3300000651	Forest Soil	MVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK*
JGI25616J43925_100108241	3300002917	Grasslands Soil	SGALGIGECGWVTPGVAPEKKLVNRLANEGESSDDPTLEASEQPHSAAALTTKPATRRRLPVRSRTFP*
Ga0066388_1001024234	3300005332	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGGCGWVTLGVALEKKLANRLVNEGELSDDSTLEASEQPDSIAALTKSAAAQRGPRRAKSK*
Ga0066388_1068518681	3300005332	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLVKRLVNEGELSDDPTLEASEQPDSIAALTIIAAAQRGPRRAKSK*
Ga0070697_1003980813	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LAAIFIVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKFANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGRRRAKSK*
Ga0074062_125615271	3300006606	Soil	GHSTSGADGVGECSWVTPGVAPEKKLAKRLVNEGELSDDPTLEASEQPDSIAALTISAAVQRAPRRAKSK*
Ga0075433_103074041	3300006852	Populus Rhizosphere	SVVLAAIFMVDAPVRISTPGHSTSGADGVGECGWTTPGIASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRGAKSK*
Ga0075424_1005697041	3300006904	Populus Rhizosphere	AAIFMVDAPVRISTPGHSTSGADEVGECSWVTPGVAPEKKLAKRLVNEGELSDDPTLEASEQPDSIAALTISAAVQRGPRRAKSK*
Ga0099791_100038451	3300007255	Vadose Zone Soil	MVDAPLRISTPGHSTSGADGVGECGCVTPGVAPVKKLVTRLVNEGELSDDPTLEASEQPDSMASLTTSTP
Ga0099793_102014112	3300007258	Vadose Zone Soil	MVEAPVRISTPGHSTSGALGIGECGWVTPGVAPEKKLVNRLANEGESSDDPTLEASEQPHSAAALTTKPVTRRRLPVRSRTFP*
Ga0105245_123010572	3300009098	Miscanthus Rhizosphere	MVDAPVRISTPGHSTSGVDGVGGCGWVTLGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK*
Ga0099792_105548502	3300009143	Vadose Zone Soil	MVDAPLRISTPGHSTSGADGVGECGCVTPGVAPVKKLVTRLVNEGELSDDPTLEASEQPDSMAALTISAPARHQPR
Ga0114129_132067231	3300009147	Populus Rhizosphere	MVDAPVRISTPGHSTSGADGVGECGWTTPGIASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRR
Ga0075423_101324284	3300009162	Populus Rhizosphere	LAAIFIVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKFANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRGAKSK*
Ga0126374_102462072	3300009792	Tropical Forest Soil	MVDAPVRISTPGHSASGVGEWGWATPGVASEKKLKLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK*
Ga0126374_105476802	3300009792	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDTIAALTISPAARTRPRF
Ga0126380_100800842	3300010043	Tropical Forest Soil	MVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK*
Ga0126384_112628272	3300010046	Tropical Forest Soil	MVDAPVRISTPGHSASGVGEWGWATPGVASEKKLKLANEGELSDDPTLEASEQPDSIAALTISAAARREPQRAKSK*
Ga0126384_120158111	3300010046	Tropical Forest Soil	TPGHSISGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK*
Ga0126382_100814572	3300010047	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGPRRAKSK*
Ga0126382_101290614	3300010047	Tropical Forest Soil	STSGADGVGECGCVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARRGPRRAKSK*
Ga0126373_101070874	3300010048	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGEPSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKSK*
Ga0126373_102189213	3300010048	Tropical Forest Soil	MVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP*
Ga0126373_105761061	3300010048	Tropical Forest Soil	MVDAPVRISTPGHSMSGADGVGECGCVTPGVAPVKKLVKRLVNEGELSDDPTLEASEQPDSMAALTIST
Ga0126370_110571831	3300010358	Tropical Forest Soil	VRISTPGHSTSGADGVGGCGWVTLGVALEKKLANRLVNEGELSDDSTLEASEQPDSIAAPTKSAAAQRGPRRAKSK*
Ga0126370_114000992	3300010358	Tropical Forest Soil	MVDAPVRISTPGHSTSGTDSVGECGCVTPGVAPEKKLANRLANEGEPSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKSK*
Ga0126376_100760863	3300010359	Tropical Forest Soil	MVDAPVRISTPGHSASGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP*
Ga0126372_119204651	3300010360	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLMLANRLANEGELSDDPTLEASEQPDSIAAPSGSALTIFWS*
Ga0126377_106172372	3300010362	Tropical Forest Soil	MVDAPVRISTPGHSASGADGVGEWGWATPGVALEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP*
Ga0126379_103052873	3300010366	Tropical Forest Soil	PVRISTPGHSTSGADGVGECGWVTPGVAPERKLANRLANEGELSDGPTLEASEQPDSIAALTISAAARRGPRRAKSK*
Ga0126379_104845683	3300010366	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGEPSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKNK*
Ga0126379_114083591	3300010366	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSDGPTLEASEQPDSIAALTI
Ga0126379_123832402	3300010366	Tropical Forest Soil	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKRLVNLLANEGELSDEPTLEASEQPDSIAALTISPAAR
Ga0134126_109536773	3300010396	Terrestrial Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLTNEGELSDDPTLEASEQPDNIAALTI
Ga0126383_126268591	3300010398	Tropical Forest Soil	MVDAPVRISTPGHSTSGTDGVGECGWVTPGVAPEKKLANRVANEGELSDDPTLEASEQPDSIAALTISAAA
Ga0124844_12520582	3300010868	Tropical Forest Soil	MSGADGVGECGCVTPGVAPVNKLVKRLVNEGELSDDPTLEASEQPDSMAALTISAPARHPPRSRSEFP*
Ga0151489_14376121	3300011106	Soil	MVDAPLRISTPGHSTSGADGVGECGCVTPGVAPVKKLVTRLVNEGELSDDPTLEASEQPDSMAALTISAPARHQPRSRSEFPGRIEIT
Ga0137391_113620891	3300011270	Vadose Zone Soil	MFKVDAPVRMWTPGHSMSGAEGVGDAGWVTPGFAPEKKLENRLPNEGESSADPTLEADEQPDSATALTSSTAARRTL
Ga0153974_10184693	3300012180	Attine Ant Fungus Gardens	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAERGPRRAKSK*
Ga0137364_111528601	3300012198	Vadose Zone Soil	RSPAVGSVAVAAIFKVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAARREPRRAKSK*
Ga0137382_103353233	3300012200	Vadose Zone Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPVKKLVTRLVNEGELSDDPTLEASEQPDSMAALTISAPARHQPRARSEF
Ga0137363_101577713	3300012202	Vadose Zone Soil	MVEAPVRISTPGHSTSGALGIGECGWVTPGVAPEKKLVNRLANEGESSDDPTLEASEQPHSAAALTTKPATRRRLPVRSRTFP*
Ga0137362_108186591	3300012205	Vadose Zone Soil	PVRISTPGHSTSGADGVGECGWVTPGVAPEKKFANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGRRRAKSK*
Ga0137380_116039432	3300012206	Vadose Zone Soil	MVDAPLRISTPGHSTSGADGVGECGCVTPGVAPEKKLVKRLVNEGELSDDPTLEASEQPDSMAALTISAPARHQPRSRSEFPGRI
Ga0137377_108842601	3300012211	Vadose Zone Soil	PVRISTPGHSTSGADGVGECGWVTPGVAPEKKFANRLANENELSDDPTLEASEQPDSIAALTISAAARRGPRWAKSK*
Ga0137387_107361161	3300012349	Vadose Zone Soil	SPRGQSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGPRWAKSK*
Ga0126375_100274552	3300012948	Tropical Forest Soil	MVDAPVRISTPGHSASGADGVGEWGWATPGVALEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK*
Ga0126375_116645802	3300012948	Tropical Forest Soil	PGHSASGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPDGRRASDSARSNARN*
Ga0126369_102132471	3300012971	Tropical Forest Soil	HSASGADGVGEWGWATPCVASEKKLKLANRLANEGELSDDSTLEASEQPDSIAALTKSAAAQRGPRRAKSK*
Ga0126369_132235241	3300012971	Tropical Forest Soil	MVDAPVRISTPGHSMSGADGVGECGCVTPGVAPVNKLVKRLVNEGELSDDPTLEASEQPDSMAALTISTPARHPPRSRSEFPGPIEITR
Ga0132255_1021013841	3300015374	Arabidopsis Rhizosphere	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLVKRLVNEGELSDDPTLEASEQPDSMAALTISAPARHQPPSRSEFPGRI
Ga0182041_122364061	3300016294	Soil	AALAAIFIVDAPVRISTPGHSTSGADGVGGCGWVTPGVALEKKLADRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRTKSK
Ga0182032_102184823	3300016357	Soil	LAAIFMVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARREPRRAKSK
Ga0182032_112846881	3300016357	Soil	ISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSGDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0182034_110004261	3300016371	Soil	AAIFMVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSGDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0182039_102988811	3300016422	Soil	STSGADGVGECGWVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARRGPRRAKSK
Ga0182038_104030482	3300016445	Soil	SVVLAAIFMVDAPVRISTPGHSTSGADGVGECSWVTPGVAPEKKLAKRLVNEGELSDDPTLEASEQPDSIAALTISAAVQRGPRRAKSK
Ga0126371_131274741	3300021560	Tropical Forest Soil	LAAIFMVDAPVRISTPGHSASGADGVGEWGWATPGVALEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0207664_119648511	3300025929	Agricultural Soil	VGSVVLAAIFMVDAPVRISTPGHSTSGADEVGECSWVTPGVAPEKKLAKRLVNEGELSDDPTLEASEQPDSIAALTISAAVQRGPRRAKSK
Ga0209684_10411091	3300027527	Tropical Forest Soil	PVRISTPGHSMSGADGVGECGCVTPGVAPVNKLVKRLVNEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0209465_102206771	3300027874	Tropical Forest Soil	SSSGADGVGECGCVTPGVAPEKKLANRLANEGEPSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKNK
Ga0318534_100668524	3300031544	Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKSK
Ga0318541_100595284	3300031545	Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0318541_101118503	3300031545	Soil	VLAAIFMVDAPVRISTPGHSTSGADGVGECSWVTPGVAPEKKLAKRLVNEGELSDDPTLEASEQPDSIAALTISAAVQRGPRRAKSK
Ga0318541_102262102	3300031545	Soil	TPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKSK
Ga0318541_102475582	3300031545	Soil	VLLAAIFMVDAPVRISTPGHSTSGADGVGECGCVTPGVALEKKLANRLTNEGELSDDSTLEASEHPDNIAALTISAAAQRGPRRAKSK
Ga0318528_105330531	3300031561	Soil	IFIVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSGDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0318528_107062631	3300031561	Soil	IFMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0318515_101775971	3300031572	Soil	VVLTAIFMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0318555_101726031	3300031640	Soil	DAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0318560_102831281	3300031682	Soil	AAIFMVDAPVRISTPGHSTSGANGVGECGWVTPGVAPEKKLANRLANEGELSDDSTLEASEQPDSIAALTISAAARRGPRRTKSK
Ga0318496_103586431	3300031713	Soil	PGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGEPSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKSK
Ga0306917_101457101	3300031719	Soil	STSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0306917_104311031	3300031719	Soil	RISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0306918_101351834	3300031744	Soil	GHSTSGADGVGECGWVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARRGPRRAKSK
Ga0318502_107292541	3300031747	Soil	RISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0318537_101177151	3300031763	Soil	VRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0318554_106665882	3300031765	Soil	FMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0318526_100192521	3300031769	Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGEPSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKSK
Ga0318568_105265011	3300031819	Soil	AAIFMVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARRGPRRAKSK
Ga0318499_101127172	3300031832	Soil	IFMVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEAVEQPDSIAALTISAAAQRGPQRAKSK
Ga0318544_103159641	3300031880	Soil	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0306925_115696791	3300031890	Soil	TPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0318520_105929941	3300031897	Soil	AIFMVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSGDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0306923_125076231	3300031910	Soil	SVLLAAIFMVDAPVRISTPGHSTSGADGVGECGCVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARRRPRRAKSK
Ga0310912_106328191	3300031941	Soil	RKSPAVASVLLAAIFMVDAPVRISTPGHSTSGADGVGECGCVTPGVALEKKLANRLTNEGELSDDSTLEASEHPDNIAALTISAAAQRGPRRAKSK
Ga0310912_109939821	3300031941	Soil	DAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARRGPRRAKSK
Ga0310916_101019792	3300031942	Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVALEKKLANRLTNEGELSDDSTLEASEHPDNIAALTISAAAQRGPRRAKSK
Ga0310916_105180351	3300031942	Soil	VASVVLAAIFMVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0310916_111253361	3300031942	Soil	IFMVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0310916_114307622	3300031942	Soil	VVLAAIFMVDAPVRISTPGHSTSGGDGVGECGCVTPGFAPEKKLANRLANEGELSDDPTLEASEQPDNIATLIISAAARRGPRR
Ga0310913_100686841	3300031945	Soil	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSGDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0310913_112390162	3300031945	Soil	LTAIFMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0310910_105858603	3300031946	Soil	HSTSGAEGVGECSWVTPGVAPEKKLAKRLVNEGELSDDPTLEASEQPDSIAALTISAAVQRGPRRAKSK
Ga0310909_101305344	3300031947	Soil	ISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGESSDDPTLEASEQPDNIAALTISAAARRGPRRAKSK
Ga0318530_100187481	3300031959	Soil	STPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0318531_101530241	3300031981	Soil	GQSTSGADGVGECGWVTPGVAPEKKLANRVANEGELSDDPTLEASEQPDSIAALTISAAARRVPRRAKSK
Ga0306922_108092192	3300032001	Soil	TSGADGVGECGCVTPGVAPEKKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0318507_104007322	3300032025	Soil	LAAIFMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRAKSK
Ga0318556_103152741	3300032043	Soil	IFMVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0318533_104314521	3300032059	Soil	AIFMVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0318533_114221192	3300032059	Soil	MVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLATRLANEGELSDDPTLEASEQPHSIAALTISAAARRGP
Ga0318504_105197102	3300032063	Soil	LAAIFMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP
Ga0318510_104281761	3300032064	Soil	IFMVDAPVRISTPGHSTSGADGVGECSWVTPGVAPEKKLAKRLVNEGELSDDPTLEASEQPDSIAALTISAAVQRGPRRAKSK
Ga0318553_107555592	3300032068	Soil	LAAIFMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLQASEQPDSIAALTISAAAQRGP
Ga0306924_101690563	3300032076	Soil	MVDAPVRISTPGHSTSGADGVGECGCVTPGVALEKKLANRLTNEGELSDDSTLEASEHPDNIAALTISAAARRGPRRAKSK
Ga0306924_109398811	3300032076	Soil	MFMVDAPVRISTPGHSTSGADGVGGCGWVTPGVALEKKLADRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGPRRTKSK
Ga0318518_102815951	3300032090	Soil	MVDAPVRISTPGHSTSGADGVGECGWATPGVASEKKLKLANRLANEGELSDGPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0318540_104219181	3300032094	Soil	FMVDAPVRISTPGHSTSGADGVGECGWVTPGVAPEKKLANRLANEGELSGDPTLEASEQPDSIAALTISAAARRGPRRAKSK
Ga0318540_104869451	3300032094	Soil	AAIFMVDAPVRISTPGHSASGADGVGEWGWATPGVASEKKLKLANRLANEGELSDDPTLEASEQPDSIAALTISAAAQRGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087149

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences