NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087100

Metagenome Family F087100

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087100
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 78 residues
Representative Sequence VSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Number of Associated Samples 76
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.64 %
% of genes near scaffold ends (potentially truncated) 87.27 %
% of genes from short scaffolds (< 2000 bps) 80.91 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.091 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(17.273 % of family members)
Environment Ontology (ENVO) Unclassified
(49.091 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(48.182 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 63.01%    β-sheet: 0.00%    Coil/Unstructured: 36.99%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF08299Bac_DnaA_C 20.91
PF08774VRR_NUC 10.91
PF04448DUF551 3.64
PF05272VirE 1.82
PF00145DNA_methylase 1.82
PF04851ResIII 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 20.91
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 1.82
COG5545Predicted P-loop ATPase and inactivated derivativesMobilome: prophages, transposons [X] 1.82

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.27 %
UnclassifiedrootN/A2.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2222084011|2225761471Not Available17024Open in IMG/M
2222084011|2225762228All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2041Open in IMG/M
2222084011|2225762293All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Robiginitalea → Robiginitalea biformata3297Open in IMG/M
2222084011|2225762369All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2319Open in IMG/M
2222084011|2225762379All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1143Open in IMG/M
3300000736|JGI12547J11936_1023696All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1437Open in IMG/M
3300001267|B570J13875_100653All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2150Open in IMG/M
3300002161|JGI24766J26685_10042889All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1037Open in IMG/M
3300002384|B570J29636_1010781All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales551Open in IMG/M
3300005805|Ga0079957_1204986All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales948Open in IMG/M
3300006641|Ga0075471_10015702All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4555Open in IMG/M
3300006802|Ga0070749_10617978All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300006863|Ga0075459_1058152All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales653Open in IMG/M
3300007177|Ga0102978_1042440All Organisms → cellular organisms → Bacteria2551Open in IMG/M
3300007593|Ga0102918_1178820All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales643Open in IMG/M
3300007617|Ga0102897_1121530All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales802Open in IMG/M
3300007642|Ga0102876_1120752All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales706Open in IMG/M
3300007973|Ga0105746_1143762All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales801Open in IMG/M
3300008266|Ga0114363_1040590All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1903Open in IMG/M
3300008266|Ga0114363_1047993All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2268Open in IMG/M
3300008266|Ga0114363_1076636All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1257Open in IMG/M
3300008266|Ga0114363_1125817Not Available2183Open in IMG/M
3300008266|Ga0114363_1168847All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1305Open in IMG/M
3300008448|Ga0114876_1213175All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales639Open in IMG/M
3300008450|Ga0114880_1073967All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1377Open in IMG/M
3300008450|Ga0114880_1211402All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales640Open in IMG/M
3300008450|Ga0114880_1228354All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales599Open in IMG/M
3300008450|Ga0114880_1233457All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales588Open in IMG/M
3300009068|Ga0114973_10425222All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales693Open in IMG/M
3300009146|Ga0105091_10462874All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales639Open in IMG/M
3300009158|Ga0114977_10235836All Organisms → Viruses → Predicted Viral1061Open in IMG/M
3300009163|Ga0114970_10631263All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales574Open in IMG/M
3300009168|Ga0105104_10080427All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1756Open in IMG/M
3300009180|Ga0114979_10375388All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales835Open in IMG/M
3300009181|Ga0114969_10233834All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1112Open in IMG/M
3300009187|Ga0114972_10171777All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1359Open in IMG/M
3300010354|Ga0129333_10207788All Organisms → cellular organisms → Bacteria1778Open in IMG/M
3300010354|Ga0129333_11384984All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales579Open in IMG/M
3300010354|Ga0129333_11415919All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales571Open in IMG/M
3300010370|Ga0129336_10086522All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1846Open in IMG/M
3300010370|Ga0129336_10519745All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales640Open in IMG/M
3300010370|Ga0129336_10583946All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales597Open in IMG/M
3300010885|Ga0133913_11656084All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1611Open in IMG/M
3300013004|Ga0164293_10295295All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1125Open in IMG/M
3300013004|Ga0164293_10340717All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1026Open in IMG/M
(restricted) 3300013127|Ga0172365_10262577All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1038Open in IMG/M
(restricted) 3300013131|Ga0172373_10146187All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1687Open in IMG/M
(restricted) 3300013131|Ga0172373_10345198All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales944Open in IMG/M
(restricted) 3300013133|Ga0172362_10761264All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales647Open in IMG/M
3300013372|Ga0177922_10288909All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales564Open in IMG/M
3300013372|Ga0177922_10686855All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales820Open in IMG/M
3300013372|Ga0177922_10988830All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1083Open in IMG/M
3300017707|Ga0181363_1091997All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales513Open in IMG/M
3300017747|Ga0181352_1143968All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales634Open in IMG/M
3300017747|Ga0181352_1203374All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales509Open in IMG/M
3300017777|Ga0181357_1248172All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales619Open in IMG/M
3300017778|Ga0181349_1015976All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales3083Open in IMG/M
3300017784|Ga0181348_1190485All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales742Open in IMG/M
3300017785|Ga0181355_1203770All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales776Open in IMG/M
3300017785|Ga0181355_1218326All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales742Open in IMG/M
3300017785|Ga0181355_1357608All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales536Open in IMG/M
3300020084|Ga0194110_10830984All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales557Open in IMG/M
3300020506|Ga0208091_1006909All Organisms → Viruses → Predicted Viral1483Open in IMG/M
3300020506|Ga0208091_1022198All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales733Open in IMG/M
3300020536|Ga0207939_1034107All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales657Open in IMG/M
3300020553|Ga0208855_1054064All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales520Open in IMG/M
3300021962|Ga0222713_10100402All Organisms → Viruses → Predicted Viral2075Open in IMG/M
3300021962|Ga0222713_10862407All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales500Open in IMG/M
3300022752|Ga0214917_10296810All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales721Open in IMG/M
3300023179|Ga0214923_10060323All Organisms → cellular organisms → Bacteria2805Open in IMG/M
3300023179|Ga0214923_10466294All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes629Open in IMG/M
3300024343|Ga0244777_10155861All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1474Open in IMG/M
3300025445|Ga0208424_1046853All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales537Open in IMG/M
3300025635|Ga0208147_1020297All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1785Open in IMG/M
3300025635|Ga0208147_1049287All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300025889|Ga0208644_1311087All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales620Open in IMG/M
3300025896|Ga0208916_10303853All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales695Open in IMG/M
3300027127|Ga0255071_1036027All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales736Open in IMG/M
3300027225|Ga0208025_1038685All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300027227|Ga0208929_1090232All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales576Open in IMG/M
3300027659|Ga0208975_1211883All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales513Open in IMG/M
3300027693|Ga0209704_1191157All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales596Open in IMG/M
3300027805|Ga0209229_10242518All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales802Open in IMG/M
3300027805|Ga0209229_10348198All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales648Open in IMG/M
3300027963|Ga0209400_1374681All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales519Open in IMG/M
3300027972|Ga0209079_10206376All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales672Open in IMG/M
3300031758|Ga0315907_10119729All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2247Open in IMG/M
3300031787|Ga0315900_10998679All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales550Open in IMG/M
3300031857|Ga0315909_10066422All Organisms → Viruses → Predicted Viral3248Open in IMG/M
3300031857|Ga0315909_10295753All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1213Open in IMG/M
3300031951|Ga0315904_10036510Not Available5641Open in IMG/M
3300031963|Ga0315901_10070894All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales3312Open in IMG/M
3300031963|Ga0315901_10134211All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2234Open in IMG/M
3300031963|Ga0315901_10958126All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300032050|Ga0315906_10110078All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2726Open in IMG/M
3300032050|Ga0315906_10702741All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales811Open in IMG/M
3300032116|Ga0315903_10259896All Organisms → Viruses → Predicted Viral1494Open in IMG/M
3300033981|Ga0334982_0046763All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2407Open in IMG/M
3300033981|Ga0334982_0360465All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales669Open in IMG/M
3300033993|Ga0334994_0462957All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales597Open in IMG/M
3300033994|Ga0334996_0237365All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales946Open in IMG/M
3300033994|Ga0334996_0557731All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales500Open in IMG/M
3300034012|Ga0334986_0087421All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1890Open in IMG/M
3300034012|Ga0334986_0280204All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales892Open in IMG/M
3300034061|Ga0334987_0429244All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales827Open in IMG/M
3300034062|Ga0334995_0055777All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3195Open in IMG/M
3300034064|Ga0335001_0607038All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales575Open in IMG/M
3300034073|Ga0310130_0022626All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1991Open in IMG/M
3300034104|Ga0335031_0755798All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales550Open in IMG/M
3300034111|Ga0335063_0055897All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2476Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater17.27%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater10.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake8.18%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake7.27%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous7.27%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.36%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.45%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine5.45%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton4.55%
Coastal LagoonEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Coastal Lagoon4.55%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.64%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.64%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment2.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater1.82%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.82%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.82%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.91%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic0.91%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.91%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.91%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.91%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.91%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2222084011Coastal lagoon microbial communities from Albufera, Spain - Sample 1EnvironmentalOpen in IMG/M
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300001267Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002161Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USAEnvironmentalOpen in IMG/M
3300002384Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006863Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNAEnvironmentalOpen in IMG/M
3300007177Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projectsEnvironmentalOpen in IMG/M
3300007593Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3EnvironmentalOpen in IMG/M
3300007617Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02EnvironmentalOpen in IMG/M
3300007642Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3EnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013133 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2EnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020536Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020553Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300025445Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027127Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8hEnvironmentalOpen in IMG/M
3300027225Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027227Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034064Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034111Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
22251762672222084011Coastal LagoonMKCKHCGYEYQRKAQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKTKAEALEFIRFMGWKPGWAFHNKDRFPILK
22251795382222084011Coastal LagoonHCGYEYQRKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKTKAEALEFIRFMGWKPGWAFHNKDRFPILK
22251797902222084011Coastal LagoonMKCKHCGYEYQRKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKSKAEALEFIRFMGWKPGWGLPQQRPI
22251800552222084011Coastal LagoonMKCKHCGYEYQRKPQEQGEMVDLHLMTKAQGMQIATTXXMYQKAQLAKAKVISPYWVLHNQCKTKAEALEFIRFMGWKPGWAFHNKDRFPILK
22251800922222084011Coastal LagoonMKCKHCGYEYQRKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKTKAEALEFIRFMGWKPGWAFHNKDRFPILK
JGI12547J11936_102369613300000736Freshwater And SedimentLSKPQAMQIAKQSTMYQKAQLAKAKVISPYWVLHNCKSRAEAEEFVSYMGWKRGWYFHNAKRFKIFQS*
B570J13875_10065323300001267FreshwaterMQCKHCKFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
JGI24766J26685_1004288943300002161Freshwater And SedimentMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK*
B570J29636_101078123300002384FreshwaterIIPVGAMKCKHCGYEYQRKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0079957_120498613300005805LakeAMKCKHCGYEYQRKAQEQGEMVDLHLMTKAQGMQLATTSNMYLKAQLAKAKVISPYWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0075471_10015702153300006641AqueousMECKHCGFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSYMGWRRGWLYHNAKRFKIFQS*
Ga0070749_1061797813300006802AqueousMKQKAHLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ*
Ga0075459_105815213300006863AqueousLHLMSKAEAMQVAKTSTMWQKAQLAKAKVISPYWVLHNHCKTKAEALEFIAFMGWKPGWAYHNKDRFKILQS*
Ga0102978_104244023300007177Freshwater LakeMKCPHCGFQHESKPKEIGETVTLQLLTKAQGMEIAKTSTMYQKAQLAKAKVIKPYWVLHTQCKTKEEALEFIRYMGWKAGWAHYNKDRFKILQ*
Ga0102918_117882023300007593EstuarineQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0102897_112153043300007617EstuarineMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0102876_112075213300007642EstuarineHCKHEHERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFISFMGYKPGWVYHNKDRFKILQ*
Ga0105746_114376233300007973Estuary WaterCPHCKHEHERKTQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVILPYWVLHTQCKTKEEALQFISFMGYKPGWVYHNKDRFKILQ*
Ga0114363_104059063300008266Freshwater, PlanktonYQRKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0114363_104799313300008266Freshwater, PlanktonATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0114363_107663613300008266Freshwater, PlanktonQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0114363_112581783300008266Freshwater, PlanktonLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0114363_116884743300008266Freshwater, PlanktonVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
Ga0114876_121317513300008448Freshwater LakeKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0114880_107396743300008450Freshwater LakeTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSKAEALEFICYMGWRPGWAFHNKDRFPILK*
Ga0114880_121140223300008450Freshwater LakeLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK*
Ga0114880_122835423300008450Freshwater LakeTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0114880_123345713300008450Freshwater LakeLHLMTKAQGMHLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0114973_1042522213300009068Freshwater LakeQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
Ga0105091_1046287413300009146Freshwater SedimentGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
Ga0114977_1023583613300009158Freshwater LakeERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVRYMGWRRGWLYYNAKRFKVFQS*
Ga0114970_1063126323300009163Freshwater LakeVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
Ga0105104_1008042763300009168Freshwater SedimentTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
Ga0114979_1037538813300009180Freshwater LakeGMEMAKQSTMYQKAQLAKAKVISPLWVLHNCQTRAEAEEFVSYMGWKRGWYFHNAKRFKVFQS*
Ga0114969_1023383413300009181Freshwater LakeTKAQGMEMAKQSTMYQKAQLAKAKVISPLWVLHNCQTRAEAEEFVTYMGWKRGWYFHNAKRFKVFQS*
Ga0114972_1017177713300009187Freshwater LakeVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS*
Ga0129333_1020778813300010354Freshwater To Marine Saline GradientGEMVDLHLMTKAQGMQLATTSNMYLKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0129333_1138498423300010354Freshwater To Marine Saline GradientAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGWKAGWVYHNKDRFKILQ*
Ga0129333_1141591923300010354Freshwater To Marine Saline GradientMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSHMGWRRGWLYHNAKRFKVFQS*
Ga0129336_1008652213300010370Freshwater To Marine Saline GradientHLMTKAQGMQLATTSNMYLKAQLAKAKVISPYWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0129336_1051974513300010370Freshwater To Marine Saline GradientMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK*
Ga0129336_1058394623300010370Freshwater To Marine Saline GradientDALIPVAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGWKAGWVYHNKDRFKILQ*
Ga0133913_1165608413300010885Freshwater LakeMEMAKQSTMYQKAQLAKAKVISPLWVLHNCQTRAEAEEFVSYMGWKRGWYFHNAKRFKVFQS*
Ga0164293_1029529513300013004FreshwaterMECKHCKFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS*
Ga0164293_1034071713300013004FreshwaterAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK*
(restricted) Ga0172365_1026257713300013127SedimentMEIAKTSTMYQKAQMAKAKVISPYWVLHNQCKTKEEALQFIAFMGWKAGWAHYNKDRFKILQ*
(restricted) Ga0172373_1014618713300013131FreshwaterMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGWKAGWAHYNKDRFKILQ*
(restricted) Ga0172373_1034519813300013131FreshwaterLIPVAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEMAKTSTMYQKAQLAKAKVISPYWVLHNQCKTKAEALEFIQYMGWKAGWAYHNKDRFPILRQ*
(restricted) Ga0172362_1076126413300013133SedimentQKAQLAKAKVISPLWVLHNQCTTKAEALEFIAYMGYKPGWVHYNKSRFKILQ*
Ga0177922_1028890923300013372FreshwaterALIPVAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ*
Ga0177922_1068685513300013372FreshwaterEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
Ga0177922_1098883013300013372FreshwaterYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK*
Ga0181363_109199713300017707Freshwater LakeSTMYQKAQLAKAKVISPFWVLHNCKSRSEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0181352_114396823300017747Freshwater LakeLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRTEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0181352_120337413300017747Freshwater LakeIIPVAAMKCKHCGFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKERFPILK
Ga0181357_124817213300017777Freshwater LakeEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0181349_101597613300017778Freshwater LakeGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0181348_119048513300017784Freshwater LakeVAAMECKHCKFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0181355_120377013300017785Freshwater LakeMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0181355_121832633300017785Freshwater LakeMKCKHCGYEYQRKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0181355_135760813300017785Freshwater LakeKCKHCGYEYQRKPQEQGEMVDLHLMTKAQGMQLATTSNMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0194110_1083098413300020084Freshwater LakeAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ
Ga0208091_100690953300020506FreshwaterCKFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0208091_102219823300020506FreshwaterCKFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0207939_103410723300020536FreshwaterLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK
Ga0208855_105406423300020553FreshwaterERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0222713_1010040213300021962Estuarine WaterPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ
Ga0222713_1086240723300021962Estuarine WaterMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFISFMGYKPGWVYHNKDRFKILQ
Ga0214917_1029681033300022752FreshwaterLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ
Ga0214923_1006032313300023179FreshwaterKACDALIPVAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0214923_1046629413300023179FreshwaterKACDALIPVAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ
Ga0244777_1015586113300024343EstuarineATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0208424_104685323300025445AqueousLHLMSKAEAMQVAKTSTMWQKAQLAKAKVISPYWVLHNHCKTKAEALEFIAFMGWKPGWAYHNKDRFKILQS
Ga0208147_102029763300025635AqueousLIPVAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGWKAGWVYHNKDRFKILQ
Ga0208147_104928733300025635AqueousLIPVAVMVCPHCKYEYERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ
Ga0208644_131108713300025889AqueousTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSYMGWRRGWLYHNAKRFKIFQS
Ga0208916_1030385333300025896AqueousRKPQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0255071_103602723300027127FreshwaterLKKKRKRKSDGVGGAKNCKACDALIPVAVMVCPHCKHEHERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFIAFMGYKPGWVYHNKDRFKILQ
Ga0208025_103868513300027225EstuarineKRKSDGVGGAKNCKACDALIPVAVMVCPHCKHEHERKPQERAETVTLHLMTKAQGMEAAKTSTMYQKAQLAKAKVISPYWVLHTQCKTKEEALQFISFMGYKPGWVYHNKDRFKILQ
Ga0208929_109023223300027227EstuarineQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0208975_121188323300027659Freshwater LenticEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0209704_119115713300027693Freshwater SedimentEAIIPVAAMECKHCGFEYERKPKPPGEVVNLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0209229_1024251843300027805Freshwater And SedimentLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK
Ga0209229_1034819823300027805Freshwater And SedimentEEGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK
Ga0209400_137468113300027963Freshwater LakeSLQMLTKAQGMEMAKQSTMYEKAQLAKAKVISPFWVLHNCKTRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0209079_1020637633300027972Freshwater SedimentKPPGEVVNLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0315907_1011972983300031758FreshwaterQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0315900_1099867923300031787FreshwaterEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0315909_10066422103300031857FreshwaterSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSKAEALEFICYMGWRPGWAFHNKDRFPILK
Ga0315909_1029575313300031857FreshwaterPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKIFQS
Ga0315904_10036510133300031951FreshwaterGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSKAEALEFICYMGWRPGWAFHNKDRFPILK
Ga0315901_10070894113300031963FreshwaterMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK
Ga0315901_1013421173300031963FreshwaterQEQGEMVDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0315901_1095812613300031963FreshwaterDLHLMTKAQGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK
Ga0315906_1011007813300032050FreshwaterGMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRFMGWKPGWAFHNKDRFPILK
Ga0315906_1070274113300032050FreshwaterHLMTKAQGMQLATTSSMYQKAQLAKAKVISPYWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0315903_1025989613300032116FreshwaterPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0334982_0046763_2156_23653300033981FreshwaterMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0334982_0360465_41_3223300033981FreshwaterMECKHCKFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0334994_0462957_333_5963300033993FreshwaterGFVYQRKPKETNEMVELSRLSKPQAMQIAKQSTMYQKAQLAKAKVISPYWVLHNCKSRAEAEEFVSYMGWKRGWYFHNAKRFKIFQS
Ga0334996_0237365_742_9303300033994FreshwaterMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0334996_0557731_177_4583300033994FreshwaterMECKHCGFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLFHNAKRFKVFQS
Ga0334986_0087421_1602_18113300034012FreshwaterMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS
Ga0334986_0280204_1_2703300034012FreshwaterHCGYEYQRKPQEQGEMVDLHLMTKAQGMQLATTSNMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0334987_0429244_4_2853300034061FreshwaterMKCKHCGFEYEQKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0334995_0055777_14_2023300034062FreshwaterMQLATTSSMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWKPGWAFHNKDRFPILK
Ga0335001_0607038_14_2953300034064FreshwaterMECKNCGFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNQCKSKAEALEFIRYMGWRPGWAFHNKDRFPILK
Ga0310130_0022626_1710_19913300034073Fracking WaterMECKHCGYEYERKPKAPSEVVNLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKTRAEAEEFVSHMGWRRGWLYHNAKRFKVFQS
Ga0335031_0755798_362_5503300034104FreshwaterMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLFHNAKRFKVFQS
Ga0335063_0055897_15_2963300034111FreshwaterMECKHCKFEYERKPKPPGEVVSLQMLTKAQGMEMAKQSTMYQKAQLAKAKVISPFWVLHNCKSRAEAEEFVSYMGWRRGWLYHNAKRFKVFQS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.