NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087056

Metagenome Family F087056

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087056
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 52 residues
Representative Sequence MKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Number of Associated Samples 87
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 40.78 %
% of genes near scaffold ends (potentially truncated) 26.36 %
% of genes from short scaffolds (< 2000 bps) 82.73 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (77.273 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(32.727 % of family members)
Environment Ontology (ENVO) Unclassified
(92.727 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.364 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.78%    β-sheet: 0.00%    Coil/Unstructured: 61.22%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00011HSP20 5.45
PF03237Terminase_6N 4.55
PF04377ATE_C 1.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 5.45
COG2935Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferasePosttranslational modification, protein turnover, chaperones [O] 1.82


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A77.27 %
All OrganismsrootAll Organisms22.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10161880Not Available754Open in IMG/M
3300000117|DelMOWin2010_c10206703Not Available600Open in IMG/M
3300000949|BBAY94_10057242Not Available1081Open in IMG/M
3300001963|GOS2229_1034008All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300002482|JGI25127J35165_1004684All Organisms → cellular organisms → Bacteria → Proteobacteria3639Open in IMG/M
3300002482|JGI25127J35165_1053000All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria874Open in IMG/M
3300002483|JGI25132J35274_1044008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria979Open in IMG/M
3300002483|JGI25132J35274_1106305All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium567Open in IMG/M
3300002483|JGI25132J35274_1111602Not Available550Open in IMG/M
3300004829|Ga0068515_106077Not Available1536Open in IMG/M
3300004829|Ga0068515_126857All Organisms → Viruses720Open in IMG/M
3300005057|Ga0068511_1022300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria929Open in IMG/M
3300006735|Ga0098038_1008587Not Available4063Open in IMG/M
3300006735|Ga0098038_1022081All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae2416Open in IMG/M
3300006735|Ga0098038_1218631Not Available611Open in IMG/M
3300006737|Ga0098037_1051424All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED451482Open in IMG/M
3300006749|Ga0098042_1036484Not Available1374Open in IMG/M
3300006749|Ga0098042_1128411Not Available630Open in IMG/M
3300006749|Ga0098042_1130190Not Available624Open in IMG/M
3300006793|Ga0098055_1106653Not Available1092Open in IMG/M
3300006802|Ga0070749_10549569Not Available626Open in IMG/M
3300006810|Ga0070754_10017609All Organisms → Viruses → Predicted Viral4258Open in IMG/M
3300006916|Ga0070750_10362204Not Available610Open in IMG/M
3300006928|Ga0098041_1177356Not Available683Open in IMG/M
3300006929|Ga0098036_1052858Not Available1261Open in IMG/M
3300007234|Ga0075460_10198413Not Available684Open in IMG/M
3300007540|Ga0099847_1083901Not Available979Open in IMG/M
3300007963|Ga0110931_1081474Not Available977Open in IMG/M
3300007963|Ga0110931_1123540Not Available778Open in IMG/M
3300008216|Ga0114898_1027926All Organisms → cellular organisms → Bacteria1910Open in IMG/M
3300009413|Ga0114902_1109696Not Available729Open in IMG/M
3300009604|Ga0114901_1081585Not Available1047Open in IMG/M
3300009703|Ga0114933_10022242Not Available4931Open in IMG/M
3300010148|Ga0098043_1057031Not Available1186Open in IMG/M
3300010148|Ga0098043_1131887Not Available715Open in IMG/M
3300010148|Ga0098043_1148960Not Available663Open in IMG/M
3300010148|Ga0098043_1206042Not Available543Open in IMG/M
3300012920|Ga0160423_10768173Not Available649Open in IMG/M
3300012920|Ga0160423_10862593Not Available608Open in IMG/M
3300012928|Ga0163110_10593074Not Available855Open in IMG/M
3300012936|Ga0163109_10086032All Organisms → cellular organisms → Bacteria2303Open in IMG/M
3300017697|Ga0180120_10364995Not Available570Open in IMG/M
3300017708|Ga0181369_1070919Not Available753Open in IMG/M
3300017710|Ga0181403_1089091Not Available643Open in IMG/M
3300017710|Ga0181403_1109722Not Available577Open in IMG/M
3300017720|Ga0181383_1011733Not Available2343Open in IMG/M
3300017726|Ga0181381_1071842Not Available744Open in IMG/M
3300017730|Ga0181417_1081500Not Available784Open in IMG/M
3300017732|Ga0181415_1028289All Organisms → Viruses → Predicted Viral1296Open in IMG/M
3300017733|Ga0181426_1114137Not Available543Open in IMG/M
3300017734|Ga0187222_1156267Not Available506Open in IMG/M
3300017739|Ga0181433_1006469Not Available3363Open in IMG/M
3300017741|Ga0181421_1030608Not Available1456Open in IMG/M
3300017748|Ga0181393_1044717All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300017750|Ga0181405_1124102Not Available643Open in IMG/M
3300017752|Ga0181400_1213840Not Available528Open in IMG/M
3300017753|Ga0181407_1127480Not Available633Open in IMG/M
3300017757|Ga0181420_1059803Not Available1211Open in IMG/M
3300017759|Ga0181414_1166871Not Available574Open in IMG/M
3300017764|Ga0181385_1028261All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales1781Open in IMG/M
3300017765|Ga0181413_1175531Not Available643Open in IMG/M
3300017768|Ga0187220_1076718Not Available1008Open in IMG/M
3300017769|Ga0187221_1246578Not Available507Open in IMG/M
3300017770|Ga0187217_1193013Not Available674Open in IMG/M
3300017773|Ga0181386_1194545Not Available611Open in IMG/M
3300017776|Ga0181394_1205824Not Available598Open in IMG/M
3300017779|Ga0181395_1192519Not Available635Open in IMG/M
3300017782|Ga0181380_1205208Not Available660Open in IMG/M
3300019751|Ga0194029_1009617Not Available1368Open in IMG/M
3300020374|Ga0211477_10125483Not Available930Open in IMG/M
3300020374|Ga0211477_10171943Not Available766Open in IMG/M
3300020381|Ga0211476_10039644Not Available1974Open in IMG/M
3300020388|Ga0211678_10299210Not Available655Open in IMG/M
3300020392|Ga0211666_10291653Not Available612Open in IMG/M
3300020408|Ga0211651_10106278All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1155Open in IMG/M
3300020414|Ga0211523_10058972Not Available1642Open in IMG/M
3300020419|Ga0211512_10030826Not Available2662Open in IMG/M
3300020430|Ga0211622_10391100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium596Open in IMG/M
3300020439|Ga0211558_10049894All Organisms → Viruses2091Open in IMG/M
3300020440|Ga0211518_10127585Not Available1312Open in IMG/M
3300020463|Ga0211676_10319273Not Available878Open in IMG/M
3300022074|Ga0224906_1036649All Organisms → Viruses1641Open in IMG/M
3300022074|Ga0224906_1125037Not Available741Open in IMG/M
3300024344|Ga0209992_10220184Not Available799Open in IMG/M
3300024346|Ga0244775_10695462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria820Open in IMG/M
3300025048|Ga0207905_1029208All Organisms → Viruses898Open in IMG/M
3300025099|Ga0208669_1086067Not Available670Open in IMG/M
3300025101|Ga0208159_1079181All Organisms → Viruses623Open in IMG/M
3300025120|Ga0209535_1011218Not Available5026Open in IMG/M
3300025127|Ga0209348_1030349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1945Open in IMG/M
3300025127|Ga0209348_1036521All Organisms → Viruses1730Open in IMG/M
3300025127|Ga0209348_1108978Not Available852Open in IMG/M
3300025128|Ga0208919_1038884Not Available1681Open in IMG/M
3300025151|Ga0209645_1092000Not Available994Open in IMG/M
3300025151|Ga0209645_1096535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria963Open in IMG/M
3300025151|Ga0209645_1212245Not Available563Open in IMG/M
3300025151|Ga0209645_1212747Not Available562Open in IMG/M
3300025280|Ga0208449_1094241Not Available716Open in IMG/M
3300025305|Ga0208684_1125440Not Available620Open in IMG/M
3300025508|Ga0208148_1076487Not Available764Open in IMG/M
3300025543|Ga0208303_1082132Not Available712Open in IMG/M
3300029309|Ga0183683_1017208Not Available1575Open in IMG/M
3300029448|Ga0183755_1000368Not Available27658Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine32.73%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater28.18%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine12.73%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous7.27%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean4.55%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater3.64%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.82%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water1.82%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.82%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.91%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.91%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.91%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.91%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.91%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300020374Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)EnvironmentalOpen in IMG/M
3300020381Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020392Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)EnvironmentalOpen in IMG/M
3300020408Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020419Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300020440Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300029309Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1016188033300000116MarineMNNNKMKFNGKSDNRNNRTAAFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA*
DelMOWin2010_1020670333300000117MarineGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA*
BBAY94_1005724243300000949Macroalgal SurfaceMNLRSPKDKKFNGMSDNKNNRTSTFKLDTAKADLDNDGKLSSYEKTRGMAIQKAMKGKA*
GOS2229_103400843300001963MarineMNNNKIKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQNAMKGKA*
JGI25127J35165_100468483300002482MarineMNLRSPKDKKFNGMSDNKNNRTSTFKLDTAKADLDKDGKLSSXEXXRGMAIQKAI*
JGI25127J35165_105300033300002482MarineMNDNKMKMNGKSDNRNNRTADFDIQKADRDKDGVISDYEETVAKAIAKSMRE
JGI25132J35274_104400833300002483MarineMNPKSMKFNGKSDNRNNRTTTFKLDTAKADLDKDGKLSSYERARGMAIQKNMKK
JGI25132J35274_110630523300002483MarineMNPKSMKFNGKSDNRNNRTANFDIKKADIDKDGSISSYEATRARAINKAMKEQNKKA*
JGI25132J35274_111160233300002483MarineMKFNGKSDNRNNRTADFDIKKADIDKDGDISSYEATRARAINKAMKEQKKGKV*
Ga0068515_10607743300004829Marine WaterMNPKDMKFNGKSDNRNNRTTNFKLDTVKADLDKDGKLSSYEKARGMAIQKNMKKV*
Ga0068515_12685723300004829Marine WaterMNPKDMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0068511_102230023300005057Marine WaterMNPKNIKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0075466_114937313300006029AqueousRTATFNMQKADLDKDGKISSYEKTRGMAIQNAMKGKA*
Ga0098038_100858783300006735MarineMNDNKMKMNGKSDNRNNRTMDFDMKKADRDNDGTVSDYEATVAKAIAKSMKEQKNKKA*
Ga0098038_102208143300006735MarineMNKLRDSKDKKFNGMSDNRNNRTSAFKLDMAKADLDKDGSLSSYEKTRGMAIQKAMKKS*
Ga0098038_121863113300006735MarineMNPKSMKFNGKSDNRNNRTADFDIKKADIDKDGDISSYEATRARAINKAMKGKA*
Ga0098037_105142453300006737MarineMNPKSMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0098042_103648433300006749MarineMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0098042_109484343300006749MarineAFKLDMAKADLDKDGSLSSYEKTRGMAIQKAMKKS*
Ga0098042_112841123300006749MarineMNPKNIKFNGKSDNRNNRTSTFKLDTAKADLDKDGKLSPYERARGTAIQKNMKGKA*
Ga0098042_113019023300006749MarineMNPKSIKFNGKSDNRNNRTADFDIKKADIDKDGDISSYEATRARAINKAMKEQNKKA*
Ga0098055_110665313300006793MarineGKSDNRNNRTATFNMQKADLDKDGKVSPYERTRGMAIQKAMKGKA*
Ga0070749_1054956933300006802AqueousMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA*
Ga0070754_1001760983300006810AqueousMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQNAMKGKA*
Ga0070750_1036220423300006916AqueousMKFNDKSDNRNNRTYDFDVKKADRDNDGKVSSYEATVAKAISKSMKNKKS*
Ga0098041_117735623300006928MarineMNNNKMKFNGKSDNRNNRTADFDIKKADIDKDGDISSYEATRARAINKAMKEQKNKKA*
Ga0098036_105285823300006929MarineMNQKDKKFNGMSDNKNNRTATLNLNTEKADLDKDGKISSYEKTRGMAIQKAMKGKA*
Ga0098036_112839813300006929MarineNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0075460_1019841333300007234AqueousMNNNKMKFNGKSDNRNNRIATFNMQKADLDKDGKISSYEKTRGIAIQKAMKGKA*
Ga0099847_108390133300007540AqueousMNNNKIKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA*
Ga0110931_108147423300007963MarineMNDNKMKMNGKSDNRNNRTMDFDMKKADRDNDGTISDYEATVAKAIAKSMKEQKNKKA*
Ga0110931_112354033300007963MarineILVSIMNPKSMKFNGKSDNRNNRTANFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA
Ga0114898_102792633300008216Deep OceanMNDNKMKMNGKSDNRNNRTMNFDMKKADLDNDGKLSPYEKTRGMAIQKAMTKKA*
Ga0114902_110969633300009413Deep OceanMNDNKMKMNGKSDNRNNRTMNFDMKKADLDKDGKLSAYEKTRGMAIQKAMTKKA*
Ga0114901_108158543300009604Deep OceanMNDNKMKMNGKSDNRNNRTMNFDMKKADLDKDGKLSSYEKTRGMAIQKAMKGKA*
Ga0114933_1002224293300009703Deep SubsurfaceMNPKDMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYEKARGMAIQKNMKKV*
Ga0098043_105703153300010148MarineMNKLRNPNDKKFNGMSDNRNNRTSSFKLDTEKADLDKDGKLSSYEKTRGMAIQKAMKKA*
Ga0098043_113188713300010148MarineKFNGKSDNRNNRTSTFKLDTAKADLDKDGKLSPYERARGTAIQKNMKGKA*
Ga0098043_114896013300010148MarineMNPKSMKFNGKSDNRNNRTANFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0098043_120604223300010148MarineMNPKNIKFNGKSDNRNNRTSTFKLDTAKADLDKDGKLSSYERARGTAIQKNMKGKA*
Ga0160423_1076817313300012920Surface SeawaterMNPKSMKFNGKSDNRNNRTSTFKLDTAKADLDKDGKLSPYERARGTAIQKNMKGKA*
Ga0160423_1086259313300012920Surface SeawaterSDNRNNRTANFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKS*
Ga0163110_1059307443300012928Surface SeawaterMNPKSMKFNGKSDNRNNRTSTFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0163109_1008603283300012936Surface SeawaterMNPKNVKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA*
Ga0180120_1036499523300017697Freshwater To Marine Saline GradientMKFNDKSDNRNNRTYDFDVKKADRDNDGKVSSYEATVAKAISKSMKNKKS
Ga0181369_107091923300017708MarineMKFNGKSDNRNNRTATFNMQKADLDKDGKVSPYERTRGMAIQKAMKGKA
Ga0181403_108909143300017710SeawaterMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGK
Ga0181403_110972213300017710SeawaterFNGKSDNRNNRTATFNMQKADLDKDGKILSYEKTRGMAIQKAMKGKV
Ga0181390_113597113300017719SeawaterNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKV
Ga0181383_101173313300017720SeawaterMNLRSPKDKKFNGMSDNRNSRTADTGINMKKADLDKDGKLSSYEKT
Ga0181381_107184233300017726SeawaterMNNNKMKFNGKSDNRKNRNVTFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0181401_108215113300017727SeawaterATFNMQKADLDKDGKVSPYERTRGMAIQKAMKGKV
Ga0181417_108150033300017730SeawaterMKFNDKSDNRNNRTYNFDVKKADRDNDGKISSYEATVAKAISKSMKKQKSKA
Ga0181415_102828943300017732SeawaterMNDNKMKMNGKSDNRNNRTMDFDMKKADRDNDGTVSDYEATVAKAIAKSMKEQKNKKVKV
Ga0181426_111413723300017733SeawaterMNNNKIKFNGKSDNRNNRTATFNMQKADLDKDGKVSPYEKTRGMAIQKAMRGKV
Ga0187222_115626713300017734SeawaterMKFNGKSDNRNNRTYDFDVKKADRDNDGKVSSYEATVAKAISKSMKKQKSKA
Ga0181433_100646983300017739SeawaterMNDNKIKMNGKSDNRNNRTMDFDMKKADRDNDGTVSDYEATVAKAIAKSMKEQKNKNA
Ga0181421_103060833300017741SeawaterMNNNKIKFNGKSDNRNNRTATFNMQKADLDKDGKVSPYERTRGMAIQKAMRGKV
Ga0181393_104471753300017748SeawaterMKFNGKSDNRNNRTATFNMQKADLDKDGNISPYEKTRGMAIQKAMKGKA
Ga0181392_111636843300017749SeawaterSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKV
Ga0181405_112410213300017750SeawaterRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKV
Ga0181400_121384013300017752SeawaterMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYERTRGMAIQKAMKGKV
Ga0181407_112748013300017753SeawaterKFNDKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0181420_105980313300017757SeawaterKMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKV
Ga0181414_116687113300017759SeawaterSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0181408_110467433300017760SeawaterATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKV
Ga0181385_102826133300017764SeawaterMRNDKKFNGSMDNRNNKMANFKLDTAKADLDGDKVLSPYERARGTAIQKAMKKGGKA
Ga0181413_117553143300017765SeawaterNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0187220_107671833300017768SeawaterMNDNKMKMNGKTDNRNNRTMDFDMKKADRDNDGTVSDYEATVAKAIAKSMKEQKNKKA
Ga0187221_124657833300017769SeawaterMNGKTDNRNNRTMDFDMKKADRDNDGTVSDYEATVAKAIAKSMKEQKNKKA
Ga0187217_119301343300017770SeawaterMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMK
Ga0181386_119454513300017773SeawaterMNDNKMKMNGKSDNRNNRTMDFDMKKADRDNDGTVSDYEATVAKAIAKSMKEQKNKKA
Ga0181394_120582443300017776SeawaterGEPDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0181395_119251913300017779SeawaterKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0181380_120520823300017782SeawaterMNNNKIKFNGKSDNRNNRTATFNMQKADLDKDGKVSPYERTRGMAIQKAMKGKA
Ga0194029_100961753300019751FreshwaterMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQNAMKGKA
Ga0211477_1012548333300020374MarineMNDNKMKMNGKSDNRNNRTINFDMKKADLDNDGKLSPYEKTRGMAIQKAMTKKA
Ga0211477_1017194313300020374MarineMNDNKMKMNGKTDNRNNRTMNFDMKKADLDKDGKLSSYEKTRGMAIQKAMKGKA
Ga0211476_1003964453300020381MarineMNDNKMKMNGKSDNRNNRTMNFDMKKADLDNDGKLSPYEKTRGMAIQKAMTKKA
Ga0211678_1029921043300020388MarineMNKLRDSKDKKFNGMSDNRNNRTSAFKLDMAKADLDKDGSLSSYEKTR
Ga0211666_1029165333300020392MarineMNKLRNPNDKKFNGMSDNRNNRTSSFKLDTEKADLDKDGKLSSYEKTRGMAIQKAMKKA
Ga0211651_1010627843300020408MarineMNPKSMKFNGKSDNRNNRTSTFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA
Ga0211523_1005897243300020414MarineMNPKNIKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA
Ga0211512_1003082683300020419MarineMNQKDKKFNGRSDNRNNRTSTFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0211622_1039110033300020430MarineMNKLRNPKDKKFNGMSDNRNNRTSSFKLDTEKADLDKDGKLSSYEKTRGMAIQKAMKKA
Ga0211558_1004989463300020439MarineMNPKDMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKV
Ga0211518_1012758543300020440MarineMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYEKARGMAIQKNMKKV
Ga0211676_1031927333300020463MarineMNKLRDSKDKKFNGMSDNRNNRTSAFKLDMAKADLDKDGSLSSYEKTRGMAIQKAMKKS
Ga0224906_103664953300022074SeawaterMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0224906_112503713300022074SeawaterMNDNKMKMNGKSDNRNNRTMDFDMKKADRDNDGTVSDYEATVAKAIAKSMKEQKNK
Ga0209992_1022018433300024344Deep SubsurfaceMNGKTDNRNNRTMNFDMKKADLDKDGKLSSYEKTRGMAIQKAMKGKA
Ga0244775_1069546213300024346EstuarineMKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKV
Ga0207905_102920843300025048MarineMKFNDKSDNRNNRTYDFDVKKADRDNDGKVSSYEATVAKAISKSMKKQKSKA
Ga0208669_108606743300025099MarineMNQKDKKFNGMSDNKNNRTATLNLNTEKADLDKDGKISSYEKTRGMAI
Ga0208159_107918133300025101MarineMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA
Ga0209535_1011218113300025120MarineRNNRTATFNMQKADLDKDGKVSPYERTRGMAIQKAMKGKA
Ga0209348_103034973300025127MarineMNDNKMKMNGKSDNRNNRTADFDIQKADRDKDGVISDYEETVAKAIAKSMREQNKKKA
Ga0209348_103652123300025127MarineMNPKSMKFNGKSDNRNNRTADFDIKKADIDKDGDISSYEATRARAINKAMKEQNKKA
Ga0209348_110897833300025127MarineNLRSPKDKKFNGMSDNKNNRTSTFKLDTAKADLDKDGKLSSYEKARGMAIQKNMKKA
Ga0208919_103888433300025128MarineMNQKDKKFNGMSDNKNNRTATLNLNTEKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0209645_109200013300025151MarineMNTNKMKFNGKSDNRNNRTTDFDIKKADIDNDGDISSYEATRARAINKAMKEQKNKKV
Ga0209645_109653513300025151MarineMNLRSPKDKKFNGMSDNKNNRTSTFKLDTAKADLDKDGKLSSYEKTRGMAIQKA
Ga0209645_121224513300025151MarineMKFNGKSDNRNNRTANFDIKKADIDKDGSISSYEATRARAINKAMKEQNKKA
Ga0209645_121274743300025151MarineKSMKFNGKSDNRNNRTADFDIKKADIDKDGDISSYEATRARAINKAMKEQKKGKV
Ga0208449_109424133300025280Deep OceanDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQKAMKGKA
Ga0208684_112544013300025305Deep OceanNKMKMNGKSDNRNNRTMNFDMKKADLDNDGKLSPYEKTRGMAIQKAMTKKA
Ga0208148_107648713300025508AqueousIKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQNAMKGKA
Ga0208303_108213233300025543AqueousMNNNKIKFNGKSDNRNNRTATFNMQKADLDKDGKISSYEKTRGMAIQNAMKGKA
Ga0183683_101720833300029309MarineMNPKSMKFNGKSDNRNNRTANFKLDTAKADLDKDGKLSSYERARGMAIQKNMKKA
Ga0183755_1000368203300029448MarineMNPKDMKFNGKSDNRNNRTTNFKLDTAKADLDKDGKLSSYEKARGMAIQKNMKKV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.