NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087030

Metagenome / Metatranscriptome Family F087030

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087030
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 70 residues
Representative Sequence MLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT
Number of Associated Samples 76
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 29.36 %
% of genes near scaffold ends (potentially truncated) 44.55 %
% of genes from short scaffolds (< 2000 bps) 84.55 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (76.364 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(73.636 % of family members)
Environment Ontology (ENVO) Unclassified
(95.455 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(100.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.00%    β-sheet: 31.43%    Coil/Unstructured: 38.57%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00268Ribonuc_red_sm 2.73
PF03452Anp1 2.73
PF11753DUF3310 1.82
PF08291Peptidase_M15_3 0.91
PF01612DNA_pol_A_exo1 0.91
PF00476DNA_pol_A 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 2.73
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A76.36 %
All OrganismsrootAll Organisms23.64 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001117|JGI11785J13272_1011702Not Available1094Open in IMG/M
3300001740|JGI24656J20076_1014795Not Available967Open in IMG/M
3300002484|JGI25129J35166_1021371Not Available1476Open in IMG/M
3300002484|JGI25129J35166_1047429Not Available841Open in IMG/M
3300002511|JGI25131J35506_1055212Not Available551Open in IMG/M
3300002514|JGI25133J35611_10011060Not Available3919Open in IMG/M
3300002514|JGI25133J35611_10115310Not Available773Open in IMG/M
3300002514|JGI25133J35611_10166298Not Available596Open in IMG/M
3300002514|JGI25133J35611_10208232Not Available510Open in IMG/M
3300002518|JGI25134J35505_10003770All Organisms → cellular organisms → Bacteria → Proteobacteria5716Open in IMG/M
3300002518|JGI25134J35505_10034793Not Available1378Open in IMG/M
3300002760|JGI25136J39404_1006565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2016Open in IMG/M
3300005400|Ga0066867_10012211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3673Open in IMG/M
3300005400|Ga0066867_10023856Not Available2506Open in IMG/M
3300005408|Ga0066848_10106043Not Available764Open in IMG/M
3300005423|Ga0066828_10020870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2472Open in IMG/M
3300005423|Ga0066828_10282364Not Available535Open in IMG/M
3300005425|Ga0066859_10088025Not Available935Open in IMG/M
3300005425|Ga0066859_10231074Not Available541Open in IMG/M
3300005426|Ga0066847_10213335Not Available588Open in IMG/M
3300005426|Ga0066847_10221214Not Available576Open in IMG/M
3300005427|Ga0066851_10033262Not Available1824Open in IMG/M
3300005428|Ga0066863_10053074Not Available1517Open in IMG/M
3300005509|Ga0066827_10092354Not Available1119Open in IMG/M
3300005521|Ga0066862_10234249Not Available603Open in IMG/M
3300005551|Ga0066843_10024324All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P1897Open in IMG/M
3300005594|Ga0066839_10070899Not Available1207Open in IMG/M
3300005596|Ga0066834_10144630Not Available765Open in IMG/M
3300005603|Ga0066853_10099590Not Available988Open in IMG/M
3300005604|Ga0066852_10028873All Organisms → Viruses → environmental samples → uncultured Mediterranean phage2131Open in IMG/M
3300006090|Ga0082015_1058478Not Available610Open in IMG/M
3300006093|Ga0082019_1053090Not Available723Open in IMG/M
3300006736|Ga0098033_1172081Not Available603Open in IMG/M
3300006738|Ga0098035_1217315All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon635Open in IMG/M
3300006738|Ga0098035_1266627Not Available562Open in IMG/M
3300006750|Ga0098058_1197183Not Available524Open in IMG/M
3300006793|Ga0098055_1135135Not Available954Open in IMG/M
3300006922|Ga0098045_1021934All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300006922|Ga0098045_1163460Not Available508Open in IMG/M
3300006927|Ga0098034_1176126Not Available600Open in IMG/M
3300007963|Ga0110931_1075746Not Available1015Open in IMG/M
3300008050|Ga0098052_1042931Not Available1986Open in IMG/M
3300010149|Ga0098049_1074033Not Available1074Open in IMG/M
3300010150|Ga0098056_1025200Not Available2103Open in IMG/M
3300010150|Ga0098056_1240372Not Available601Open in IMG/M
3300010151|Ga0098061_1171242Not Available779Open in IMG/M
3300011312|Ga0138349_1094673Not Available1962Open in IMG/M
3300012950|Ga0163108_10157975All Organisms → cellular organisms → Bacteria → Proteobacteria1453Open in IMG/M
3300017703|Ga0181367_1082275Not Available555Open in IMG/M
3300017703|Ga0181367_1083412Not Available551Open in IMG/M
3300017715|Ga0181370_1043806Not Available576Open in IMG/M
3300017775|Ga0181432_1233890Not Available578Open in IMG/M
3300020256|Ga0211645_1032170Not Available887Open in IMG/M
3300020262|Ga0211537_1007296Not Available2873Open in IMG/M
3300020262|Ga0211537_1015737Not Available1700Open in IMG/M
3300020277|Ga0211568_1018194All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1714Open in IMG/M
3300020295|Ga0211530_1061117Not Available609Open in IMG/M
3300020295|Ga0211530_1064160Not Available590Open in IMG/M
3300020321|Ga0211560_1042084Not Available1032Open in IMG/M
3300020327|Ga0211573_1081844All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria768Open in IMG/M
3300020330|Ga0211572_1113493Not Available616Open in IMG/M
3300020338|Ga0211571_1031614Not Available1447Open in IMG/M
3300020338|Ga0211571_1044489All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P1159Open in IMG/M
3300020338|Ga0211571_1083917Not Available758Open in IMG/M
3300020344|Ga0211570_1030137All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1466Open in IMG/M
3300020344|Ga0211570_1138076Not Available506Open in IMG/M
3300020361|Ga0211531_1028441Not Available1698Open in IMG/M
3300020373|Ga0211660_10147885Not Available845Open in IMG/M
3300020383|Ga0211646_10027942All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2234Open in IMG/M
3300020449|Ga0211642_10218665Not Available821Open in IMG/M
3300020449|Ga0211642_10224639Not Available809Open in IMG/M
3300022227|Ga0187827_10267663Not Available1117Open in IMG/M
3300022227|Ga0187827_10508280All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon721Open in IMG/M
3300025072|Ga0208920_1017460Not Available1566Open in IMG/M
3300025078|Ga0208668_1057511Not Available713Open in IMG/M
3300025078|Ga0208668_1058686Not Available704Open in IMG/M
3300025078|Ga0208668_1060075Not Available694Open in IMG/M
3300025078|Ga0208668_1063941All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon667Open in IMG/M
3300025078|Ga0208668_1089073Not Available543Open in IMG/M
3300025082|Ga0208156_1086630Not Available578Open in IMG/M
3300025082|Ga0208156_1093893Not Available545Open in IMG/M
3300025097|Ga0208010_1111088Not Available557Open in IMG/M
3300025109|Ga0208553_1051287All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1020Open in IMG/M
3300025109|Ga0208553_1077948Not Available789Open in IMG/M
3300025114|Ga0208433_1005185Not Available4096Open in IMG/M
3300025118|Ga0208790_1214945Not Available500Open in IMG/M
3300025122|Ga0209434_1087864Not Available903Open in IMG/M
3300025125|Ga0209644_1011372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1858Open in IMG/M
3300025128|Ga0208919_1029636All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P1988Open in IMG/M
3300025131|Ga0209128_1004391Not Available8329Open in IMG/M
3300025131|Ga0209128_1158529Not Available671Open in IMG/M
3300025132|Ga0209232_1207425Not Available595Open in IMG/M
3300025133|Ga0208299_1151865Not Available727Open in IMG/M
3300025268|Ga0207894_1048352Not Available742Open in IMG/M
3300025268|Ga0207894_1069923Not Available601Open in IMG/M
3300025776|Ga0208699_1010301Not Available1358Open in IMG/M
3300025873|Ga0209757_10075618Not Available1012Open in IMG/M
3300026188|Ga0208274_1050806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1073Open in IMG/M
3300026188|Ga0208274_1069396Not Available869Open in IMG/M
3300026192|Ga0207986_1012810All Organisms → cellular organisms → Bacteria2497Open in IMG/M
3300026192|Ga0207986_1048183Not Available1029Open in IMG/M
3300026202|Ga0207984_1010426All Organisms → cellular organisms → Bacteria3123Open in IMG/M
3300026202|Ga0207984_1077582Not Available815Open in IMG/M
3300026260|Ga0208408_1031710Not Available1880Open in IMG/M
3300026260|Ga0208408_1096132Not Available884Open in IMG/M
3300026262|Ga0207990_1035214All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1468Open in IMG/M
3300026268|Ga0208641_1032636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1699Open in IMG/M
3300026279|Ga0208411_1011176All Organisms → cellular organisms → Bacteria3853Open in IMG/M
3300026279|Ga0208411_1012565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P3544Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine73.64%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine17.27%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.45%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.82%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.91%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001117Marine microbial communities from the Deep Pacific Ocean - MP2098EnvironmentalOpen in IMG/M
3300001740Marine viral communities from the Deep Pacific Ocean - MSP-114EnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300005400Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261EnvironmentalOpen in IMG/M
3300005408Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72EnvironmentalOpen in IMG/M
3300005423Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47EnvironmentalOpen in IMG/M
3300005425Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199EnvironmentalOpen in IMG/M
3300005426Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005428Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253EnvironmentalOpen in IMG/M
3300005509Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005551Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89AEnvironmentalOpen in IMG/M
3300005594Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82EnvironmentalOpen in IMG/M
3300005596Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43BEnvironmentalOpen in IMG/M
3300005603Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61EnvironmentalOpen in IMG/M
3300005604Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63EnvironmentalOpen in IMG/M
3300006090Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124EnvironmentalOpen in IMG/M
3300006093Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300011312Marine microbial communities from the Deep Pacific Ocean - MP2100 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017715Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020256Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556010-ERR599067)EnvironmentalOpen in IMG/M
3300020262Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)EnvironmentalOpen in IMG/M
3300020277Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556102-ERR599152)EnvironmentalOpen in IMG/M
3300020295Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX555980-ERR599109)EnvironmentalOpen in IMG/M
3300020321Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX556042-ERR599060)EnvironmentalOpen in IMG/M
3300020327Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)EnvironmentalOpen in IMG/M
3300020330Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556097-ERR599147)EnvironmentalOpen in IMG/M
3300020338Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX555920-ERR599099)EnvironmentalOpen in IMG/M
3300020344Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)EnvironmentalOpen in IMG/M
3300020361Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)EnvironmentalOpen in IMG/M
3300020373Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)EnvironmentalOpen in IMG/M
3300020383Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)EnvironmentalOpen in IMG/M
3300020449Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025776Marine microbial communities from the Deep Pacific Ocean - MP2097 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026188Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)EnvironmentalOpen in IMG/M
3300026192Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)EnvironmentalOpen in IMG/M
3300026202Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B (SPAdes)EnvironmentalOpen in IMG/M
3300026260Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)EnvironmentalOpen in IMG/M
3300026262Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)EnvironmentalOpen in IMG/M
3300026268Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)EnvironmentalOpen in IMG/M
3300026279Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11785J13272_101170213300001117Deep OceanMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI*
JGI24656J20076_101479513300001740Deep OceanMKIMLILYICATVGGTCDTWVKKPQFDDWDSCMRAGYRDSLKFIEEAGTEXVNKHRMXVKFICKEAPAKKDEAT*
JGI25129J35166_102137153300002484MarineIIYICATVGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEHVNKHRMYVKFICKXVPPKKDEET*
JGI25129J35166_104742923300002484MarineYVCATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEAT*
JGI25131J35506_105521223300002511MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI*
JGI25133J35611_1001106013300002514MarineMLIIYICATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEET*
JGI25133J35611_1011531023300002514MarineMKIMLIVYICASIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT*
JGI25133J35611_1016629823300002514MarineMXIMLIIYICASIGGTCDTWVKKPYFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKNVPSKKDEEL*
JGI25133J35611_1020823213300002514MarineMLILYICASVGGTCDTWVKTPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKKAPVKKDEET*
JGI25134J35505_1000377013300002518MarineMLIIYICATVGGICDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEET*
JGI25134J35505_1003479353300002518MarineMLILYICASIGGTCDTWVKTPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET*
JGI25136J39404_100656553300002760MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT*
Ga0066867_1001221163300005400MarineMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI*
Ga0066867_1002385663300005400MarineMLILYICASIGSTCDTWVKETHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKEDKET*
Ga0066848_1010604333300005408MarineMLIVYICTSIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKNRMYVKFICKRVPVEEKKT*
Ga0066828_1002087033300005423MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT*
Ga0066828_1028236413300005423MarineCASIGGTCDTWVKTPQFDDWDSCMRAGYRDSLKFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET*
Ga0066859_1008802533300005425MarineYGHFVKMKIMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT*
Ga0066859_1023107423300005425MarineYGHFVKMKIMLIIYICTSIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI*
Ga0066847_1021333513300005426MarineMKIMLIIYICTSIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT*
Ga0066847_1022121423300005426MarineMLILYICASIGGTCDIWVKKPYFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKKAPVKKDEET*
Ga0066851_1003326223300005427MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT*
Ga0066863_1005307443300005428MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT*
Ga0066827_1009235443300005509MarineMKIMLILYICASIGSTCDTWVKETHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET*
Ga0066862_1023424933300005521MarineCATVGGVCDTWVKETHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET*
Ga0066843_1002432433300005551MarineMLILYICASIGGTCDTWVKKPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDKET*
Ga0066839_1007089943300005594MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT*
Ga0066834_1014463033300005596MarineGGTCDTWVKKPHFDDWDSCMRAGYANSLEFIEEAGSEYVNKHRMYVKFICKPVPPKEDKET*
Ga0066853_1009959043300005603MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVP
Ga0066852_1002887373300005604MarineMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYTNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEET*
Ga0082015_105847823300006090MarineMKIMLIIYICASIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKNRMYVKFICKRVPVEEKKT*
Ga0082019_105309023300006093MarineMKIMLVILICSSIQGQCDTWVKTPQFDDWHSCMLAGYKDSLKLIEDAGPEYVNKHRMYVKCRCKEEPVNEEET*
Ga0098033_117208123300006736MarineMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEYVNKHRIYVKFICKNVPPKKVNKIEKGV*
Ga0098035_121731513300006738MarineIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKNRMYVKFLCKRVPVEEKKT*
Ga0098035_126662723300006738MarineMKIMLIIYICATAGGVCDTWVKETHFDDWDSCMRAGYKNSLEFIEEAGSEYVNKHRMYVKFICKNVPPKKDEET*
Ga0098058_119718333300006750MarineTCDSWVKETHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRIYVKFICKPVPPKEDKET*
Ga0098055_113513533300006793MarineLILYICASVGGTCDTWVKKPHFDDWDSCMRAGYKDSLKFIEEAGPEYVNKHRMYVKFICKEAPAKKDEAT*
Ga0098045_102193433300006922MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT*
Ga0098045_116346013300006922MarineKIMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEYVNKHRIYVKFICKNVPPKKVNKIEKGV*
Ga0098034_117612613300006927MarineRIIYVKIMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEYVNKHRIYVKFICKNVPPKKVNKIEKGV*
Ga0110931_107574613300007963MarineYICASIGGTCDTWVKKPHFDDWDSCMRAGYANSLEFIEEAGSEYVNKHRMYVKFICKKVPPKKDEET*
Ga0098052_104293163300008050MarineIYICATVGGICDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPKHVNKHRMYVKFICKNVPPKKDEET*
Ga0098049_107403313300010149MarineMKIMLIIYICATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEYVNKHRMYVKFI
Ga0098056_102520073300010150MarineMKIMLIIYICATVGGVCDTWVKETHFDDWDSCMRAGYKNSLEFIEEAGSEYVNKHRMYVKFICKNVPPKKDEET*
Ga0098056_124037213300010150MarineMKLMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT*
Ga0098061_117124223300010151MarineHFVKMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYSTSLDLIKEAGPEYVNKNRMYVKFLCKRVPVEEKKT*
Ga0138349_109467353300011312Deep OceanMLIIYICASIGGTCDTWVKKPYFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKNVPPKKDEEL*
Ga0163108_1015797513300012950SeawaterMKIMLILYICASIGSTCDTWVKETHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRIYVKFICKPV
Ga0181367_108227523300017703MarineMKIMLIIYICATVGGVCDTWVKETHFDDWDSCMRAGYKNSLEFIEEAGSEYVNKHRMYVKFICKNVPPKKDEET
Ga0181367_108341223300017703MarineMLIVYICASIGGTCDTWVKKPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET
Ga0181370_104380613300017715MarineMKIMLIIYICTTIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0181432_123389033300017775SeawaterMKIMLIIYICATIGGTCDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFR
Ga0211645_103217023300020256MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT
Ga0211537_100729643300020262MarineMLILYICTSIGGVCDTWVKETHFDDWDSCMRAGYSNSLDLIKEAGPEYVNKHRMYVKFICKNVPPKKANKIEKDV
Ga0211537_101573773300020262MarineMKIMLIIYICATVGGICDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEYVNKHRMYVKFI
Ga0211568_101819433300020277MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT
Ga0211530_106111723300020295MarineMKIMLIIYICTSIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0211530_106416023300020295MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKNRMYVKFICKTVPVEEKKT
Ga0211560_104208423300020321MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT
Ga0211573_108184413300020327MarineMLILYICASIGGTCDIWVKKPYFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKK
Ga0211572_111349323300020330MarineICTSIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0211571_103161463300020338MarineMKIMLIIYICATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEHVNKHRMYVKFI
Ga0211571_104448913300020338MarineTSIGGTCDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0211571_108391713300020338MarineLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYTNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEET
Ga0211570_103013733300020344MarineMLILYICASVGGTCDTWVKTPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET
Ga0211570_113807613300020344MarineVKMKIMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT
Ga0211531_102844113300020361MarineMKIMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0211660_1014788513300020373MarineICTSIGGVCDTWVKETHFDDWDSCMRTGYSNSLDLIKEAGPEYVNKHRMYIKFRCQKVPPKKDNKIEKGV
Ga0211646_1002794253300020383MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT
Ga0211642_1021866523300020449MarineCATVGGTCDTWVKKPHFDDWDSCMRAGYRDSLKFIEEAGTEHVNKHRMYVKFICKEAPAKKDEAT
Ga0211642_1022463923300020449MarineSLGGVCDTWVKTPQFDDWHSCMLAGYKDSLKLIEEAGPEYVNKHRMYVKFMCKEEPVNDDET
Ga0187827_1026766313300022227SeawaterMLILYICASIGGTCDTWVKTPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDKE
Ga0187827_1050828013300022227SeawaterGFYGHFVKMKIMLIVYICASIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKNRMYVKFLCKRVPVEEKKT
Ga0208920_101746053300025072MarineMLILYICASIGGTCDTWVKTPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET
Ga0208668_105751123300025078MarineMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEYVNKHRIYVKFICKNVPPKKVNKIEKGV
Ga0208668_105868613300025078MarineGTCDTWVKTPQFDDWDSCMRAGYRDSLKFIEEAGTEHVNKHRMYVKFICKEAPAKKDEAT
Ga0208668_106007513300025078MarineILYICASIGGTCDTWVKKPHFDDWDSCMRAGYANSLEFIEEAGSEYVNKHRMYVKFICKPVPPKEDKET
Ga0208668_106394123300025078MarineGHFVKMKIMLIVYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKNRMYVKFICKTVPVEEKKT
Ga0208668_108907313300025078MarineMKIMLIIYICATAGGVCDTWVKETHFDDWDSCMRAGYKNSLEFIEEAGSEYVNKHRMYVKFICKNVPPKKDEET
Ga0208156_108663023300025082MarineMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKKAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0208156_109389313300025082MarineMLIIYICASIGGTCDTWVKKPHFDDWDSCMRAGYTNSLEFIKEAGSEYVNKHRMYVKFICKEAPVKKDKET
Ga0208010_111108813300025097MarineNIGFYGHFVKMKIMLIVYICTSIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKNRMYVKFLCKRVPVEEKKT
Ga0208553_105128733300025109MarineMLIVYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKNRMYVKFICKTVPVEEKKT
Ga0208553_107794833300025109MarineMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKVNKIEKGV
Ga0208433_100518513300025114MarineMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYTNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEET
Ga0208790_121494523300025118MarineCDSWVKETHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRIYVKFICKPVPPKEDKET
Ga0209434_108786433300025122MarineMKIMLIVYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKNRMYVKFICKTVPVEEKKT
Ga0209644_101137223300025125MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0208919_102963613300025128MarineYICASIGGTCDTWVKTPQFDDWDSCMRAGYRDSLKFIEEAGTEHVNKHRMYVKFICKEAPAKKDEAT
Ga0209128_100439183300025131MarineMLIIYICATVGGICDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEET
Ga0209128_115852943300025131MarineMKIMLVILICSSIQGQCDTWVKTPQFDDWHSCMLAGYKDSLKLIEEAGPEYVNKHRMYVK
Ga0209232_120742533300025132MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAP
Ga0208299_109158323300025133MarineGICDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEHVNKHRMYVKFICKNVPPKKDEET
Ga0208299_115186543300025133MarineMLILYICASIGGTCDTWVKTPHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKE
Ga0207894_104835213300025268Deep OceanGFYGHFVKMKIMLIIYICTSIGGICDTWVKETHFDDWDSCMRQGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0207894_106992313300025268Deep OceanMKIMLIIYICASIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTVPVEEKKT
Ga0208699_101030113300025776Deep OceanMLILYICASIGGTCDTWVKKPHFDDWDSCMRAGYANSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKD
Ga0209757_1007561853300025873MarineGGMCDTWVKTPQFDDWDSCMRTGYRDSLKLIEEAGSEYVNKHRMYVKFICKEAPVEKDKE
Ga0208274_105080653300026188MarineMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFR
Ga0208274_106939633300026188MarineMLILYICASIGGTCDIWVKKPYFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKKDEET
Ga0207986_101281043300026192MarineMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAPVEEKKT
Ga0207986_104818323300026192MarineYICATVGGTCDTWVKKPHFDDWDSCMRAGYRDSLKFIEEAGTEHVNKHRMYVKFICKEAPAKKDEAT
Ga0207984_101042663300026202MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0207984_107758223300026202MarineMKIMLIIYICATVGGICDTWVKETHFDDWDSCMRAGYSNSLELIKEAGPEYVNKHRIYVKFICKNVPPKKVNKIEKGV
Ga0208408_103171073300026260MarineMLIIYICASIGGTCDTWVKKPYFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKNVPSKKDEEL
Ga0208408_109613213300026260MarineMKIMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVK
Ga0207990_103521433300026262MarineMKIMLILYVCATVGGVCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0208641_103263613300026268MarineMLIVYICASIGGTCDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFICKTAP
Ga0208411_101117663300026279MarineMLIIYICTSIGGICDTWVKETHFDDWDSCMRAGYTTSLDLIKEAGPEYVNKSRMYVKFRCREVPIREEKI
Ga0208411_101256593300026279MarineMLILYICASIGSTCDTWVKETHFDDWDSCMRAGYTNSLEFIEEAGSEYVNKHRMYVKFICKEAPVKEDKET


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