NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087019

Metagenome / Metatranscriptome Family F087019

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087019
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 38 residues
Representative Sequence MIGELIGLGFVILFMLVSLTAVGFIIADSNYDKKRKDD
Number of Associated Samples 68
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 88.18 %
% of genes near scaffold ends (potentially truncated) 20.00 %
% of genes from short scaffolds (< 2000 bps) 75.45 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (38.182 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(37.273 % of family members)
Environment Ontology (ENVO) Unclassified
(54.545 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(88.182 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.55%    β-sheet: 0.00%    Coil/Unstructured: 45.45%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF03083MtN3_slv 43.64
PF13155Toprim_2 3.64
PF00476DNA_pol_A 1.82
PF11753DUF3310 0.91
PF10544T5orf172 0.91
PF00268Ribonuc_red_sm 0.91
PF02867Ribonuc_red_lgC 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG4095Sugar transporter, SemiSWEET family, contains PQ motifCarbohydrate transport and metabolism [G] 43.64
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 1.82
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 0.91
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.55 %
UnclassifiedrootN/A25.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10131527Not Available886Open in IMG/M
3300000116|DelMOSpr2010_c10183473All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300000116|DelMOSpr2010_c10209346All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300000116|DelMOSpr2010_c10241968All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300000117|DelMOWin2010_c10104718All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300001826|ACM20_101622All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300001827|ACM21_1013429All Organisms → Viruses → Predicted Viral1299Open in IMG/M
3300005512|Ga0074648_1004226All Organisms → Viruses11591Open in IMG/M
3300005512|Ga0074648_1004984Not Available10362Open in IMG/M
3300005613|Ga0074649_1005163All Organisms → cellular organisms → Bacteria11542Open in IMG/M
3300006025|Ga0075474_10079098Not Available1079Open in IMG/M
3300006026|Ga0075478_10174970All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300006752|Ga0098048_1002494Not Available7733Open in IMG/M
3300006802|Ga0070749_10110027All Organisms → Viruses → Predicted Viral1624Open in IMG/M
3300006802|Ga0070749_10140957All Organisms → Viruses → Predicted Viral1407Open in IMG/M
3300006810|Ga0070754_10145370All Organisms → Viruses → Predicted Viral1137Open in IMG/M
3300006810|Ga0070754_10378800All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300006810|Ga0070754_10537874All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300006867|Ga0075476_10188570Not Available755Open in IMG/M
3300006874|Ga0075475_10384461Not Available566Open in IMG/M
3300006919|Ga0070746_10025799All Organisms → Viruses → Predicted Viral3197Open in IMG/M
3300006919|Ga0070746_10073848All Organisms → Viruses → Predicted Viral1735Open in IMG/M
3300007346|Ga0070753_1279440All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300007346|Ga0070753_1346908Not Available524Open in IMG/M
3300007539|Ga0099849_1122066All Organisms → Viruses → Predicted Viral1024Open in IMG/M
3300007539|Ga0099849_1356593All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300007540|Ga0099847_1015358All Organisms → Viruses → Predicted Viral2515Open in IMG/M
3300007540|Ga0099847_1066463All Organisms → Viruses → Predicted Viral1119Open in IMG/M
3300007540|Ga0099847_1068551All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300009001|Ga0102963_1023099All Organisms → Viruses → Predicted Viral2614Open in IMG/M
3300009507|Ga0115572_10051417All Organisms → Viruses → Predicted Viral2614Open in IMG/M
3300010296|Ga0129348_1037037All Organisms → Viruses → Predicted Viral1772Open in IMG/M
3300010296|Ga0129348_1206213Not Available668Open in IMG/M
3300010297|Ga0129345_1162951Not Available802Open in IMG/M
3300010297|Ga0129345_1176081All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300010300|Ga0129351_1304889All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300010300|Ga0129351_1335803All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300010318|Ga0136656_1217319All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300010389|Ga0136549_10060703All Organisms → Viruses → Predicted Viral1905Open in IMG/M
3300012525|Ga0129353_1493111All Organisms → Viruses → Predicted Viral1536Open in IMG/M
3300013231|Ga0116832_1070470All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300017963|Ga0180437_11039004All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300017967|Ga0181590_10046023All Organisms → Viruses → Predicted Viral3493Open in IMG/M
3300017967|Ga0181590_11029196All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300017985|Ga0181576_10422993All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300017986|Ga0181569_10413939Not Available921Open in IMG/M
3300018041|Ga0181601_10540592All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300018080|Ga0180433_10889442All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300018416|Ga0181553_10586828Not Available589Open in IMG/M
3300018420|Ga0181563_10355578Not Available844Open in IMG/M
3300018420|Ga0181563_10767829All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300018426|Ga0181566_10555402All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300018876|Ga0181564_10634553All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300020055|Ga0181575_10579180Not Available590Open in IMG/M
3300020191|Ga0181604_10061730All Organisms → Viruses → Predicted Viral2136Open in IMG/M
3300020439|Ga0211558_10012795All Organisms → Viruses → Predicted Viral4336Open in IMG/M
3300020439|Ga0211558_10186685Not Available992Open in IMG/M
3300020439|Ga0211558_10208940Not Available929Open in IMG/M
3300021356|Ga0213858_10001130All Organisms → cellular organisms → Bacteria12673Open in IMG/M
3300021356|Ga0213858_10015899All Organisms → Viruses → Predicted Viral3569Open in IMG/M
3300021356|Ga0213858_10599864Not Available500Open in IMG/M
3300021364|Ga0213859_10056958All Organisms → Viruses → Predicted Viral1858Open in IMG/M
3300021368|Ga0213860_10030482All Organisms → Viruses → Predicted Viral2266Open in IMG/M
3300021368|Ga0213860_10504577All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300021371|Ga0213863_10017249All Organisms → Viruses → Predicted Viral4237Open in IMG/M
3300021371|Ga0213863_10036666All Organisms → Viruses → Predicted Viral2654Open in IMG/M
3300021373|Ga0213865_10020245All Organisms → Viruses → Predicted Viral3765Open in IMG/M
3300021373|Ga0213865_10028736All Organisms → Viruses → Predicted Viral3123Open in IMG/M
3300021373|Ga0213865_10185554All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300021373|Ga0213865_10219681All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300021389|Ga0213868_10351569Not Available829Open in IMG/M
3300021425|Ga0213866_10028427All Organisms → Viruses → Predicted Viral3271Open in IMG/M
3300021425|Ga0213866_10167893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.1154Open in IMG/M
3300021425|Ga0213866_10203699All Organisms → Viruses → Predicted Viral1026Open in IMG/M
3300021425|Ga0213866_10343404Not Available739Open in IMG/M
3300021425|Ga0213866_10598205All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300021958|Ga0222718_10031017All Organisms → Viruses → Predicted Viral3576Open in IMG/M
3300021958|Ga0222718_10089595All Organisms → Viruses → Predicted Viral1834Open in IMG/M
3300021958|Ga0222718_10424823All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300021958|Ga0222718_10453878All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300022050|Ga0196883_1000184Not Available6456Open in IMG/M
3300022068|Ga0212021_1045703All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300022071|Ga0212028_1042967All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300022168|Ga0212027_1052125Not Available511Open in IMG/M
3300022183|Ga0196891_1027084All Organisms → Viruses → Predicted Viral1083Open in IMG/M
3300022187|Ga0196899_1074644All Organisms → Viruses → Predicted Viral1050Open in IMG/M
3300022187|Ga0196899_1115846All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300022187|Ga0196899_1133917All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300022200|Ga0196901_1074897All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300022200|Ga0196901_1122595Not Available888Open in IMG/M
3300022929|Ga0255752_10013282All Organisms → cellular organisms → Bacteria6690Open in IMG/M
3300022929|Ga0255752_10092780All Organisms → Viruses → Predicted Viral1670Open in IMG/M
3300023116|Ga0255751_10057462All Organisms → Viruses → Predicted Viral2627Open in IMG/M
3300024262|Ga0210003_1114664All Organisms → Viruses → Predicted Viral1204Open in IMG/M
3300025070|Ga0208667_1000113Not Available36067Open in IMG/M
3300025671|Ga0208898_1097961All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300025671|Ga0208898_1148419Not Available637Open in IMG/M
3300025674|Ga0208162_1179509Not Available555Open in IMG/M
3300025759|Ga0208899_1049172All Organisms → Viruses → Predicted Viral1817Open in IMG/M
3300025771|Ga0208427_1154187Not Available756Open in IMG/M
3300025771|Ga0208427_1258303All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300025853|Ga0208645_1105551Not Available1156Open in IMG/M
3300025853|Ga0208645_1201980All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300025853|Ga0208645_1301895Not Available502Open in IMG/M
3300026138|Ga0209951_1015685All Organisms → Viruses → Predicted Viral1678Open in IMG/M
3300029448|Ga0183755_1003270All Organisms → cellular organisms → Bacteria8170Open in IMG/M
3300031578|Ga0307376_10008090All Organisms → Viruses9082Open in IMG/M
3300034374|Ga0348335_141262Not Available675Open in IMG/M
3300034418|Ga0348337_033011All Organisms → Viruses → Predicted Viral2342Open in IMG/M
3300034418|Ga0348337_189914All Organisms → cellular organisms → Bacteria525Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous37.27%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater16.36%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh13.64%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.36%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine4.55%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine3.64%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.64%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.73%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton1.82%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.82%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment1.82%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.82%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.91%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.91%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.91%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.91%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001826Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM20, ROCA_DNA104_0.2um_23bEnvironmentalOpen in IMG/M
3300001827Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM21, ROCA_DNA110_2.0um_23kEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300012525Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013231Marine hypoxic microbial communities from the Gulf of Mexico, USA - 5m_Station5_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1013152733300000116MarineIGLGFVILFMLVSLTAVGFLIADRNYDNKRKEDK*
DelMOSpr2010_1018347323300000116MarineMIGEIIGLVFVIGFMLFCLVGVGFIIADSNYDKKRKND*
DelMOSpr2010_1020934623300000116MarineMIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD*
DelMOSpr2010_1024196833300000116MarineMIGEVIGLMLVIGFMLFCLVGVAFIIADSNYDKKRKXD*
DelMOWin2010_1010471833300000117MarineMIGEVIGLMFVIGFMLFCLVGVAFIIADRDYDKKNKDN*
ACM20_10162243300001826Marine PlanktonMIGEVIGLGFVILFMLVSLTAIGFIIADSDYDKKKKDD*
ACM21_101342943300001827Marine PlanktonMIGELIGLGFVILFMLVSLTAIGFIIADSDYDKKKKGRLIGI*
Ga0074648_100422623300005512Saline Water And SedimentMIGEIIGLGFVILFMLVSLTAVGFIIADSDYDKKRKDD*
Ga0074648_1004984163300005512Saline Water And SedimentMIGEIIGLAFVTVFMLFCLIGVTFLIADRHYDKKRKDN*
Ga0074649_1005163123300005613Saline Water And SedimentMIGEIIGLGFVTVFMLFCLIGVTFLIADRHYDKKRKDN*
Ga0075474_1007909843300006025AqueousMIGEVIGLMFVIGFMLFCLVGVAFIIADSNYDKKRKDD*
Ga0075478_1017497023300006026AqueousMIGEVIGLMLVIGFMLFCLVGVAFIIADSNYDKKRKDD*
Ga0098048_1002494103300006752MarineMIGELIGLAFVIGFMLVSLTAVGFIIADRNYDNKRKND*
Ga0070749_1011002713300006802AqueousMIGEVIGLMFVIGFMLFCLVGVAFIIADKNYDNKKKND*LV
Ga0070749_1014095733300006802AqueousMIGEIIGLGFVILFMLVSLTAVGFLIADRNYDNKRKDD*
Ga0070754_1014537023300006810AqueousMIGEIIGLVFVTVFMLFCLVGVGFIIADSNYDKKNKDN*
Ga0070754_1037880033300006810AqueousMIGEIIGLVFVIGFMLFCLIGVGFLITDRDYDKKNKNN*
Ga0070754_1053787423300006810AqueousMIGEIIGLGFVILFMLVSLTAVGFLIADRNYDKKRKDD*
Ga0075476_1018857033300006867AqueousIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD*
Ga0075475_1038446113300006874AqueousMIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD*LVFEM
Ga0070746_10025799113300006919AqueousMIGEIIGLVFVIGFMLFCLVGVGFIIADSNYDKKRKDD*
Ga0070746_1007384813300006919AqueousEIIGLGFVILFMLVSLTAVGFLIADRNYDNKRKDD*
Ga0070753_127944013300007346AqueousMIGELIGLGFVILFMLVSLTAVGFIIADSNYDKKRKDD*
Ga0070753_134690833300007346AqueousMIAEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD*LVF
Ga0099849_112206653300007539AqueousMIGDLIGLVFVIGFMLFCLVGVRFIIADSNYDKKRKD
Ga0099849_135659323300007539AqueousMIGEIIGLGFVILFMLVSLTAVGFIIADRNYDNKRKDD*
Ga0099847_1015358103300007540AqueousMIGEIIGLGFVILFMSVSLTAVGFLIADRNYDNKRKDD*
Ga0099847_106646353300007540AqueousMIGEIIGLGFVILFMSVSLTAVGFLIADSNYDKKRKDD*
Ga0099847_106855123300007540AqueousMIGELIGLALVIGFMLVSLTAVGFIIADRNYDNKKKND*
Ga0102963_102309993300009001Pond WaterMIGELIGLGFVILFMLVSLTAVGFIIADSDYDKKRKDD*
Ga0115572_1005141753300009507Pelagic MarineMIGEVIGLMFVIGFMLFCLVGVAFIIADKNYDNKKKND*
Ga0129348_103703773300010296Freshwater To Marine Saline GradientMIGDIIGLAFVILFMLVSLTAVGFIIADSNYDKKRKDD*
Ga0129348_120621333300010296Freshwater To Marine Saline GradientMIGEIIGLVFVIGFMLFCLVGVGFIIADSNYDKKRKDD*LVFEMG
Ga0129345_116295113300010297Freshwater To Marine Saline GradientMIGEIIGLGFVILFMLVSLTAVGFLIADRHYDDKRKEDK*
Ga0129345_117608123300010297Freshwater To Marine Saline GradientMIGEIIGLGFVILFMLVSLTAVGFLIADSNYDKKRKDD*
Ga0129351_130488923300010300Freshwater To Marine Saline GradientMIGEIIGLIFVTVFMLFCLVGVGFIIADSNYDKKKKDD*
Ga0129351_133580323300010300Freshwater To Marine Saline GradientMIGELIGLAFVILFMLVSLTAVGFIIADRNYDNKKKND*
Ga0136656_121731923300010318Freshwater To Marine Saline GradientMIGDLIGLTVVILFMLFCLVGVAFIIADSNYDKKRKDD*
Ga0136549_1006070343300010389Marine Methane Seep SedimentMIGEVIGLAFVIGFMLLCLVGVGLILADRNYDKKRKEDK*
Ga0129353_149311153300012525AqueousMIGEIIGLGFVILFMLVSLTAVGFIIADSNYDKKRKDD*
Ga0116832_107047023300013231MarineMIGEIIGLGFVILFMLVSLTAVGFLIADRHYDDKRKDN*
Ga0180437_1103900423300017963Hypersaline Lake SedimentMIGELIGLGFVILFMLVSLTAVGFIIADSDYDKKKKDD
Ga0181590_1004602323300017967Salt MarshMIGEIIGLGFVILFMLVSLTAVGFLIADRHYDDKRKDN
Ga0181590_1102919623300017967Salt MarshMIGEVIGLGFVILFMLVCLTAVGFIIADSDYDKKRKDD
Ga0181576_1042299333300017985Salt MarshMIGEIIGLGFVILFMLVSLTAVGFLIADRHYDDKRKDD
Ga0181569_1041393923300017986Salt MarshMIGELIGLAFVILFMLVSLTAVGFLIADRHYDDKRKDN
Ga0181601_1054059223300018041Salt MarshMIGELIGLAFVIGFMLFCIAGVGLILADKNYDNKRKDD
Ga0180433_1088944233300018080Hypersaline Lake SedimentMIGELIGLAFVIGFMLFCIAGVGLILADRNYDKKRKDD
Ga0181553_1058682833300018416Salt MarshMIGELIGLAVVILFMLVSLTAVGFIIADSNYDKKRKDD
Ga0181563_1035557823300018420Salt MarshMIGELIGLAFVIGFMLFCIAGVGIILADKNYDNKRKDD
Ga0181563_1076782923300018420Salt MarshMIGELIGLAFVILFMLVSLTAVGFIIADSNYDKKRKDD
Ga0181566_1055540233300018426Salt MarshMIGQIIGLGFVILFMLVSLTAVGFLIADRHYDDKRKDN
Ga0181564_1063455313300018876Salt MarshMIGELIGLALVILFMLVSLTAVGFIIADSNYDKKRKDD
Ga0181575_1057918023300020055Salt MarshMIGQIIGLGFVILFMLVSLTAVGFLIADRHYDDKRKEDK
Ga0181604_1006173013300020191Salt MarshIGELIGLAFVIGFMLFCIAGVGLILADKNYDNKRKDD
Ga0211558_1001279533300020439MarineMIGELIGLAFVILFMLVSLTAVGFLILDRDYDKKKKDD
Ga0211558_1018668523300020439MarineMIGELIGLGFVILFMLVSLTAVGIILADKNYDKKRKDD
Ga0211558_1020894023300020439MarineMIGELIGLGFVILFMLVSLTAVGFIIADSDYDKKRKDDK
Ga0213858_10001130123300021356SeawaterMIGELIGLGFVILFMLVSLTAVGFIIADSNYDKKRKEDK
Ga0213858_1001589933300021356SeawaterMISELIGLGFVILFMLVSLTAVGFIIADSDYDKKRKDD
Ga0213858_1059986433300021356SeawaterMIGELIGLGLVILFMLVSLTAVGFIIADSDYDKKRKKDK
Ga0213859_1005695893300021364SeawaterMIGELIGLGFVILFMLVSLTAVGFIIADSNYDNKKKND
Ga0213860_1003048273300021368SeawaterMIGDIIGLAFVILFMLVSLTAVGFIIADSNYDKKRKDD
Ga0213860_1050457723300021368SeawaterMIGELIGLGFVILFMLVSLTAVGFLIADRHYDDKRKDD
Ga0213863_1001724933300021371SeawaterMIGELIGLTFVIGFMLFCIAGVGLILADKNYDNKRKDD
Ga0213863_10036666103300021371SeawaterMIGDIIGLGLVILFMLVSLTAVGFIIADSNYDKKRKDD
Ga0213865_1002024583300021373SeawaterMIGDLIGLGFVILFMLVSLTAVGFIIADSDYDKKRKDD
Ga0213865_1002873623300021373SeawaterMIGELIGLALVIGFMLVSLTAVGFIIADRNYDNKKKND
Ga0213865_1018555423300021373SeawaterMIGELIGLAFVIGFILFCIAGVGIILADSNYDKKKKND
Ga0213865_1021968133300021373SeawaterMIGELIGLAFVIGFMLFCIIGVGLILADKNYDNKRKDD
Ga0213868_1035156933300021389SeawaterMIGEIIGLGFVILFMLVSLTAVGFLIADRNYDNKRKDD
Ga0213866_1002842733300021425SeawaterMIGELIGLAFVILFMLVSLTAVGFLILDRDYDKKKKEDK
Ga0213866_1016789313300021425SeawaterMIGELIGLAFVILFMLVSLTAVGFIIADRDYDKKRKEDKXTYF
Ga0213866_1020369933300021425SeawaterMIGELIGLAFVILFMLVSLTAVGFIIADSDYDKKRKDD
Ga0213866_1034340433300021425SeawaterMIGELIGLAVVILFMLVSLTAVGFIIADSNYDKKRKDDK
Ga0213866_1059820523300021425SeawaterMIGQIIGLAFVTVFMLFCLIGVTFLIADRHYDKKRKDN
Ga0222718_1003101743300021958Estuarine WaterMIGELIGLGFIILFMLVSLTAVGFIIADSDYDKKRKDD
Ga0222718_1008959563300021958Estuarine WaterMIGEVIGLMFVIGFMLFCLVGVALIIADKNYDNKKKND
Ga0222718_1042482323300021958Estuarine WaterMIGELIGLGFVILFMLVSLTAVGFIIADSNYDKKRKDN
Ga0222718_1045387823300021958Estuarine WaterMIGDLIGLTVVILFMLFCLVGVAFIIADSNYDKKRKDD
Ga0196883_100018493300022050AqueousMIGEIIGLVFVIGFMLFCLIGVGFLITDRDYDKKNKNN
Ga0212021_104570333300022068AqueousMIGEVIGLMFVIGFMLFCLVGVAFIIADSNYDKKRKDD
Ga0212028_104296723300022071AqueousMIGEVIGLMFVIGFMLFCLVGVAFIIADRDYDKKNKDN
Ga0212027_105212513300022168AqueousMIGEIIGLVFVTVFMLFCLVGVGFIIADSNYDKKNKDNXLV
Ga0196891_102708433300022183AqueousMIGEIIGLVFVIGFMLFCLVGVGFIIADSNYDKKRKDD
Ga0196899_107464453300022187AqueousMIGEIIGLGFVILFMLVSLTAVGFLIADRNYDKKRKDD
Ga0196899_111584643300022187AqueousMIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD
Ga0196899_113391723300022187AqueousMIGEVIGLMLVIGFMLFCLVGVAFIIADSNYDKKRKDD
Ga0196901_107489713300022200AqueousRGGQMIGDLIGLTVVILFMLFCLVGVAFIIADSNYDKKRKDD
Ga0196901_112259543300022200AqueousMIGDLIGLTVVILFMLFCLVGVAFIIADSNYDKKRKDDXLV
Ga0255752_1001328223300022929Salt MarshMIGELIGLAVVILFMLVSLTAVGFIIADSNYDKKKKDD
Ga0255752_1009278073300022929Salt MarshMIGELIGLGFVILFMLVSLTAVGFIIADSNYDKKRKDD
Ga0255751_1005746233300023116Salt MarshMIGEIIGLGFVILFMLVSLTAVGFIIADRHYDDKRKDN
Ga0210003_111466443300024262Deep SubsurfaceMIGDIIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD
Ga0208667_1000113233300025070MarineMIGELIGLAFVIGFMLVSLTAVGFIIADRNYDNKRKND
Ga0208898_109796133300025671AqueousMIGEIIGLVFVTVFMLFCLVGVGFIIADSNYDKKNKDN
Ga0208898_114841933300025671AqueousMIGEVIGLMFVIGFMLFCLVGVAFLIADRNYDNKRKDD
Ga0208162_117950923300025674AqueousMIGEIIGLGFVILFMLVSLTAVGFLIADRHYDDKRKEDK
Ga0208899_104917213300025759AqueousMIGEIIGLGFVILFMLVSLTAVGFLIADRNYDNKRKD
Ga0208427_115418713300025771AqueousMIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDDXLVFEMGCK
Ga0208427_125830333300025771AqueousIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD
Ga0208645_110555133300025853AqueousMIREVIGLIFVISFMLFCLAGVGFLIADSNYDNKKKDD
Ga0208645_120198033300025853AqueousMIGEIIGLMLVIGFMLFCLVGVGFIIADSNYDKKRKDD
Ga0208645_130189533300025853AqueousMIAEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD
Ga0209951_101568523300026138Pond WaterMIGELIGLGFVILFMLVSLTAVGFIIADSDYDKKRKDN
Ga0183755_1003270113300029448MarineMIGEVIGLMLVIGFMLFCLVGVAFIIADKNYDNKKKND
Ga0307376_1000809013300031578SoilSRMIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDD
Ga0348335_141262_2_1243300034374AqueousMIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDDWLV
Ga0348337_033011_2_1393300034418AqueousMIGEVIGLMFVIGFMLFCLVGVGFIIADSNYDKKRKDDWLVFEMGC
Ga0348337_189914_210_3263300034418AqueousMIGEVIGLIFVISFMLFCLAGVGFLIADSNYDNKKKDD


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