NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F087018

Metagenome Family F087018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087018
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 50 residues
Representative Sequence MTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESTDWNISDNH
Number of Associated Samples 71
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Viruses
% of genes with valid RBS motifs 20.91 %
% of genes near scaffold ends (potentially truncated) 30.00 %
% of genes from short scaffolds (< 2000 bps) 85.45 %
Associated GOLD sequencing projects 62
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Predicted Viral (32.727 % of family members)
NCBI Taxonomy ID 10239 (predicted)
Taxonomy All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(25.455 % of family members)
Environment Ontology (ENVO) Unclassified
(74.545 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.636 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.00%    β-sheet: 0.00%    Coil/Unstructured: 60.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13619KTSC 15.45
PF02511Thy1 7.27
PF14700RPOL_N 1.82
PF05367Phage_endo_I 0.91
PF17212Tube 0.91
PF14279HNH_5 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 7.27


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.18 %
UnclassifiedrootN/A31.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10059238All Organisms → Viruses → Predicted Viral1621Open in IMG/M
3300000116|DelMOSpr2010_c10069560All Organisms → Viruses → Predicted Viral1438Open in IMG/M
3300000116|DelMOSpr2010_c10082682All Organisms → Viruses → Predicted Viral1265Open in IMG/M
3300000117|DelMOWin2010_c10052372All Organisms → Viruses → Predicted Viral1790Open in IMG/M
3300000117|DelMOWin2010_c10053298All Organisms → Viruses → Predicted Viral1765Open in IMG/M
3300000117|DelMOWin2010_c10204813Not Available605Open in IMG/M
3300000117|DelMOWin2010_c10226725Not Available559Open in IMG/M
3300001935|GOS2223_1020696All Organisms → Viruses → Predicted Viral1438Open in IMG/M
3300001947|GOS2218_1016386All Organisms → Viruses → Predicted Viral1431Open in IMG/M
3300001947|GOS2218_1024178All Organisms → Viruses → Predicted Viral1634Open in IMG/M
3300002040|GOScombined01_106561238All Organisms → Viruses → Predicted Viral2030Open in IMG/M
3300005920|Ga0070725_10536273Not Available528Open in IMG/M
3300006026|Ga0075478_10118172All Organisms → Viruses838Open in IMG/M
3300006752|Ga0098048_1003809All Organisms → Viruses6058Open in IMG/M
3300006752|Ga0098048_1160875All Organisms → Viruses668Open in IMG/M
3300006793|Ga0098055_1080142All Organisms → Viruses → Predicted Viral1285Open in IMG/M
3300006793|Ga0098055_1102472Not Available1118Open in IMG/M
3300006793|Ga0098055_1148788All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales901Open in IMG/M
3300006793|Ga0098055_1194556All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1771Open in IMG/M
3300006793|Ga0098055_1267044Not Available642Open in IMG/M
3300006793|Ga0098055_1383292All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae521Open in IMG/M
3300006810|Ga0070754_10456603Not Available553Open in IMG/M
3300006916|Ga0070750_10397511Not Available576Open in IMG/M
3300006920|Ga0070748_1201970All Organisms → Viruses726Open in IMG/M
3300006921|Ga0098060_1020519All Organisms → Viruses → Predicted Viral2055Open in IMG/M
3300006924|Ga0098051_1189972Not Available538Open in IMG/M
3300006924|Ga0098051_1211859All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales504Open in IMG/M
3300006925|Ga0098050_1127948All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1644Open in IMG/M
3300006925|Ga0098050_1151739All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales583Open in IMG/M
3300006925|Ga0098050_1170653All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales545Open in IMG/M
3300006925|Ga0098050_1178233All Organisms → Viruses532Open in IMG/M
3300007543|Ga0102853_1025252All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae989Open in IMG/M
3300007863|Ga0105744_1057625All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus958Open in IMG/M
3300007956|Ga0105741_1012944All Organisms → Viruses → Predicted Viral2127Open in IMG/M
3300007973|Ga0105746_1238742All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1625Open in IMG/M
3300009071|Ga0115566_10220285All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP11149Open in IMG/M
3300009079|Ga0102814_10053888All Organisms → Viruses → Predicted Viral2228Open in IMG/M
3300010149|Ga0098049_1145950All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1732Open in IMG/M
3300010150|Ga0098056_1078127Not Available1133Open in IMG/M
3300017708|Ga0181369_1117695Not Available541Open in IMG/M
3300017709|Ga0181387_1059557All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1764Open in IMG/M
3300017713|Ga0181391_1042461All Organisms → Viruses → Predicted Viral1087Open in IMG/M
3300017714|Ga0181412_1155811All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae512Open in IMG/M
3300017719|Ga0181390_1047449All Organisms → Viruses → Predicted Viral1273Open in IMG/M
3300017720|Ga0181383_1154672Not Available615Open in IMG/M
3300017725|Ga0181398_1020838All Organisms → Viruses → Predicted Viral1632Open in IMG/M
3300017728|Ga0181419_1010172All Organisms → Viruses → Predicted Viral2789Open in IMG/M
3300017737|Ga0187218_1029655All Organisms → Viruses → Predicted Viral1403Open in IMG/M
3300017738|Ga0181428_1000766All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales7544Open in IMG/M
3300017749|Ga0181392_1017217All Organisms → Viruses → Predicted Viral2321Open in IMG/M
3300017749|Ga0181392_1164504Not Available647Open in IMG/M
3300017768|Ga0187220_1144545All Organisms → Viruses719Open in IMG/M
3300017770|Ga0187217_1207440Not Available647Open in IMG/M
3300017770|Ga0187217_1314412Not Available503Open in IMG/M
3300017772|Ga0181430_1170717Not Available628Open in IMG/M
3300017776|Ga0181394_1034211All Organisms → Viruses → Predicted Viral1768Open in IMG/M
3300017776|Ga0181394_1069775All Organisms → Viruses → Predicted Viral1155Open in IMG/M
3300017782|Ga0181380_1106157All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales972Open in IMG/M
3300017782|Ga0181380_1243860Not Available597Open in IMG/M
3300017783|Ga0181379_1120246All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1950Open in IMG/M
3300017783|Ga0181379_1154921Not Available816Open in IMG/M
3300019756|Ga0194023_1020922All Organisms → Viruses1323Open in IMG/M
3300020352|Ga0211505_1148445Not Available551Open in IMG/M
3300020428|Ga0211521_10285897All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae736Open in IMG/M
3300021371|Ga0213863_10005397Not Available8447Open in IMG/M
3300021371|Ga0213863_10088764All Organisms → Viruses → Predicted Viral1501Open in IMG/M
3300021958|Ga0222718_10020066All Organisms → Viruses → Predicted Viral4665Open in IMG/M
3300021958|Ga0222718_10054787All Organisms → Viruses → Predicted Viral2512Open in IMG/M
3300021958|Ga0222718_10118560All Organisms → Viruses → Predicted Viral1534Open in IMG/M
3300021958|Ga0222718_10119651All Organisms → Viruses → Predicted Viral1525Open in IMG/M
3300021958|Ga0222718_10285261All Organisms → Viruses863Open in IMG/M
3300021959|Ga0222716_10700425Not Available538Open in IMG/M
3300021960|Ga0222715_10703135All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1509Open in IMG/M
3300021964|Ga0222719_10789770Not Available523Open in IMG/M
3300021964|Ga0222719_10797125Not Available520Open in IMG/M
3300022065|Ga0212024_1080873Not Available578Open in IMG/M
3300022069|Ga0212026_1076900All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1507Open in IMG/M
(restricted) 3300023210|Ga0233412_10517141Not Available540Open in IMG/M
(restricted) 3300024062|Ga0255039_10071325All Organisms → Viruses → Predicted Viral1348Open in IMG/M
(restricted) 3300024062|Ga0255039_10192994Not Available848Open in IMG/M
(restricted) 3300024062|Ga0255039_10361106Not Available625Open in IMG/M
(restricted) 3300024255|Ga0233438_10123292All Organisms → Viruses → Predicted Viral1147Open in IMG/M
(restricted) 3300024519|Ga0255046_10301224All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1749Open in IMG/M
3300025070|Ga0208667_1000229All Organisms → Viruses26194Open in IMG/M
3300025070|Ga0208667_1002110All Organisms → Viruses6701Open in IMG/M
3300025084|Ga0208298_1018078All Organisms → Viruses → Predicted Viral1599Open in IMG/M
3300025084|Ga0208298_1033509All Organisms → Viruses → Predicted Viral1065Open in IMG/M
3300025085|Ga0208792_1030946All Organisms → Viruses → Predicted Viral1062Open in IMG/M
3300025085|Ga0208792_1061826All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1688Open in IMG/M
3300025085|Ga0208792_1066758All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1655Open in IMG/M
3300025099|Ga0208669_1006054All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae3659Open in IMG/M
3300025108|Ga0208793_1097029Not Available831Open in IMG/M
3300025168|Ga0209337_1258157Not Available662Open in IMG/M
3300025759|Ga0208899_1222948Not Available581Open in IMG/M
3300025840|Ga0208917_1170501Not Available744Open in IMG/M
3300025890|Ga0209631_10188939All Organisms → Viruses → Predicted Viral1071Open in IMG/M
3300025890|Ga0209631_10357314Not Available688Open in IMG/M
3300027845|Ga0209271_10390520Not Available549Open in IMG/M
3300028125|Ga0256368_1079003Not Available560Open in IMG/M
3300029448|Ga0183755_1015494All Organisms → Viruses → Predicted Viral2728Open in IMG/M
3300029448|Ga0183755_1045358All Organisms → Viruses → Predicted Viral1149Open in IMG/M
3300029448|Ga0183755_1077408All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1721Open in IMG/M
3300031519|Ga0307488_10268249All Organisms → Viruses → Predicted Viral1116Open in IMG/M
3300031569|Ga0307489_10192004All Organisms → Viruses → Predicted Viral1260Open in IMG/M
3300031569|Ga0307489_10866692All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales639Open in IMG/M
3300032073|Ga0315315_10074321All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae3154Open in IMG/M
3300032277|Ga0316202_10490021All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1577Open in IMG/M
3300033742|Ga0314858_090592All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1772Open in IMG/M
3300033742|Ga0314858_156214Not Available586Open in IMG/M
3300033742|Ga0314858_176036Not Available550Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine25.45%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater22.73%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water8.18%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous7.27%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine6.36%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.55%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine3.64%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.64%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine2.73%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.73%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.82%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment1.82%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.82%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.82%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.82%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.91%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.91%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.91%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.91%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001935Marine microbial communities from Northern Gulf of Maine, Canada - GS007EnvironmentalOpen in IMG/M
3300001947Marine microbial communities from the Gulf of Maine, Canada - GS002EnvironmentalOpen in IMG/M
3300002040GS000c - Sargasso Station 3EnvironmentalOpen in IMG/M
3300005920Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2EnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300007543Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3EnvironmentalOpen in IMG/M
3300007863Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2umEnvironmentalOpen in IMG/M
3300007956Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459A_0.2umEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300020352Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022069Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300027845Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1005923853300000116MarineMNKEQLIALATKKYHEQLQREYNYRQAIRDGLIERVESTSWNISDNH*
DelMOSpr2010_1006956043300000116MarineMNKEQLIASATKRYHEQLQREYNYRQAIRDGLIQPFDAKTIEYWNISDNH*
DelMOSpr2010_1008268243300000116MarineMSNTYTMTKEQLIALATKRYHEQLQREYNYRQAIRDGSIQPFDAKTIEYWNISDND*
DelMOWin2010_1005237243300000117MarineMTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESTDWNISDNH*
DelMOWin2010_1005329823300000117MarineMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERCESTNWNIADKD*
DelMOWin2010_1020481313300000117MarineKEQLIALATKRYHEQLQREYHYRQAIRDGSIQPFDAKTIEYWDIADKD*
DelMOWin2010_1022672513300000117MarineFQTCNSIINNTYTMTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERVESTNWNISDNH
GOS2223_102069643300001935MarineMSNTYTMTKEQLIALATKRYHEQLQREYNYRQAIRDGLIERVESTRWEHLRQ*
GOS2218_101638653300001947MarineIALATKRYHEQLQREYNYRQAIRDGSIQPFDPKTIEYWDIADND*
GOS2218_102417863300001947MarineALATKRYHEQLQREYNYRQAIRDGLIERVESTSWNISDND*
GOScombined01_10656123863300002040MarineMSNTYTMTKEQLIALATKRYHEQLQREYNYRQAIRDGLIERVESTSWNISDND*
Ga0070725_1053627323300005920Marine SedimentYTMTKEQLIASAKKRYHEQLQREYNYRQAIRDGLIHPFDVQTIEYWSISDKH*
Ga0075478_1011817223300006026AqueousMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERVESTSWNISDNH*
Ga0098048_1003809123300006752MarineMNKEQLIALATRKYQEQLQREYYYRQAIRDGLVERCESTDWNISDND*
Ga0098048_116087523300006752MarineMSNTMTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESTDCNISDNH*
Ga0098055_108014213300006793MarineMDKQAYLIASTKRKFYEQLQREHNYRQAIRDGLIERCPSSTFTISDND*L
Ga0098055_110247233300006793MarineMDKQAYLIATTKRKFYEQLQREHNYRQAIRDGLIERCPSSTF
Ga0098055_114878823300006793MarineMTKEQLIALATKKYHEQLQREYHYRQAIRDGLIERVESTEWNISDND*
Ga0098055_119455623300006793MarineMSNTYTMTKEQLIALATKRYHEQLQREYHYRQAIRDGLVQPFDAKTIEYWNIADND*
Ga0098055_126704433300006793MarineCHTKDMDKQAYLIATTKRKFYEQLQREHNYRQAIRDGLIERCPSSTFTISDND*
Ga0098055_138329213300006793MarineMNKEQLIASATRKYHEQLQREYHYRQAIRDGLIERVDSAEWHISDNH*
Ga0070754_1045660323300006810AqueousMNKEQLIALATKKYHEQLQREYHYRQAIRDGLIERVESTSWNISDNH*
Ga0070750_1039751113300006916AqueousNSMNKEQLIASATKRYHDQLKREYNYRQAIRDGLIQPFDAKTIEYWNISDNH*
Ga0070748_120197033300006920AqueousMTKEQLIALATRKYHEQLQREYNYRQAIRDGLIERCESTNWNIADKD*
Ga0098060_102051933300006921MarineMSNTYTMTKEQLIALATKRYHEQLQREYHYRQAIRDGLIHPFDVETIEYWDIADKD*
Ga0098051_118997213300006924MarineMSNTYTMTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESTDCNISDNH*
Ga0098051_121185923300006924MarineMMNKEQLIALATKRYHEQLQREYHYRQAIRDGLIERVESTDWNISDND*
Ga0098050_112794823300006925MarineMTKEQLIALATKRYHEQLQREYHYRQAIRDGLVQPFDAKTIEYWNIADND*
Ga0098050_115173913300006925MarineMMNKEQLIASATRKYHEQLQREYNYRQAIRDGLIERVESTDWNISDNH*
Ga0098050_117065313300006925MarineMMNKEQLIALATRKYHEQLQREYHYRQAIRDGLIERVESTEWHISDND*
Ga0098050_117823313300006925MarineCSNLCHTNSMNKEQLIALATKRYHEQLQREYNYRQAIRDGLIERVDSVDWNISDND*
Ga0102853_102525213300007543EstuarineMNKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESSTFTISDN
Ga0105744_105762513300007863Estuary WaterPTNPCHTNSMNKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESSTFTISDNH*
Ga0105741_101294413300007956Estuary WaterMNKEQLIALATKKYHEQLQREYNYRQAIRDGLIERVDSAEWHISDND*
Ga0105746_123874213300007973Estuary WaterMNKEQLIGLATKKFHEQLQREYNYRQAIRDGLIERVDSAEWHISDND*
Ga0115566_1022028533300009071Pelagic MarineMNKEQLIALATRKYHEQLQREYYYRQAIRDGLIERVESTNWNISDNH*
Ga0102814_1005388813300009079EstuarineMNKEQLIALATKKYHEQLQREYNYRQAIRDGSIQPFDAKTIEYWNIADND*
Ga0098049_114595023300010149MarineMNKEQLIALATKRYHEQLQREYNYRQAIRDGLIERVDSVDWNISDND*
Ga0098056_107812723300010150MarineMDKQAYLIASTKRKFYEQLQREHNYRQAIRDGLIERCESSSFTISDNH*
Ga0181369_111769513300017708MarineMSNTMNKEQLIALATKKYHEQLQREYYYRQAIRDGLIERCESTDWNISDNH
Ga0181387_105955723300017709SeawaterMNKEQLIASATKRYHEQLQREYNYRQSIRDGLVQPFDAKTIEYWNISDNH
Ga0181391_104246133300017713SeawaterMSNTYTMTKEQLIALATKRYHEQLQREYHYRQSIRDGLVQPFDAKTIEYW
Ga0181412_115581113300017714SeawaterMTKEQLLALATKKYHEQLQREYNYRQAIRDGLIERCESTDWNISDND
Ga0181390_104744933300017719SeawaterMSNRYTMTKEQLIALATKRYHEQLQREYHYRQSIRDGLVQPFDAKTIEYWNISDNH
Ga0181383_115467213300017720SeawaterKEQLIALATKRYHEQLQREYHYRQSIRDGLVQPFNAKTIEYWNISDNH
Ga0181398_102083853300017725SeawaterMSNTYTMTKEQLIALATRKYHEQLQREYNYRQAIRDGLIERCESTNWNISDND
Ga0181419_101017243300017728SeawaterMSNKYTMNKEQLIASVTKKYHEQLQREYNYRQAIRDGLIQPFDAKTIEYWNIADND
Ga0187218_102965523300017737SeawaterMSNTYTMTKEQLIALATKRYHEQLQREYHYRQSIRDGLVQPFDAKTIEYWNISDNH
Ga0181428_100076663300017738SeawaterMSNTYTMTKEQLIALAKKKYHEQLQREYNYRQAIRDGLIHPFDVETIEYWNISDND
Ga0181392_101721733300017749SeawaterMSNTYTMTKEQLIALATKRYHEQLQREYHYRQSIRDGLVQPFDAKTIEYLNISDNH
Ga0181392_116450423300017749SeawaterMTKEQLIALATRKYHEQLQREYTYRQAIRDGLIERCESTEWDISDND
Ga0187220_114454523300017768SeawaterMGNTMNKEQIIALATKKYHEQLQREYNYRQAIRDGLIERCESTDWNISDNH
Ga0187217_120744023300017770SeawaterMTKEQLIALATRKYHEQLQREYTYRQAIRDGLIERCESTEWDISDDD
Ga0187217_131441213300017770SeawaterMSNTMTKEQLIALATRKYHEQLQREYYYRQAIRDGLIERVDSAEWHISDND
Ga0181430_117071723300017772SeawaterKEQLIALAKKKYHEQLQREYNYRQAIRDGLIHPFDVETIEYWNISDND
Ga0181394_103421113300017776SeawaterKEQLIALATRKYHEQLQREYYYRQAIRDGLIERCESTDWNISNNH
Ga0181394_106977523300017776SeawaterMGNTMNKEQIIALATKKYHEQLQREYYYRQAIRDGLIERCESTDWNISDNH
Ga0181380_110615733300017782SeawaterMTKEQLIALATKRYHEQLQREYHYRQSIRDGLVQPFDAKTIEYWNISDNH
Ga0181380_124386023300017782SeawaterMTKEQLLALATKKYHEQLQREYNYRQAIRDGLIERCESTDWNISDNH
Ga0181379_112024613300017783SeawaterMSNTYTMTKEQLLALATKKYHEQLQREYHYRQAIRDGLIERVESTNWN
Ga0181379_115492133300017783SeawaterMSNTYTMTKEQLIASVTKRYHEQLQREYNYRQAIRDGSIQPFDAKTIEYWNIADND
Ga0194023_102092223300019756FreshwaterMNKEQLIASATKRYHEQLQREYNYRQAIRDGLVQPFDAKTIEYWDIADND
Ga0211505_114844513300020352MarineQLIALATRKYHEQLQREYYYRQAIRDGLIERVESTSWNISDNH
Ga0211521_1028589723300020428MarineMNKEQLIASATKRYHEQLQREYNYRQAIRDGSIQRFDDKTIEYWNISDNH
Ga0213863_10005397173300021371SeawaterMSNTMNKEQLIALATKKYHEQLQREYHYRQAIRDGLIERVESNNWNISDND
Ga0213863_1008876433300021371SeawaterMTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESTDWNISDNH
Ga0222718_1002006613300021958Estuarine WaterNTYTMTKEQLIALATKRYHEQLQREYNYRQAIRDGLIERVESTNWNISDNH
Ga0222718_1005478733300021958Estuarine WaterMSNTYTMTKEQLIASATRKYHEQLQREYYYRQAIRDGLIERCESTEWHISDND
Ga0222718_1011856043300021958Estuarine WaterMMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERVESTNWNISDND
Ga0222718_1011965133300021958Estuarine WaterMTKEQLIALATKRYHEQLQREYYYRQAIRDGLIERVESTDWNISDND
Ga0222718_1028526113300021958Estuarine WaterMNKEQLIALTTKRYHEQLQREYNYRQSIRDGLIERVESTNWNISDNH
Ga0222716_1070042523300021959Estuarine WaterMMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERVESTSWNISDNH
Ga0222715_1070313523300021960Estuarine WaterMNKEQLIASATRKYHEQLQREYYYRQAIRDGLIERVESTDWNISDNH
Ga0222719_1078977023300021964Estuarine WaterYTMTKEQLIALATKRYHEQLQREYNYRQAIRDGLIERVESTNWNISDNH
Ga0222719_1079712513300021964Estuarine WaterYTMTKEQLITLATRKYHEQLQREYHYRQAIRDGLIERVESTDWNISDND
Ga0212024_108087323300022065AqueousMNKEQLIALATKKYHEQLQREYHYRQAIRDGLIERVESTSWNISDNH
Ga0212026_107690013300022069AqueousMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERVESTSWNISDNH
(restricted) Ga0233412_1051714123300023210SeawaterYTMTKEQLIDLATKKYHEQLQREYNYRQAIRDGSIERCESTEWSIADNH
(restricted) Ga0255039_1007132543300024062SeawaterMSNTYAINKEQLIASATKKYHEQLQREYYYRQAIRDGLIERCESTDLNISDNH
(restricted) Ga0255039_1019299423300024062SeawaterMSNTHTMTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESTEWSIADND
(restricted) Ga0255039_1036110623300024062SeawaterYTMTKEQLIALATKKYHEQLQREYHYRQAIRDGSIQPFDAKTIEYWDIADND
(restricted) Ga0233438_1012329213300024255SeawaterMSNTYAINKEQLIALATKKYQEQLQREYYYRQAIRDGLIERCESTDLNISDNH
(restricted) Ga0255046_1030122423300024519SeawaterMNKEQLIASVTKRYHEQLQREYNYRQAIRDGSIQPFDAKTIEYWNIADND
Ga0208667_1000229233300025070MarineMNKEQLIALATRKYQEQLQREYYYRQAIRDGLVERCESTDWNISDND
Ga0208667_100211023300025070MarineMNKEQLIALATKRYHEQLQREYNYRQAIRDGLIERVDSVDWNISDND
Ga0208298_101807843300025084MarineMTKEQLIALATKKYHEQLQREYHYRQAIRDGLIERVESTEWNISDND
Ga0208298_103350913300025084MarineMSNTYTMTKEQLIALATKRYHEQLQREYHYRQAIRDGLVQPFDAKTIEYWNIADND
Ga0208792_103094623300025085MarineMTKEQLIALATKKYHEQLQREYNYRQAIRDGLIERCESTDCNISDNH
Ga0208792_106182613300025085MarineMNKEQLIALATKKYHEQLQREYNYRQAIRDGLIERVDSAEWYISDND
Ga0208792_106675823300025085MarineMTKEQLIALATKRYHEQLQREYHYRQAIRDGLVQPFDAKTIEYWNIADND
Ga0208669_100605423300025099MarineMSNTYTMTKEQLIALATKRYHEQLQREYHYRQAIRDGLIHPFDVETIEYWDIADKD
Ga0208793_109702913300025108MarineMDKQAYLIASTKRKFYEQLQREHNYRQAIRDGLIERCPSSTFTISDND
Ga0209337_125815743300025168MarineYTMTKEQLIASATKRYHEQLQREYNYRQAIRDGSIQPFDAKTIEYWDIADND
Ga0208899_122294823300025759AqueousEQLIALATRKYHEQLQREYNYRQAIRDGLIERVESTSWNISDNH
Ga0208917_117050113300025840AqueousMNKEQLIASATKRYHEQLQREYNYRQAIRDGLIQPFDAKTIEYWNISDNH
Ga0209631_1018893943300025890Pelagic MarineFPANPCHTNSMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERVESTSWNISDNH
Ga0209631_1035731413300025890Pelagic MarineFPANPCHTNSMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERCESSKFTISDNH
Ga0209271_1039052013300027845Marine SedimentYTMTKEQLIASAKKRYHEQLQREYNYRQAIRDGLIHPFDVQTIEYWSISDKH
Ga0256368_107900323300028125Sea-Ice BrineMSNTYTMTKEQLIASATKRYHEQLQREYNYRQAIRDGSIQPFDAKTIEYWDIADND
Ga0183755_101549423300029448MarineMSNTYTMTKEQLIALATKRYHEQLQREYNYRQAIRDGSIQRFDDKTIEYWNISDND
Ga0183755_104535813300029448MarineMTKEQLIALATKRYHEQLQREYNYRQAIRDGLIHPFDVETIEYWNISDSD
Ga0183755_107740833300029448MarineMTKEQLIALATKRYHEQMQREWHYRQAIRDGLIHPFDVETIEYWNISDND
Ga0307488_1026824913300031519Sackhole BrineYTMTKKQLIALATKKYHEQLQREYHYRQSIRDGSIQPFDAKTIEYWNISDNH
Ga0307489_1019200453300031569Sackhole BrineYTMTKKQLIALATKKYHEQLQREYHYRQSIRDGSIQPFDPKTIEYWNISDNH
Ga0307489_1086669233300031569Sackhole BrineMSNTYTMTKKQLIALATKKYHEQLQREYHYRQSIRDGSIQPFDAKT
Ga0315315_1007432133300032073SeawaterMNKEQLIALATRKYHEQLQREYNYRQAIRDGLIERVESTNWNISDNH
Ga0316202_1049002113300032277Microbial MatMSNTYTMTKEQLIASATKRYHEQLQREYNYRQAIRDGLIQPFDAKTIEYWNISDND
Ga0314858_090592_142_2943300033742Sea-Ice BrineMTKEQLIALATKRYHEQLQREYNYRQAIRDGLVQPFDAKTIEYWDIADNH
Ga0314858_156214_39_1913300033742Sea-Ice BrineMTKEQLIALATKKYHEQLQREYHYRQSIRDGSIQPFDPKTIEYWDIADND
Ga0314858_176036_2_1453300033742Sea-Ice BrineMNKETLIALATKRYHEQLQREYNYRQAIRDGLIERVESTNWNISDKN


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