Metagenome Family F086921

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086921
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	82 residues
Representative Sequence	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSRGANS
Number of Associated Samples	78
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	7.27 %
% of genes near scaffold ends (potentially truncated)	16.36 %
% of genes from short scaffolds (< 2000 bps)	74.55 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (81.818 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.455 % of family members)
Environment Ontology (ENVO)	Unclassified (52.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.66% β-sheet: 0.00% Coil/Unstructured: 42.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03061	4HBT	9.09
PF00903	Glyoxalase	8.18
PF00583	Acetyltransf_1	3.64
PF05016	ParE_toxin	2.73
PF01425	Amidase	2.73
PF01828	Peptidase_A4	1.82
PF10049	DUF2283	1.82
PF12681	Glyoxalase_2	1.82
PF00561	Abhydrolase_1	0.91
PF01637	ATPase_2	0.91
PF01022	HTH_5	0.91
PF13361	UvrD_C	0.91
PF01850	PIN	0.91
PF00801	PKD	0.91
PF00211	Guanylate_cyc	0.91
PF00077	RVP	0.91
PF13602	ADH_zinc_N_2	0.91
PF14622	Ribonucleas_3_3	0.91
PF00092	VWA	0.91
PF13470	PIN_3	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	2.73
COG1373	Predicted ATPase, AAA+ superfamily	General function prediction only [R]	0.91
COG1672	Predicted ATPase, archaeal AAA+ ATPase superfamily	General function prediction only [R]	0.91
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.91
COG3577	Predicted aspartyl protease	General function prediction only [R]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.45 %
Unclassified	root	N/A	14.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.45 %
Unclassified	root	N/A	14.55 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	81.82 %
Unclassified	root	N/A	14.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.55 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	7.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.55 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	7.27 %
archaeon 13_1_40CM_2_52_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_2_52_4	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.55 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	7.27 %
archaeon 13_1_40CM_2_52_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_2_52_4	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.55 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7.27 %
archaeon 13_1_40CM_2_52_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_2_52_4	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10076603	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300002558\|JGI25385J37094_10174195	Not Available	576	Open in IMG/M
3300002560\|JGI25383J37093_10156532	All Organisms → cellular organisms → Archaea	602	Open in IMG/M
3300002561\|JGI25384J37096_10166516	Not Available	680	Open in IMG/M
3300002908\|JGI25382J43887_10031267	All Organisms → cellular organisms → Archaea	2876	Open in IMG/M
3300002908\|JGI25382J43887_10165576	Not Available	1104	Open in IMG/M
3300002909\|JGI25388J43891_1013010	Not Available	1532	Open in IMG/M
3300005166\|Ga0066674_10194169	All Organisms → cellular organisms → Archaea	965	Open in IMG/M
3300005166\|Ga0066674_10207401	All Organisms → cellular organisms → Archaea	932	Open in IMG/M
3300005167\|Ga0066672_10050286	All Organisms → cellular organisms → Archaea	2385	Open in IMG/M
3300005167\|Ga0066672_10074417	All Organisms → cellular organisms → Archaea	2016	Open in IMG/M
3300005167\|Ga0066672_10982793	All Organisms → cellular organisms → Archaea	517	Open in IMG/M
3300005171\|Ga0066677_10111757	All Organisms → cellular organisms → Archaea	1459	Open in IMG/M
3300005174\|Ga0066680_10382450	All Organisms → cellular organisms → Archaea	895	Open in IMG/M
3300005174\|Ga0066680_10683248	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300005176\|Ga0066679_10983085	All Organisms → cellular organisms → Archaea	526	Open in IMG/M
3300005178\|Ga0066688_10352809	All Organisms → cellular organisms → Archaea	952	Open in IMG/M
3300005180\|Ga0066685_10911774	All Organisms → cellular organisms → Archaea	586	Open in IMG/M
3300005181\|Ga0066678_10239530	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1170	Open in IMG/M
3300005445\|Ga0070708_100084257	All Organisms → cellular organisms → Archaea	2883	Open in IMG/M
3300005447\|Ga0066689_10895768	All Organisms → cellular organisms → Archaea	548	Open in IMG/M
3300005468\|Ga0070707_100021144	All Organisms → cellular organisms → Archaea	6148	Open in IMG/M
3300005552\|Ga0066701_10870675	All Organisms → cellular organisms → Archaea	534	Open in IMG/M
3300005555\|Ga0066692_10032418	All Organisms → cellular organisms → Archaea	2779	Open in IMG/M
3300005556\|Ga0066707_10889235	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300005559\|Ga0066700_10548274	All Organisms → cellular organisms → Archaea	806	Open in IMG/M
3300005561\|Ga0066699_10869521	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300005568\|Ga0066703_10406297	All Organisms → cellular organisms → Archaea	817	Open in IMG/M
3300005586\|Ga0066691_10155780	All Organisms → cellular organisms → Archaea	1316	Open in IMG/M
3300006794\|Ga0066658_10599893	All Organisms → cellular organisms → Archaea	600	Open in IMG/M
3300006797\|Ga0066659_10321252	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1189	Open in IMG/M
3300007258\|Ga0099793_10479250	All Organisms → cellular organisms → Archaea	617	Open in IMG/M
3300007265\|Ga0099794_10025779	All Organisms → cellular organisms → Archaea	2712	Open in IMG/M
3300007265\|Ga0099794_10108954	Not Available	1386	Open in IMG/M
3300007265\|Ga0099794_10195296	Not Available	1036	Open in IMG/M
3300009012\|Ga0066710_101075303	All Organisms → cellular organisms → Archaea	1243	Open in IMG/M
3300009089\|Ga0099828_11463497	All Organisms → cellular organisms → Archaea	603	Open in IMG/M
3300009137\|Ga0066709_102400172	All Organisms → cellular organisms → Archaea	717	Open in IMG/M
3300010304\|Ga0134088_10234854	All Organisms → cellular organisms → Archaea	881	Open in IMG/M
3300011269\|Ga0137392_11152984	Not Available	633	Open in IMG/M
3300012189\|Ga0137388_10671943	All Organisms → cellular organisms → Archaea	962	Open in IMG/M
3300012199\|Ga0137383_10127835	All Organisms → cellular organisms → Archaea	1855	Open in IMG/M
3300012199\|Ga0137383_10307796	All Organisms → cellular organisms → Archaea	1160	Open in IMG/M
3300012199\|Ga0137383_10379345	All Organisms → cellular organisms → Archaea	1036	Open in IMG/M
3300012203\|Ga0137399_10229507	All Organisms → cellular organisms → Archaea	1517	Open in IMG/M
3300012205\|Ga0137362_10230839	Not Available	1597	Open in IMG/M
3300012206\|Ga0137380_10126069	All Organisms → cellular organisms → Archaea	2338	Open in IMG/M
3300012207\|Ga0137381_10340635	All Organisms → cellular organisms → Archaea	1307	Open in IMG/M
3300012207\|Ga0137381_10670337	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	902	Open in IMG/M
3300012209\|Ga0137379_10460235	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1180	Open in IMG/M
3300012209\|Ga0137379_10559793	All Organisms → cellular organisms → Archaea	1051	Open in IMG/M
3300012210\|Ga0137378_11344235	All Organisms → cellular organisms → Archaea	629	Open in IMG/M
3300012210\|Ga0137378_11738590	All Organisms → cellular organisms → Archaea	529	Open in IMG/M
3300012285\|Ga0137370_10704477	All Organisms → cellular organisms → Archaea	627	Open in IMG/M
3300012349\|Ga0137387_10297755	All Organisms → cellular organisms → Archaea	1166	Open in IMG/M
3300012349\|Ga0137387_11192781	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300012351\|Ga0137386_10046610	All Organisms → cellular organisms → Archaea	2984	Open in IMG/M
3300012351\|Ga0137386_10271655	All Organisms → cellular organisms → Archaea	1220	Open in IMG/M
3300012356\|Ga0137371_11233906	All Organisms → cellular organisms → Archaea	556	Open in IMG/M
3300012357\|Ga0137384_10484715	All Organisms → cellular organisms → Archaea	1016	Open in IMG/M
3300012362\|Ga0137361_10037619	All Organisms → cellular organisms → Archaea	3900	Open in IMG/M
3300012363\|Ga0137390_10311788	Not Available	1555	Open in IMG/M
3300012927\|Ga0137416_10226302	All Organisms → cellular organisms → Archaea	1515	Open in IMG/M
3300012977\|Ga0134087_10014109	All Organisms → cellular organisms → Archaea	2815	Open in IMG/M
3300017657\|Ga0134074_1378539	All Organisms → cellular organisms → Archaea	525	Open in IMG/M
3300017659\|Ga0134083_10109060	All Organisms → cellular organisms → Archaea	1097	Open in IMG/M
3300018433\|Ga0066667_10278904	All Organisms → cellular organisms → Archaea	1285	Open in IMG/M
3300018468\|Ga0066662_10023277	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3525	Open in IMG/M
3300018468\|Ga0066662_10654457	All Organisms → cellular organisms → Archaea	994	Open in IMG/M
3300018468\|Ga0066662_11502746	All Organisms → cellular organisms → Archaea	701	Open in IMG/M
3300018468\|Ga0066662_12557918	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300021046\|Ga0215015_10293336	All Organisms → cellular organisms → Bacteria	4529	Open in IMG/M
3300021046\|Ga0215015_10627791	All Organisms → cellular organisms → Archaea	850	Open in IMG/M
3300024330\|Ga0137417_1184664	Not Available	1433	Open in IMG/M
3300024330\|Ga0137417_1269604	All Organisms → cellular organisms → Archaea	1132	Open in IMG/M
3300025922\|Ga0207646_10005089	All Organisms → cellular organisms → Archaea	13953	Open in IMG/M
3300025922\|Ga0207646_10283490	All Organisms → cellular organisms → Archaea	1497	Open in IMG/M
3300026277\|Ga0209350_1004552	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_2_52_4	4920	Open in IMG/M
3300026295\|Ga0209234_1006944	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4296	Open in IMG/M
3300026296\|Ga0209235_1094439	All Organisms → cellular organisms → Archaea	1302	Open in IMG/M
3300026297\|Ga0209237_1039109	All Organisms → cellular organisms → Archaea	2502	Open in IMG/M
3300026297\|Ga0209237_1237254	All Organisms → cellular organisms → Archaea	562	Open in IMG/M
3300026298\|Ga0209236_1030557	All Organisms → cellular organisms → Archaea	2882	Open in IMG/M
3300026298\|Ga0209236_1041126	All Organisms → cellular organisms → Archaea	2380	Open in IMG/M
3300026309\|Ga0209055_1001048	All Organisms → cellular organisms → Archaea	18557	Open in IMG/M
3300026309\|Ga0209055_1206944	All Organisms → cellular organisms → Archaea	600	Open in IMG/M
3300026313\|Ga0209761_1055623	All Organisms → cellular organisms → Archaea	2184	Open in IMG/M
3300026313\|Ga0209761_1090030	Not Available	1562	Open in IMG/M
3300026313\|Ga0209761_1214788	Not Available	818	Open in IMG/M
3300026317\|Ga0209154_1019181	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3222	Open in IMG/M
3300026317\|Ga0209154_1155547	All Organisms → cellular organisms → Archaea	944	Open in IMG/M
3300026327\|Ga0209266_1040499	All Organisms → cellular organisms → Archaea	2378	Open in IMG/M
3300026328\|Ga0209802_1213766	All Organisms → cellular organisms → Archaea	724	Open in IMG/M
3300026332\|Ga0209803_1065085	All Organisms → cellular organisms → Archaea	1564	Open in IMG/M
3300026335\|Ga0209804_1010803	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4959	Open in IMG/M
3300026499\|Ga0257181_1026935	Not Available	884	Open in IMG/M
3300026551\|Ga0209648_10406021	Not Available	888	Open in IMG/M
3300027643\|Ga0209076_1010361	All Organisms → cellular organisms → Archaea	2375	Open in IMG/M
3300027643\|Ga0209076_1182355	All Organisms → cellular organisms → Archaea	580	Open in IMG/M
3300027671\|Ga0209588_1106028	Not Available	903	Open in IMG/M
3300027671\|Ga0209588_1174946	Not Available	675	Open in IMG/M
3300027671\|Ga0209588_1220533	All Organisms → cellular organisms → Archaea	586	Open in IMG/M
3300027846\|Ga0209180_10449920	All Organisms → cellular organisms → Archaea	726	Open in IMG/M
3300027875\|Ga0209283_10040990	All Organisms → cellular organisms → Archaea	2919	Open in IMG/M
3300027875\|Ga0209283_10840612	All Organisms → cellular organisms → Archaea	561	Open in IMG/M
3300031753\|Ga0307477_10713413	All Organisms → cellular organisms → Archaea	670	Open in IMG/M
3300031962\|Ga0307479_10002022	All Organisms → cellular organisms → Archaea	18479	Open in IMG/M
3300031962\|Ga0307479_10027905	All Organisms → cellular organisms → Bacteria	5367	Open in IMG/M
3300032180\|Ga0307471_101073795	All Organisms → cellular organisms → Archaea	971	Open in IMG/M
3300032205\|Ga0307472_100816554	All Organisms → cellular organisms → Archaea	854	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.45%
Loam	Environmental → Terrestrial → Soil → Loam	4.55%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	49.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	22.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100766032	3300002558	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGXNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGENS*
JGI25385J37094_101741952	3300002558	Grasslands Soil	RLGLAGIAACVLGLVMSVGALTGFYPYQPGSNFNGGASILFLALFFTGELIGLFGLGVLIYLGIYRRQRGRSSED*
JGI25383J37093_101565322	3300002560	Grasslands Soil	MFFMSGSSRLGLAGIAACVLGLVMSVGALTGFYPYQPGSNFNGGASILFLALFFTGELIGLFGLGVLIYLGIYRRQRGRSSED*
JGI25384J37096_101665161	3300002561	Grasslands Soil	RSRLGLAGIGACFLGSVMSVGAFAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGLYRRQRRRSCED*
JGI25382J43887_100312674	3300002908	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMTIGAAVIYPHLTGSNVNVDADILFAVVFFTGEFIGLLGLGALILLGIYRRQRGRSGKN*
JGI25382J43887_101655761	3300002908	Grasslands Soil	MFFMSGRSRLGFAGIGACVLGLVMTVGAAVIYPHPTGSNINVDADILSAVVFFTGEFIGLLGLGVLILLGIYRRQRGRIGKN*
JGI25388J43891_10130102	3300002909	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMTVAAPGIYPHPTRSNISVDGDVVFAPVSFMGEFIGLLGLGVLILLGIYRRQKGETAKAG*
Ga0066674_101941692	3300005166	Soil	MFFMSGKSRLGLAGIGACVLGLVMSVGALAFYPHPTGSNASGGAVEILFLTLFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0066674_102074011	3300005166	Soil	MFFMSGRSRLGLAGIGACVLGLVMTVGAAGIYPHPTGSNINVDADILFAVVFFTGEFIGLLGLGALILLGIYRRQRGRSGKN*
Ga0066672_100502862	3300005167	Soil	MNRRSRLRLAGIGACALGLVMTVGAAGIYPHPAGSNANADGDILFAVVFFTGEVIGLLGPGILILLGIYRRQRGRSSED*
Ga0066672_100744172	3300005167	Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAGFYPHQAGSNLPNGGAIILFLALFFTGELIGLFGLGILILLGLYRRQRRRSSED*
Ga0066672_109827931	3300005167	Soil	MNRRSRLGLAGIGACVLGLVMSIGALAGFYPHQTGSNFPNGGAIILFLALFFTGELIGLFGLGILIYLGVYRRQLGRSSED*
Ga0066677_101117571	3300005171	Soil	MFFMSGRSRLGLAGVGACVLGLVMSVGAFAGFYPYQAGSNFNGVAIILFLALFFTGELIGLFGLGILIYLGVYRRQHGRSSED*
Ga0066680_103824501	3300005174	Soil	MFFMSGRSKLGLAGIGACVLGLIMSVGALAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGVYRRQRGRSSKD*
Ga0066680_106832481	3300005174	Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGPNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQR
Ga0066679_109830851	3300005176	Soil	MFFMSGRSKLGLAGIGACVLGLIMSVGALAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGVYRRQRGRSSED*
Ga0066688_103528091	3300005178	Soil	MSGRSRLGLAGVGACVLGLVMSVGAFAGFYPYQAGSNFNGVAIILFLALFFTGELIGLFGLGILIYLGVYRRQ
Ga0066685_109117742	3300005180	Soil	MFFMSGKSRLGLAGIGACVLGLVMSVGALAFYPHPTGSNASGGAVEILFLTLFFFGELIGLFGLGVLIYLGIYKRQ
Ga0066678_102395302	3300005181	Soil	MFFISDGSRLGLAGVGACVLGLVMSVGALAFYPHPTGSNVGGGAVEILFLALFFLGEFIGLFGLGVLIYIGVYRRQRGRSSED*
Ga0070708_1000842572	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ATITSSLNLFMRRTSRLGLAGIGACVLGLGMTVGAAGLYPHPTGSNINADVDILFAVVFFTGELISLLGLGVLIYLVVYRRQRGKS*
Ga0066689_108957681	3300005447	Soil	MFSMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLSLFFFGELIGLFGLGVLIYLGIYKRQRSRGANS*
Ga0070707_1000211443	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFFMSGRSRLGLAGIGACVLGLVMSVGALAGFYPYQAGSNFNGGAIILFLALFFTGELIGLFGLGILIYLGVYRRQPGRSSED*
Ga0066701_108706752	3300005552	Soil	MFFMSGRSKLGLAGIGACVLGLVMSVGSLAFYPHPAGPNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0066692_100324181	3300005555	Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSRGANS*
Ga0066707_108892352	3300005556	Soil	MLFISDGSRLGLAGVGACVLGLVMSVGALAFYPHPTGSNVGGGAVEILFLALFFLGEFIGLFGLGVLIYIGVYRRQRVRSSED*
Ga0066700_105482741	3300005559	Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0066699_108695212	3300005561	Soil	MFFISDGSRLGLAGVGACVLGLVISVGALAFYPHPTGSNVGGGAVEIFFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0066703_104062972	3300005568	Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLSLFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0066691_101557803	3300005586	Soil	MFSMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLSLFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0066658_105998932	3300006794	Soil	MVSMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLSLFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0066659_103212522	3300006797	Soil	MLFISDGSRLGLAGVGACVLGLVMSVGALAFYPHPTGSNVGGGAVEILFLALFFLGEFIGLFGLGVLIYIGVYRRQRGRSSED*
Ga0099793_104792501	3300007258	Vadose Zone Soil	MFFLSGRSRLGLAGIGACFLGSVMSVGAFAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGLYRRQRRRSCED*
Ga0099794_100257791	3300007265	Vadose Zone Soil	LLQALKVFMNRGSRLGLAGIGACVLGLVVSIGALAFYPHPTGSNVSGGPAEMLFLALFFIGELIGLLGLGVLIYLGVYRRQRGRSSED*
Ga0099794_101089543	3300007265	Vadose Zone Soil	MFFASRRSRLVLAGIGACLLGLVTSVGALGIYPHPAGSNVSGGPAVILFLALFFLGELIGLFGLGVLIYLGVYGRQRGRSSED*
Ga0099794_101952962	3300007265	Vadose Zone Soil	MFFLSRGSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVGGGPVEILVLALFFMGELIGLFGLGVLIYLGIYRRQRGRSSEN*
Ga0066710_1010753031	3300009012	Grasslands Soil	MLFISDGSRLGLAGVGACVLGLVMSVGALAFYPHPTGSNVGGGAVEILFLALFFLGEFIGLFGLGVLIYIGVYRRQRGRSSED
Ga0099828_114634972	3300009089	Vadose Zone Soil	LLQALKVFMNRGSRLGLAGIGACVLGLVVSIGALAFYPHPTGSNVSGGPVEILFLALFFIGELIGLLGLGVLIYLGIYRRQRGRSSED*
Ga0066709_1024001721	3300009137	Grasslands Soil	MFFISDGSRLGLAGVGACVLGLVMSVGALAFYPHPTGSNVGGGAVEILFLALFFLGEFIGLFGLGVLIYIGVYRRQRGRSSEE*
Ga0134088_102348542	3300010304	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMTVGAAVIYPHPTGSNINVDADILFAVVFFTGEFIGLLGLGVLILLGIYRRQRGRIGKN*
Ga0137392_111529841	3300011269	Vadose Zone Soil	RLGLAGVGACALGLVMSVGALAGLYPHQAGSNIPNGGAIILFLALFFTGELIGLFGIGVLIFVWIYRRQRGRTVKN*
Ga0137388_106719431	3300012189	Vadose Zone Soil	MFFASRRSRIVLAGIGACLLGLVTSVGALACYPHPTGSNVGGGPVEILFLAVFFIGELIGLLGLGVLIYLGVYRGQRGRSSED*
Ga0137383_101278354	3300012199	Vadose Zone Soil	MNGTSRLGLVGIGACVLGLVMSVGALAFYPHPAGSNASGGAVEILFLALFFFGELIGLYGLGVLIYLGIYKRQRSGGANS*
Ga0137383_103077961	3300012199	Vadose Zone Soil	MFFMSGRSRLGLAGIGTCVLGLVMTVGAAGIYPHPTGSNINVDADILFAVVFFTGEFIGLLGLGALILLGIYRRQRGRSGKN*
Ga0137383_103793452	3300012199	Vadose Zone Soil	MFFMSGRSRLGLAGIGACVLGLAMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0137399_102295072	3300012203	Vadose Zone Soil	VKFFMNDRSRLGLAGVAACVLGLVMTVGAAGIYPHPTGSNINVDGDVLFAVVFFTGEVIGLLGLGVLILLGIYQRQRGRSGRD*
Ga0137362_102308392	3300012205	Vadose Zone Soil	MFFLNASSRLGLAGIGACVVGLVMTVGAAGNYPHPTGSNINVDGDILFAAVFFTGEIIGLLGLGILILFGIYPRQKERTAKSSLA*
Ga0137380_101260694	3300012206	Vadose Zone Soil	MFFMSGSSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGICKRQRS*
Ga0137381_103406352	3300012207	Vadose Zone Soil	MFFMSGKSRLGLAGIGACVLGLVMSVRALAFYPAPAGSNASGGAVEILFLALSFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0137381_106703372	3300012207	Vadose Zone Soil	AGIGACVLGLVMTVGAAGIYPHPTGSNINVDADILFAVVFFSGEFIGLLGLGALILLGIYRRQRGRSGKN*
Ga0137379_104602351	3300012209	Vadose Zone Soil	MFFMSGSSRLGLAGIAACVLGLVMSVGALTGFYPYQPGSNFNGGASILFLALFFTGELIGLFGLGVLIYL
Ga0137379_105597933	3300012209	Vadose Zone Soil	MFFMSGKSRLGLAGIGACVLGLVMSVGALAFYPAPAGSNASGGAVEILFLALSFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0137378_113442352	3300012210	Vadose Zone Soil	MNGTSRLGLVGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLYGLGVLIYLGIYKRQRSGGANS*
Ga0137378_117385902	3300012210	Vadose Zone Soil	MFFMSGRSRLGLAGIGACVLGLVMTVGAAGIYPHPTGSNINVDADILFAVVFFAGEFIGLLGLGALILLGIYRRQRGRSGK
Ga0137370_107044772	3300012285	Vadose Zone Soil	GACVLGLVMSVGALAFYPHPTGSNASGGAVEILFLTLFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0137387_102977552	3300012349	Vadose Zone Soil	MFFLSGRSRLGLAGIGACFLGVVMSVGALAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGVYRRQRRRSSED*
Ga0137387_111927811	3300012349	Vadose Zone Soil	MFFMSGRSRLGLAGIGTCVLGLVMTVGAAGIYPHPTGSNINVDADILFAVVFFTGEFIGLLGLGVLILLGIYRRQRGRSGKN*
Ga0137386_100466104	3300012351	Vadose Zone Soil	MFFMSGSSRLGLVGIGACVLGLVMSVGALTGFYPYQPGSNFNGGASILFLALFFTGELIGLFGLGVLIYLGIYQRQRGRSSED*
Ga0137386_102716554	3300012351	Vadose Zone Soil	MFFMSGSSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGANS*
Ga0137371_112339061	3300012356	Vadose Zone Soil	MFFMSGRSRLGLAGIGACVLGLVMTVGAAGIYPHPTGSNINVDADILFAVVFFSGEFIGLLGLGVLILLGIYRRQKGETAKAG*
Ga0137384_104847152	3300012357	Vadose Zone Soil	MFFMSGRSRLGFAGIGACVLGLVMTVGAAGIYPHPTGSNINVDADILFAVVFFSGEFIGLLGLGALILLGIYWRQRGRSGKN*
Ga0137361_100376197	3300012362	Vadose Zone Soil	AGIGACVLGLVMTVGAAVIYPHPTGSNINADADILFAVVFFTGEFIGLLGLGVLILVGIYRRQRGRSAKN*
Ga0137390_103117881	3300012363	Vadose Zone Soil	IVSRPRLLQAWKVFMNRGSRLGLAGIGACVLGLVVSIGALAFYPHPTGSNVSGGPAEMLFLALFFIGELIGLLGLGVLIYLGVYRRQRGRSSED*
Ga0137416_102263022	3300012927	Vadose Zone Soil	MFFMSGRSRLGLAGIGACFLGSVMSVGAFAGFYPHQTGSNFPNGGSIILFLALFFTGELIGLFGLGILIYLGVYRRQLGRSSEG*
Ga0134087_100141094	3300012977	Grasslands Soil	MFFMSGRSRLGLAGVGACVLGLVMSVGAFAGFYPYQAGSNFNGVAIILFLALFFTGEHIGLFGLGILIYLGAYRRQHGRSSED*
Ga0134074_13785391	3300017657	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMTVAAAGIYPHPSGSNINIDGDILFAAVFFMGEFIGLLGLGVLILLGIYRRQRGETAKAG
Ga0134083_101090602	3300017659	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGAAVIYPHPTGSNINVDADILFAVVFFTGEFIGLLGLGVLILLGIYRRQRGRIGKN
Ga0066667_102789041	3300018433	Grasslands Soil	MFFMSGRSRLGLAGVGACVLGLVMSVGAFAGFYPYQAGSNFNGVAIILFLALFFTGELIGLFGLGILIYLGVYRRQHGRSSED
Ga0066662_100232771	3300018468	Grasslands Soil	MFFMSGSSRLGLAGIAACVLGLVMSVGALTGFYPYQPGSNFNGGASILFLALFFTGELIGLFGLGVLIYLGIYRRQRGRSSED
Ga0066662_106544571	3300018468	Grasslands Soil	MFSMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLSLFFFGELIGLFGLGVLIYL
Ga0066662_115027461	3300018468	Grasslands Soil	MFFKSGRSRLGLAGIGACVLGLVMSVGALAGFYPHHTGSNLPNGGAIILFLALFFTGELIGLFGLGILILLGLYRRQRRRSSED
Ga0066662_125579182	3300018468	Grasslands Soil	MFFMSGRSRLGLAGVGACVPGLVMSVGAFAGFYPYQAGSNFNGVAIILFLALFFTGELIGLFGLGILIYLGVYRRQRGRSSED
Ga0215015_102933363	3300021046	Soil	MNRRSRLGLAGIGACVLGLAIAVGALTGIYPHPVGSNLPSGGAIILFLAVYFTGELIGLLGLGVLIYLMLYHWERGRSSEDS
Ga0215015_106277912	3300021046	Soil	MLFMNRSSRLGLAGIGACVLGLVMTVGAAGLYPHPIGSNINADADILFAVVFFTGELIGLLGLGVLIYLGIYQRQRGKS
Ga0137417_11846642	3300024330	Vadose Zone Soil	MLIMNRTSRFGLAGTGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFIGELIGLFGLGVLIYLAVYKRQSSRNEKD
Ga0137417_12696042	3300024330	Vadose Zone Soil	MNRTSRFGLAGTGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFIGELIGLFGLGVLIYLAVYKRQSSRNEKD
Ga0207646_100050898	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFFMSGRSRLGLAGIGACVLGLVMSVGALAGFYPYQAGSNFNGGAIILFLALFFTGELIGLFGLGILIYLGVYRRQPGRSSED
Ga0207646_102834901	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRRTSRLGLAGIGACVLGLGMTVGAAGLYPHPTGSNINADVDILFAVVFFTGELISLLGLGVLIYLVVYRRQRGKS
Ga0209350_10045523	3300026277	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMTVAAPGIYPHPTRSNISVDGDVVFAPVSFMGEFIGLLGLGVLILLGIYRRQKGETAKAG
Ga0209234_10069446	3300026295	Grasslands Soil	MFFISDGSRLGLAGVGACVLGLVMSVGALAFYPHPTGSNVGGGAVEILFLALFFLGELIGLFGLGVLIYIGVYRRQRGRSSED
Ga0209235_10944393	3300026296	Grasslands Soil	MFFLNASSRLGLAGIGACVVGLVMTVGAAGNYPHPTGSNINVDGDILFAAVFFTGEIIGLLGLGILILFGIYRRQKERTAKSSLA
Ga0209237_10391094	3300026297	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGPNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGANS
Ga0209237_12372541	3300026297	Grasslands Soil	MFSMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLSLFFFGELIGLFGLGVLIYLGIYRRQRSRGANS
Ga0209236_10305574	3300026298	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGANS
Ga0209236_10411262	3300026298	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLALFFFGELIGLFGLGVLIYLGIYKRQRSGGENS
Ga0209055_100104819	3300026309	Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAGFYPHQAGSNLPNGGAIILFLALFFTGELIGLFGLGILILLGLYRRQRRRSSED
Ga0209055_12069441	3300026309	Soil	MFFISDGSRLGLAGVGACVLGLVMSVGALAFYPHPTGSNVGGGAVEILFLALFFLGEFIGLFGLGVLIYIGVYRRQRGRSSED
Ga0209761_10556232	3300026313	Grasslands Soil	MFFMSGRSRLGLAGIGACVLGLVMTIGAAVIYPHLTGSNVNVDADILFAVVFFTGEFIGLLGLGALILLGIYRRQRGRSGKN
Ga0209761_10900302	3300026313	Grasslands Soil	MNASSRLGLAGIGACVVGLVMTVGAAGNYPHPTGSNINVDGDILFAAVFFTGEIIGLLGLGILILFGIYRRQKERTAKSSLA
Ga0209761_12147881	3300026313	Grasslands Soil	SGRSRLGLAGIGACFLGSVMSVGAFAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGLYRRQRRRSCED
Ga0209154_10191813	3300026317	Soil	MFFMSGRSRLGLAGVGACVPGLVMSVGAFAGFYPYQAGSNFNGVAIILFLALFFTGELIGLFGLGILIYLGVYRRQHGRSSED
Ga0209154_11555471	3300026317	Soil	MNRRSRLRLAGIGACALGLVMTVGAAGIYPHPAGSNANADGDILFAVVFFTGEVIGLLGPGILILLGIYRRQRGRSSED
Ga0209266_10404993	3300026327	Soil	MFFMSGKSRLGLAGIGACVLGLVMSVGALAFYPHPTGSNASGGAVEILFLTLFFFGELIGLFGLGVLIYLGIYKRQRSGGANS
Ga0209802_12137661	3300026328	Soil	MFFMSGRSKLGLAGIGACVLGLIMSVGALAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGVYRRQRGRSSKD
Ga0209803_10650854	3300026332	Soil	MFFMSGRSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGAVEILFLSLFFFGELIGLFGLGVLIYLGIYKRQRSRGANS
Ga0209804_10108035	3300026335	Soil	MFFMSGRSRLGLAGIGACVLGLVMLSVGALAGFYPHQAGSNLPNGAIILFLALFFTGELIGLFGLGILILLGLYRRQRRRSSED
Ga0257181_10269351	3300026499	Soil	MFFLSRGSRLGLGGIGACVLGLVMSVGALAFYPHPAGSNVGGGPVEILVLALFFMGELIGLFGLGVLIYLGIYRRQRGRSSEN
Ga0209648_104060212	3300026551	Grasslands Soil	MFFMNRTSRLGLAGIGACVLGLVMSVGALAFYPHPTGSNVGGGPVEILFLAVFFIGELIGLLGLGVLIYLGIYRRQRGRSSED
Ga0209076_10103612	3300027643	Vadose Zone Soil	MNTTSKLGVAGVGACALGLVMSVGALAGLYPHQAGSNFPNGGAIILFLAVFFMGELIGLFGLGVLIFVWVYLRQRGRSVKSQSRTREQTIKGTVD
Ga0209076_11823551	3300027643	Vadose Zone Soil	MFFLSGRSRLGLAGIGACFLGSVMSVGAFAGFYPHQTGSNLPNGGAIILFLALFFTGELIGLFGLGILIYLGLYRRQRRRSCED
Ga0209588_11060281	3300027671	Vadose Zone Soil	MFFLSRGSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVGGGPVEILVLALFFMGELIGLFGLGVLIYLGIYRRQRGRSSEN
Ga0209588_11749461	3300027671	Vadose Zone Soil	RQELVRSRMFFASRRSRLVLAGIGACLLGLVTSVGALAFYPHPTGSNVGGGPVEILFLAVFFIGELIGLLGLGVLIYLGVYRRQRGRSSED
Ga0209588_12205331	3300027671	Vadose Zone Soil	MNRGSRLGLAGIGACVLGLVVSIGALAFYPHPTGSNVSGGPAEMLFLALFFIGELIGLLGLGVLIYLGVYRRQRGRSSED
Ga0209180_104499202	3300027846	Vadose Zone Soil	MFFMNRTSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGVLEIVFLALFFLGELIGLFGLGVLIYLGVYSRQRGRSSED
Ga0209283_100409904	3300027875	Vadose Zone Soil	MFFLSRTSRLGLAGIGACVLGLVMSVGALAFYPHPAGSNVGGGPVEILVLALFFMGELIGLFGLGVLICLGIYRRQRGRSSED
Ga0209283_108406121	3300027875	Vadose Zone Soil	MFFMNRTSRLDLAGIGACVLGLVMSVGALAFYPHPAGSNVSGGVLEIVFLALFFLGELIGLFGLGVLIYLGVYNRQRGRSSED
Ga0307477_107134131	3300031753	Hardwood Forest Soil	MVFMNRTSRLGLAGIGACALGLVMTVGTAGLYPHPTGSNFNIGVDILFAVVFFTGELIGLLGLGVLISLWVYRRQRGES
Ga0307479_100020228	3300031962	Hardwood Forest Soil	MHVMSRTSRLGLAGIGACVLSLVMTLGAAAGLYPHPAGSNINFDADILFAIVFFTGELIGLLGLGVLIYLGVYNRQRDKS
Ga0307479_100279054	3300031962	Hardwood Forest Soil	MSGKSRLGLAGIGACILGLVVTAGAAGFYPRPAGSNPNGYADILFAAVFFTGELIGLLGLGVLIYLRVYRRQMDKS
Ga0307471_1010737953	3300032180	Hardwood Forest Soil	MFFMSGTSRLGLAGVGASILGLVMTVGAVGVYPHPTGSSINVDADILFAAVFFTGEFIGLLGLGVLILLGIYRRQRVRSGKD
Ga0307472_1008165542	3300032205	Hardwood Forest Soil	MSGTSRLGLAGIGACVVGLVMTIGAAGVYPHPTGSNINVDADILFAAVFFTGEFIGLLGLGVLILLGIYRRQRGRSCKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086921

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences