NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F086875

Metagenome / Metatranscriptome Family F086875

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086875
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 45 residues
Representative Sequence LGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG
Number of Associated Samples 80
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.91 %
% of genes near scaffold ends (potentially truncated) 99.09 %
% of genes from short scaffolds (< 2000 bps) 92.73 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (55.455 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(32.727 % of family members)
Environment Ontology (ENVO) Unclassified
(78.182 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(55.455 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.61%    β-sheet: 0.00%    Coil/Unstructured: 76.39%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF01649Ribosomal_S20p 70.91
PF00156Pribosyltran 10.00
PF00480ROK 3.64
PF0563523S_rRNA_IVP 1.82
PF09394Inhibitor_I42 0.91
PF02353CMAS 0.91
PF11925DUF3443 0.91
PF13432TPR_16 0.91
PF04014MazE_antitoxin 0.91
PF01875Memo 0.91
PF13181TPR_8 0.91
PF00732GMC_oxred_N 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0268Ribosomal protein S20Translation, ribosomal structure and biogenesis [J] 70.91
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 7.27
COG1355Predicted class III extradiol dioxygenase, MEMO1 familyGeneral function prediction only [R] 0.91
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.91
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.91
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 0.91
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.45 %
All OrganismsrootAll Organisms44.55 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004152|Ga0062386_100169643All Organisms → cellular organisms → Bacteria1709Open in IMG/M
3300004152|Ga0062386_101379164Not Available587Open in IMG/M
3300005172|Ga0066683_10535349All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300006034|Ga0066656_10032357All Organisms → cellular organisms → Bacteria2916Open in IMG/M
3300006796|Ga0066665_11396276Not Available542Open in IMG/M
3300009518|Ga0116128_1189215Not Available580Open in IMG/M
3300009518|Ga0116128_1228521Not Available519Open in IMG/M
3300009547|Ga0116136_1057271All Organisms → cellular organisms → Bacteria → Acidobacteria1078Open in IMG/M
3300009547|Ga0116136_1093541Not Available786Open in IMG/M
3300009548|Ga0116107_1094936All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300009548|Ga0116107_1202900Not Available520Open in IMG/M
3300009549|Ga0116137_1220783Not Available501Open in IMG/M
3300009617|Ga0116123_1112957Not Available716Open in IMG/M
3300009617|Ga0116123_1176812Not Available545Open in IMG/M
3300009618|Ga0116127_1083580All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300009631|Ga0116115_1174371Not Available544Open in IMG/M
3300009632|Ga0116102_1015086All Organisms → cellular organisms → Bacteria2750Open in IMG/M
3300009637|Ga0116118_1223392Not Available584Open in IMG/M
3300009640|Ga0116126_1275873Not Available521Open in IMG/M
3300009839|Ga0116223_10311596All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300010320|Ga0134109_10502538All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300010325|Ga0134064_10476189All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010339|Ga0074046_10020985All Organisms → cellular organisms → Bacteria4581Open in IMG/M
3300010339|Ga0074046_10025489All Organisms → cellular organisms → Bacteria4082Open in IMG/M
3300010379|Ga0136449_103018927All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300012975|Ga0134110_10214361All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300014151|Ga0181539_1091873All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300014151|Ga0181539_1160468All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300014153|Ga0181527_1196466All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300014155|Ga0181524_10296913Not Available738Open in IMG/M
3300014638|Ga0181536_10049775All Organisms → cellular organisms → Bacteria2772Open in IMG/M
3300014839|Ga0182027_12034251Not Available549Open in IMG/M
3300016750|Ga0181505_10266666All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300017925|Ga0187856_1145187All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300017925|Ga0187856_1147120All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300017925|Ga0187856_1268634All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300017929|Ga0187849_1134155All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300017929|Ga0187849_1350865Not Available545Open in IMG/M
3300017931|Ga0187877_1393265Not Available524Open in IMG/M
3300017931|Ga0187877_1421146Not Available503Open in IMG/M
3300017934|Ga0187803_10113407All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300017934|Ga0187803_10421683All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300017935|Ga0187848_10156613All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300017940|Ga0187853_10207936All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300017946|Ga0187879_10676538All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300017946|Ga0187879_10773817Not Available535Open in IMG/M
3300017948|Ga0187847_10757954Not Available548Open in IMG/M
3300017998|Ga0187870_1251384Not Available605Open in IMG/M
3300017998|Ga0187870_1285847Not Available558Open in IMG/M
3300018001|Ga0187815_10504371Not Available519Open in IMG/M
3300018004|Ga0187865_1270942Not Available564Open in IMG/M
3300018005|Ga0187878_1295576Not Available580Open in IMG/M
3300018009|Ga0187884_10127369Not Available1088Open in IMG/M
3300018013|Ga0187873_1315351Not Available573Open in IMG/M
3300018013|Ga0187873_1396100All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300018014|Ga0187860_1217070All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300018016|Ga0187880_1450917Not Available532Open in IMG/M
3300018017|Ga0187872_10148953All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300018020|Ga0187861_10456893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300018020|Ga0187861_10475410Not Available516Open in IMG/M
3300018020|Ga0187861_10490116Not Available506Open in IMG/M
3300018023|Ga0187889_10436504Not Available563Open in IMG/M
3300018024|Ga0187881_10466844Not Available515Open in IMG/M
3300018037|Ga0187883_10511336Not Available620Open in IMG/M
3300018038|Ga0187855_10088913All Organisms → cellular organisms → Bacteria1874Open in IMG/M
3300018040|Ga0187862_10492796All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300018046|Ga0187851_10641605Not Available599Open in IMG/M
3300018047|Ga0187859_10655566Not Available594Open in IMG/M
3300018057|Ga0187858_10329405All Organisms → cellular organisms → Bacteria → Acidobacteria962Open in IMG/M
3300018062|Ga0187784_11009666Not Available661Open in IMG/M
3300018062|Ga0187784_11222795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300018085|Ga0187772_11039248Not Available599Open in IMG/M
3300018085|Ga0187772_11078613Not Available589Open in IMG/M
3300018086|Ga0187769_10030729All Organisms → cellular organisms → Bacteria → Acidobacteria3644Open in IMG/M
3300018086|Ga0187769_10210114Not Available1442Open in IMG/M
3300018086|Ga0187769_10873191All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300018086|Ga0187769_11125356Not Available594Open in IMG/M
3300018086|Ga0187769_11542207Not Available502Open in IMG/M
3300018088|Ga0187771_11192786Not Available646Open in IMG/M
3300018090|Ga0187770_10488962All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300018090|Ga0187770_11385342Not Available571Open in IMG/M
3300018482|Ga0066669_11010003All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300019230|Ga0181501_1330404All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300019230|Ga0181501_1340313Not Available522Open in IMG/M
3300019275|Ga0187798_1572936Not Available585Open in IMG/M
3300019278|Ga0187800_1247215Not Available516Open in IMG/M
3300019278|Ga0187800_1596538Not Available575Open in IMG/M
3300019284|Ga0187797_1259083Not Available547Open in IMG/M
3300019787|Ga0182031_1450269All Organisms → cellular organisms → Bacteria2190Open in IMG/M
3300025432|Ga0208821_1035769All Organisms → cellular organisms → Bacteria → Acidobacteria973Open in IMG/M
3300025439|Ga0208323_1071864Not Available588Open in IMG/M
3300025439|Ga0208323_1083723Not Available527Open in IMG/M
3300025442|Ga0208034_1028325All Organisms → cellular organisms → Bacteria → Acidobacteria1388Open in IMG/M
3300025472|Ga0208692_1060883All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300025472|Ga0208692_1118449Not Available501Open in IMG/M
3300026547|Ga0209156_10304752All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300027641|Ga0208827_1143085All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2670Open in IMG/M
3300028800|Ga0265338_11068473Not Available545Open in IMG/M
3300030011|Ga0302270_10559717Not Available591Open in IMG/M
3300030659|Ga0316363_10253682Not Available715Open in IMG/M
3300032770|Ga0335085_11869283Not Available613Open in IMG/M
3300032805|Ga0335078_11846704Not Available655Open in IMG/M
3300032892|Ga0335081_12608029Not Available519Open in IMG/M
3300032898|Ga0335072_11475845Not Available582Open in IMG/M
3300033158|Ga0335077_11393192Not Available676Open in IMG/M
3300033402|Ga0326728_10051810All Organisms → cellular organisms → Bacteria5962Open in IMG/M
3300033402|Ga0326728_10694852All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300033402|Ga0326728_11168725Not Available514Open in IMG/M
3300033977|Ga0314861_0508892Not Available515Open in IMG/M
3300033982|Ga0371487_0478586Not Available526Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland32.73%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland18.18%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland10.91%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.55%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.55%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland4.55%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.64%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil3.64%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.73%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.82%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.91%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.91%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.91%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009547Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40EnvironmentalOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300009549Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100EnvironmentalOpen in IMG/M
3300009617Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100EnvironmentalOpen in IMG/M
3300009618Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100EnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014153Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaGEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019230Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019275Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025432Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025442Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025472Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033977Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75EnvironmentalOpen in IMG/M
3300033982Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062386_10016964313300004152Bog Forest SoilRRADLGIKSSWKDSRILLEFLVWQIVVGKESAGEAALGGEVPLPSTEN*
Ga0062386_10137916413300004152Bog Forest SoilRRADLGIKSSWKDSRILLEFLVWQIVVGKESAGEAALGGEVPLPSEG*
Ga0066683_1053534913300005172SoilIKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEPVPVSSAEA*
Ga0066656_1003235713300006034SoilQQAHQADLRIKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEPVPVSSAEA*
Ga0066665_1139627623300006796SoilIKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEQVPVSSAEG*
Ga0116128_118921523300009518PeatlandLRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG*
Ga0116128_122852123300009518PeatlandLRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0116136_105727133300009547PeatlandLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG*
Ga0116136_109354123300009547PeatlandLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG*
Ga0116107_109493613300009548PeatlandTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0116107_120290013300009548PeatlandIKSSWKDSRILLEFLVWQIVVGKESSGEAAVGGEIPLPSTEG*
Ga0116137_122078313300009549PeatlandKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG*
Ga0116123_111295723300009617PeatlandSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0116123_117681213300009617PeatlandSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG*
Ga0116127_108358013300009618PeatlandSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0116115_117437123300009631PeatlandGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0116102_101508663300009632PeatlandAVRRTDLGIKSSWKDSRILLEFLVWQVVVGKESATIPAIGDDLPAPSTEG*
Ga0116118_122339213300009637PeatlandKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0116126_127587323300009640PeatlandDLGIKSSWKDSRILMEFLVWQIVVGKESTGEAALGGEVPVALTES*
Ga0116223_1031159613300009839Peatlands SoilAMRAVRRADLGIKSSWKDSRILLEFLVWQIVVGKESAGEAALGGEVPLPSTES*
Ga0134109_1050253823300010320Grasslands SoilLRNVHQADLRIKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEPVPVSSAEA*
Ga0134064_1047618923300010325Grasslands SoilLRIKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEPVPVSSAEA*
Ga0074046_1002098513300010339Bog Forest SoilLRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAADG*
Ga0074046_1002548993300010339Bog Forest SoilRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0136449_10301892713300010379Peatlands SoilRADLGIKSSWKDSRILLEFLVWQIVVGKESASEAALGGEVPLPSTEG*
Ga0134110_1021436113300012975Grasslands SoilHQADLRIKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEPVPVSSAEA*
Ga0181539_109187333300014151BogWAVRRTDLGIKSSWKDSRILLEFLVWQVVVGKESAGVPTIGEELPAPSAEG*
Ga0181539_116046833300014151BogLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG*
Ga0181527_119646633300014153BogRAVRRADLGIKSSWKDSRILLEFLVWQIVVGKESSGEAALGGEVPLPSTES*
Ga0181524_1029691313300014155BogDSRILLEFLVWQVVVGKESATIPTIGEDLPAPSTEG*
Ga0181536_1004977553300014638BogWKDSRILLEFLVWQVVVGKESATIPTIGEDLPAPSTDG*
Ga0182027_1203425123300014839FenDSKILLEFLVWQIVVGKSPSGEAALGDEVPVPAAD*
Ga0181505_1026666613300016750PeatlandTDLGIKSSWKDSRILLEFLVWQVIVGKESATIPTIGEDLPAPSTEG
Ga0187856_114518713300017925PeatlandTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG
Ga0187856_114712033300017925PeatlandLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187856_126863423300017925PeatlandLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG
Ga0187849_113415533300017929PeatlandLQAMRAVRRADLGIKSSWKDSRILLEFLVWQIVVGKESSGEAAVGGEIPLPSTEG
Ga0187849_135086513300017929PeatlandSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187877_139326523300017931PeatlandTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187877_142114623300017931PeatlandLRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPSPGAEG
Ga0187803_1011340733300017934Freshwater SedimentADLGIKSSWKDSRILLEFLVWQIVVGKEAGSEAPAGDALPAL
Ga0187803_1042168323300017934Freshwater SedimentKDSRILLEFLVWQVVVGKESAGVPTIGEELPDPTAEG
Ga0187848_1015661333300017935PeatlandKSSWKDSRILLEFLVWQIVVGKESAGDAALGGEVPLPATEN
Ga0187853_1020793633300017940PeatlandLGIKSSWKDSRILLEFLVWQIVVGKESPGEAALGGELPLPLTES
Ga0187879_1067653813300017946PeatlandSWKDSRILLEFLVWQVVIGRETAGVPTIGEELPAPTGEG
Ga0187879_1077381723300017946PeatlandLGIKSSWKDSRILLEFLVWQVVVGKESATIPTIGEDLPAPSTEG
Ga0187847_1075795413300017948PeatlandMRAVRRADLGIKSSWKDSRILLEFLVWQIVVGKQSTGEAALGGEVPLPSTES
Ga0187870_125138423300017998PeatlandDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPTAEG
Ga0187870_128584723300017998PeatlandDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187815_1050437123300018001Freshwater SedimentDLGIKSSWKDSRILLEFLVWQVVVGKESTGVPTIGEELPAPTAEG
Ga0187865_127094213300018004PeatlandMRAVRRADLGIKSSWKDSRILLEFLVWQIVVGKESSGEAAVGGEIPLPSTEG
Ga0187878_129557623300018005PeatlandLRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187884_1012736923300018009PeatlandADLGIKSSWKDSRILLEFLVWQIVVGKEPSSEGVLGGEIPLAATES
Ga0187873_131535123300018013PeatlandAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187873_139610013300018013PeatlandWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG
Ga0187860_121707013300018014PeatlandLRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPGGEG
Ga0187880_145091713300018016PeatlandDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG
Ga0187872_1014895333300018017PeatlandIKSSWKDSRILLEFLVWQVVVGKESATIPTIGEDLPAPSTEG
Ga0187861_1045689323300018020PeatlandVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPGGEG
Ga0187861_1047541023300018020PeatlandSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG
Ga0187861_1049011613300018020PeatlandALRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPSPGAEG
Ga0187889_1043650433300018023PeatlandWKDSKILLEFLVWQIVVGKAPSGEAALGDEVPVPSTES
Ga0187881_1046684413300018024PeatlandDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187883_1051133613300018037PeatlandDSRILLEFLVWQVVIGKETAGVPTIGEELPVTENV
Ga0187855_1008891313300018038PeatlandKDSRILLEFLVWQIVVGKESAGEGAVGGEVPLPTEG
Ga0187862_1049279633300018040PeatlandSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG
Ga0187851_1064160523300018046PeatlandGIKSSWKDSRILMEFLVWQIVVGKESAGEAALGGEVPLPSTEN
Ga0187859_1065556623300018047PeatlandRAVRRADLGVKSSWKDSRILLEFLVWQIVVGKEASGEAAVGGEVALPSTES
Ga0187858_1032940523300018057PeatlandGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG
Ga0187784_1100966623300018062Tropical PeatlandVRRTDLGIKSSWKDARILLEFLVWQVVVGKESAAIPTIGEELPVPAAES
Ga0187784_1122279533300018062Tropical PeatlandALRAVRRADLGIKSSWKDSKILLEFLVWQVVVGKESASVPTIGEELPAPTAEG
Ga0187772_1103924813300018085Tropical PeatlandDLGIKSSWKDSKILLEFLVWKIVVGKESSGEAALGGEVPVPSEG
Ga0187772_1107861313300018085Tropical PeatlandAMRAVRRADLGIKSSWKDSALLLEFLVWQIVVGKESSGDAALGGEIPMAAAEG
Ga0187769_1003072963300018086Tropical PeatlandKSSWKDSKVLLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0187769_1021011443300018086Tropical PeatlandKDARILLEFLVWQVVVGKESATIPTIGEDLPAPSTEG
Ga0187769_1087319133300018086Tropical PeatlandSWKDSRILLEFLVWQIVVGKDSSGEAALGGEVPLPSAES
Ga0187769_1112535623300018086Tropical PeatlandDLGIKSSWKDSKILLEFLVWQIVVGKWPSGEAALGNELPGISSEG
Ga0187769_1154220723300018086Tropical PeatlandDLGIKSSWKDSRILLEFLVWQIVVGKEPSGEAAVGGEVPLPSAES
Ga0187771_1119278613300018088Tropical PeatlandVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETAGVPTIGEELPAPTSEG
Ga0187770_1048896213300018090Tropical PeatlandQQALRAVRRTDLGIKSSWKDARILLEFLVWQVVVGKESAAIPTIGEELPVPATES
Ga0187770_1138534223300018090Tropical PeatlandADLGIESSWKDSRILLEFLVWQIVVGKAPSGEAAIGDEVPLPAAES
Ga0066669_1101000313300018482Grasslands SoilDLRIKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEQVPVSSAEG
Ga0181501_133040433300019230PeatlandKSSWKDSRILLEFLVWQIIVGKESAGEAALGGEIPLPATDS
Ga0181501_134031313300019230PeatlandIKSSWKDSRILLEFLVWQVIVGKESATIPTIGEDLPAPSTEG
Ga0187798_157293613300019275PeatlandTDLGIKSSWKDSRILLEFLVWQVVIGRESAGVPTIGEELPAPSAES
Ga0187800_124721523300019278PeatlandADLGIKSSWKDSRILLEFLVWQIVVGKESSAEAALGGEVPLPAAEV
Ga0187800_159653813300019278PeatlandALRAVRRTDLGIKSSWKDSRILLEFLVWQVVVGKESASIPTIGEELPAPVTEG
Ga0187797_125908323300019284PeatlandGIKSSWKDSRILLEFLVWQVIVGKESATVPTIGEDLPAPSTEG
Ga0182031_145026943300019787BogMQALRAVRRADLGIKSSWKDSRILLEFLVWQIVVGKEFNGEAALGGKFLCPRRIARD
Ga0208821_103576923300025432PeatlandDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG
Ga0208323_107186423300025439PeatlandALRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0208323_108372323300025439PeatlandALRAVRRTDLGIKSSWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG
Ga0208034_102832543300025442PeatlandKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPATEG
Ga0208692_106088333300025472PeatlandWKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAAEG
Ga0208692_111844923300025472PeatlandKDSKILLEFLVWQVVIGKETSGVPTIGEELPAPAGEG
Ga0209156_1030475233300026547SoilKSSWKDSRILLEFLVWQVVVGKASGGPLPVSEQVPVSSAEG
Ga0208827_114308523300027641Peatlands SoilALRAVRRTDLGIKSSWKDSRILLEFLVWQVVVGKESATIPTIGEDLPAPSTEG
Ga0265338_1106847313300028800RhizosphereADIGIKSSWKDSRILLEFLIWQIVVGKEASGEVALGGEVPMPASES
Ga0302270_1055971723300030011BogWKDSRILLEFLVWQIVVGKEASGEVAIGGEVPIES
Ga0316363_1025368213300030659Peatlands SoilVRRADLGIKSSWKDSRILLEFLVWQIVVGKESAGEAALGGEVPLPSTES
Ga0335085_1186928323300032770SoilRADLGIKSSWKDSKILLEFLVWQIVVGKASSGHATLSDEVPLPSADV
Ga0335078_1184670413300032805SoilDLRIKSSWKDSQILLEFLVWLIVVGKAPSGEAALGDVIPLPSTES
Ga0335081_1260802923300032892SoilLRAVRRTDLGIKSSWKDSRILLEFLVWQVVVGKESATIPTIGEDLPAPNTEG
Ga0335072_1147584523300032898SoilDLGIKSSWKDSRILLEFLVWQIVVGKESSADAALGGEVPVPSTEG
Ga0335077_1139319213300033158SoilTDLGIKSSWKDSRILLEFLVWQVVVGKESATIPTIGEDLPAPSTEG
Ga0326728_1005181013300033402Peat SoilDLGIKSSWKDSRILLEFLVWQIVVGKGASGEVALGGEIPLPSSES
Ga0326728_1069485233300033402Peat SoilADLGIKSSWKDSRILLEFLVWQIVVGKESAGEAALGGEVPLPES
Ga0326728_1116872513300033402Peat SoilRRTDLGIKSSWKDSRILLEFLVWQVVVGKESATVPTIGEDLPAPGNEG
Ga0314861_0508892_3_1433300033977PeatlandTDLGIKSSWKDSKILLEFLVWQVVIGKETAGAPTIGEELPAPAADG
Ga0371487_0478586_372_5243300033982Peat SoilAVRRTDLGIKSSWKDSRILLEFLVWQVVVGKESATIPTIGEDLPAPSTEG


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