Metagenome Family F086868

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086868
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	91 residues
Representative Sequence	MSEFTVWMQSNWYALGNLLFQFAFLAAGVWFAREILRTIRASQEQVGALLKLSSTGASTERHSPIAVAERTLAGASPYWLTPTEIPPVG
Number of Associated Samples	90
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.09 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.182 % of family members)
Environment Ontology (ENVO)	Unclassified (46.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.99% β-sheet: 0.00% Coil/Unstructured: 47.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01872	RibD_C	6.36
PF04011	LemA	2.73
PF08448	PAS_4	2.73
PF08463	EcoEI_R_C	2.73
PF01288	HPPK	2.73
PF14534	DUF4440	2.73
PF14294	DUF4372	1.82
PF08867	FRG	0.91
PF02518	HATPase_c	0.91
PF00355	Rieske	0.91
PF07704	PSK_trans_fac	0.91
PF00990	GGDEF	0.91
PF07963	N_methyl	0.91
PF13604	AAA_30	0.91
PF01435	Peptidase_M48	0.91
PF01381	HTH_3	0.91
PF00989	PAS	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	6.36
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	6.36
COG0801	7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)	Coenzyme transport and metabolism [H]	2.73
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	2.73
COG4096	Type I site-specific restriction endonuclease, part of a restriction-modification system	Defense mechanisms [V]	2.73
COG4423	Uncharacterized conserved protein	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.27 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.82 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.82 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.82 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.82 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.82 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.82 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101822988	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300001089\|JGI12683J13190_1022522	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300001137\|JGI12637J13337_1028077	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300001471\|JGI12712J15308_10218135	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300001593\|JGI12635J15846_10188517	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300001593\|JGI12635J15846_10678150	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300002245\|JGIcombinedJ26739_100055606	All Organisms → cellular organisms → Bacteria	3613	Open in IMG/M
3300002245\|JGIcombinedJ26739_100445809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300002245\|JGIcombinedJ26739_101284894	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300002557\|JGI25381J37097_1011165	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300002560\|JGI25383J37093_10107128	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300002914\|JGI25617J43924_10308496	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005167\|Ga0066672_10547344	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005174\|Ga0066680_10114161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1665	Open in IMG/M
3300005554\|Ga0066661_10411629	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005557\|Ga0066704_10719282	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005568\|Ga0066703_10758226	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005598\|Ga0066706_10511955	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300005921\|Ga0070766_10028823	All Organisms → cellular organisms → Bacteria → Acidobacteria	3004	Open in IMG/M
3300006086\|Ga0075019_11015029	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006797\|Ga0066659_10372332	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300007255\|Ga0099791_10199516	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300007255\|Ga0099791_10463933	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300007258\|Ga0099793_10415565	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009038\|Ga0099829_10607628	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300009088\|Ga0099830_10039035	All Organisms → cellular organisms → Bacteria → Acidobacteria	3275	Open in IMG/M
3300009088\|Ga0099830_11444337	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300009089\|Ga0099828_10263061	All Organisms → cellular organisms → Bacteria → Acidobacteria	1548	Open in IMG/M
3300009089\|Ga0099828_11963675	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010337\|Ga0134062_10359642	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300011120\|Ga0150983_16069081	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300011269\|Ga0137392_10604512	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300011270\|Ga0137391_10577190	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300012096\|Ga0137389_10815897	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300012189\|Ga0137388_10385462	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300012189\|Ga0137388_10863601	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300012200\|Ga0137382_10608055	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300012201\|Ga0137365_10123962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1943	Open in IMG/M
3300012203\|Ga0137399_10777252	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300012208\|Ga0137376_11027012	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012285\|Ga0137370_10475236	Not Available	763	Open in IMG/M
3300012349\|Ga0137387_10400433	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012351\|Ga0137386_10044680	All Organisms → cellular organisms → Bacteria	3047	Open in IMG/M
3300012357\|Ga0137384_10248810	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300012359\|Ga0137385_10880660	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012361\|Ga0137360_10161691	All Organisms → cellular organisms → Bacteria → Acidobacteria	1785	Open in IMG/M
3300012361\|Ga0137360_10506545	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300012362\|Ga0137361_10331043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1396	Open in IMG/M
3300012363\|Ga0137390_10172447	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300012363\|Ga0137390_10887998	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300012363\|Ga0137390_11566995	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012582\|Ga0137358_10425539	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300012685\|Ga0137397_10183969	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300012685\|Ga0137397_10571318	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012917\|Ga0137395_10005688	All Organisms → cellular organisms → Bacteria	6438	Open in IMG/M
3300012918\|Ga0137396_10159954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1644	Open in IMG/M
3300012918\|Ga0137396_10257844	Not Available	1287	Open in IMG/M
3300012922\|Ga0137394_10292884	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300012922\|Ga0137394_10768880	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300012925\|Ga0137419_10142572	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300012929\|Ga0137404_10531131	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300012944\|Ga0137410_10058656	All Organisms → cellular organisms → Bacteria → Acidobacteria	2763	Open in IMG/M
3300012944\|Ga0137410_10201842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1540	Open in IMG/M
3300012975\|Ga0134110_10403687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300015051\|Ga0137414_1091899	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300015053\|Ga0137405_1234870	All Organisms → cellular organisms → Bacteria → Acidobacteria	1634	Open in IMG/M
3300015054\|Ga0137420_1173230	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300015054\|Ga0137420_1206073	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300015241\|Ga0137418_10405150	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300015241\|Ga0137418_11075481	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300015357\|Ga0134072_10092398	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300017822\|Ga0187802_10319768	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300018468\|Ga0066662_13017456	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300020022\|Ga0193733_1030709	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300020170\|Ga0179594_10126320	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300020199\|Ga0179592_10382851	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300020579\|Ga0210407_10261961	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300020580\|Ga0210403_10208238	All Organisms → cellular organisms → Bacteria → Acidobacteria	1605	Open in IMG/M
3300020580\|Ga0210403_10315746	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300020580\|Ga0210403_11224974	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300020581\|Ga0210399_11274819	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300021180\|Ga0210396_10794162	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300021181\|Ga0210388_10123797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	2231	Open in IMG/M
3300021406\|Ga0210386_10409453	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300021477\|Ga0210398_10724998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	803	Open in IMG/M
3300024288\|Ga0179589_10627501	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300024330\|Ga0137417_1096714	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300026296\|Ga0209235_1057104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1843	Open in IMG/M
3300026301\|Ga0209238_1229217	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300026304\|Ga0209240_1279392	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300026320\|Ga0209131_1106091	All Organisms → cellular organisms → Bacteria → Acidobacteria	1474	Open in IMG/M
3300026323\|Ga0209472_1238401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300026333\|Ga0209158_1330545	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300026335\|Ga0209804_1083549	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300026499\|Ga0257181_1095090	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300026514\|Ga0257168_1042844	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300026551\|Ga0209648_10025409	All Organisms → cellular organisms → Bacteria	5176	Open in IMG/M
3300026551\|Ga0209648_10369538	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300026557\|Ga0179587_10928884	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300027545\|Ga0209008_1138858	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300027562\|Ga0209735_1105140	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300027643\|Ga0209076_1129109	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300027669\|Ga0208981_1030861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1370	Open in IMG/M
3300027889\|Ga0209380_10385070	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300027898\|Ga0209067_10060828	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
3300027903\|Ga0209488_10021376	All Organisms → cellular organisms → Bacteria → Proteobacteria	4698	Open in IMG/M
3300031715\|Ga0307476_11326587	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300031720\|Ga0307469_10450416	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300031720\|Ga0307469_12144710	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300032205\|Ga0307472_100720057	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.27%
Aquatic	Environmental → Aquatic	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.27%
Sediment	Environmental → Aquatic → Sediment	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.55%
Loam	Environmental → Terrestrial → Soil → Loam	12.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018229883	3300000364	Soil	MNESTWIQSNWYGLGNLVAQFAFLAAGTWFARKILRTLRASQEQVGALLKLSMTGSVAERPSSSVIAERTLSGASPYWLTP
JGI12683J13190_10225221	3300001089	Forest Soil	MTEFTTWMQSNWYALGNLLCQFVFLAAGIWFARKILTTMRASQEQVGALLKLPVTGAIAERHSPGAVAERSFASASPFWLTPTEIPPVG
JGI12637J13337_10280771	3300001137	Forest Soil	MSEFTIWIQSNWYALGNLFVQFGFLAAGVWFARKILKTMRASQEQVGALLKLSLTGPISERPSPIAAADRSFAN
JGI12712J15308_102181352	3300001471	Forest Soil	MTEFTAWMQSNWYALGNLFIQFGFLAAGVWFARRILRTMRASQEQVGALLKLSFTGAISERLPSMATAERSFASTSPYWLMPSEIPPVPLP
JGI12635J15846_101885172	3300001593	Forest Soil	MTEFTTWMQSNWYALGNLLCQFVFLAAGIWFARKILTTMRASQEQVGALLKLPVTGAIAERHSPGAVAERSFASASPFWLTPTEIPPVGPLAFPESGPGRWAVARHSLIV
JGI12635J15846_106781501	3300001593	Forest Soil	MSEFTAWMQSNWYALGNLLFQFAFLAASVWFAREILRTIRASQEQVGALLKLSITGASTERHSPIAVAERTLAGASPYWLTPSEM
JGIcombinedJ26739_1000556064	3300002245	Forest Soil	MTEFTAWMQSNWYALGNLFIQFGFLAAGVWFARRILRTMRASQEQVGALLKLSFTGAISERLPSMATAERSFASTSPYWLMPSEIPPVPLPETQESG
JGIcombinedJ26739_1004458091	3300002245	Forest Soil	MIESTWIQSNWYELGNLLSQFAFLAAGIWFARKILRTMRASQEQFGALLKLSMTSSVTERPSSSVIAERTLSGASPY
JGIcombinedJ26739_1012848941	3300002245	Forest Soil	MNEFTAWVQSNWYALGNLLAEFGFLAAGVWFARKILTTMRASQEQVGALLKLSFTGSTSERLPSTATPERSFAN
JGI25381J37097_10111653	3300002557	Grasslands Soil	MSEFTTWMQSNWYALGSLLLQVAFLAAVVRFAGEILRTMRASQEQVGALLKLAVTGALSERTAPSTVTERPFLRTSPYWLTPTEIPPVGPLELPEGSPSRWMMAR
JGI25383J37093_101071281	3300002560	Grasslands Soil	MNEFSAWMQSNWYALGNLFIEGAFLAAGVWFARKFLRTIRASQEQVGALLKLSLTGAISERHSTSGAAERSFASASPYWLTPAEIPPAPAQELHESGPSRLAVARQRV
JGI25617J43924_103084961	3300002914	Grasslands Soil	MSEFTGWMQSNWYALGNLLFQFAFLAAGVWFAREMLRTMGASQEQIGALLKLSITDATTERHSPVAVAERTLAGASPYWLTPGEIPPVGPLESPENGPN
Ga0066672_105473441	3300005167	Soil	MSEFTTWMQSNWYALGSLLLQVAFLAAVVRFAGEILRTMRASQEQVGALLKLAVTGALSERPAPSTVTERTFLRASPYWLTP
Ga0066680_101141613	3300005174	Soil	MNELAAWIQNNWYALGNLLIQSAFLAAGVWFARTILRTIRASQEQVGALLKLLVTGTTAERHSSNATTDRPFANASPYWLAPAEAPTVGTPELYASRP
Ga0066661_104116292	3300005554	Soil	MSEFTTWMQSNWYALGNLFLQFGFLAAGVRFAREILRTMRASQEQVGALLKLSVTGERHSSSAERSFANASPYWLTPMEIPPV
Ga0066704_107192821	3300005557	Soil	MNELAAWIRNNWYALGNLLIQSAFLAAGVWFARTILRTIRASQEQVGALLKLLVTGTTAERHSSNATTDRPFANASPYWLAPAEAPTVGTP
Ga0066703_107582262	3300005568	Soil	MGEFTAWMQSNWYALGSLLFQFAFLAASVWFAREILRTIRASQEQVGALLKLSITGANTERHSQIAVAERTLAGASPYWLTPTK
Ga0066706_105119551	3300005598	Soil	MNEMSAWIRSNWYALGNLFIEGAFLAAAVWFGRKILRSLRASQEQVGALLKMSVTGAISERQSSSGTPERLFASASPYWLTPPE
Ga0070766_100288234	3300005921	Soil	MNEFTAWMQSNWYALGNLFIQVAFLAAGVWFARKILKTIRASQEQVGALLKLSFTAAVSERPSPIAATDRSFANASPYWLTPEE
Ga0075019_110150292	3300006086	Watersheds	MNDFTAWMQSNWYALGNLLSQFAFLAAGVWFARQILKTMRASQEQVGALLKLSVTGAITDRHSSSAAAGHPFASASPY
Ga0066659_103723322	3300006797	Soil	MSEFTAWMQSNWYALGNLLFQYAFLAAGAWFAREILRTIRASQEQFGALVKLSITGATTERHSPIAVAERTLAGVSPYWLTPTEMPPVGPLELPENDPGRWA
Ga0099791_101995162	3300007255	Vadose Zone Soil	MSEFTVWMQSNWYALGNLLFQFAFLAAGVWFAREILRTIRASQEQVGALLKLSSTGASTERHSPIAVAERTLAGASPYWLTPTEIPPVG
Ga0099791_104639332	3300007255	Vadose Zone Soil	MNESTWIQSNWYELGNLLSQIAFLAAGIWFARKILRTIRASQEQVGALVKLSVTGSVAERHSSSVIAERTLTGGSPYWL
Ga0099793_104155652	3300007258	Vadose Zone Soil	MNEFTAWIQSNWYALGNLLSQFVFLAAGVWFARKILRTLRASQEQVGALLKLSVTGAATERQSSNAASERSFANASPYWLTPSELPLAGSQEPRESR
Ga0099829_106076282	3300009038	Vadose Zone Soil	MNELTTWVQSNWYALGNLLCEFVFLAAGIWFARRILKTMRASQEQVGALLKLSVTGAINERQSSSAAVERPFASASPYWLTPEEVPSAGL
Ga0099830_100390353	3300009088	Vadose Zone Soil	MNEFSTWMQSNWYAVGNLLSQFVFLAAGIWFARKILRTMRASQEQVGALLKLSVAGATSERHSSSAVAERSFASA
Ga0099830_114443371	3300009088	Vadose Zone Soil	MTEFTTWMQSNWYALGNLLCQFVFLAAGIWFARKILTTMRASQEQVGALLKLSVTGAIAERQSPGAVAERSFASASPFWLTPTEIPPVGPLELSE
Ga0099828_102630611	3300009089	Vadose Zone Soil	MNEFSTWVQSNWYALGNLLIEVAFLAAGVWFARKFLRTIRASQEQFGAFLKLSVTGAISERPASSAVAERSF
Ga0099828_119636752	3300009089	Vadose Zone Soil	MNEMSAWIQSNWYALGNLFIEGAFLAAAVWFGRRILRTLRASQEQVGALLKMSVTGAIAERQSSNGAADRSFANASPYWLTPPEVPAAAPLQELHE
Ga0134062_103596421	3300010337	Grasslands Soil	MQSNWYALGSLLLQVAFLATVVRFAGEILRTMRASQEQVGALLKLAVTGALSERTAPSTVTERPFLRTSPYWLTPTEIP
Ga0150983_160690811	3300011120	Forest Soil	MTDFTAWMQSNWYALGNLLIQFGFLAAGVWFARKILMTMRASQEQVGALLKLSFTGAISSERLPSVAPAERSFATASPYWLMPAETPPVNLPEPQESGPGRWALAAIAPSCGCRRR*
Ga0137392_106045122	3300011269	Vadose Zone Soil	MNEMSAWIQSNWYALGNLFIEGAFLAAVVWFGRKILRTLRASQEQVGALLKISVTGAITERTSSPAASEGTFANASPYWLTP
Ga0137391_105771901	3300011270	Vadose Zone Soil	MNEMSAWIQSNWYALGNLFIEGAFLAAAVWFGRRILRTLRASQEQVGALLKMSVTGAISERQSSSGTPERSFANASPYWLTPPEVPAAAPL
Ga0137389_108158972	3300012096	Vadose Zone Soil	MNEYTWIQANWYALGNLVAQFAFLAAGIWFARKILRTMRASQEQVGALLKLSVTGAVAERPSSSVIAERTLAGASPYWLTPAEPTPSVLSEPAAMGPTRWEV
Ga0137388_103854623	3300012189	Vadose Zone Soil	MNEFAAWIQNNWYALGNLFIQFAFLAAGVWFARTILRTIRASQEQVGALLKLSVTGTTADRHSSNAADRSYANASPYWLTPAETSPGSLP
Ga0137388_108636012	3300012189	Vadose Zone Soil	MNELSTWMQSNWYALGNLFIEGAILAAVVWFARKFLRTIRASQEQVGALLKMSVTGAIAERQSSSGAAERSFASASPYWLTPSEAPAAPLQEL
Ga0137382_106080552	3300012200	Vadose Zone Soil	MGEFTAWMQSNWYALGNLLLQFAFLAASVWFAREILRTMRALQEQFGALVKLSITGATTDRHSPIAVAERTLTGASPYWLTPTEIPPVGPLELPENDPGRWAVARH
Ga0137365_101239623	3300012201	Vadose Zone Soil	MNEFAAWIQSNWYALGNLFIQLAFLAAGVWFARIILRTIRASQQQVGALLKLSITGTTAERHSSSAAADRPFANASPYWLAPSEIPSVSTPEFRE
Ga0137399_107772521	3300012203	Vadose Zone Soil	MSEFTDWMQSNWYALGNLLFQFAFLAAAVWFAREMLKTIRASQEQVGALLKLSITGAMTERHSPIAVAERTLAGASPYWLTPTEIPPVGPQEPPENGPGRWAV
Ga0137376_110270121	3300012208	Vadose Zone Soil	MSEFTAWMQSNWYALGNLLFQYAFLAAGVWFAREILRTMRALQEQFGALVKLSITGATTERHSPIAVAERTLAGASPYWLTPTE
Ga0137370_104752361	3300012285	Vadose Zone Soil	MSEFTDWMQSNWYALGNLLFQYAFLAAGVWFAREILRTMRALQEQFGALVKLSITGATTERHSPIAVAERTLAG
Ga0137387_104004331	3300012349	Vadose Zone Soil	MNEFSAWMQSNWYALGNLFIEGAFLAAGVWFARKFLRTIRASQEQVGALLKLSLTGAISERHSTSGAAERSFASASPYWLTPAEIPPAPAQELHESGPSRLAVARQR
Ga0137386_100446801	3300012351	Vadose Zone Soil	MNEFSAWMQSNWYALGNLFIEGAFLAAGVWFARKFLRTIRASQEQVGALLKLSLTGAISERHSTSGAAERSFASASPYWLTPAEIPPAPAQELHESGPSRLAV
Ga0137384_102488103	3300012357	Vadose Zone Soil	MSEFTTWMQSNWYALGSLLLQVAFLAAVVRFAGEILRTMRTSQEQVGAVLKLAVTGALSERPAPSTVTERPFLRASPYWLTPTEIPPVGPLE
Ga0137385_108806601	3300012359	Vadose Zone Soil	MGEFTAWMQSNWYALGNLLFQYAFLAAGVWFAREILRTMRASQEQFGALVKLSITGATTERHSPIAVAERTLAGASPY
Ga0137360_101616914	3300012361	Vadose Zone Soil	MSEFTIWMQSNWYALGGLLLQVAFLAAVVRFAGEMLRTMRASQEQVGALVKLAITGALAERPAPSTVAERPFLKASPYW
Ga0137360_105065452	3300012361	Vadose Zone Soil	MNEMSAWIQSNWYALGNLFLEGAFLAAAVWFGRKILRTLRASQEQVGALLKMSVTGAISERQSSSGAAERSFANASPYWLTP
Ga0137361_103310432	3300012362	Vadose Zone Soil	MNEMSAWIQSNWYALGNLFIEGAFLAAVVWFGRRILRTLRASQEQVGALLKMSVTGAISERQSSSGAAERSFANASP
Ga0137390_101724473	3300012363	Vadose Zone Soil	MNEFSTWMQSNWYAVGNLLSQFVFLAAGIWFARKILRTMRASQEQVGALLKLSVAGATSERHSSSAVAERSFASASPYWLTPAEVTSAGQPKPPESGPSRWAVAEHS
Ga0137390_108879981	3300012363	Vadose Zone Soil	MSEFTGWMQSNWYALGNLLFQFAFLAAGVWFAREMLRTMRASQEQIGALLKLSITDATTERHSPVAVAERTLAGASPYWLTPGEIPPVGPLESPENGPS
Ga0137390_115669951	3300012363	Vadose Zone Soil	MNEMSAWIQSNWYALGNLFIEGAFLAAAVWFGRKILRTLRASQEQVGALLKMSVTGAISERQPSSGAADRSFANASRYWLTPPEVPAAAPLQELHESKPGLGHRAI
Ga0137358_104255391	3300012582	Vadose Zone Soil	MNDFTAWMQNNWYTLGNLLSQFAFLAAGVWFARKILKTMRASQEQVGALLKLSVTGAITDRHSSSAVADRPFASASPYWLTPTEIPPVAPLELPETGPSRWAIARHSV
Ga0137397_101839693	3300012685	Vadose Zone Soil	MNDFTAWMQNNWYTLGNLLSQFAFLAAGVWFARKILKTMRASQEQVGALLKLSVTGAITDRHSSSAVADRPFASASPYWLTPTEIPPVAPLELPETGPSRWAIARH
Ga0137397_105713181	3300012685	Vadose Zone Soil	MNEYTWIQSNWYALGNLLAQFAFLAAGIWFARKILRTMRASQEQFGALLKLSMSGPVAERPSTSVIAERTLNGASPYWLTPSEIPP
Ga0137395_100056884	3300012917	Vadose Zone Soil	MNEVTVWIQANWYEVGTLLSEFVFLAAGIWFARKILKTMRASQEQVGALLKLSVTGAITERQPANPGAERSFAAASPYWLTPTEVPPNQLNLPESGPSRWA
Ga0137396_101599541	3300012918	Vadose Zone Soil	MNEYTWIQSNWYALGNLLAQFAFLAAGIWFARKILRTMRASQEQVGALLKLSVTGSVAERPPSSIIAERTLSGASPYWLTPPE
Ga0137396_102578444	3300012918	Vadose Zone Soil	MSEFTAWMQNNWYALGNLLGQFVFLAAGIWFARKILRTMRASQEQVGALLKMSVTGAVADRHWPSPAERPFATASPYWLTPAELPAVVSPEPQESGPSRWAVARH
Ga0137394_102928843	3300012922	Vadose Zone Soil	MNEYTWIQSNWYALGNLLAQFAFLAAGIWFARKILRTMRASQEQFGALLKLSMSGPVAERPSTSVIAERTLNGASPYWLTP
Ga0137394_107688801	3300012922	Vadose Zone Soil	MNEYTWIQANWYALGNLIAQFAFLVAGVWFARKILRTMRASQEQVGALLKLSLTGSVAERPSSSVIAERTLAGASPYWLTPPDSTPSILSEPAETGPT
Ga0137419_101425721	3300012925	Vadose Zone Soil	MNGSAWIQSNWYELGNLLSQFAFLAAGIWFARKILRTMRASQEQVGALLKLSVTGSLTERPSSSVIAERTLAGVSPYWLTPPEISPVGAAAPQAENPSRRAVVWHKL
Ga0137404_105311312	3300012929	Vadose Zone Soil	MNEFTVWVQANWYEVGTLLSEFVFLAAGIWFARKILKTMRASQEQVGALLKLSVTGAITERQPANPGAERSSAAASPYWLTPTEVP
Ga0137410_100586563	3300012944	Vadose Zone Soil	MNDFTAWMQNNWYTLGNLLSQFAFLAAGVWFARKILKTMRASQEQVGALLKLSVTGAITDRHSSSAVADRPFASASPYWLTPTEIPPVAPLELPET
Ga0137410_102018421	3300012944	Vadose Zone Soil	MNESTWIQSNWYELGNLLSQIAFLAAGIWFARKILRTIRASQEQVGALLKLSVTGSVAERHSSSVIAERTLTGGSPYWLTPPEPTPAVLSEPAETGPTRWKVARHSV
Ga0134110_104036871	3300012975	Grasslands Soil	MSEFTTWMQSNWCALGSLLLQIALLAAGVRFAREILRTLRASQEHVAALLKLSVTGAITERHSASTVAERSFANASPYWLTPTE
Ga0137414_10918993	3300015051	Vadose Zone Soil	MGEFTAWMQSNWYALGNLLFQFAFLAASVWFAREILRTMRASQELVGALLKLSTTGATTERHSPIAVAERALAGASPYWLTPTEIPPVGPLELL
Ga0137405_12348701	3300015053	Vadose Zone Soil	MNESTWIQSNWYELGNLLSQIAFLAAGIWFARKILRTIRASQEQVGALLKLSLTGSVAERHSSSAVAERTLAGAS
Ga0137420_11732305	3300015054	Vadose Zone Soil	MTEFTTWMQSNWYALGNLLCHFVFLAAGIWFARKILTTMRASQEQVGALLKLSVTGAIAERQSPSAVAERSFASASPFWLTPTEIPPVGPLEF
Ga0137420_12060731	3300015054	Vadose Zone Soil	MSEFTDWMQSNWYALGNLLFQFAFLAAAVWFAREMLKTIRASQEQVGALLKLSITGAMTERHSPIAVAERTLAGASPYWLTPTEIPPVGPQEPPENGPGRWAVVRGCPAQPG
Ga0137418_104051501	3300015241	Vadose Zone Soil	MNEYTWIQSNWYALGNLLAQFAFLAAGIWFARKILRTMRASQEQFGALLKLSMSGPVAERPSTSVIAERTLNGASPYWLTPSEIPPVSAPEPQVNGPSRLVV
Ga0137418_110754811	3300015241	Vadose Zone Soil	MNELSTWMQSNWYALGNLFIEGAILAPVVWFARKFLRTIRASQEQVGALLKMSVTGAIAERQSSSGAAERPFASVSP
Ga0134072_100923981	3300015357	Grasslands Soil	MSEFTTWMQSNWYALGSLLLQVAFLATVVRFAGEILRTMRASQEQVGALLKLAVTGALSERTAPSTVTERPFLRT
Ga0187802_103197681	3300017822	Freshwater Sediment	MNEFTDWMQSNWYALGNLLAQIGFLAAGVWFARKILETMRASQEQFGALLKLSFTGPISERPSSIAGTDRSFAN
Ga0066662_130174561	3300018468	Grasslands Soil	MNEFSAWMQSNWYALGNLFIEGAFLAAGVWFARKFLRTIRASQEQVGALLKLSLTGAISERHSTSGAAERSFASASPYWLTPAE
Ga0193733_10307091	3300020022	Soil	MSEFTTWIESNWYALGSLLLQVAFLTAVVRFAGEILRTMRASQEQVGALVKLAVSGALSERPAPSTVTERPFLRASPYWL
Ga0179594_101263202	3300020170	Vadose Zone Soil	MSELTTWMQSNWYALGNLLLQIAFLAAGVRFAREILRTMRASQEQVGELLKLSVTGALSERHSSSALGERSFANASPYWLTPTEIPPV
Ga0179592_103828511	3300020199	Vadose Zone Soil	MNDFTAWIQNNWYTLGNLLSQFAFLAAGVWFARKILKTMRASQEQVGALLKLSVTGAITDRHSSSAVADRPFASTSPYWLTP
Ga0210407_102619611	3300020579	Soil	MNDFTAWMQSNWYALGNLLSQFVFLAAGVWFARQILKTIRQSQEQVGALLKLSVTGAVTERHSSSTVSEHPFASVSPYWLTPTELPPVTPLPLPETGPSRWAVARH
Ga0210403_102082383	3300020580	Soil	MNEFSTWMQSNWYALGNLLLQGAFLTAAIWFARDILRTIRASQEQVGALLKLSITGALTDRHSATAPDRPFATASPYWLTPP
Ga0210403_103157462	3300020580	Soil	MTEFTTWMQSNWYALGNLLCQFVFLAAGIWFARKILTTMRASQEQVGALLKLSVTGAIAERQSPGAVAERSFASASPFWLTPTEMPPVGPLAFPESGPGRWAVARHSL
Ga0210403_112249742	3300020580	Soil	MNEFTAWMQSNWYALGNLLAQFAFLAAAVWFARKILKTIRASQEQLGALLKLSFTGAISERPSSMAAEHRSFANASPYWLM
Ga0210399_112748191	3300020581	Soil	MNEFTAWIQSNWYALGNLLAQFAFLAAGVWFARKILKTIRASQEQVGALLKLSFTGAIGERPSPMAATDRSFANASPYWLTPEEKLPV
Ga0210396_107941622	3300021180	Soil	MNEFSTWMQSNWHALGTLLLQAAFLTAGVWFAREILKSIRASQEQIGALLKLSLTGAIPERQSPTAAAERFFANASPYW
Ga0210388_101237971	3300021181	Soil	MNEFTAWIQSNWYALGNLLAQFAFLAAGVWFARKILKTIRASQEQVGALLKLSFAGAISERPSSIAIADRSFANASPYWLMPEEKP
Ga0210386_104094532	3300021406	Soil	MSEFTAWIQSNWYALGNLLVQFGLLAAGVWFARKILKTIRASQEQVGALLKLSFTGAISERPSSIAAERSFASASPYWLTPAEIPPVAPPEPQESGPSRWAVARHRV
Ga0210398_107249982	3300021477	Soil	MNEFTAWVQSNWYALGNLLALFGFLALGVWFARKILKTIRAFQEQLGALLKLSFAGAISERPSSIAAQDRPFANVSPYWLMPEEKPLVDLPDPQES
Ga0179589_106275011	3300024288	Vadose Zone Soil	MNDFTAWMQNNWYTLGNLLSQFAFLAAGVWFARKILKTMRASQEQVGALLKLSVTGAITDRHSSSAVADRPFASASPYWLTPTEIPPVAPLELPETGPSRWAIARHAVAAA
Ga0137417_10967141	3300024330	Vadose Zone Soil	MTEFTTWMQSNWYALGNLLCQFVFLAAGIWFARKILTTMRASQEQVGALLKLSVTGALAERQSPSAVAERSFASASPFWLTPTEIPPVGPLELSESGPGRWAVARHTSQPDRVVADA
Ga0209235_10571041	3300026296	Grasslands Soil	MNEFSAWMQSNWYALGNLFIEGAFLAAGVWFARKFLRTIRASQEQVGALLKLSLTGAISERHSTSGAAERSFASASPYWLTP
Ga0209238_12292172	3300026301	Grasslands Soil	MGEFTAWMQSNWYALGNLLFQFAFLAAAVWFAREMLKTIRASQEQVGALLKLSITGATTERHSPIAVAERALAGASPYWLTP
Ga0209240_12793921	3300026304	Grasslands Soil	MNDFTAWMQNNWYTLGNLLSQFAFLAAGVWFGRKILKTMRASQEQVGALLKLSVTGAITDRHSSSAVADRPFASASPYWLTPTEIPP
Ga0209131_11060911	3300026320	Grasslands Soil	MNEMSAWIQSNWYALGNLFIEGAFLAAVVWFGRRILRTLRASQEQVGALLKMSVTGAISERQSSSGAAERSFANASPYWLT
Ga0209472_12384011	3300026323	Soil	MSEFTTWMQSNWYALGSLLLQVAFLATVVRFAGEILRTMRASQEQVGALLKLAVTGALSERTAPSTVTERPFLRTSPYWLTPTEIPPVGPLELPEGSPSR
Ga0209158_13305451	3300026333	Soil	MNEMSAWIQSNWYALGNLFIEGAFLAVAVWFGRKILRTLRASQEQVGALLKMSVTGAISERQSSNGAPERPF
Ga0209804_10835491	3300026335	Soil	MSEFTTWMQSNWYALGSLLLQVAFLAAVVRFAGEILRTMRASQEQVGALLKLAVTGALSERPAPSTVTERTFLRASPYWLTPTEIPP
Ga0257181_10950901	3300026499	Soil	MNEYTWIQSNWYALGNLLAQFAFLAAGIWFARKILRTMRASQEQFGALLKLSMSGPVAERPSTSVIAERTLSGASPYWLTPSEIPPVSAPEPQAKG
Ga0257168_10428441	3300026514	Soil	MNEFTAWMQNNWYALGNLLSQIAFLGAGVWFARKILKTMRASQEQVGALLKLSVTDTISERHTPSAAAGRSFASGSPYWLTPTEIPPV
Ga0209648_100254096	3300026551	Grasslands Soil	MSEFTGWMQSNWYALGNLLFQFAFLAAGVWFAREMLRTMGASQEQIGALLKLSITDATTERHSPVAVAERTLAGASPYWLTPGEIPPVGPLESPENGPNRL
Ga0209648_103695382	3300026551	Grasslands Soil	MTEFTTWMQSNWYALGNLLCQFVFLAAGIWFARKILTTMRASQEQVGALLKLSVTGALAERQSPSAVAERSFASASPFWLTPTEIPPVGPLELSE
Ga0179587_109288842	3300026557	Vadose Zone Soil	MNEMSAWIRSNWYALGNLFIEGAFLAAAVWFGRKILRTLRASQEQVGALLKMSVTGATSERQSSSGTPERLFASTSPYWLTPPEVPVAAAAPLQE
Ga0209008_11388581	3300027545	Forest Soil	MSEFTAWIQSNWYALGNLLVQFGLLAAGVWFARKILKTIRASQEQVGALLKLSFTGAISERPPSIAAAERSFASASPYWLTPAEIPPVAP
Ga0209735_11051402	3300027562	Forest Soil	MSEFTVWMQSNWYALGNLLFQFAFLAAGVWFAREILRTIRASQEQVGALLKLSITGANTERHSPIAVAERTLAGASPYWLTPTEIPPIGPLGPPENGPGRLAVARH
Ga0209076_11291092	3300027643	Vadose Zone Soil	MNEYTWIQSNWYALGNLLAQFAFLAAGIWFARKILRTMRASQEQFGALLKLSMSGPVAERPSTSVIAERTLNGASPYWLTPSEIPPVSAPEPQVNGPGR
Ga0208981_10308613	3300027669	Forest Soil	MSEFTDWMQSNWYALGNLLFQFAFLAAAVWFAREMLKTIRASQEQVGALLKLSITGAMTERHSPIAVAERTLAGASPYWLTPTEIPPVGPQE
Ga0209380_103850703	3300027889	Soil	MNEFTAWMQSNWYALGNLFIQVAFLAAGVWFARKILKTIRASQEQVGALLKLSFTAAVSERPSPIAATDRSFANASPYWLTPEEKP
Ga0209067_100608283	3300027898	Watersheds	MNEFTTWMQSNWYALGNLLSQFAFLAAGIWFARKILRTMRASQEQFGVLLKLSLTGSISERHSPSAPAERSFASASPYWLTPEEVPPAG
Ga0209488_100213764	3300027903	Vadose Zone Soil	MGEFTAWMQSNWYALGNLLFQFAFLAASVWFAREILRTMRASQEQVGALLKLSITGATTERHSPIAVAERALAGASPYWLTPTEIPPVGPLPRPDEKPREPRGLHCL
Ga0307476_113265871	3300031715	Hardwood Forest Soil	MNEFTAWVQSNWYALGNLFIQLGFLAAGVWFARKILTTMRASQEQVGALLKLSLTGATSERLLSTATPERSFANA
Ga0307469_104504161	3300031720	Hardwood Forest Soil	MNEFTSWMQGNWYALGNLLSQFAFLAAGVWFARKILRAMRASQEQVGALLKLSVTDAMQERHSASMNAERSFATVSPY
Ga0307469_121447101	3300031720	Hardwood Forest Soil	MNGSTWIQSNWYELGNLLSQVAFLAAGIWFVRNLLRTIRASQEQIGALLKLSITGSLTERHTTSVMAERTLAGASPYWLTPAEPTPPVLSEPAEIGPSRWEVAC
Ga0307472_1007200571	3300032205	Hardwood Forest Soil	MSEFTTWIQSNWYALGSLLLQVAFLAAVVRFAGEILRTMRASQEQVGALVKLAVSGALSERPAPSTVTERPFLRASPYWLTPTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086868

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences