NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F086856

Metagenome / Metatranscriptome Family F086856

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086856
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 63 residues
Representative Sequence WKSIAKHNGQATLLLADLYLKGDGVSKNCDQARVLLDSAARKGISGAGERLRNLQAFGCQ
Number of Associated Samples 91
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.93 %
% of genes near scaffold ends (potentially truncated) 97.27 %
% of genes from short scaffolds (< 2000 bps) 94.55 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.182 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(33.636 % of family members)
Environment Ontology (ENVO) Unclassified
(33.636 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.909 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.73%    β-sheet: 0.00%    Coil/Unstructured: 52.27%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.118.18.1: HCP-liked1ouva11ouv0.846
a.118.18.1: HCP-liked1klxa_1klx0.78356
a.118.8.1: Tetratricopeptide repeat (TPR)d2fbna12fbn0.72899
a.118.8.1: Tetratricopeptide repeat (TPR)d1nzna11nzn0.72431
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domainsd3txna13txn0.71884


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00196GerE 88.18
PF08238Sel1 9.09
PF02954HTH_8 2.73



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.18 %
UnclassifiedrootN/A1.82 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_16579228All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300001546|JGI12659J15293_10050142All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis957Open in IMG/M
3300003693|Ga0032354_1058514All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300004092|Ga0062389_101636527All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter826Open in IMG/M
3300004102|Ga0058888_1419518All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter649Open in IMG/M
3300004473|Ga0068919_1426017All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter800Open in IMG/M
3300004620|Ga0068957_1411414All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter762Open in IMG/M
3300004631|Ga0058899_12142190All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300004633|Ga0066395_10458812All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter728Open in IMG/M
3300004635|Ga0062388_100632162All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter987Open in IMG/M
3300005167|Ga0066672_10071647All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2050Open in IMG/M
3300005176|Ga0066679_10877773All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter566Open in IMG/M
3300005179|Ga0066684_10969888All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter551Open in IMG/M
3300005435|Ga0070714_102018434All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter562Open in IMG/M
3300005437|Ga0070710_10039053All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2611Open in IMG/M
3300005538|Ga0070731_11094255All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter527Open in IMG/M
3300005542|Ga0070732_10241773All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1080Open in IMG/M
3300006028|Ga0070717_10224102All Organisms → cellular organisms → Bacteria1653Open in IMG/M
3300006032|Ga0066696_10301535All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300006052|Ga0075029_100050105All Organisms → cellular organisms → Bacteria2416Open in IMG/M
3300006059|Ga0075017_101124425All Organisms → cellular organisms → Bacteria → Proteobacteria614Open in IMG/M
3300006102|Ga0075015_100524641All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300006800|Ga0066660_10573663All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium945Open in IMG/M
3300010358|Ga0126370_10149142All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1702Open in IMG/M
3300011120|Ga0150983_13981965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium776Open in IMG/M
3300011120|Ga0150983_15071693All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300011270|Ga0137391_11512454All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300012212|Ga0150985_110940167All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300012469|Ga0150984_101634725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium753Open in IMG/M
3300012469|Ga0150984_102187265All Organisms → cellular organisms → Bacteria → Acidobacteria842Open in IMG/M
3300012469|Ga0150984_111850317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300012925|Ga0137419_11003062All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300014168|Ga0181534_10390004All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300015356|Ga0134073_10216397All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300016270|Ga0182036_11794723All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300016371|Ga0182034_10917509All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium754Open in IMG/M
3300016404|Ga0182037_10789627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium818Open in IMG/M
3300017823|Ga0187818_10553191All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300017924|Ga0187820_1168967All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium668Open in IMG/M
3300017972|Ga0187781_11183768All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300018006|Ga0187804_10090498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1247Open in IMG/M
3300018086|Ga0187769_11067273All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300018468|Ga0066662_11325063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium740Open in IMG/M
3300019240|Ga0181510_1032910All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300019258|Ga0181504_1549335All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis798Open in IMG/M
3300019278|Ga0187800_1264471All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium737Open in IMG/M
3300019284|Ga0187797_1188213All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium713Open in IMG/M
3300020580|Ga0210403_10256016All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1436Open in IMG/M
3300020580|Ga0210403_10479117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1012Open in IMG/M
3300021405|Ga0210387_11876491All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300021476|Ga0187846_10084533All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1375Open in IMG/M
3300021560|Ga0126371_10728580All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1139Open in IMG/M
3300021861|Ga0213853_10235736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium921Open in IMG/M
3300022501|Ga0242645_1013829All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300022502|Ga0242646_1009780All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300022504|Ga0242642_1030038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300022505|Ga0242647_1011904All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium791Open in IMG/M
3300022505|Ga0242647_1030643All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300022506|Ga0242648_1027432All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium771Open in IMG/M
3300022506|Ga0242648_1030111All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium748Open in IMG/M
3300022506|Ga0242648_1034109All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300022506|Ga0242648_1073727All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300022507|Ga0222729_1020239All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300022509|Ga0242649_1020518All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300022509|Ga0242649_1033092All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300022510|Ga0242652_1013704All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300022530|Ga0242658_1076581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium761Open in IMG/M
3300022530|Ga0242658_1079964All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300022532|Ga0242655_10061794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium950Open in IMG/M
3300022708|Ga0242670_1020458All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300022708|Ga0242670_1041201All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300022718|Ga0242675_1035572All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300022721|Ga0242666_1106578All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300022721|Ga0242666_1201419All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300022722|Ga0242657_1078095All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300022722|Ga0242657_1084849All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium758Open in IMG/M
3300022722|Ga0242657_1085589All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium755Open in IMG/M
3300022724|Ga0242665_10029063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1344Open in IMG/M
3300022724|Ga0242665_10112727All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium821Open in IMG/M
3300022724|Ga0242665_10134638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300027548|Ga0209523_1007822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1902Open in IMG/M
3300027652|Ga0209007_1098258All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium735Open in IMG/M
3300027898|Ga0209067_10067352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1833Open in IMG/M
3300030399|Ga0311353_11510838All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300030578|Ga0210275_10120867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300030582|Ga0210261_1088721All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300030626|Ga0210291_10473085All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium853Open in IMG/M
3300030743|Ga0265461_11278624All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300030939|Ga0138303_1374193All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300030967|Ga0075399_10008141All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium729Open in IMG/M
3300030967|Ga0075399_11473550All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300030993|Ga0308190_1054943All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300031093|Ga0308197_10184475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300031122|Ga0170822_16425374All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium749Open in IMG/M
3300031231|Ga0170824_100908578All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1005Open in IMG/M
3300031231|Ga0170824_114266705All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300031231|Ga0170824_128016622All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300031344|Ga0265316_10104367All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2151Open in IMG/M
3300031474|Ga0170818_110615042All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300031716|Ga0310813_11337260All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300031719|Ga0306917_11204383All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300031866|Ga0316049_107899All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis740Open in IMG/M
3300032074|Ga0308173_10986915All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300032180|Ga0307471_103359109All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300032515|Ga0348332_12182343All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300032828|Ga0335080_12157816All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300033158|Ga0335077_10942683All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300034644|Ga0370548_039342All Organisms → cellular organisms → Bacteria807Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil33.64%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.55%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.55%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.64%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.64%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.64%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.73%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.82%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.82%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.82%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.82%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.82%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.91%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.91%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.91%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.91%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.91%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.91%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300003693Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004102Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004473Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004620Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019240Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022501Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022502Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030578Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030582Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030626Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030939Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030967Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031866Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_007516802088090014SoilEAAKWLWKSIAKHNGPAMLVLADLYLKGDGVSKNCDQARVLLDSAALRGMAGAGARLRNLRAFGCQ
JGI12269J14319_1003471053300001356Peatlands SoilKQNTDATLLLSDIYLKGDGIPKNCDQARLLLDAAARKGIKDAAGRLRQLQDSDCE*
JGI12659J15293_1005014213300001546Forest SoilSQGRDSAEAAKWLWKSIAKHNSAATVLLADLYLKGDGVSKNCDQARVLLDSAARKGFPPAGERLRNLQAFGCQ*
Ga0032354_105851423300003693Avena Fatua RhizosphereAEARRYLAARDGADAQKWLWKSIAKHNGEATVLLADLYLKGDGVSKNCDQARVLLDSAARKGVAGAGERLRNLQAFGCQ*
Ga0062389_10163652733300004092Bog Forest SoilKHNARAPLLLADLYMKGEGVSKNCDQARVLLDSATRAGVKDAAERLRHLQAFGCQ*
Ga0058888_141951823300004102Forest SoilGSASVLLADLYLKGDGVPKNCDQARILLDSAALRGTKDAGERLRHLQAFGCN*
Ga0068919_142601713300004473Peatlands SoilAEAAKWLWKSMAKHNSSATLLLADLYLKGDGVSKNCDQARVLLDSAARGGMKQAGERLRHLQAFGCE*
Ga0068957_141141433300004620Peatlands SoilLWKAMGKHNGNATVLLADLYLKGEGVPKNCDQARILLDSAALRGMKDAGERLRHLQAFGCN*
Ga0058899_1214219013300004631Forest SoilKWLWKSMAKHNSSATLLLADLYLKGDGVSKNCDQARVLLDSAARGGMKQAGERLRHLQAFGCE*
Ga0066395_1045881213300004633Tropical Forest SoilMGKHNGPATLILADLYLKGDGVSKNCEQARVLLDSAAIRGMKGAGERLRNLQAFGCQ*
Ga0062388_10063216213300004635Bog Forest SoilELLWKAVSKQNAEATDLLSDLYLKGDGVPKNCDQARVLLDVAASKGRKDAAERLGHLEAFGCQ*
Ga0066672_1007164713300005167SoilIAKHNGPAMLELADLYLKGDGVAKSCDQARVLLDSAARRGMSGAGARLRNLQAFGCQ*
Ga0066679_1087777323300005176SoilLAAAQSYLNRADDQRNRAEAAKWLWKSVAKHNPEATLLLADLYLKGQGVGKNCDQARVLLDAAARKGMKDAGQRLRHLQAFGCE*
Ga0066684_1096988813300005179SoilKWLWKSIAKHNGQATLLLADLYLKGDGVSKNCDQARVLLDSAARKGISGAGERLRNLQAFGCQ*
Ga0070714_10201843423300005435Agricultural SoilTAEAAKWLWKSIAKHNGQATLLLADLYLKGNGVPKNCDQARILLDSAARKGISGAGERLRNLPAFGCQ*
Ga0070710_1003905333300005437Corn, Switchgrass And Miscanthus RhizosphereEAAKWLWRAMGKHNGPATLILADLYLKGDGVTKNCDQARVLLDSAARRGMEGAGARLRNLQAFGCQ*
Ga0070731_1109425523300005538Surface SoilIAKHNAEASLLLSDLYLKGEGVSKNCDQARVLLDAAALRGVKDAGVRLRHLQAFGCQ*
Ga0070732_1024177313300005542Surface SoilEASLLLSDLYLKGEGVSKNCDQARVLLDSAALRGVKDAGTRLRHLQAFGCQ*
Ga0070717_1022410243300006028Corn, Switchgrass And Miscanthus RhizosphereLNGANGQRRDTAEAAKWLWKSIAKHNGQATLLLADLYLKGNGVPKNCDQARILLDSAARKGISGAGERLRNLPAFGCQ*
Ga0066696_1030153513300006032SoilTSEAAKWLWKSVSKHNSAALVVLADLYTRGDGVAKSCDQAQVLLVAAAKKGSAEAGQRLRNLQSSGCK*
Ga0075029_10005010543300006052WatershedsEAAKWLWKSMAKHNADATLLLADLYLKGDGVSKNCDQARVLLDSAALRGMKVAGERLRHLQAFGCE*
Ga0075017_10112442513300006059WatershedsMAQRLLHGSSGQARDSAEAAKLLWKSIAKHNGPALLELADLYLKGDGVSKNCDQARVLLDSAARRGMAGAGEKLRNLQAFGCQ*
Ga0075015_10052464113300006102WatershedsHNANATLLLADLYLKGDGVSKNCDQARVLLDSAARSGMKGAGDRLRHLQSFGCE*
Ga0066660_1057366313300006800SoilKWLWKSIAKHNGQATLLLADLYLKGNGVPKNCDQARILLDSAARKGISGAGERLRNLPAFGCQ*
Ga0116221_147443913300009523Peatlands SoilAVAKQNTDATLLLSDIYLKGDGIPKNCDQARLLLDAAARKGIKDAAGRLRQLQESDCE*
Ga0126370_1014914213300010358Tropical Forest SoilTNGRRQNSAEAAKHLWDAVSKHNGPAMVALADLYLKGNGVSKNCDQARVLLDSAALRGVAGAGQRLRNLQAFGCQ*
Ga0150983_1398196533300011120Forest SoilAKHNAKAPLFLADLYLKGEGVSKNCDQARVLLDSATRAGVKDAAERLRHLQAFGCQ*
Ga0150983_1507169313300011120Forest SoilLWKSMAKHNASATLLLADLYLKGDGVAKNCDQARVLLDSAALRGVKEAGERLRHLQAFGCN*
Ga0137391_1151245413300011270Vadose Zone SoilSAEAAKWLWKSISKHNGEATVMLADLYLKGDGVSKNCDQARVLLDTAGRKGVAGAGERLRNLRAFGCQ*
Ga0150985_11094016713300012212Avena Fatua RhizosphereWKSIAKHNGQATLLLADLYLKGDGVSKNCDQARVLLDSAARKGISGAGERLRNLQAFGCQ
Ga0150984_10163472523300012469Avena Fatua RhizosphereWKSIAKHNSQATILLADLYLKGDGVSKNCDQARVLLDSAARKGIAAAGERLRNLQAFGCQ
Ga0150984_10218726533300012469Avena Fatua RhizosphereVAQRYLNGASGQHRDTSEAAKWLWKSIAKHNGQATLLLADLYLKGDGVSKNCDQARVLLDSAARKGISGAGERLRNLQAFGCQ*
Ga0150984_11185031713300012469Avena Fatua RhizosphereAQARHWLQAHDGPEAEKWLWKSIAKHNGEATVLLADLYLKGDGVSKNCDQARVLLDSAARKGVPGAGERLRNLPAFGCQ*
Ga0137419_1100306213300012925Vadose Zone SoilQYLNGSNGQPRNGAEGAKWLWRAIAKHNSAASLLLADLYLKGDGVSKNCDQARVLLDAAAIKGMKGAGTRLRNLQSFGCD*
Ga0181534_1039000413300014168BogEAAKWLWKSMAKHNATATLLLADLYLKGDGVAKNCDQARVLLDSAALRGLKEAGERLQSLQAFGCQ*
Ga0134073_1021639723300015356Grasslands SoilGQRRDTAEGAKWLWKSIAKHNGQATLLLADLYLKGNGVPKNCDQARILLDSAARKGISGAGERLRNLPAFGCQ*
Ga0182036_1179472313300016270SoilAKWLWKSMGKHYGPAMVALADLYLKGDGVSKNCDQARVLLDSAALRGVAGAGQRLRNLQAFGCQ
Ga0182034_1091750913300016371SoilAAKHLWDAVSKHNGPAMVALADLYLKGNGVSKNCDQARVLLDSAALRGVAGAGQRLRNLQAFGCQ
Ga0182037_1078962713300016404SoilSMVALADLYLKGDGVSKNCDQARVLLDSAAQRGMAGAGERLRNLQAFGCQQIVPGTAR
Ga0187818_1055319113300017823Freshwater SedimentGVQRNSGEAAQWLWKSIAKHNSEATILLADLYLKGDGVAKNCDQARVLLDSAARKGVSGAGERLRNLQAFGCQ
Ga0187820_116896713300017924Freshwater SedimentHNGPAMLVLADLYLKGDGVSKNCDQARVLLDSAARQGMAGAAERLRNLQAFGCQ
Ga0187781_1118376823300017972Tropical PeatlandWLWKSVEKRNTEATLLLAELYLRGNGVPKNCDQARVLLDAAVSKGVPGAGERLRNLQAFGCQ
Ga0187804_1009049813300018006Freshwater SedimentIAKHNGPAMLELADLYLKGDGVSKNCDQARVLLDSAARQGMAGAAERLRNLQAFGCQ
Ga0187769_1106727323300018086Tropical PeatlandKTHDSVKAANWLWQAVAKQNTEATELLADLYLNGEGVPKNCEQARILLGAAAHKGAQEAAERLRHLQDFGCQ
Ga0066662_1132506333300018468Grasslands SoilIAKHNGQATLLLADLYLKGDGVSKNCDQARVLLDSAARKGISGAGERLRNLQAFGCQ
Ga0181510_103291013300019240PeatlandKAIAKHNGEATLLLADLYLKGDGVAKNCDQAHILLDAAAVRSVPGAAERLRNLQAFGCS
Ga0181504_154933533300019258PeatlandLVTAEKYLNRGPGRNSGEAATLLWKAVSKGNVAATVTLSDLYLHGDGVPKNCDQAHLLLIAAARKGAKGAAERLRNLQAFGCR
Ga0187800_126447113300019278PeatlandWLWKSVAKHNDKAILLLADLYLKGDGVSKNCEQARVLLDSAARKGTSGAAERLRNLAAFGCQ
Ga0187797_118821333300019284PeatlandVAKKNAEATLLLADLYLKGNGVPKNCDQARVLLDAAASKGVPGALDRLRNLQAFGCQ
Ga0210403_1025601633300020580SoilHNADATILLSEMYLKGDGVSKNCDQARVLLDSATLRGVKGAGERLRHLQAFGCQ
Ga0210403_1047911713300020580SoilAATWLWKSIAKHNGPAMLELADLYLKGDGVSKNCDQARVLLDSAARRGMAGAGERLRNLQAFGCQ
Ga0210387_1187649123300021405SoilGKHNGSASVLLADLYLKGDGVPKNCDQARILLDSAALRGTKDAGERLRHLQAFGCN
Ga0187846_1008453333300021476BiofilmHNGPALLVLADLYLKGEGVIKNCDQARVLLDSAAQRRLVAAGERLRNLQAFGCQ
Ga0126371_1072858023300021560Tropical Forest SoilWKSMGKHYGPAMVALADLYLKGDGVPKNCDQARVLLDSAALRGVAGAGQRLRNLQAFGCQ
Ga0213853_1023573613300021861WatershedsQRLLHGSSGQARDSAEAAKLLWRSIAKHNGPAMLELADLYLKGDGVSKNCDQARVLLDSAARRGMAGAGEKLRNLQAFGCQ
Ga0242645_101382913300022501SoilIAKHNADATLLLSDLYLKGDGVEKNCDQARVLLDAAAVRGMKGAGERLRHLQAFGCQ
Ga0242646_100978033300022502SoilGRDSAEAAKWLWKSIAKHNSAATVLLADLYLKGDGVSKNCDQARVLLDSAARKGFPPAGERLRNLQAFGCQ
Ga0242642_103003823300022504SoilNGQQRNSAEAAKWLWKSMAKHNSSATLLLADLYLKGDGVSKNCDQARVLLDSAARGGMKQAGERLRHLQAFGCE
Ga0242647_101190433300022505SoilDSAEAAKWLWKSIAKHNSAATVLLADLYLKGDGVSKNCDQARVLLDSAARKGFPPAGERLRNLQAFGCQ
Ga0242647_103064313300022505SoilHNGSASVLLADLYLKGDGVPKNCDQARILLDSAALRGTKDAGERLRHLQAFGCN
Ga0242648_102743213300022506SoilIGKHNADATILLSEMYLKGDGVSKNSDQARVLLDSATLRGVKGAGQRLRHLQAFGCP
Ga0242648_103011113300022506SoilTLLLADLYLKGEGVSKNCDQARVLLDSATRGGMKEAGERLRHLQAFGCQ
Ga0242648_103410933300022506SoilWKAIAKHNADATLLLSDLYLKGDGVPKNCDQARVLLDAAAVRGMKGAGDRLRHLQAFGCQ
Ga0242648_107372713300022506SoilSQGRDSAEAAKWLWKSIAKHNSAATVLLADLYLKGDGVSKNCDQARVLLDSAARKGFPPAGERLRNLQAFGCQ
Ga0222729_102023913300022507SoilWLWRAIGKHNADATILLSEMYLKGDGVSKNCDQARVLLDSATLRGVKGAGQRLRHLQAFGCP
Ga0242649_102051823300022509SoilGKHNAQATLLLADLYLKGEGVSKNCDQARVLLDSATRGGMKEAGERLRHLQAFGCQ
Ga0242649_103309233300022509SoilAKHNADATLLLSDLYLKGDGVEKNCDQARVLLDAAAGRGLRGAGERLRNLQAFGCQ
Ga0242652_101370423300022510SoilATAQRFLRGSTGQTRDTAQAATWLWKSIAKHNGPAMLELADLYLKGDGVSKNCDQARVLLDSAARRGMAGAGERLRNLQAFGCQ
Ga0242658_107658113300022530SoilATLLLADLYLKGEGVSKNCDQARVLLDSATRGGMKEAGERLRHLQAFGCQ
Ga0242658_107996433300022530SoilLWKAMGKHNGSASVLLADLYLKGDGVPKNCDQARILLDSAALRGTKDAGERLRHLQAFGC
Ga0242655_1006179413300022532SoilKHNAQATLLLADLYLKGEGVSKNCDQARVLLDSATRGGMKEAGERLRHLQAFGCQ
Ga0242670_102045823300022708SoilKWLWKSMAKHNSSATLLLADLYLKGDGVSKNCDQARVLLDSAARGGMKQAGERLRHLQAFGCE
Ga0242670_104120133300022708SoilWKSIAKHNSAATVLLADLYLKGDGVSKNCDQARVLLDSAARKGFPPAGERLRNLQAFGCQ
Ga0242675_103557223300022718SoilRNSAEAAKWLWRAIGKHNADATILLSEMYLKGDGVSKNCDQARVLLDSATLRGVKGAGQRLRHLQAFGCP
Ga0242666_110657833300022721SoilWKAIAKHNGQAALLLSDLYLKGEGVAKNCDQARVLLDAAALKGVQGAAERLRHLQAFGCS
Ga0242666_120141923300022721SoilADATLLLSDLYLKGDGVEKNCDQARVLLDAAAVRGMKGAGERLRHLQAFGCQ
Ga0242657_107809523300022722SoilLWKAIAKHNAKATLLLSDLYLKGDGVAKNCDQARVLLDAAARKGQGTKDAADRLRHLQAFGCE
Ga0242657_108484933300022722SoilAKWLWKSIAKHNSAATVLLADLYLKGDGVSKNCDQARVLLDSAARKGFPPAGERLRNLQAFGCQ
Ga0242657_108558933300022722SoilWKAMAKHNAKAPLLLADLYLKGEGVSKNCDQARVLLDSATRAGVKDAAERLRHLQAFGCQ
Ga0242665_1002906313300022724SoilKHNGSASVLLADLYLKGDGVPKNCDQARILLDSAALRGTKDAGERLRHLQAFGCN
Ga0242665_1011272713300022724SoilTNGHSRNSAEAAKWLWRAIGKHNADATILLSEMYLKGDGVSKNCDQARVLLDSATLRGVKGAGQRLRHLQAFGCP
Ga0242665_1013463833300022724SoilWKAMAKHNTRSMLLLADLYMKGDGVSKNCDQAHVLLDSAARGGVKEAGERLRHLQAFGCQ
Ga0209523_100782233300027548Forest SoilWKSIAKHNGPATLELADLYLKGDGVPKNCDQARVLLDSAARRGMTGAGERLRNLQAFGCQ
Ga0209007_109825823300027652Forest SoilIAKHNADATFLLSEMYLKGDGVSKNCDQARVLLDSATLKGVKGAGERLRHLQAFGCQ
Ga0209067_1006735233300027898WatershedsEAVKWLWKSIAKHNGPAMQVLADLYLKGDGVSKNCDQARVLLDSAARRGMAGAGEKLRNLQAFGCQ
Ga0311353_1151083823300030399PalsaKAMGKGNVAAMMALADLYLKGDGVTKSCDQAHVLLDAAARKGSRAAAERLRHLQAFGCE
Ga0210275_1012086723300030578SoilANATFLLSEMYLKGDGVSKNCDQARVLLDTATLKGVKGAGERLRHLQAFGCQ
Ga0210261_108872113300030582SoilIAKHNADATLLLSDLYLKGDGVEKNCDQARVLLDAAAGRGMKGAGDRLRHLQAFGCQ
Ga0210291_1047308513300030626SoilKHNATATLLLADLYLKGEGVSKNCDQARVLLDSAGRAGMKEAGERLRHLQAFGCQ
Ga0265461_1127862423300030743SoilAVGKHNSEATILLSDLYLKGEGVGKNCDQARVLLDTATLKGVKGAGERLRHLQAFGCQ
Ga0138303_137419313300030939SoilIAKHNAPAMLTLADLYLKGNGVPKNCDQARVLLDSAARRGMVGAGERLRNLPAFGCQ
Ga0075399_1000814123300030967SoilNADATLLLADLYLKGQGVGKNCDQARVLLDAAARKGMKDAGQRLRHLQAFGCE
Ga0075399_1147355023300030967SoilEAAKWLWKSIAKHNGPAMLELADLYLKGDGVAKSCDQARVLLDSAARRGMSGAGARLRNLQAFGCQ
Ga0308190_105494323300030993SoilHDSAEAAKWLWKSIAKHNSQATILLADLYLKGDGVSKNCDQARVLLDSAARKGIAAAGERLRNLQAFGCQ
Ga0308197_1018447513300031093SoilIAKHNSQATILLADLYLKGDGVSKNCDQARVLLDSAARKGIAAAGERLRNLQAFGCQ
Ga0170822_1642537423300031122Forest SoilAKHNGPAMLELADLYLKGDGVAKSCDQARVLLDSAARRGMSGAGARLRNLQAFGCQ
Ga0170824_10090857813300031231Forest SoilAEAAKWLWKSMAKHNSSATLLLADLYLKGDGVSKNCDQARVLLDSAARSGMKQAGERLRHLQAFGCE
Ga0170824_11426670513300031231Forest SoilFFPLKAVAKHNAGATLLLSDLYLKGDGVRKNCDQARVLLDAAARKGVKDAGDRLRHLQAFGCD
Ga0170824_12801662213300031231Forest SoilKWLWKSVAKQNADATLVLSDLYLKGDGVGKSCDQARLLLDSAARKGMKQAGDRLRHLDAFGCQ
Ga0265316_1010436743300031344RhizosphereKWLWMAVSKRNANATLRLSDLYLKGDGIPKNCDQARVLLDAAASNGVKVAAERLRHLQAFGCE
Ga0170818_11061504223300031474Forest SoilADATLLLADLYLKGQGVGKNCDQARILLDAAARKGMKDAGDRLRHLPAFGCD
Ga0310813_1133726023300031716SoilAEAAKWLWKSIAKHNSEATLLLADLYLKGDGVSKNCDQARVLLDSAARKGMAGAGERLRNLQAFGCQ
Ga0306917_1120438323300031719SoilRQDSAEAAKHLWDAVSKHNGPAMVALADLYLKGNGVSKNCDQARVLLDSAALRGVAGAGQRLRNLQAFGCQ
Ga0316049_10789923300031866SoilWKAIAKHNGEASLLLSDLYLKGDGVGKNCDQARVLLDAAAVRGVPGAADRLRHLQAFGCS
Ga0308173_1098691533300032074SoilGQGRDTSEAAKWLWKSIAKHNGQATLLLADLYLKGNGVPKNCDQARILLDSAARKGISGAGERLRNLPAFGCQ
Ga0307471_10335910923300032180Hardwood Forest SoilAAKWLWKSVAKHNAQATVLLADLYLKGNGVSKNCDQARVLLDSAARKGVAGAGERLRNLPAFGCQ
Ga0348332_1218234313300032515Plant LitterGKHNGNATVLLADLYLKGEGVPKNCDQARILLDSAALRGMKDAGERLRHLPAFGCN
Ga0335080_1215781623300032828SoilLWKSVAKHNGAATILLADLFLKGDGVSKNCEQARLLLDAAASRGLVGAGERLRNLQAFGC
Ga0335077_1094268313300033158SoilLAEAQRYLGAHDNANAAQWLWKSIAKHNGQATVMLADLYLKGEGVSKNCDQARVLLDSAARKGVSGAGERLRNLQAFGCQ
Ga0370548_039342_572_8053300034644SoilTGTNRQGRDTSEAAKWLWKSIAKHNSEATVLLADLYLKGDGVSKNCDQARVLLDSAARKGISAAGERLRNLQAFGCQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.