NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F086838

Metagenome / Metatranscriptome Family F086838

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086838
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 47 residues
Representative Sequence MQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Number of Associated Samples 77
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.00 %
% of genes near scaffold ends (potentially truncated) 31.82 %
% of genes from short scaffolds (< 2000 bps) 70.91 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (52.727 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(31.818 % of family members)
Environment Ontology (ENVO) Unclassified
(68.182 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(75.455 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.96%    β-sheet: 0.00%    Coil/Unstructured: 61.04%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13884Peptidase_S74 19.09
PF05838Glyco_hydro_108 12.73
PF09374PG_binding_3 6.36
PF11351GTA_holin_3TM 5.45
PF07750GcrA 2.73
PF08291Peptidase_M15_3 0.91
PF00959Phage_lysozyme 0.91
PF01507PAPS_reduct 0.91
PF03237Terminase_6N 0.91
PF13649Methyltransf_25 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG3926Lysozyme family proteinGeneral function prediction only [R] 12.73
COG5352Uncharacterized conserved proteinFunction unknown [S] 2.73


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.73 %
All OrganismsrootAll Organisms47.27 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002408|B570J29032_109009698Not Available565Open in IMG/M
3300002835|B570J40625_100488956Not Available1161Open in IMG/M
3300003393|JGI25909J50240_1026090Not Available1310Open in IMG/M
3300004776|Ga0007800_10066353Not Available868Open in IMG/M
3300005583|Ga0049085_10098806All Organisms → Viruses → Predicted Viral1009Open in IMG/M
3300005584|Ga0049082_10222542Not Available642Open in IMG/M
3300006802|Ga0070749_10272199All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300006802|Ga0070749_10527119All Organisms → cellular organisms → Bacteria → Proteobacteria642Open in IMG/M
3300007559|Ga0102828_1144132All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage595Open in IMG/M
3300007708|Ga0102859_1147619Not Available689Open in IMG/M
3300009026|Ga0102829_1148833Not Available748Open in IMG/M
3300009068|Ga0114973_10050410Not Available2460Open in IMG/M
3300009151|Ga0114962_10005412Not Available9989Open in IMG/M
3300009151|Ga0114962_10007299Not Available8405Open in IMG/M
3300009151|Ga0114962_10263200All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage978Open in IMG/M
3300009152|Ga0114980_10046471Not Available2641Open in IMG/M
3300009154|Ga0114963_10075427All Organisms → Viruses → Predicted Viral2099Open in IMG/M
3300009155|Ga0114968_10191085All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1192Open in IMG/M
3300009155|Ga0114968_10456626All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage691Open in IMG/M
3300009155|Ga0114968_10674789Not Available542Open in IMG/M
3300009158|Ga0114977_10007919All Organisms → cellular organisms → Bacteria → Proteobacteria6746Open in IMG/M
3300009159|Ga0114978_10454604Not Available758Open in IMG/M
3300009161|Ga0114966_10006500All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage9746Open in IMG/M
3300009161|Ga0114966_10312432All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage947Open in IMG/M
3300009181|Ga0114969_10020260All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4700Open in IMG/M
3300009181|Ga0114969_10022001All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4485Open in IMG/M
3300009181|Ga0114969_10386132Not Available805Open in IMG/M
3300009181|Ga0114969_10696782Not Available547Open in IMG/M
3300009181|Ga0114969_10789304Not Available504Open in IMG/M
3300009184|Ga0114976_10126303All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1445Open in IMG/M
3300009218|Ga0103848_1015396All Organisms → cellular organisms → Bacteria1393Open in IMG/M
3300009233|Ga0103856_10106142Not Available536Open in IMG/M
3300010160|Ga0114967_10068057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2164Open in IMG/M
3300010885|Ga0133913_10439325All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3445Open in IMG/M
3300010885|Ga0133913_11145354All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1999Open in IMG/M
3300011010|Ga0139557_1013447Not Available1569Open in IMG/M
3300012013|Ga0153805_1083978Not Available540Open in IMG/M
3300013094|Ga0164297_10065349Not Available1672Open in IMG/M
3300015050|Ga0181338_1005851Not Available2078Open in IMG/M
3300015050|Ga0181338_1006832All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1919Open in IMG/M
3300015050|Ga0181338_1012712All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1363Open in IMG/M
3300017700|Ga0181339_1035997Not Available540Open in IMG/M
3300017700|Ga0181339_1036385All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage537Open in IMG/M
3300017716|Ga0181350_1012961Not Available2364Open in IMG/M
3300017716|Ga0181350_1023300All Organisms → cellular organisms → Bacteria1726Open in IMG/M
3300017747|Ga0181352_1015879Not Available2377Open in IMG/M
3300017754|Ga0181344_1032463Not Available1593Open in IMG/M
3300017761|Ga0181356_1076509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae1116Open in IMG/M
3300017761|Ga0181356_1248839Not Available507Open in IMG/M
3300017777|Ga0181357_1041113Not Available1816Open in IMG/M
3300017778|Ga0181349_1199768Not Available691Open in IMG/M
3300017778|Ga0181349_1242171Not Available605Open in IMG/M
3300017780|Ga0181346_1077086Not Available1318Open in IMG/M
3300017780|Ga0181346_1113084All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1045Open in IMG/M
3300017784|Ga0181348_1005596All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5537Open in IMG/M
3300017784|Ga0181348_1219588Not Available671Open in IMG/M
3300017785|Ga0181355_1129801Not Available1027Open in IMG/M
3300018416|Ga0181553_10096674All Organisms → Viruses → Predicted Viral1832Open in IMG/M
3300019784|Ga0181359_1001763Not Available6009Open in IMG/M
3300019784|Ga0181359_1083068Not Available1198Open in IMG/M
3300020506|Ga0208091_1016539All Organisms → cellular organisms → Bacteria → Proteobacteria878Open in IMG/M
3300020549|Ga0207942_1040447Not Available579Open in IMG/M
3300021519|Ga0194048_10022491All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2719Open in IMG/M
3300021519|Ga0194048_10030612All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2265Open in IMG/M
3300021519|Ga0194048_10067514Not Available1412Open in IMG/M
3300021519|Ga0194048_10177565Not Available793Open in IMG/M
3300021519|Ga0194048_10219710All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage698Open in IMG/M
3300021602|Ga0194060_10151335Not Available1230Open in IMG/M
3300021961|Ga0222714_10014199Not Available6568Open in IMG/M
3300021962|Ga0222713_10102331Not Available2051Open in IMG/M
3300021963|Ga0222712_10098402All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2052Open in IMG/M
3300022179|Ga0181353_1101306All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage708Open in IMG/M
3300022190|Ga0181354_1013067Not Available2503Open in IMG/M
3300022190|Ga0181354_1054694Not Available1328Open in IMG/M
3300022190|Ga0181354_1102378Not Available932Open in IMG/M
3300022407|Ga0181351_1046389Not Available1825Open in IMG/M
3300023179|Ga0214923_10087860All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2153Open in IMG/M
3300023184|Ga0214919_10297179All Organisms → Viruses → Predicted Viral1117Open in IMG/M
3300024346|Ga0244775_11228967All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage583Open in IMG/M
3300027586|Ga0208966_1043631All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1291Open in IMG/M
3300027708|Ga0209188_1043755All Organisms → Viruses → Predicted Viral2032Open in IMG/M
3300027733|Ga0209297_1070790All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1539Open in IMG/M
3300027749|Ga0209084_1034795All Organisms → cellular organisms → Bacteria2553Open in IMG/M
3300027749|Ga0209084_1349234All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300027754|Ga0209596_1007733All Organisms → cellular organisms → Bacteria → Proteobacteria7534Open in IMG/M
3300027754|Ga0209596_1009712All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6493Open in IMG/M
3300027754|Ga0209596_1026941Not Available3319Open in IMG/M
3300027754|Ga0209596_1028041All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3231Open in IMG/M
3300027754|Ga0209596_1034580All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2803Open in IMG/M
3300027763|Ga0209088_10000724Not Available22584Open in IMG/M
3300027782|Ga0209500_10394867Not Available558Open in IMG/M
3300027785|Ga0209246_10089084Not Available1206Open in IMG/M
3300027785|Ga0209246_10363589All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage548Open in IMG/M
3300027963|Ga0209400_1178400All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage899Open in IMG/M
3300028392|Ga0304729_1044012All Organisms → Viruses → Predicted Viral1715Open in IMG/M
3300031707|Ga0315291_11520443Not Available526Open in IMG/M
3300031772|Ga0315288_11710077Not Available507Open in IMG/M
3300031952|Ga0315294_10491580Not Available1125Open in IMG/M
3300031999|Ga0315274_10733848All Organisms → cellular organisms → Bacteria → Proteobacteria1061Open in IMG/M
3300031999|Ga0315274_11118737Not Available790Open in IMG/M
3300032053|Ga0315284_11884115All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage612Open in IMG/M
3300032118|Ga0315277_11592651All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage554Open in IMG/M
3300032173|Ga0315268_11793952Not Available627Open in IMG/M
3300032177|Ga0315276_11635366Not Available667Open in IMG/M
3300032397|Ga0315287_12443647Not Available563Open in IMG/M
3300032562|Ga0316226_1209147Not Available805Open in IMG/M
3300032605|Ga0316232_1213183Not Available768Open in IMG/M
3300033233|Ga0334722_10307778All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1154Open in IMG/M
3300034082|Ga0335020_0042423Not Available2432Open in IMG/M
3300034356|Ga0335048_0359172All Organisms → cellular organisms → Bacteria → Proteobacteria735Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake31.82%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake26.36%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.00%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater5.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater4.55%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.73%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.73%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.73%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater1.82%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater1.82%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water1.82%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.82%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.91%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.91%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300004776Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14MEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300009026Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300009218Microbial communities of water from Amazon river, Brazil - RCM1EnvironmentalOpen in IMG/M
3300009233Microbial communities of water from Amazon river, Brazil - RCM9EnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300013094Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaGEnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017700Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.DEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020549Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300021602Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5mEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028392Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032562Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017EnvironmentalOpen in IMG/M
3300032605Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
B570J29032_10900969833300002408FreshwaterQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
B570J40625_10048895633300002835FreshwaterMTLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
JGI25909J50240_102609013300003393Freshwater LakeMHLDLTIDQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAAEKAPPE*
Ga0007800_1006635323300004776FreshwaterMQLDLTIDQINVIMQALGNAPFVQVEGLINEIRKQVQPQLAPKEA
Ga0049085_1009880633300005583Freshwater LenticMRLELTIDQINLIMSALGNAPFVQVEGIINEIRKQVQPQLAPPPTPEAA*
Ga0049082_1022254223300005584Freshwater LenticMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0070749_1027219943300006802AqueousDLTIDQINVIMSALGNAPFIQVEGIINEIHKQVQPQLAPEKAPPE*
Ga0070749_1052711933300006802AqueousMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0102828_114413223300007559EstuarineMHLDLTIDQINLIMSALGNAPFIQVEAVINEIRKQVQPQLAPEKAPPE*
Ga0102859_114761943300007708EstuarineTLERLMRLELTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE*
Ga0102829_114883333300009026EstuarineMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE*
Ga0114973_1005041033300009068Freshwater LakeMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0114962_1000541283300009151Freshwater LakeMNLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPQEAPPT*
Ga0114962_1000729983300009151Freshwater LakeMHLDLTIEQINVIMQALGNAPFVQVEGIVNEIRKQVQPQLAPQEAPPT*
Ga0114962_1026320023300009151Freshwater LakeMQLDLTIDQINVIMAALGNAPFVQVEGLINEIRKQVQPQLAQQEAPPT*
Ga0114980_1004647143300009152Freshwater LakeMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPKDTPPE*
Ga0114963_1007542773300009154Freshwater LakeMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPQEAPPT*
Ga0114968_1019108523300009155Freshwater LakeMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0114968_1045662613300009155Freshwater LakePATTLERLMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE*
Ga0114968_1067478913300009155Freshwater LakeMHLDLTLDQINLILAALGNAPFVQVEAVINEIRKQAQRQLTPEPTTES*
Ga0114977_1000791953300009158Freshwater LakeMQLDLTLEQINVIMSALGNAPFVQVEGIINEIRKQAQPQINPAPETP*
Ga0114978_1045460433300009159Freshwater LakeMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAPEAPPE*
Ga0114966_1000650033300009161Freshwater LakeMQLDLTLEQINVIMASLGNAPFVQVEGIVNEIRKQVQPQLAPAVEAPPE*
Ga0114966_1031243213300009161Freshwater LakeVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0114969_1002026033300009181Freshwater LakeMQLDLTIDQINVIMSALGNAPFVQVEGIINEIRKQVQPQLAPKDTPPE*
Ga0114969_1002200143300009181Freshwater LakeMQLDLTIEQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0114969_1038613233300009181Freshwater LakeMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPASEAPPE*
Ga0114969_1069678223300009181Freshwater LakeMQLDLTLEQVNLILGALGNAPFVQVEAIINEIRKQALRQLTPAPESTTDA*
Ga0114969_1078930413300009181Freshwater LakeMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPA
Ga0114976_1012630313300009184Freshwater LakePSLERLMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0103848_101539653300009218River WaterMKLELTIEQVNIIMSALGNCPFLQVEAVINEIRKQAQSQLAPKSEPPE*
Ga0103856_1010614223300009233River WaterMNLDLTLEQINIIMSSLGNMPFIQVEGLVNEIRKQVQPQLAPQPDAPE*
Ga0114967_1006805723300010160Freshwater LakeMQLDLTIDQINIIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0133913_1043932563300010885Freshwater LakeMQLDLTIDQINVIMQALGNAPFVQVEGLINEIRKQVVPQVQATPAPYVAPETP*
Ga0133913_1114535423300010885Freshwater LakeMQLDLTIDQINVIMQALGNAPFVQVEGIINEIRKQVQ
Ga0139557_101344753300011010FreshwaterMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAPEAPPE*
Ga0153805_108397813300012013Surface IceINLILAALGNAPFVQVEAVINEIRKQAQRQLTPEPTTES*
Ga0164297_1006534923300013094FreshwaterMQLDLTLEQINVIMQALGNAPFVQVEGLINEIRKQVVPQVQATPAPYVAPETP*
Ga0181338_100585183300015050Freshwater LakePCRQPAVTLERIMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE*
Ga0181338_100683243300015050Freshwater LakeMHLDLTIDQINLIMSALGNAPFVQVEGIINEIRKQVQPQ
Ga0181338_101271223300015050Freshwater LakeMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE*
Ga0181339_103599723300017700Freshwater LakeMRLDLTIDQINLIMSALGNAPFVQVESIINEIRKQVQPQLDPASSSEAA
Ga0181339_103638523300017700Freshwater LakeMHLDLTIDQINLIMSALGNAPFVQVEGIINEIRKQVQPQLAPEKALPE
Ga0181350_101296123300017716Freshwater LakeMRLELTIDQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAAEKAPPE
Ga0181350_102330053300017716Freshwater LakeMHLDLTIDQINLIMQALGNAPFVQVEGVINEIRKQVQPQIATKEEPPA
Ga0181352_101587933300017747Freshwater LakeMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAPEAPPE
Ga0181344_103246333300017754Freshwater LakeMRLELTIEQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0181356_107650953300017761Freshwater LakeIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0181356_124883933300017761Freshwater LakeDQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAAEKAPPE
Ga0181357_104111363300017777Freshwater LakeMHLDLTIDQINLIMQALGNAPFVQVEGVVNEIRKQVQPQIATKEEPPA
Ga0181349_119976813300017778Freshwater LakeHCQSGQSPCRNPSPTLERLMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0181349_124217113300017778Freshwater LakeNVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0181346_107708633300017780Freshwater LakeMHLDLTLDQINLILAALGNAPFVQVEAVINEIRKQAQR
Ga0181346_111308413300017780Freshwater LakeMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPA
Ga0181348_100559613300017784Freshwater LakeMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQ
Ga0181348_121958823300017784Freshwater LakeMHLDLTIDQINLIMSALGNAPFIQVEGIINEIRKQV
Ga0181355_112980133300017785Freshwater LakeMNLELTIEQVNIIMSSLGNAPFIQVEGIINEIRKQVQPQLAPA
Ga0181553_1009667423300018416Salt MarshMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPQEAPPT
Ga0181359_100176343300019784Freshwater LakeMHLDLTIDQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAAEKAPPE
Ga0181359_108306853300019784Freshwater LakePTLERLMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0208091_101653913300020506FreshwaterDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0207942_104044713300020549FreshwaterTLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0194048_1002249123300021519Anoxic Zone FreshwaterMQLDLTIDQINVIMSALGNAPFVQVEGIINEIRKQVQPQLAPAPEAPPT
Ga0194048_1003061223300021519Anoxic Zone FreshwaterMQLDLTLEQINVIMQHLGNAPFVQVEALINEIRKQVQPQLAPEKAPPE
Ga0194048_1006751453300021519Anoxic Zone FreshwaterMRLELTIEQINIIMSALGNAPFVQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0194048_1017756533300021519Anoxic Zone FreshwaterMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0194048_1021971023300021519Anoxic Zone FreshwaterMQLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPTVEAPPE
Ga0194060_1015133513300021602Anoxic Zone FreshwaterMNLDLTIDQINVIMSALGNAPFVQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0222714_1001419963300021961Estuarine WaterMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPTE
Ga0222713_1010233173300021962Estuarine WaterMHLDLTIDQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPPPTPEAA
Ga0222712_1009840233300021963Estuarine WaterMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0181353_110130613300022179Freshwater LakeMRLELTIEQINLIMSALGNAPFVQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0181354_101306723300022190Freshwater LakeMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0181354_105469453300022190Freshwater LakeMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0181354_110237823300022190Freshwater LakeMHLDLTIDQINLIMSALGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0181351_104638933300022407Freshwater LakeMRLELTIEQINLIMSALGNAPFIQVEGIINEIRKQ
Ga0214923_1008786023300023179FreshwaterMNVNLTLEQINTIMQALGNAPFVQVEGIINEIRKQVQPQLAPQEAPPT
Ga0214919_1029717953300023184FreshwaterMTLDLTIDQINVIMSALGNAPFVQVEGIINEIRKQVQPQLAPQEAPPT
Ga0244775_1122896723300024346EstuarineMHLDLTIDQINLIMSALGNAPFIQVEAVINEIRKQVQPQLAPEKAPPE
Ga0208966_104363153300027586Freshwater LenticMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0209188_104375523300027708Freshwater LakeMNLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPQEAPPT
Ga0209297_107079033300027733Freshwater LakeMQLDLTLEQINVIMSALGNAPFVQVEGIINEIRKQAQPQINPAPETP
Ga0209084_103479533300027749Freshwater LakeMHLDLTIEQINVIMQALGNAPFVQVEGIVNEIRKQVQPQLAPQEAPPT
Ga0209084_134923423300027749Freshwater LakeMQLDLTIDQINVIMAALGNAPFVQVEGLINEIRKQV
Ga0209596_100773363300027754Freshwater LakeMQLDLTLEQINVIMASLGNAPFVQVEGIVNEIRKQVQPQLAPAVEAPPE
Ga0209596_100971263300027754Freshwater LakeMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPASEAPPE
Ga0209596_102694123300027754Freshwater LakeMHLDLTLDQINLILAALGNAPFVQVEAVINEIRKQAQRQLTPEPTTES
Ga0209596_102804163300027754Freshwater LakeMQLDLTIDQINVIMSALGNAPFVQVEGIINEIRKQVQPQLAPKDTPPE
Ga0209596_103458033300027754Freshwater LakeMQLDLTIEQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0209088_1000072433300027763Freshwater LakeMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPKDTPPE
Ga0209500_1039486723300027782Freshwater LakeMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAPEAPPE
Ga0209246_1008908433300027785Freshwater LakeMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0209246_1036358923300027785Freshwater LakeMRLELTIDQINLIMSALGNAPFVQVEGIINEIRKQVQPQLAAEKAPPE
Ga0209400_117840053300027963Freshwater LakeIMASLGNAPFVQVEGIVNEIRKQVQPQLAPAVEAPPE
Ga0304729_104401263300028392Freshwater LakeMNLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAQQEAPPT
Ga0315291_1152044323300031707SedimentMTLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0315288_1171007723300031772SedimentMQLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAVEA
Ga0315294_1049158023300031952SedimentMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQIAPKDTPPE
Ga0315274_1073384813300031999SedimentMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLA
Ga0315274_1111873723300031999SedimentMQLDLTLEQINVIMQHLGNAPFVQVEALINEIRKQVQPQLAPAVEAPPE
Ga0315284_1188411523300032053SedimentMHLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0315277_1159265123300032118SedimentMTLDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAPEAPPE
Ga0315268_1179395243300032173SedimentRLMHLDLTIDQINLIMSALGNTPFIQVEGIINEIRKQVQPQLAPKDTPPE
Ga0315276_1163536623300032177SedimentMQLDLTIDQINIIMSALGNAPFIQVEGIINEIRKQVQPQLAPAPEAPPE
Ga0315287_1244364713300032397SedimentDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPAVEAPPE
Ga0316226_120914723300032562FreshwaterMQLDLTLEQINVIMSALGNAPFVQVEGLINEIRKQVVPQV
Ga0316232_121318323300032605FreshwaterMQLDLTLEQINVIMSALGNAPFVQVEGLINEIRKQVVPQVQATVVPEG
Ga0334722_1030777823300033233SedimentMHLDLTLEQINLIMTALGNAPFVQVEPIVNEIRKQVQPQINPAPEAV
Ga0335020_0042423_281_4273300034082FreshwaterMTLDLTIDQINVIMSALGNAPFIQVEGIINEIRKQVQPQLAPEKAPPE
Ga0335048_0359172_1_1413300034356FreshwaterDLTIDQINVIMSSLGNAPFIQVEGIINEIRKQVQPQLAPAPEAPPE


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