NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F086802

Metagenome / Metatranscriptome Family F086802

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086802
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 47 residues
Representative Sequence MNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIY
Number of Associated Samples 75
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.69 %
% of genes near scaffold ends (potentially truncated) 94.55 %
% of genes from short scaffolds (< 2000 bps) 89.09 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.455 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(35.455 % of family members)
Environment Ontology (ENVO) Unclassified
(60.909 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(68.182 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.07%    β-sheet: 0.00%    Coil/Unstructured: 54.93%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.45 %
All OrganismsrootAll Organisms34.55 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000268|M3P_10129345All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage778Open in IMG/M
3300002220|MLSBCLC_10291305Not Available2131Open in IMG/M
3300002476|metazooDRAFT_10809903Not Available611Open in IMG/M
3300005346|Ga0074242_11813953Not Available649Open in IMG/M
3300005581|Ga0049081_10162755All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage812Open in IMG/M
3300005613|Ga0074649_1166995Not Available692Open in IMG/M
3300006805|Ga0075464_10483146All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium757Open in IMG/M
3300007538|Ga0099851_1251614Not Available632Open in IMG/M
3300007559|Ga0102828_1204223All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium507Open in IMG/M
3300007960|Ga0099850_1324116Not Available581Open in IMG/M
3300008113|Ga0114346_1055410Not Available1958Open in IMG/M
3300008266|Ga0114363_1067592All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1368Open in IMG/M
3300008448|Ga0114876_1135631Not Available921Open in IMG/M
3300009085|Ga0105103_10817571Not Available542Open in IMG/M
3300009160|Ga0114981_10730083Not Available523Open in IMG/M
3300009165|Ga0105102_10800373Not Available537Open in IMG/M
3300009166|Ga0105100_11026607All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage518Open in IMG/M
3300009169|Ga0105097_10531381Not Available659Open in IMG/M
3300010354|Ga0129333_10396484Not Available1222Open in IMG/M
3300010354|Ga0129333_10435460Not Available1156Open in IMG/M
3300010354|Ga0129333_10511783All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1051Open in IMG/M
3300010354|Ga0129333_11022840Not Available693Open in IMG/M
3300010354|Ga0129333_11718950Not Available510Open in IMG/M
3300010370|Ga0129336_10335356Not Available835Open in IMG/M
3300012013|Ga0153805_1067993All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage603Open in IMG/M
(restricted) 3300013126|Ga0172367_10075562Not Available2487Open in IMG/M
(restricted) 3300013130|Ga0172363_10631723Not Available676Open in IMG/M
(restricted) 3300013131|Ga0172373_10404619Not Available849Open in IMG/M
(restricted) 3300013131|Ga0172373_10886030Not Available518Open in IMG/M
(restricted) 3300013133|Ga0172362_10780200Not Available637Open in IMG/M
3300013295|Ga0170791_10417821Not Available1149Open in IMG/M
3300013372|Ga0177922_10490240Not Available534Open in IMG/M
3300014502|Ga0182021_10802578Not Available1130Open in IMG/M
(restricted) 3300014720|Ga0172376_10108959All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1949Open in IMG/M
(restricted) 3300014720|Ga0172376_10136503All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1662Open in IMG/M
3300015050|Ga0181338_1021820All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1000Open in IMG/M
3300017701|Ga0181364_1053233Not Available632Open in IMG/M
3300017716|Ga0181350_1041481All Organisms → Viruses → Predicted Viral1244Open in IMG/M
3300017716|Ga0181350_1063230Not Available961Open in IMG/M
3300017716|Ga0181350_1067918Not Available920Open in IMG/M
3300017722|Ga0181347_1028615All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1739Open in IMG/M
3300017722|Ga0181347_1047882All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1295Open in IMG/M
3300017736|Ga0181365_1119573Not Available632Open in IMG/M
3300017747|Ga0181352_1133254Not Available665Open in IMG/M
3300017747|Ga0181352_1137169Not Available653Open in IMG/M
3300017754|Ga0181344_1078709All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage968Open in IMG/M
3300017754|Ga0181344_1083858Not Available934Open in IMG/M
3300017754|Ga0181344_1098988All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium848Open in IMG/M
3300017761|Ga0181356_1173683All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage654Open in IMG/M
3300017761|Ga0181356_1183092All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage631Open in IMG/M
3300017774|Ga0181358_1267526Not Available532Open in IMG/M
3300017777|Ga0181357_1094806All Organisms → Viruses → Predicted Viral1134Open in IMG/M
3300017778|Ga0181349_1237918All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage613Open in IMG/M
3300017778|Ga0181349_1307609Not Available512Open in IMG/M
3300017780|Ga0181346_1311893Not Available531Open in IMG/M
3300017784|Ga0181348_1063866All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1485Open in IMG/M
3300017785|Ga0181355_1304261Not Available598Open in IMG/M
3300019784|Ga0181359_1074259Not Available1284Open in IMG/M
3300019784|Ga0181359_1090144Not Available1137Open in IMG/M
3300019784|Ga0181359_1116642All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage960Open in IMG/M
3300019784|Ga0181359_1123212All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage924Open in IMG/M
3300019784|Ga0181359_1127351Not Available902Open in IMG/M
3300019784|Ga0181359_1134079Not Available869Open in IMG/M
3300019784|Ga0181359_1147517All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium810Open in IMG/M
3300019784|Ga0181359_1159271All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium766Open in IMG/M
3300020160|Ga0211733_11048920Not Available512Open in IMG/M
3300020162|Ga0211735_10339274All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage736Open in IMG/M
3300020162|Ga0211735_11193550All Organisms → Viruses → Predicted Viral1149Open in IMG/M
3300021963|Ga0222712_10500619All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium719Open in IMG/M
3300021963|Ga0222712_10509278All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage710Open in IMG/M
3300022179|Ga0181353_1009179All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2455Open in IMG/M
3300022179|Ga0181353_1148560Not Available541Open in IMG/M
3300022190|Ga0181354_1093754Not Available982Open in IMG/M
3300022190|Ga0181354_1098075All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage956Open in IMG/M
3300022190|Ga0181354_1108227Not Available900Open in IMG/M
3300022407|Ga0181351_1118861Not Available994Open in IMG/M
3300022407|Ga0181351_1122213Not Available974Open in IMG/M
3300022407|Ga0181351_1254362All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage544Open in IMG/M
3300022407|Ga0181351_1268721Not Available519Open in IMG/M
3300022543|Ga0212119_1085163Not Available505Open in IMG/M
3300024570|Ga0255276_1126280Not Available674Open in IMG/M
3300027493|Ga0255103_1090664All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium504Open in IMG/M
3300027594|Ga0255120_1060595Not Available677Open in IMG/M
3300027659|Ga0208975_1014662All Organisms → Viruses2641Open in IMG/M
3300027659|Ga0208975_1099664Not Available845Open in IMG/M
3300027797|Ga0209107_10077061All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1826Open in IMG/M
(restricted) 3300028569|Ga0247843_1148408Not Available966Open in IMG/M
(restricted) 3300028581|Ga0247840_10095679Not Available1981Open in IMG/M
3300031578|Ga0307376_10205348Not Available1343Open in IMG/M
3300031673|Ga0307377_10429047Not Available976Open in IMG/M
3300031758|Ga0315907_10983094Not Available611Open in IMG/M
3300031758|Ga0315907_11163077Not Available543Open in IMG/M
3300031857|Ga0315909_10135098All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2058Open in IMG/M
3300031857|Ga0315909_10237291All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1411Open in IMG/M
3300031951|Ga0315904_10129976All Organisms → Viruses → Predicted Viral2590Open in IMG/M
3300031951|Ga0315904_11482328Not Available501Open in IMG/M
3300032050|Ga0315906_11089460Not Available591Open in IMG/M
3300032092|Ga0315905_11588705Not Available508Open in IMG/M
3300032173|Ga0315268_12407208Not Available540Open in IMG/M
3300034012|Ga0334986_0594515Not Available528Open in IMG/M
3300034062|Ga0334995_0738154Not Available548Open in IMG/M
3300034106|Ga0335036_0305972Not Available1054Open in IMG/M
3300034112|Ga0335066_0390330Not Available763Open in IMG/M
3300034355|Ga0335039_0370038Not Available742Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake35.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater13.64%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater7.27%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater4.55%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.64%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.64%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.73%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.73%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.73%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.73%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.82%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.82%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment1.82%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.82%
LakeEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake0.91%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment0.91%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.91%
LoticEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic0.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.91%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.91%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.91%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.91%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.91%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000268Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters ver2EnvironmentalOpen in IMG/M
3300002220Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011EngineeredOpen in IMG/M
3300002476Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012EnvironmentalOpen in IMG/M
3300005346Saline sediment microbial community from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013133 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2EnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300021093Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surfaceEnvironmentalOpen in IMG/M
3300021376Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surfaceEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022543Indian_combined assemblyEnvironmentalOpen in IMG/M
3300024570Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027493Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300027594Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8hEnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300028581 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17mEnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034355Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
M3P_1012934543300000268LoticMNYTQLTSAIKGYAENDFPATAGSFTSADQIATFVEN
MLSBCLC_1029130573300002220Hydrocarbon Resource EnvironmentsMNYAELTAAIRAYCENDFPQAVGAGGLTSAEQIARFVQ
metazooDRAFT_1080990313300002476LakeMNYTQLTDAIKGYCENDFPETVGSGDLTSAEQIAVFVQNAEERIYN
Ga0074242_1181395323300005346Saline Water And SedimentMNYAQLTAAIKGYAENDFPDTVGSFTSATQIATFVEETEQRVFNAVQLLDLRKNV
Ga0049081_1016275513300005581Freshwater LenticMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMVQL
Ga0074649_116699513300005613Saline Water And SedimentMNYAQLTAAIKGYAENDFPDTVGSFTSATQIATFVEETEQRVFNA
Ga0075464_1048314643300006805AqueousMNYTQLTSAIKGFAENDFPATVGSFTSADQIARDQLSPE
Ga0099851_125161413300007538AqueousMNYAQLVSAIKGYAENDFPATAGSFTSTDQVNTFIREAEQR
Ga0102828_120422313300007559EstuarineVNYTELTAAIKGYAENTFPDTVGSFTSANQIATFVKMAEQ
Ga0099850_132411633300007960AqueousVTYTELVARIKAYCENDFPQAVGAGGLTSTEQVNTFILQAEQRIYNSVQFPSLRK
Ga0114346_105541013300008113Freshwater, PlanktonMNYTELTAAIKAYCENDFPQVVGSGGLTSAEQIATF
Ga0114363_106759213300008266Freshwater, PlanktonMNYTELSAAVKAYCENDFPQVVGSGGLTSAEQIAIFVQNAEER
Ga0114876_113563143300008448Freshwater LakeMNYTQLTAAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSIF
Ga0105103_1081757133300009085Freshwater SedimentMNYTELSARIQAYAENDFPASAGNLTSAEQIATFVEQA
Ga0114981_1073008333300009160Freshwater LakeMNYTELTSVIKSYAENDFPATVGSFTSAQQLATFVQLSEQRIYN
Ga0105102_1080037323300009165Freshwater SedimentMNYSALASAIKGYAENEFLITAGSFSSTDQINTFIQQAERRIYNM
Ga0105100_1102660733300009166Freshwater SedimentMNYTELSARIQAYAENDFPASAGNLTSAEQIATFVEQAEERIY
Ga0105097_1053138133300009169Freshwater SedimentMNYTQLTSAIKGFAENDFPATVGSFTSPEQLARFVQLAEQ
Ga0129333_1039648453300010354Freshwater To Marine Saline GradientMNYTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQRIYNTV
Ga0129333_1043546013300010354Freshwater To Marine Saline GradientMNYTQLTASIKAYSENDFPQAVGAGGLTSSEQIERFVQQAEQRIFNSIQFPALR
Ga0129333_1051178313300010354Freshwater To Marine Saline GradientVNYTQLTAAIKAYSENDFPQAVGSGGLTSAEQIARFVQEAEQRIYNSVQFPV
Ga0129333_1102284013300010354Freshwater To Marine Saline GradientMNYTELTASIKAYCENDFPQAVGAGGLTSAEQIARFVQQ
Ga0129333_1171895013300010354Freshwater To Marine Saline GradientMNYTELSAAIKAYCENDFPQVVGSGGLTSAEQIATFVQNAEERI
Ga0129336_1033535613300010370Freshwater To Marine Saline GradientMNYTQLTAAVKAYAENDFPQAVGAGGLTSAEQIARFVQQA
Ga0153805_106799313300012013Surface IceMNYTELTAAIKAYCENDFPQVVGSGGLTSAEQIATFVQNAEERIYNSVQI
(restricted) Ga0172367_1007556263300013126FreshwaterMNYTELSAAIKAYCENDFPQVVGSGGLTSAEQIATFVQNAEERIYNSVQIPAIRKNMT
(restricted) Ga0172367_1050757813300013126FreshwaterMNYAQLVSAIKGYAENDFPATAGNFTSTDQVNTFIKEAEQRIYNSVQF
(restricted) Ga0172363_1063172333300013130SedimentMNYTQLTAAIKAYSENDFPQAVGAGGLTSAEQIARFVQQAEQRIYNSIQFPALRKN
(restricted) Ga0172373_1040461913300013131FreshwaterMNCTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQ
(restricted) Ga0172373_1088603013300013131FreshwaterMNYTQLTASIKAYSENDFPQAVGAGGLTSSEQIARFVQQAEQRIYNSIQFP
(restricted) Ga0172362_1078020043300013133SedimentMNYTQLTAAIKAYSENDFPQAVGAGGLTSAEQIARFVQQ
(restricted) Ga0172375_1053487513300013137FreshwaterMNYSALASAIRGYAENTFPDTAGNFTSTDQINTFIRQAEERIYNSVQFPSIRKNVTGP
Ga0170791_1041782113300013295FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQRIYNMVQL
Ga0177922_1049024033300013372FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQRIYN
Ga0182021_1080257813300014502FenMNYTELTSVIKSYAENDFPATVGSVTSAQQLATFVQLAEQRIYNMVQMP
(restricted) Ga0172376_1010895953300014720FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQSVFN
(restricted) Ga0172376_1013650363300014720FreshwaterMNYTELTAAIKAYAENNFPQAVGAGGLTSSEQIARFVQQAEQRIYNSIQFPA
(restricted) Ga0172376_1070679613300014720FreshwaterMNYAQLVSAIKGYAENDFPATAGNFTSTDQVNTFIKEAEQRIYNSVQFPVIR
Ga0181338_102182013300015050Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRQNVTG
Ga0181364_105323333300017701Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQ
Ga0181350_104148113300017716Freshwater LakeVNYTELSSAIQGYAENEFPSTAGSFTSADQIATFVEQAEQRIYNT
Ga0181350_106323013300017716Freshwater LakeMNYTQLTSAINGFAENDFPATVGSFTSAEQIARFVQL
Ga0181350_106791813300017716Freshwater LakeMNYTQLTSAIKGFAENDFPATGWSFTSAEQRARFVQ
Ga0181347_102861513300017722Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRQNVTGNM
Ga0181347_104788213300017722Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRI
Ga0181365_111957333300017736Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRQNVTGN
Ga0181352_113325433300017747Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNM
Ga0181352_113716933300017747Freshwater LakeVNYTELKARIKAYCENDFPQAVGAGGLTSDAQLNTFILQAEQRIYNSVQF
Ga0181344_107870943300017754Freshwater LakeMNYAQLSSAIKGYCENDFPATVGSFTSTDQIDTFIKQAEQRIYNSVQLPPLRKNI
Ga0181344_108385843300017754Freshwater LakeMNYTQLTASIKAYAENDFPQAVGAGGLTSAEQIARFVQQAEQRIYN
Ga0181344_109898843300017754Freshwater LakeMNYTQLTSAIKGFAENDFPETVGSFTSPEQIARFVQLAEQSVFNTVQMP
Ga0181356_117368313300017761Freshwater LakeMNYTELSSAIQGYAENEFPSTAGSFTSADQIATFVEQAEQRIY
Ga0181356_118309213300017761Freshwater LakeVNYTELSSAIQGYAENEFPSTAGSFTSADQIATFVEQAEQRIY
Ga0181358_126752633300017774Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIY
Ga0181357_109480653300017777Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIY
Ga0181349_123791833300017778Freshwater LakeMNYTQLTSSIKGFAENDFPATVGSFTSAEQIARFVQLAE
Ga0181349_130760933300017778Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVF
Ga0181346_131189333300017780Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTV
Ga0181348_106386653300017784Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMVQLPAIRKNVT
Ga0181355_130426133300017785Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQRIY
Ga0181359_107425913300019784Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMVQS
Ga0181359_109014453300019784Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMVQLPAIRK
Ga0181359_111664213300019784Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQR
Ga0181359_112321213300019784Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQR
Ga0181359_112735113300019784Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTL
Ga0181359_113407913300019784Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFV
Ga0181359_114751743300019784Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRQNVTGNMT
Ga0181359_115927113300019784Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAE
Ga0211733_1104892033300020160FreshwaterMNYTQLTSAIKGFAKNDFPATVGSFTSAEQIARFVQLAEQSVFNTVQL
Ga0211735_1033927413300020162FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQ
Ga0211735_1119355013300020162FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRKNMTGNMTSGN
Ga0194124_1022379013300020196Freshwater LakeMNYAQLVSAIKGYAENDFPATAGNFTSTDQVNTFIKEAEQRIYNSVQFPAIRK
Ga0194123_1019408543300021093Freshwater LakeMNYAQLVSAIKGYAENDFPATAGNFTSTDQLNTFIKQAEQRIYNSVQFPVIRKNV
Ga0194130_1023086513300021376Freshwater LakeMNYAQLVSAIKGYAENDFPATAGNFTSTDQVNTFIKEAEQRIYNSVQFPAIRKNV
Ga0222712_1050061913300021963Estuarine WaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAE
Ga0222712_1050927813300021963Estuarine WaterVNYTELSAAIQGYAENEFPSTAGSFTSADQIATFVEQAEQRIYN
Ga0181353_100917983300022179Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQRIYNTVQLPAIRK
Ga0181353_114856033300022179Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSADQIARFVQLAEQRIYNT
Ga0181354_109375413300022190Freshwater LakeVNYTELSSAIQGYAENEFPSTAGSFTSADQIATFVEQAEQRIYNTIQ
Ga0181354_109807543300022190Freshwater LakeMNYTQLTSSIKGFAENDFPATVGSFTSAEQIARFV
Ga0181354_110822743300022190Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQS
Ga0181351_111886143300022407Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRQNVTGNMTSGNKY
Ga0181351_112221343300022407Freshwater LakeMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRQNVTGNMTSGNKF
Ga0181351_125436233300022407Freshwater LakeMNYTQLTSSIKGFAENDFPATVGSFTSAEQIARFVQLAF
Ga0181351_126872133300022407Freshwater LakeMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNM
Ga0212119_108516323300022543FreshwaterMNYTQLTAAIKAYAENDFPQAVGSGGLTSAEQIARFVQEAEQRIYNSVQFPVIRKNS
Ga0255276_112628033300024570FreshwaterMNYTQLTAAIKGFAENDFPTTVGSFTSPEQIARFVQLAEQRIYNSVQM
Ga0255103_109066413300027493FreshwaterMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMVQLP
Ga0255120_106059513300027594FreshwaterMNYTQLTTAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMVQLPAI
Ga0208975_101466213300027659Freshwater LenticMNYTELTASIKAYCENDFPQAVGAGGLTSAEQIARFVQQAEQRIYNS
Ga0208975_109966443300027659Freshwater LenticMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQ
Ga0209107_1007706113300027797Freshwater And SedimentMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMVQLPAIRK
(restricted) Ga0247843_114840843300028569FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRKNMTGNMTSGNRFL
(restricted) Ga0247840_1009567913300028581FreshwaterMNYTQLTASIKAYCENDFPQAVGAGGLTSAEQIAR
Ga0307376_1020534853300031578SoilMNYAQLTAAIKGYAENDFPDTVGSFTSATQIATFVEETEQRVFNAVQLLDLRKNVL
Ga0307377_1042904743300031673SoilMNYAQLTAAIKGYAENDFPDTVGSFTSATQIATFVE
Ga0315907_1098309433300031758FreshwaterVNYTELKARIKAYCENDFPQAVGAGGLTSDQQIATFVQQAEQRIYNSVQFPSLR
Ga0315907_1116307713300031758FreshwaterMNYAELTAAIKAYCENDFPQAVGAGGLTSAEQIARFV
Ga0315909_1013509863300031857FreshwaterMNYTQLTAAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSIFNTVQMPAFRKN
Ga0315909_1023729113300031857FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQRIYNMV
Ga0315904_1012997673300031951FreshwaterMNYAELTAAIKAYCENDFPQAVGAGGLTSAEQIARFVQQAEQRIFNTVQFPSIRKNV
Ga0315904_1148232813300031951FreshwaterMNYTELTASIKAYCENDFPQAVGAGGLTSAEQIARFVQQAEQRIY
Ga0315906_1108946033300032050FreshwaterMNYTELTAAIKAYCENDFPQVVGSGGLTSAEQIATFVQNAEERIYNSVQIPAI
Ga0315905_1158870533300032092FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFN
Ga0315268_1240720813300032173SedimentVNYTELTAAIKGYTENTYPDTVGSFTTANQIATFVQMAEQRIYNMV
Ga0334986_0594515_1_1713300034012FreshwaterMNYTELTAAIKAYCENDFPQVVGSGGLTSAEQIATFVQNAEERIYNSVQIPAIRKNM
Ga0334995_0738154_365_5473300034062FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRKNMTGNMT
Ga0335036_0305972_1_1623300034106FreshwaterMNYTQLTSAIKGFAENDFPATVGSFTSAEQIARFVQLAEQSVFNTVQLPAFRKN
Ga0335066_0390330_3_1973300034112FreshwaterMNYTQLTSAIKGFAENDFPATVGLFTSAEQIARFVQLAEQSVFNTVQLPAFRKNMTGNMTSGNKY
Ga0335039_0370038_3_1373300034355FreshwaterMNYTQLTASIKAYAENDFPQAVGAGGLTSAEQIARFVQQAEQRIY


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