NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F086792

Metagenome / Metatranscriptome Family F086792

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086792
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 38 residues
Representative Sequence AQAIVDAEVAAAQAAWDALPEEQKTNLNSQRPTAITLP
Number of Associated Samples 72
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 78.18 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.727 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(44.545 % of family members)
Environment Ontology (ENVO) Unclassified
(68.182 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(68.182 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.85%    β-sheet: 0.00%    Coil/Unstructured: 65.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF137592OG-FeII_Oxy_5 0.91
PF02195ParBc 0.91
PF136402OG-FeII_Oxy_3 0.91



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.73 %
All OrganismsrootAll Organisms17.27 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005512|Ga0074648_1029882Not Available2773Open in IMG/M
3300005582|Ga0049080_10049537Not Available1452Open in IMG/M
3300006805|Ga0075464_10978547Not Available530Open in IMG/M
3300006916|Ga0070750_10226256Not Available819Open in IMG/M
3300007344|Ga0070745_1086768Not Available1238Open in IMG/M
3300007538|Ga0099851_1117325Not Available1007Open in IMG/M
3300007542|Ga0099846_1108150Not Available1021Open in IMG/M
3300007640|Ga0070751_1094993Not Available1238Open in IMG/M
3300007960|Ga0099850_1092040Not Available1258Open in IMG/M
3300009068|Ga0114973_10063726Not Available2147Open in IMG/M
3300009152|Ga0114980_10063072Not Available2236Open in IMG/M
3300009152|Ga0114980_10790232Not Available528Open in IMG/M
3300009160|Ga0114981_10167562Not Available1209Open in IMG/M
3300009161|Ga0114966_10174890Not Available1379Open in IMG/M
3300009161|Ga0114966_10488130Not Available704Open in IMG/M
3300009170|Ga0105096_10159308All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon1136Open in IMG/M
3300009180|Ga0114979_10063820All Organisms → Viruses → Predicted Viral2299Open in IMG/M
3300009183|Ga0114974_10178998Not Available1308Open in IMG/M
3300010354|Ga0129333_10501456Not Available1064Open in IMG/M
3300010368|Ga0129324_10003948Not Available8709Open in IMG/M
3300012766|Ga0138282_1090737Not Available660Open in IMG/M
(restricted) 3300013126|Ga0172367_10111601Not Available1896Open in IMG/M
(restricted) 3300013126|Ga0172367_10766040Not Available503Open in IMG/M
3300013372|Ga0177922_10247357Not Available1094Open in IMG/M
3300017701|Ga0181364_1069032Not Available541Open in IMG/M
3300017707|Ga0181363_1028661Not Available1059Open in IMG/M
3300017716|Ga0181350_1013368All Organisms → Viruses → Predicted Viral2326Open in IMG/M
3300017716|Ga0181350_1039410All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300017722|Ga0181347_1019434All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2152Open in IMG/M
3300017722|Ga0181347_1046523All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon1317Open in IMG/M
3300017722|Ga0181347_1054091Not Available1208Open in IMG/M
3300017723|Ga0181362_1087877Not Available624Open in IMG/M
3300017736|Ga0181365_1019935All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon1690Open in IMG/M
3300017736|Ga0181365_1037238Not Available1225Open in IMG/M
3300017736|Ga0181365_1074240Not Available836Open in IMG/M
3300017736|Ga0181365_1084802Not Available774Open in IMG/M
3300017747|Ga0181352_1022510All Organisms → Viruses → Predicted Viral1946Open in IMG/M
3300017747|Ga0181352_1040023Not Available1389Open in IMG/M
3300017761|Ga0181356_1020477Not Available2434Open in IMG/M
3300017761|Ga0181356_1027889All Organisms → Viruses → Predicted Viral2035Open in IMG/M
3300017761|Ga0181356_1063344Not Available1254Open in IMG/M
3300017761|Ga0181356_1065201Not Available1231Open in IMG/M
3300017761|Ga0181356_1067237Not Available1208Open in IMG/M
3300017761|Ga0181356_1068912Not Available1191Open in IMG/M
3300017774|Ga0181358_1056355All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon1475Open in IMG/M
3300017774|Ga0181358_1067648Not Available1323Open in IMG/M
3300017774|Ga0181358_1082536Not Available1172Open in IMG/M
3300017777|Ga0181357_1090333Not Available1167Open in IMG/M
3300017778|Ga0181349_1082539Not Available1221Open in IMG/M
3300017778|Ga0181349_1085121All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon1199Open in IMG/M
3300017778|Ga0181349_1086387Not Available1188Open in IMG/M
3300017778|Ga0181349_1087937All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon1176Open in IMG/M
3300017778|Ga0181349_1260737Not Available575Open in IMG/M
3300017780|Ga0181346_1024879Not Available2501Open in IMG/M
3300017780|Ga0181346_1232405Not Available652Open in IMG/M
3300017780|Ga0181346_1318933Not Available523Open in IMG/M
3300017784|Ga0181348_1174889Not Available787Open in IMG/M
3300017784|Ga0181348_1182415Not Available764Open in IMG/M
3300017784|Ga0181348_1260321Not Available596Open in IMG/M
3300017785|Ga0181355_1103433All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon1176Open in IMG/M
3300017785|Ga0181355_1131949Not Available1017Open in IMG/M
3300017785|Ga0181355_1201553Not Available782Open in IMG/M
3300017949|Ga0181584_10739128Not Available586Open in IMG/M
3300019784|Ga0181359_1072446Not Available1303Open in IMG/M
3300019784|Ga0181359_1082399All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300019784|Ga0181359_1084160Not Available1187Open in IMG/M
3300019784|Ga0181359_1149366Not Available803Open in IMG/M
3300020220|Ga0194119_10937471Not Available501Open in IMG/M
3300021960|Ga0222715_10217117Not Available1133Open in IMG/M
3300021960|Ga0222715_10229158Not Available1093Open in IMG/M
3300021962|Ga0222713_10539247Not Available691Open in IMG/M
3300022167|Ga0212020_1045674Not Available744Open in IMG/M
3300022190|Ga0181354_1017606Not Available2226Open in IMG/M
3300022190|Ga0181354_1202117Not Available591Open in IMG/M
3300022200|Ga0196901_1025904All Organisms → Viruses → Predicted Viral2320Open in IMG/M
3300022200|Ga0196901_1082908Not Available1141Open in IMG/M
3300022407|Ga0181351_1006654All Organisms → cellular organisms → Bacteria → Proteobacteria4503Open in IMG/M
3300022407|Ga0181351_1017841Not Available2982Open in IMG/M
3300022407|Ga0181351_1108283Not Available1062Open in IMG/M
3300023179|Ga0214923_10250320Not Available999Open in IMG/M
3300025769|Ga0208767_1210973Not Available643Open in IMG/M
3300025818|Ga0208542_1018330Not Available2375Open in IMG/M
3300025818|Ga0208542_1026954Not Available1898Open in IMG/M
3300025818|Ga0208542_1104192Not Available812Open in IMG/M
3300025889|Ga0208644_1061323Not Available2021Open in IMG/M
3300025896|Ga0208916_10033093All Organisms → Viruses → Predicted Viral2084Open in IMG/M
3300027114|Ga0208009_1045998Not Available837Open in IMG/M
3300027608|Ga0208974_1146729Not Available601Open in IMG/M
3300027627|Ga0208942_1191352Not Available529Open in IMG/M
3300027708|Ga0209188_1101247Not Available1156Open in IMG/M
3300027720|Ga0209617_10312806Not Available586Open in IMG/M
3300027754|Ga0209596_1039584Not Available2564Open in IMG/M
3300027770|Ga0209086_10109858Not Available1395Open in IMG/M
3300027782|Ga0209500_10144105Not Available1128Open in IMG/M
3300027798|Ga0209353_10459637Not Available513Open in IMG/M
3300027804|Ga0209358_10161631Not Available1189Open in IMG/M
3300027917|Ga0209536_100698714Not Available1259Open in IMG/M
3300027973|Ga0209298_10044103Not Available2097Open in IMG/M
(restricted) 3300027977|Ga0247834_1050222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.2251Open in IMG/M
3300028025|Ga0247723_1012735Not Available3149Open in IMG/M
(restricted) 3300028557|Ga0247832_1124271Not Available1043Open in IMG/M
(restricted) 3300028581|Ga0247840_10074854All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon2396Open in IMG/M
3300031669|Ga0307375_10332448Not Available964Open in IMG/M
3300031857|Ga0315909_10405603Not Available975Open in IMG/M
3300031952|Ga0315294_10433369Not Available1221Open in IMG/M
3300033233|Ga0334722_10008904Not Available9499Open in IMG/M
3300033992|Ga0334992_0534164Not Available503Open in IMG/M
3300034106|Ga0335036_0871373Not Available514Open in IMG/M
3300034374|Ga0348335_046640Not Available1713Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake44.55%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous16.36%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake12.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater7.27%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.73%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.73%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.82%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.82%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.91%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.91%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.91%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.91%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.91%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.91%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.91%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.91%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.91%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300012766Freshwater microbial communities from Lake Montjoie, Canada - M_140807_M_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020220Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100mEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027114Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027627Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027720Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027977 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12mEnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028557 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4mEnvironmentalOpen in IMG/M
3300028581 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17mEnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033992Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0074648_102988213300005512Saline Water And SedimentQAIVDAEVLKAQQAYDALPEEQKQNRQRPTNITLK*
Ga0049080_1004953733300005582Freshwater LenticFKTKSEAQAIVDAEVAKAQAAYDALPEDQKNNSLSRRPENIVLE*
Ga0075464_1097854713300006805AqueousEKTKAEAQAIVDGEVAKAQAAYDALPEEQKTNLSRQRPTAINLP*
Ga0070750_1022625623300006916AqueousVDAEVAAAQAAWDALPEEQKNNGINQRPTAITLP*
Ga0070745_108676813300007344AqueousAIVDAEVAAAQAAWDALPEEQKNGINNQRPTAITLP*
Ga0070745_135933523300007344AqueousTLVDAEVTAAQAAWDALSEEQQNLNPRPTDITLP*
Ga0099851_111732513300007538AqueousDEAQANVDAEVLKAQQAFDALPEEQKLNRLRPTNITLK*
Ga0099846_110815013300007542AqueousIVDAEVAAAQAAWDALPEEQKNGINNQRPTAITLP*
Ga0070751_109499313300007640AqueousAIVDAEVAAAQAAWDALPEEQKNNGINQRPTAITLP*
Ga0099850_109204013300007960AqueousKDEAQAIVDAEVLKAQQAFDALPEAEKQINQRPTNITLK*
Ga0114973_1006372613300009068Freshwater LakeQAIVDGEVSKAQTAYDALPEDQKTNLNRQRPTAINLP*
Ga0114980_1006307213300009152Freshwater LakeAIVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP*
Ga0114980_1079023223300009152Freshwater LakeEEAQAIVDAIITQAQADWDALPENQKQEPFRNRRPTAIVLE*
Ga0114981_1016756213300009160Freshwater LakeKTKAEAQAIVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP*
Ga0114966_1017489013300009161Freshwater LakeQAIVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP*
Ga0114966_1048813013300009161Freshwater LakeIVDVEVTAAQAAWDALPDEQKQSPFNRQRPTAIVLE*
Ga0105096_1015930813300009170Freshwater SedimentKTKAEAQAIVDAEVAKAQAAYDALPAEQKTNLDRQRPTAINLP*
Ga0114979_1006382033300009180Freshwater LakeGVEKTKAEAQAIVDGEVSKAQAAYDALPEDQKTNLNRQRPTAINLP*
Ga0114974_1017899813300009183Freshwater LakeKTKAEAQAIVDGEVSKAQAAYDALPEDQKTNLNRQRPTAINLP*
Ga0129333_1050145623300010354Freshwater To Marine Saline GradientVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP*
Ga0129324_1000394813300010368Freshwater To Marine Saline GradientAESQAIVDEQVALAQAAWDALPEEQKQEPFNRPRPTAIVLE*
Ga0138282_109073723300012766Freshwater LakeQAIVDAEVAKAQAVWDALPDEQKQSPFNRQRPTAIVLE*
(restricted) Ga0172367_1011160123300013126FreshwaterDAEVATAQAAWDALPEEQRNRPGFNQRPTAITLP*
(restricted) Ga0172367_1076604013300013126FreshwaterKAEAQAIVDEQVAIAQAAWDALPEEQKQQPFNRQRPTAIVLE*
Ga0177922_1024735713300013372FreshwaterAQAIVTAEVTAAQAVYDALPEDQKNRPGFNQRPTAITLP*
Ga0181364_106903213300017701Freshwater LakeAQAIVTAEVTAAQAAYDALPEDQKNRPGFNQRPTAITLP
Ga0181363_102866123300017707Freshwater LakeVEKTKAEAQAIVDGEVSKAQAAYDALPAEQKTNLNRQRPTAINLP
Ga0181350_101336813300017716Freshwater LakeKAEAQAIVDGEVAKAQAAYDALPAEQKTNLNRQRPTAINLP
Ga0181350_103941033300017716Freshwater LakeIVDVEVTAAQAAWDALPDAQKQAPIGRQRPTAIVLE
Ga0181347_101943413300017722Freshwater LakeAIVDGEVSKAQALWDALPAEQKTNLNRQRPTAINLP
Ga0181347_104652333300017722Freshwater LakeKAEAQAIVDAEVAKAQAAYDALPEDQKNNSLSSRPENIVLE
Ga0181347_105409113300017722Freshwater LakeAIVTAEVTAAQAAWDALPEDQKNRPGFNQRPTAITLP
Ga0181362_108787713300017723Freshwater LakeAQAIVDAEVAKAQAAWDALPDSEKNNPVRTQRPTAIVLE
Ga0181365_101993513300017736Freshwater LakeEAQAIVTAEVTAAQAVYDALPEDQKNRPGFNQRPTAITLP
Ga0181365_103723813300017736Freshwater LakeIVDVEVTAAQAAWDALPDEQKQKPFNRQRPTAIVLE
Ga0181365_107424013300017736Freshwater LakeAEAQAIVDVEVTAAQAAWDALPDEQKQQPFSRQRPTAIVLE
Ga0181365_108480213300017736Freshwater LakeIVDVEVTAAQAAWDALPDEQKQNPINRQRPTAIVLE
Ga0181352_102251023300017747Freshwater LakeVDAEVTAAQAAYDALPEDQKNRPGFNQRPTAITLP
Ga0181352_104002313300017747Freshwater LakeAIVDGEVSKAQAAYDALPEDQKTNLNRQRPTAINLP
Ga0181356_102047743300017761Freshwater LakeAEAQAIVDAEVAKAQAAYDALPDEQKQQPFNRQRPTAIVLE
Ga0181356_102788913300017761Freshwater LakeAIVDGEVSKAQAAYDALPAEQKTNLNRQRPTAINLP
Ga0181356_106334413300017761Freshwater LakeKAEAQAIVDGEVSKAQAAYDALPEDQKTNLNRQRPTAINLQ
Ga0181356_106520133300017761Freshwater LakeAEAQAIVDAEVATAQAAWDALPDEQKQLPFRQRPAAIVLE
Ga0181356_106723733300017761Freshwater LakeVDAEVAKAQAAWDALPDAQKQAPTNKQRPTAIVLE
Ga0181356_106891213300017761Freshwater LakeAQAIVDVEVTAAQAAWDALPDAQKQAPMNRQRPTAIVLE
Ga0181358_105635513300017774Freshwater LakeQAIVDAEVAKTQAAYDALPEDQKNNSLNRRPENIVLE
Ga0181358_106764813300017774Freshwater LakeAQAIVDVEVTAAQAAWDALPDAQKQEPIIRQRPTAIVLE
Ga0181358_108253633300017774Freshwater LakeIVDVEVTTAQAAWDALPDAQKQAPIGRQRPTAIVLE
Ga0181357_109033313300017777Freshwater LakeVDVEVTAAQAAWDALPDAQKQAPMNRQRPTAIVLK
Ga0181349_108253913300017778Freshwater LakeAIVDVEVTAAQAAWDALPDAQKQAPMNRQRPTAIVLK
Ga0181349_108512133300017778Freshwater LakeQAIVDAEVAKAQAAYDALPEDQKNNSLNRRPENIVLE
Ga0181349_108638713300017778Freshwater LakeIVDAEVAKAQAAWDALSDEQKQQPFNRQRPTAIVLE
Ga0181349_108793723300017778Freshwater LakeQAIVTAEVTAAQAAWDAIPEEQRSKRPETQRPAAITLP
Ga0181349_126073713300017778Freshwater LakeAQAIVDVEVTAAQAAWDALPDEQKQQTFNRQRPTAIVLE
Ga0181346_102487943300017780Freshwater LakeVTAEVTAAQAVYDALPEEQKNRPGFNQRPTAITLP
Ga0181346_123240513300017780Freshwater LakeTQAIVTAEVTSAQAAYDALPDEQKNRPGFNQRPTAITLP
Ga0181346_131893313300017780Freshwater LakeIDAEVTAAQAAWDALPDEQKQQPLGRLRPTTIVLE
Ga0181348_117488913300017784Freshwater LakeVDVEVTATQAACDALPDAQKQAPMNRQRPTAIVLE
Ga0181348_118241513300017784Freshwater LakeIVDAEVATAQAAWDALTDEQKTNLNRTRPTAIVLE
Ga0181348_126032123300017784Freshwater LakeVDAEVTAAQAAYDALPEEQKNRPEFNQRPTAITLP
Ga0181355_110343313300017785Freshwater LakeAIVTAEVTAAQAAWDAIPEEQRSKRPETQRPAAITLP
Ga0181355_113194923300017785Freshwater LakeAEAQAIVDVEVTAAQAAWDALPEELKNNPVKRQRPTAIVLE
Ga0181355_120155313300017785Freshwater LakeIVDAEVAKAQAAWDALPDAQKQAPIGRQRPTAIVLE
Ga0181584_1073912813300017949Salt MarshIVDAEVAAAQAAWDALPEEQKNNEINQRPTAITLP
Ga0181359_107244613300019784Freshwater LakeESFKTKSEAQAIVDAEVAKAQAAYDALPEDQKNNSLNRRPENIVLE
Ga0181359_108239933300019784Freshwater LakeVDVEVTAAQAAWDALPDAQKQAPMNRQRPTAIVLE
Ga0181359_108416033300019784Freshwater LakeAEAQAIVDAEVATAQAAWDALPDEQKQKPFRQRPTAIVLE
Ga0181359_114936613300019784Freshwater LakeIVTAEVTAAQAVYDALPEDQKNRPGFNQRPTAITLP
Ga0194119_1093747123300020220Freshwater LakeKTKAEAQAIVDEQVAIAQAAWDTLPEEQKQNPVNRQRPTAIVLE
Ga0222715_1021711713300021960Estuarine WaterAQAIVDAEVLKAQQAFDALPEEQKQIDRRPTNITLK
Ga0222715_1022915813300021960Estuarine WaterKDEAQAIVDAEVLKAQQAFDALPEEQKQIDRRPTNITLK
Ga0222713_1053924723300021962Estuarine WaterEAQAIVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP
Ga0212020_104567423300022167AqueousAQAIVDAEVAAAQAAWDALPEEQKTNLNSQRPTAITLP
Ga0181354_101760613300022190Freshwater LakeIVDVEVTAAKAAWDALPDEQKQQPFNRQRPTAIVLE
Ga0181354_120211713300022190Freshwater LakeAIVDAEVAKAQAAYDALPDEQKQQPFNRQRPTAIVLE
Ga0196901_102590413300022200AqueousIVDAEVAAAQAAWDALPEEQKNNGINQRPTAITLP
Ga0196901_108290813300022200AqueousTKDEAQAIVDAQVLKAQQAYDALPEAQKQINQRPTNITLK
Ga0181351_100665473300022407Freshwater LakeTEAQAIVDAEVAKAQAAYDALPEDQKNNSLNRRPENIVLE
Ga0181351_101784113300022407Freshwater LakeVDAEVATAQAAWDALPDAQKQAPMNRQRPTAIVLE
Ga0181351_110828323300022407Freshwater LakeAQAIVDVEVTAAQAAWDALPDAQKQAPIGRQRPTAIVLE
Ga0214923_1025032023300023179FreshwaterTKAEAQAIFDAEVAKAQAAYDALPEDQKTNLNRQRPTAINLP
Ga0208767_121097323300025769AqueousIVDAEVAAAQAAWDALPEEQKQNTTIATQRPIAIILE
Ga0208542_101833013300025818AqueousDEAQAIVDAEVLKAQQAFDALPEEQKQDRQRPTNITLK
Ga0208542_102695413300025818AqueousDEAQAIVDAEVLKAQQAFDALPEERKQFNQRPTNITLK
Ga0208542_110419213300025818AqueousEAQAIVDAEITAAQQAYDALPEAEKQINQRPTNITLK
Ga0208644_106132313300025889AqueousDEAQAIVDAEVLKAQQAFDALPEEQKQNRQRPTNIILK
Ga0208916_1003309333300025896AqueousQAIVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP
Ga0208009_104599823300027114Deep SubsurfaceAIVDAEVAKAQAAWDALPDAQKQDPIIRQRPTAIVLE
Ga0208974_114672913300027608Freshwater LenticQAIVDAEVAKAQAAWDALPDEQKQQPLGRQRPTAIVLE
Ga0208942_119135223300027627Freshwater LenticQAIVDGEVSKAQALWDALPAEQKTNLNRQRPTAINLP
Ga0209188_110124723300027708Freshwater LakeKTKAEAQAIVDGEVATAQAAYDALPEEQKTNLNRQRPTAINLP
Ga0209617_1031280623300027720Freshwater And SedimentKAEAQAIVDGEVSKAQALWDALPAEQKTNLNRQRPTAINLP
Ga0209596_103958413300027754Freshwater LakeIVDAEVTSAQAVYDALPEDQKNRPGFNQRPTAITLP
Ga0209086_1010985823300027770Freshwater LakeERGVEKTKAEAQAIVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP
Ga0209500_1014410513300027782Freshwater LakeKAEAQAIVDAEVTAAQAVYDALPEDQKNRPGFNQRPTAITLP
Ga0209353_1045963713300027798Freshwater LakeAQAIVDAEVAKAQATWDSLPAEQKTGVSPYGPRPSAITLE
Ga0209358_1016163123300027804Freshwater LakeEAQAIVDAEVTAAQAAYDALPEDQKNRPGFNQRPTAITLP
Ga0209536_10069871433300027917Marine SedimentQAIVDAEVLKAQQAYDALPEEQKQFKQRPTNITLK
Ga0209298_1004410313300027973Freshwater LakeAIVDGEVAKAQAAYDALPEDQKTNLNRQRPTAINLP
(restricted) Ga0247834_105022213300027977FreshwaterIVDAEVTAAQAAWDALPDEQKNRPGFNQRPTAITLP
Ga0247723_101273513300028025Deep Subsurface SedimentIVDAEVAKAQAAYDALPEEQKNRPGFNQRPTAITLP
(restricted) Ga0247832_112427113300028557FreshwaterVDAEVTAAQAAYDALPEEQKNRPGFNQRPTAITLP
(restricted) Ga0247840_1007485413300028581FreshwaterQAIVDAEVAKAQAAYDALPAEQKTNLDRQRPTAINLP
Ga0307375_1033244813300031669SoilVDAEVTKAQAAWDALPDEQKNNGINNQRPTAITLP
Ga0315909_1040560313300031857FreshwaterAQAIVDAEVTKAQAAYDALPEEQKNRPGSNQRPTAITLP
Ga0315294_1043336913300031952SedimentAQAIVDAEVTAAQAAYDALPDEQKNRPGFNQRPTAITLP
Ga0334722_1000890413300033233SedimentIVDVEVTAAQAAWDALPDEQKQQPFNRQRPTAIVLE
Ga0334992_0534164_387_5033300033992FreshwaterQAIVDVEVTAAQAAWDALPDEQKQQPFNRQRPTAIVLE
Ga0335036_0871373_392_5143300034106FreshwaterEAQAIVDAEIATAQAAWDALPDEQKQPPIGRQRPTAIVLE
Ga0348335_046640_3_1193300034374AqueousDEAQAIVDAEVLKAQQAYDALPEEQKQIDRRPTNITLK


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