Metagenome Family F086771

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086771
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	76 residues
Representative Sequence	EGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQALK
Number of Associated Samples	102
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.82 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	96.36 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (7.273 % of family members)
Environment Ontology (ENVO)	Unclassified (38.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.00% β-sheet: 0.00% Coil/Unstructured: 49.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03781	FGE-sulfatase	44.55
PF02776	TPP_enzyme_N	14.55
PF04828	GFA	6.36
PF13379	NMT1_2	2.73
PF09084	NMT1	1.82
PF13535	ATP-grasp_4	0.91
PF00111	Fer2	0.91
PF00211	Guanylate_cyc	0.91
PF01425	Amidase	0.91
PF01957	NfeD	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	44.55
COG3791	Uncharacterized conserved protein	Function unknown [S]	6.36
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.82
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.82
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.91
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.27 %
Unclassified	root	N/A	12.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.27 %
Unclassified	root	N/A	12.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.27 %
Unclassified	root	N/A	12.73 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.36 %
Unclassified	root	N/A	12.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	61.82 %
Unclassified	root	N/A	12.73 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	61.82 %
Unclassified	root	N/A	12.73 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	61.82 %
Unclassified	root	N/A	12.73 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	61.82 %
Unclassified	root	N/A	12.73 %
Planococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	61.82 %
Unclassified	root	N/A	12.73 %
Solibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Solibacillus	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	61.82 %
Unclassified	root	N/A	12.73 %
Solibacillus silvestris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Solibacillus → Solibacillus silvestris	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100415822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	746	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100419898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300000787\|JGI11643J11755_11589131	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300000789\|JGI1027J11758_13007055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300004052\|Ga0055490_10259879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300004463\|Ga0063356_100743219	All Organisms → cellular organisms → Bacteria → Proteobacteria	1358	Open in IMG/M
3300004643\|Ga0062591_100231874	All Organisms → cellular organisms → Bacteria → Proteobacteria	1389	Open in IMG/M
3300005168\|Ga0066809_10102056	Not Available	703	Open in IMG/M
3300005213\|Ga0068998_10126337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Solibacillus → Solibacillus silvestris	593	Open in IMG/M
3300005295\|Ga0065707_10179230	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300005334\|Ga0068869_101849942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300005347\|Ga0070668_101213539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300005456\|Ga0070678_101401999	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005468\|Ga0070707_101879512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300005530\|Ga0070679_100563333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1083	Open in IMG/M
3300005536\|Ga0070697_101422825	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300005543\|Ga0070672_100794211	Not Available	833	Open in IMG/M
3300005546\|Ga0070696_100869021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	746	Open in IMG/M
3300005548\|Ga0070665_102610176	Not Available	506	Open in IMG/M
3300005549\|Ga0070704_101280188	Not Available	670	Open in IMG/M
3300005549\|Ga0070704_102225352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300005842\|Ga0068858_100951080	Not Available	841	Open in IMG/M
3300006049\|Ga0075417_10090609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1376	Open in IMG/M
3300006049\|Ga0075417_10331577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300006844\|Ga0075428_100680579	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300006847\|Ga0075431_100972572	Not Available	816	Open in IMG/M
3300006852\|Ga0075433_11566526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300006914\|Ga0075436_101283800	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300007004\|Ga0079218_10564952	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300007004\|Ga0079218_12481163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300007076\|Ga0075435_100344744	Not Available	1276	Open in IMG/M
3300007076\|Ga0075435_100370733	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300007258\|Ga0099793_10465898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300009053\|Ga0105095_10738424	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009148\|Ga0105243_11181819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300009157\|Ga0105092_10474856	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300009157\|Ga0105092_10613361	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300009168\|Ga0105104_10346992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	820	Open in IMG/M
3300009553\|Ga0105249_12096776	Not Available	638	Open in IMG/M
3300009809\|Ga0105089_1024512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	833	Open in IMG/M
3300009837\|Ga0105058_1061183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300009837\|Ga0105058_1151515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300010325\|Ga0134064_10104196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	937	Open in IMG/M
3300010358\|Ga0126370_10673208	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300010375\|Ga0105239_12765991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300010399\|Ga0134127_12949928	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300010400\|Ga0134122_11299966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300010403\|Ga0134123_11780429	Not Available	669	Open in IMG/M
3300011412\|Ga0137424_1114388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300011445\|Ga0137427_10363434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300012206\|Ga0137380_11388576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300012225\|Ga0137434_1063616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300012285\|Ga0137370_10566133	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300012482\|Ga0157318_1033800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300012914\|Ga0157297_10364971	Not Available	567	Open in IMG/M
3300012929\|Ga0137404_10091562	All Organisms → cellular organisms → Bacteria → Proteobacteria	2434	Open in IMG/M
3300012930\|Ga0137407_10887122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	843	Open in IMG/M
3300012937\|Ga0162653_100033136	Not Available	752	Open in IMG/M
3300012971\|Ga0126369_11518831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300013105\|Ga0157369_11280190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300013306\|Ga0163162_10032462	All Organisms → cellular organisms → Bacteria	5187	Open in IMG/M
3300013306\|Ga0163162_12264642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300014263\|Ga0075324_1124599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300014311\|Ga0075322_1168724	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300014324\|Ga0075352_1093826	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300014867\|Ga0180076_1054810	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300014873\|Ga0180066_1113557	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300015257\|Ga0180067_1168491	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300015264\|Ga0137403_10039019	All Organisms → cellular organisms → Bacteria → Proteobacteria	4969	Open in IMG/M
3300015359\|Ga0134085_10145174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1005	Open in IMG/M
3300015372\|Ga0132256_102648135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300015373\|Ga0132257_104204748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300016294\|Ga0182041_10676444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	913	Open in IMG/M
3300018066\|Ga0184617_1051624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1048	Open in IMG/M
3300018077\|Ga0184633_10325307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300018078\|Ga0184612_10339842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	763	Open in IMG/M
3300018082\|Ga0184639_10339186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	785	Open in IMG/M
3300018433\|Ga0066667_10806159	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300018465\|Ga0190269_11626249	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300018469\|Ga0190270_12891761	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300020003\|Ga0193739_1145592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300020006\|Ga0193735_1122714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300020197\|Ga0194128_10162477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1254	Open in IMG/M
3300025310\|Ga0209172_10383759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300025537\|Ga0210061_1080676	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300025901\|Ga0207688_10610570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300025919\|Ga0207657_10477368	Not Available	977	Open in IMG/M
3300025937\|Ga0207669_10475177	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	995	Open in IMG/M
3300025972\|Ga0207668_11166695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300025979\|Ga0210078_1053511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300026023\|Ga0207677_11756815	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300026051\|Ga0208911_1022147	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300026315\|Ga0209686_1118898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	886	Open in IMG/M
3300026326\|Ga0209801_1070801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1544	Open in IMG/M
3300026331\|Ga0209267_1136632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1022	Open in IMG/M
3300026529\|Ga0209806_1338780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300026536\|Ga0209058_1022458	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300027886\|Ga0209486_10998324	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300028379\|Ga0268266_11728084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300031231\|Ga0170824_100385843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300031847\|Ga0310907_10334402	Not Available	772	Open in IMG/M
3300031890\|Ga0306925_11100048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300031949\|Ga0214473_11921537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300031995\|Ga0307409_101299794	Not Available	752	Open in IMG/M
3300032126\|Ga0307415_102539769	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032144\|Ga0315910_10216453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1441	Open in IMG/M
3300032180\|Ga0307471_101905793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	744	Open in IMG/M
3300032205\|Ga0307472_101058776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	764	Open in IMG/M
3300034147\|Ga0364925_0217882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300034148\|Ga0364927_0208477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.91%
Host-Associated	Host-Associated	29.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.73%
Plants	Host-Associated → Plants	29.09%
Aquatic	Environmental → Aquatic	18.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Sediment	Environmental → Aquatic → Sediment	9.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Freshwater	Environmental → Aquatic → Freshwater	4.55%
Marine	Environmental → Aquatic → Marine	3.64%
Floodplain	Environmental → Terrestrial → Floodplain	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.27%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.64%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.64%
Sand	Environmental → Terrestrial → Soil → Sand	2.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.64%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.27%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.64%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.73%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.91%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014867	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10D	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025979	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026051	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1004158222	3300000364	Soil	RRMLKAMTRALQYIQDNPEGTQQVMLSWLKIDREMAADIYQMARNNYTKNGLVEESTLNSLVTATLAEAGIKNVSPSQLVDFSLLQQVLK*
INPhiseqgaiiFebDRAFT_1004198982	3300000364	Soil	EQPDQVRRMLKAMTQALQYIQNNPEGTQQVMLSWLKIDREMATDIYQMAVNNYTKNGIVEESMMNPLVTTMLAEASIKNVSPSQLVDFSLLHQVLK*
JGI11643J11755_115891313	3300000787	Soil	LDREMAADIYKLAVNNYTKNGMVEETMLNSLVTAMLAEAGIKNVAPSQLVDFTLLQQALK
JGI1027J11758_130070551	3300000789	Soil	MLKAMTQALRYMQDNPEGTQQVMMSWLKLDREMAADIYQMARNNYTKTGMVEESMLNSLVTAMLAEAGIKGVNVSQLTDFSLLHQALK*
Ga0055490_102598791	3300004052	Natural And Restored Wetlands	YVQENPEGTQQVMMNWLKLDREMAADIYQMARNNYTKNGTVEEATMNSLVTAMLGEAGIKNVTPSQLVDFTLLQQALK*
Ga0063356_1007432193	3300004463	Arabidopsis Thaliana Rhizosphere	EMAADIYQMSINNYTRNGMVDEATMNSLVGSMLADAGIKGATPSQLTDFTLLQQALK*
Ga0062591_1002318743	3300004643	Soil	LRYLRENSEGTQQTMMTWLKLDREMAADIYQMAINNYTRNGMVEEATMNSLVTSMLAEAGIKGVAPSQLTDFTLLQQALK*
Ga0066809_101020562	3300005168	Soil	DNPEGTQQVMMSWLKLDREMAADIYQMARNNYTKNGMVEESMLNSLVTAMLAEAGIKGVNVSQLTDFSLLHQALK*
Ga0068998_101263371	3300005213	Natural And Restored Wetlands	DQIRRMLKAMTQALKYIQDNPEGTQQVMISWLKIDREMAADIYQMARNNHTKDGMVEEATLNSLVTAMLAEAGIKGVNVSQLVDFSLLQQALK*
Ga0065707_101792303	3300005295	Switchgrass Rhizosphere	KAMTQALKYIQDNPEGTQQVMMSWLKIDREMAADIYQMARNNYTKNGMVEESTLNSLVTTMLAEAGIKNVTPSQLVDFSLLQQALK*
Ga0068869_1018499421	3300005334	Miscanthus Rhizosphere	YIQENPEGTQQVMMNWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQVLK*
Ga0070668_1012135391	3300005347	Switchgrass Rhizosphere	QQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQALK*
Ga0070678_1014019992	3300005456	Miscanthus Rhizosphere	EGTQQVMMNWLKIERDIAADIYDLAKNNYTRNGLLEDSAMNPLVTQMLAEANIKGVSPSQLVDFSLLQQVLK*
Ga0070707_1018795122	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LKAMVQALKYIHENPEGTQQVMTSWLKIDREMAAEIYQMSVNNFTRAGTVEESTVNALVERLLADAGIKNVHLSQLTDFAPLQQVLKQF*
Ga0070679_1005633332	3300005530	Corn Rhizosphere	QVLRMLKAMTRALKYIQENPEGTQQVMMNWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQVLK*
Ga0070697_1014228252	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KLDREMAADIYQMAKDNYTKNGMVDEPTLNSLVGAMLAEAGIKNVAPTQLVDFSLLQQTLK*
Ga0070672_1007942111	3300005543	Miscanthus Rhizosphere	SWLKLDREMAADIYQMAKNNYTKNGMVDEPTLNSLVTTMLAEAGIKNAAPSQLVDFSLLQQVLK*
Ga0070696_1008690212	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LRYMQENPEGTQQVMMSWLKLDREMAADIYQMAKNNYAKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQALK*
Ga0070665_1026101762	3300005548	Switchgrass Rhizosphere	GTQQAMMTWLKLERDMAADIYQMAINNYTRNGMVEEAMLNSLVTNMLAEAGIKGVAPSQLTDFTLLQQASSK*
Ga0070704_1012801881	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RFIQENPEGTQQVMMSWLKLDREMAADIYQMAKNNYTKTGMVDEPTLNLLVTTMLAEAGIKNAAPSQLVDFSLLQQVLK*
Ga0070704_1022253521	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQALK*
Ga0068858_1009510801	3300005842	Switchgrass Rhizosphere	NPEGTQQIMMSWLKLDREMAADIYQMAKNNYTKNGMVDEPTLNSLVTTMLAEAGIKNAAPSQLVDFSLLQQVLK*
Ga0075417_100906091	3300006049	Populus Rhizosphere	DNPEGTQQVMMSWLKIDREMAADIYQMARNNYTKNGMVDEPTLNSLVTTMLAEAGVKGVTPSQLVDFSLLHQVLK*
Ga0075417_103315771	3300006049	Populus Rhizosphere	TQQVMMNWLKLDREMAADIYQMAKNNYTKNGMVEEATLNSLVTTMLAETGIKNVNVSQLVDFTLLQQALK*
Ga0075428_1006805791	3300006844	Populus Rhizosphere	MMNWLKLDREMAADIYKLAVNNYTKNGMVEETMLNLLVTAMLAEAGIKNVAPSQLVDFTLLQQALK*
Ga0075431_1009725721	3300006847	Populus Rhizosphere	ALKYIQDNPEGTQQVMMSWLKIDREMAADIYQMARNNYTKNGMVDEPTLNSLVTTMLAEAGVKGVTPSQLVDFSLLHQVLK*
Ga0075433_115665261	3300006852	Populus Rhizosphere	QVMMSWLKIDREMAADIYQMARNNYTKNGMVEESMLNSLVTTMLAEAGIKGVNISQLVDFSLLQQVLK*
Ga0075436_1012838002	3300006914	Populus Rhizosphere	QALKYIQDNPEGTQQVMMSWLKLDREMAADIYQMARNNYTKNGMVEESMLNSLVTAMLAEAGIKGVNVSQLTDFSLLNQALK*
Ga0079218_105649522	3300007004	Agricultural Soil	EGTQQVMVSWLKLDRDMAGAIYQMAINNYTKNGMLEESMLNSLVTTMLAETGIKGINVSQLTDFSLLRQVLK*
Ga0079218_124811631	3300007004	Agricultural Soil	QVMMSWLKLDGEMAAEIYQMAINNYTRNGMVEESMLNSLVTTMLAEAGIKGVAPSQLTDFTLLQQALK*
Ga0075435_1003447441	3300007076	Populus Rhizosphere	KIDREMAADIYQMARNNYTKNGMVDEPTLNSLVTTMLAEAGVKGVTPSQLVDFSLLHQVLK*
Ga0075435_1003707331	3300007076	Populus Rhizosphere	RYIHENPEGTQQVMMNWLKLDREMAVDIYQMAKDNYTKNGMVDEPTLNSLVGTMLAEAGIKNVAPSQLVDFTLLQQALK*
Ga0099793_104658981	3300007258	Vadose Zone Soil	MMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQTLK*
Ga0105095_107384242	3300009053	Freshwater Sediment	QVMMNWLKLDREMAADIYQMAKDNYTKNGMVEEAMLNSLVTTMLAEAGIKNVTPSQLVDFTLLQQALK*
Ga0105243_111818191	3300009148	Miscanthus Rhizosphere	MLKAMTQALRYMQENPEGTQQVMISWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFSLLQQALK*
Ga0105092_104748562	3300009157	Freshwater Sediment	QALKYIQDNPEGTQQVMANWLKLDREMAADIYKLAVNNYTKNGMVEESMLNSLVTTMLAEAGIKNVIPSQLVDFTLLQQALK*
Ga0105092_106133611	3300009157	Freshwater Sediment	LKYVQDNPEGTQQVMMSWLKIDREMAAEIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGVKNVTPSQLVDFSLLHQVLK*
Ga0105104_103469921	3300009168	Freshwater Sediment	LKLDREMAADIYQMARNNYTKSGMVDELTLNSLVTTMLAETGIKGVTPSQLTDFSLLQQALK*
Ga0105249_120967762	3300009553	Switchgrass Rhizosphere	GTQQVMMNWLKLDREMAAEIYQMAINNYTRNGMVEESMLNSLVTTMLAEAGIKGVAPSQLTDFTLLQQALK*
Ga0105089_10245121	3300009809	Groundwater Sand	VKLDREMAADIYQMARNNYTKNGMVDEPTLNSLVTTMLAEAGIKGVTPSQLTDFSLLQQALK*
Ga0105058_10611831	3300009837	Groundwater Sand	QVRRMLKAMTQALKYIQDNPEGTQQVMMNWLKLDREMAADIYQMARNNYTKNGMVDEPTLNSLVTTMLAEAGIKAVTPSQLTDFSLLHQALK*
Ga0105058_11515152	3300009837	Groundwater Sand	MMNWLKLDREMAADIYQMARNNYTKNGMVDEPTLNSLVTTMLAEAGIKGVTPSQLTDFSLLQQVLK*
Ga0134064_101041962	3300010325	Grasslands Soil	KAMAQALRYMQENPEGMQQVMMSWLKIDREMAADIYRMSINNYTKNGTLDESTLNALVTSMLAEAGITNVNVSQLVDFSLLHQALK*
Ga0126370_106732081	3300010358	Tropical Forest Soil	EGTQQVMMSWLKIDREMAADIYQMAKNNYTKNGMVEESTLNSLVTTMLAEAGIKNVTPSQLVDFSLLQQALK*
Ga0105239_127659912	3300010375	Corn Rhizosphere	GTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQVLK*
Ga0134127_129499281	3300010399	Terrestrial Soil	VMANWLKIDREMAADIYQMSVNNYTKNGLLDESTLNSLVTSMLAEAGIKNVTPAQLVDFSLLQQVIK*
Ga0134122_112999662	3300010400	Terrestrial Soil	MLKAMTQALRYMQENPEGTQQVMISWLKLDREMAADIYQMAKNNYTKNGLVEESMLNSLVTTMLAEAGIKNVAPTQLVDFSLLQQALK*
Ga0134123_117804291	3300010403	Terrestrial Soil	IMMSWLKLDREMAADIYQMAKNNYTKNGMVDEPTLNSLVTTMLAEAGIKNAAPSQLVDFSLLQQVLK*
Ga0137424_11143881	3300011412	Soil	NPEGTQQIMMSWLKLDREMAAEIYQMAINNYTRNGMVEDSMLNSLVTTMLAEAGIKGVAPSQLTDFTLLQQALK*
Ga0137427_103634342	3300011445	Soil	TQQVMMSWLKLDREMAADIYQLAINSYTKNGMVEESMLNALVTSMLAEAGIKGVNVSQLTDFTLLQQVLK*
Ga0137380_113885762	3300012206	Vadose Zone Soil	SQALKYIQDNPEGTQQVMMSWLKLDREMAADIYQMARNNYTKNGMVEDATLNSLVTTMLAEAGIKNVNVPQLVDFSLLQQVLK*
Ga0137434_10636161	3300012225	Soil	EGTQQVMMSWLKLDREMAADIYQMAINSYTKNGMVEESMLNSLVTTMLAEAGIKGVAPSQLTDFTLLQQALK*
Ga0137370_105661332	3300012285	Vadose Zone Soil	LKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFSLLQQALK*
Ga0157318_10338001	3300012482	Arabidopsis Rhizosphere	ENPEGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQALK*
Ga0157297_103649712	3300012914	Soil	ENPEGTQQAMMTWLKLERDMAADIYQMAINNYTRNGMVEEAMLNSLVTNMLAEAGIKGVAPSQLTDFTLLQQALK*
Ga0137404_100915625	3300012929	Vadose Zone Soil	KYIQDNPEGTQQVMMSWLKLDREMAADIYQMAKDNYTKNGMVDEPTLNSLVTAMLAEAGIKNANVPQLVDFSLLQQVLK*
Ga0137407_108871221	3300012930	Vadose Zone Soil	MLKAMSQALKYIQDNPEGTQQVMMNWLKLDREMAADIYQMAKDNYTKNGMVDEPTLNSLVTAMLAEAGIKNVNVSQLVDFSLLQQVLK*
Ga0162653_1000331362	3300012937	Soil	VMMSWLKLDREMAADIYQMARNNYTKTGMVEESMLNSLVTAMLAEAGIKGVNVSQLTDFSLLHQALK*
Ga0126369_115188312	3300012971	Tropical Forest Soil	MLKAMTQALKYVQDDPEGTQQVMMSWLKIDREMAADIYQMARNNYTKNGMVEESMLNSLVTTMLAEAGIKNVSPSQLVDLSLLQQALK*
Ga0157369_112801901	3300013105	Corn Rhizosphere	KLEREMAADIYQMAKDNYTKNGMVDEPTLNSLVGAMLAEAGIKNVAPTQLVDFSLLQQALK*
Ga0163162_100324622	3300013306	Switchgrass Rhizosphere	MLKAMTQALRYIQENPEGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFSLLQQALK*
Ga0163162_122646421	3300013306	Switchgrass Rhizosphere	SWLKLDREMAADIYQMAKNNYTKNGLVEESMLNSLVTTMLAEAGIKNVAPTQLVDFSLLQQALK*
Ga0075324_11245991	3300014263	Natural And Restored Wetlands	LKYVQENPEGKQQVMMNWLKLDRDMAADIYQMARNNYTKNGMVEEGMMNSLVTAMLAEAGIKNVTVSQLTDFSLLQQALK*
Ga0075322_11687241	3300014311	Natural And Restored Wetlands	KLDREMAADIYQMSKNNFTKDGMVDDSMLNSLVTTMLGEAGIKNVAPTQLVDFSLLHQVLK*
Ga0075352_10938262	3300014324	Natural And Restored Wetlands	IDKEMAADIYQMSINNYTRNGMVDEATMNSLVGSMLADAGIKGATPSQLTDFTLLQQALKQPQ*
Ga0180076_10548101	3300014867	Soil	QESPEGTQQVMMNWLKLDREMASDIYQMARNNYTKNGMVEEATMNSLVTAMLAEAGIKNIAPSQLVDFTLLQQALK*
Ga0180066_11135571	3300014873	Soil	LKYIQDSPEGTQQVMMSWLKLDRDMAADIYQMARNSYTKNGMVDEPTLNTLVTSMLAEAGIKNVLPSQLKDFSLLQQALR*
Ga0180067_11684912	3300015257	Soil	RENPEGTQQIMMSWLKLDREMAAEIYQMAINNYTRNGMVEESMLNSLVTAMLAEAGIKGVAPSQLTDFTLLQQALK*
Ga0137403_100390191	3300015264	Vadose Zone Soil	GTQQVMMNWLKLDREMAADIYQMARNNYTKNGMVEDATLNSLVTTMLAEAGIKNVNVPQLVDFSLLQQVLK*
Ga0134085_101451741	3300015359	Grasslands Soil	PEGMQQVMMSWLKIDREMAADIYRMSINNYTKNGTLDESTLNALVTSMLAEAGITNVNVSQLVDFSLLHQALK*
Ga0132256_1026481352	3300015372	Arabidopsis Rhizosphere	PEGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGLVEESMLNSLVTTMLAEAGIKNVAPTQLVDFSLLQQALK*
Ga0132257_1042047482	3300015373	Arabidopsis Rhizosphere	AMTQALRYMQENPEGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQVLK*
Ga0182041_106764441	3300016294	Soil	NPEGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVDEPTLNALVTAMLAEAGIKNVAPSQPVDFTLLQQALK
Ga0184617_10516241	3300018066	Groundwater Sediment	DQVLRMLKAMTRALKYIQENPEGTQQVMMNWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQSLK
Ga0184633_103253072	3300018077	Groundwater Sediment	QQVMMSWLKLDREMAAEIYQMAINNYTRNGMVEEAMLNSLVTSMLAEAGIKGVNVSQLTDFTLLQQALK
Ga0184612_103398422	3300018078	Groundwater Sediment	AMTQALRYMQDNPEGTQQVMMSWLKLDREMAADIYQMARNNYTKNGMVDEPTLNTLVTSMLAEAGIKKVTVSQLVDFSLLQQALR
Ga0184639_103391861	3300018082	Groundwater Sediment	LKYMQDNPEGTQQVMISWLKLDREMAAEIYQMAKNNYTKNGMVEESTLTTLVTTMLAEAGIKNVNVSQLVDFSLLQQALK
Ga0066667_108061592	3300018433	Grasslands Soil	EGTQQVMMSWLKLDREMAADIYQMARNNYTKNGMVEESMLNSLVTTMLAETGIKGVTPSQLTDFSLLHQALK
Ga0190269_116262491	3300018465	Soil	QIMMSWLKLDREMATDIYQMAINNYTRNGMVEEAMLQSLVTGMLAEAGIKGVAPSQLTDFTLLQQALK
Ga0190270_128917611	3300018469	Soil	MNWLKLDREMAADIYQMAKNNYTKNGMVEEAMLNSLVTTMLAEAGIKNVAPSQLVDFTLLQEALK
Ga0193739_11455921	3300020003	Soil	ALKYMQENPEGTQQVMMNWLKLDREMAAEIYQMARNNYTKNGMVDEPTLNSLVTAMLAEAGIKNVNVSQLVDFSLLQQVLK
Ga0193735_11227142	3300020006	Soil	QQVMISWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQALK
Ga0194128_101624771	3300020197	Freshwater Lake	LDREMAADIYQLAINNYTRNGMVDESMLNSLVTTMLAEAGIKGVAPSQLTDFTLLQQALK
Ga0209172_103837591	3300025310	Hot Spring Sediment	EQPDQARRVLKAMVQALRYVQENPEGAQQVMMNWLKLDREMASDIYQMAKNNYTRNGMVEEGMMNSLVTTMLAEAGIRNVAPAQLVDFALLQQALK
Ga0210061_10806761	3300025537	Natural And Restored Wetlands	WLKLDRETAAAIYQMAKNNFTKDGMVDDSMLNDLVTNMLAEAGIKNVAPTQLVDFSLLRQVIK
Ga0207688_106105702	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	QENPEGTQQIMMNWLKLDREMAADIYQMAKDNYTKNGMVDEPTLNSLVGAMLAEAGIKNVAPTQLVDFSLLQQTLK
Ga0207657_104773682	3300025919	Corn Rhizosphere	GTQQVMMSWLKLDREMAADIYQMAKNNYTKTGMVDEPTLNSLVTTMLAEAGIKNAAPSQLVDFSLLQQVLK
Ga0207669_104751771	3300025937	Miscanthus Rhizosphere	KAMTQALRYIQENPEGTQQIMMSWLKLDREMAADIYQMAKDNYTKNGMVDEPTLNSLVGAMLAEAGIKNVAPTQLVDFSLLQQTLK
Ga0207668_111666951	3300025972	Switchgrass Rhizosphere	EGTQQIMMSWLKLDREMAADIYQMAKDNYTKNGMVDEPTLNSLVGAMLAEAGIKNVAPTQLVDFSLLQQTLK
Ga0210078_10535111	3300025979	Natural And Restored Wetlands	QPDQIRRMLKAMTQALKYIQDNPEGTQQVMISWLKIDREMAADIYQMARNNHTKDGMVEEATLNSLVTAMLAEAGIKGVNVSQLVDFSLLQQALK
Ga0207677_117568152	3300026023	Miscanthus Rhizosphere	ENPEGTQQIMMSWLKLDREMAADIYQMAKDNYTKNGMVDEPTLNSLVGAMLAEAGIKNVAPTQLVDFSLLQQALK
Ga0208911_10221471	3300026051	Natural And Restored Wetlands	YMQENPEGTQQVMMNWLKLDRETAAAIYQMAKNNFTKDGMVDDSMLNDLVTNMLAEAGIKNVAPTQLVDFSLLRQVIK
Ga0209686_11188982	3300026315	Soil	KAMAQALRYMQENPEGMQQVMMSWLKIDREMAADIYRMSINNYTKNGTLDESTLNALVTSMLAEAGITNVNVSQLVDFSLLHQALK
Ga0209801_10708014	3300026326	Soil	MAQALRYMQENPEGMQQVMMSWLKIDREMAADIYRMSINNYTKNGTLDESTLNALVTSMLAEAGITNVNVSQLVDFSLLHQALK
Ga0209267_11366321	3300026331	Soil	ALRYMQENPEGMQQVMMSWLKIDREMAADIYRMSINNYTKNGTLDESTLNALVTSMLAEAGITNVNVSQLVDFSLLHQALK
Ga0209806_13387802	3300026529	Soil	IQENPEGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFSLLQQVLK
Ga0209058_10224581	3300026536	Soil	SWLKIDREMAADIYRMSINNYTKNGTLDESTLNALVTSMLAEAGITNVNVSQLVDFSLLHQALK
Ga0209486_109983242	3300027886	Agricultural Soil	MVSWLKLDRDMAGAIYQMAINNYTKNGMLEESMLNSLVTTMLAETGIKGINVSQLTDFSLLRQVLK
Ga0268266_117280841	3300028379	Switchgrass Rhizosphere	QALRYMRENPEGTQQAMMTWLKLERDMAADIYQMAINNYTRNGMVEEAMLNSLVTNMLAEAGIKGVAPSQLTDFTLLQQASSK
Ga0170824_1003858432	3300031231	Forest Soil	MMTWLKLDREMAADIYQMARNNYTKNGMVEESMLNSLVTAMLAEAGIKGVNVSQLVDFSLLQQILK
Ga0310907_103344022	3300031847	Soil	KYIQDDPEGTQQVMMSWLKIDREMAADIYQMAKNNYTKNGLVEESMLDSLVTAMLAEAGIKGVNVSQLTDFSLLHQALK
Ga0306925_111000482	3300031890	Soil	VQALKYIHENPQGTQQVMTSWLKIDREMAADIYQMSVNNFTQNGTVEESTMNALVERLLADAGIKSVPLSQLTDFAPLQQVLKQF
Ga0214473_119215371	3300031949	Soil	EGTQQVMMSWLKLDRDMAADIYQMARNSYTKNGMVDEPTLNTLVTSMLAEAGIKNVTVSQLVDFSLLQQALK
Ga0307409_1012997942	3300031995	Rhizosphere	AMLQALRYLRENPEGTQQAMMTWLKLERDMAADIYQMAINNYTRNGMVEEAMLNSLVTNMLAEAGIKGVAPSQLTDFTLLQQALK
Ga0307415_1025397692	3300032126	Rhizosphere	SWLKLDRDMAGAIYQMAINNYTKNGMLEESMLNSLVTTMLAETGIKGINVSQLTDFSLLRQVLK
Ga0315910_102164531	3300032144	Soil	NPEGTQQVMMNWLKLDREMAADIYQMAKNNYTKNGMVEEAMLNSLVTAMLGEAGIKNVTPSELVDFTLLQQALK
Ga0307471_1019057931	3300032180	Hardwood Forest Soil	QENPEGTQQVMMSWLKLDREMAADIYQMAKNNYTKNGMVEESMLNSLVTTMLAEAGIKNVAPTQLVDFTLLQQALK
Ga0307472_1010587762	3300032205	Hardwood Forest Soil	KAMTRALKYIQVNPEGTQQVMMNWLKLDHEMAADIYQMAVNNYTKNGMVEESMLNSLVTSMLAEAGIKNVAPSQLVDFSLLQQTLK
Ga0364925_0217882_3_251	3300034147	Sediment	QALRYLRENPEGTQQAMMTWLKLDREMAAEIYQLAINNYTRNGMVEESMLNSLVTTMLAEAGIKGVAPSQLTDFTLLQQALK
Ga0364927_0208477_1_198	3300034148	Sediment	MSWLKLDREMAAEIYQMAINNYTRNGMVEDSMLNSLVTTMLAEAGIKGVAPSQLTDFTLLQQALK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086771

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences