Metagenome / Metatranscriptome Family F086767

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086767
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	115 residues
Representative Sequence	MVAVSRLLVALAMAGLFTQPIYADVIPTRRAADTTESAKKVETRLVQLGVTADAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGVAVLIIVATD
Number of Associated Samples	83
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.09 %
% of genes near scaffold ends (potentially truncated)	26.36 %
% of genes from short scaffolds (< 2000 bps)	75.45 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.454 % of family members)
Environment Ontology (ENVO)	Unclassified (29.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.94% β-sheet: 0.00% Coil/Unstructured: 44.06%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02568	ThiI	23.64
PF14559	TPR_19	4.55
PF13414	TPR_11	3.64
PF13231	PMT_2	3.64
PF03412	Peptidase_C39	2.73
PF02481	DNA_processg_A	2.73
PF13529	Peptidase_C39_2	1.82
PF00392	GntR	1.82
PF13490	zf-HC2	1.82
PF03054	tRNA_Me_trans	0.91
PF13374	TPR_10	0.91
PF02897	Peptidase_S9_N	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	24.55
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	23.64
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	23.64
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	23.64
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	5.45
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.91
COG1770	Protease II	Amino acid transport and metabolism [E]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	90.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	90.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	90.00 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	90.00 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	90.00 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	90.00 %
unclassified Thioalkalivibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	90.00 %
Thioalkalivibrio sp. ALJ16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio → Thioalkalivibrio sp. ALJ16	0.91 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111006\|2214926874	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	544	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105850436	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	592	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105850539	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2642	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105853231	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1766	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105853406	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2724	Open in IMG/M
3300000955\|JGI1027J12803_104430009	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2120	Open in IMG/M
3300003319\|soilL2_10266336	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1093	Open in IMG/M
3300004103\|Ga0058903_1511444	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	877	Open in IMG/M
3300004114\|Ga0062593_103512755	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	503	Open in IMG/M
3300004139\|Ga0058897_10913604	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	546	Open in IMG/M
3300004463\|Ga0063356_100067826	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3694	Open in IMG/M
3300004479\|Ga0062595_101274569	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	659	Open in IMG/M
3300005365\|Ga0070688_100755646	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	757	Open in IMG/M
3300005438\|Ga0070701_10387072	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	883	Open in IMG/M
3300005440\|Ga0070705_101223511	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	620	Open in IMG/M
3300005441\|Ga0070700_101190343	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	636	Open in IMG/M
3300005444\|Ga0070694_100662592	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	846	Open in IMG/M
3300005456\|Ga0070678_100542704	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1031	Open in IMG/M
3300005471\|Ga0070698_100063723	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3717	Open in IMG/M
3300005529\|Ga0070741_11195716	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005536\|Ga0070697_100559435	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1003	Open in IMG/M
3300005537\|Ga0070730_10008894	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	8383	Open in IMG/M
3300005538\|Ga0070731_10002814	All Organisms → cellular organisms → Bacteria	16213	Open in IMG/M
3300005538\|Ga0070731_10035927	All Organisms → cellular organisms → Bacteria	3336	Open in IMG/M
3300005538\|Ga0070731_10172419	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1436	Open in IMG/M
3300005607\|Ga0070740_10332840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio → Thioalkalivibrio sp. ALJ16	601	Open in IMG/M
3300005615\|Ga0070702_101391396	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	573	Open in IMG/M
3300005764\|Ga0066903_101502408	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1272	Open in IMG/M
3300005829\|Ga0074479_10096303	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	771	Open in IMG/M
3300005836\|Ga0074470_11271842	All Organisms → cellular organisms → Bacteria	35789	Open in IMG/M
3300006046\|Ga0066652_100129193	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2088	Open in IMG/M
3300006046\|Ga0066652_100249269	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1554	Open in IMG/M
3300006844\|Ga0075428_101258142	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	779	Open in IMG/M
3300006845\|Ga0075421_102488909	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	540	Open in IMG/M
3300006846\|Ga0075430_101117817	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	649	Open in IMG/M
3300006852\|Ga0075433_10923474	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	761	Open in IMG/M
3300009012\|Ga0066710_101015941	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1280	Open in IMG/M
3300009094\|Ga0111539_10081561	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3804	Open in IMG/M
3300009100\|Ga0075418_11985036	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	634	Open in IMG/M
3300009137\|Ga0066709_100944412	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1259	Open in IMG/M
3300009146\|Ga0105091_10004077	All Organisms → cellular organisms → Bacteria	6258	Open in IMG/M
3300009156\|Ga0111538_10010113	All Organisms → cellular organisms → Bacteria	12561	Open in IMG/M
3300009609\|Ga0105347_1146622	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	920	Open in IMG/M
3300010397\|Ga0134124_10059573	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3229	Open in IMG/M
3300010398\|Ga0126383_12826804	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	567	Open in IMG/M
3300010399\|Ga0134127_10306219	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1533	Open in IMG/M
3300010399\|Ga0134127_11997168	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	658	Open in IMG/M
3300010399\|Ga0134127_12316003	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	616	Open in IMG/M
3300010400\|Ga0134122_10024915	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	4503	Open in IMG/M
3300010400\|Ga0134122_10029465	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	4147	Open in IMG/M
3300010400\|Ga0134122_10482927	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1117	Open in IMG/M
3300010401\|Ga0134121_10001283	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	23900	Open in IMG/M
3300010401\|Ga0134121_10115617	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2262	Open in IMG/M
3300010401\|Ga0134121_11047616	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	804	Open in IMG/M
3300010403\|Ga0134123_10056114	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2984	Open in IMG/M
3300010403\|Ga0134123_10240337	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1569	Open in IMG/M
3300010403\|Ga0134123_10472642	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1172	Open in IMG/M
3300011120\|Ga0150983_14352109	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	753	Open in IMG/M
3300011443\|Ga0137457_1094841	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	940	Open in IMG/M
3300011445\|Ga0137427_10077847	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1326	Open in IMG/M
3300012212\|Ga0150985_117291762	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	917	Open in IMG/M
3300012469\|Ga0150984_107302239	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1462	Open in IMG/M
3300012469\|Ga0150984_114054101	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	831	Open in IMG/M
3300012469\|Ga0150984_118137241	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	845	Open in IMG/M
3300012944\|Ga0137410_10000362	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	31844	Open in IMG/M
3300012971\|Ga0126369_11953337	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	675	Open in IMG/M
3300016404\|Ga0182037_12018293	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	518	Open in IMG/M
3300017965\|Ga0190266_10125110	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1108	Open in IMG/M
3300017965\|Ga0190266_10313776	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	825	Open in IMG/M
3300019360\|Ga0187894_10155436	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1157	Open in IMG/M
3300021478\|Ga0210402_11703812	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	557	Open in IMG/M
3300022525\|Ga0242656_1101416	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	564	Open in IMG/M
3300025922\|Ga0207646_10396639	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1246	Open in IMG/M
3300026075\|Ga0207708_11569323	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	578	Open in IMG/M
3300026121\|Ga0207683_10203541	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1800	Open in IMG/M
3300027675\|Ga0209077_1012654	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2230	Open in IMG/M
3300027857\|Ga0209166_10105298	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1570	Open in IMG/M
3300027869\|Ga0209579_10001982	All Organisms → cellular organisms → Bacteria	16232	Open in IMG/M
3300027869\|Ga0209579_10145732	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1261	Open in IMG/M
3300027907\|Ga0207428_10795925	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	672	Open in IMG/M
3300027909\|Ga0209382_12165033	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	527	Open in IMG/M
3300030740\|Ga0265460_13028257	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	506	Open in IMG/M
3300031093\|Ga0308197_10141487	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	763	Open in IMG/M
3300031094\|Ga0308199_1189442	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	512	Open in IMG/M
3300031099\|Ga0308181_1035212	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	888	Open in IMG/M
3300031421\|Ga0308194_10169032	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	687	Open in IMG/M
3300031421\|Ga0308194_10244122	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	600	Open in IMG/M
3300031716\|Ga0310813_10000250	All Organisms → cellular organisms → Bacteria	38512	Open in IMG/M
3300031716\|Ga0310813_10001552	All Organisms → cellular organisms → Bacteria	13864	Open in IMG/M
3300031716\|Ga0310813_10002278	All Organisms → cellular organisms → Bacteria	11664	Open in IMG/M
3300031716\|Ga0310813_10369018	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1227	Open in IMG/M
3300031716\|Ga0310813_11212335	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	695	Open in IMG/M
3300031716\|Ga0310813_11918176	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	558	Open in IMG/M
3300031716\|Ga0310813_12118721	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	531	Open in IMG/M
3300031718\|Ga0307474_10383179	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1092	Open in IMG/M
3300031740\|Ga0307468_102180188	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	535	Open in IMG/M
3300031754\|Ga0307475_10352030	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1183	Open in IMG/M
3300031858\|Ga0310892_10624821	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	732	Open in IMG/M
3300031912\|Ga0306921_10128800	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2954	Open in IMG/M
3300031962\|Ga0307479_10257442	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1724	Open in IMG/M
3300032163\|Ga0315281_10099440	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3377	Open in IMG/M
3300032421\|Ga0310812_10095467	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1216	Open in IMG/M
3300032421\|Ga0310812_10190455	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	886	Open in IMG/M
3300032421\|Ga0310812_10347964	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	663	Open in IMG/M
3300034479\|Ga0314785_018396	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	559	Open in IMG/M
3300034660\|Ga0314781_140381	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	516	Open in IMG/M
3300034662\|Ga0314783_059406	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	739	Open in IMG/M
3300034664\|Ga0314786_075923	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	683	Open in IMG/M
3300034665\|Ga0314787_072178	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	602	Open in IMG/M
3300034668\|Ga0314793_050241	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	763	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.55%
Host-Associated	Host-Associated	15.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.27%
Plants	Host-Associated → Plants	15.45%
Aquatic	Environmental → Aquatic	7.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.91%
Sediment	Environmental → Aquatic → Sediment	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Freshwater	Environmental → Aquatic → Freshwater	2.73%
Cave	Environmental → Terrestrial → Cave	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.64%
Loam	Environmental → Terrestrial → Soil → Loam	12.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.18%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	11.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.82%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2213988108	2209111006	Arabidopsis Rhizosphere	MVGLSRFILAFAVVGLFAQHLYADVIPSRRAADTSDSSQKIQTRLVQLGLTADAAKDQAQKLTVEQTKYFAANVDRIQLAGQGENWGGQSDNLWWEWLFGI
INPhiseqgaiiFebDRAFT_1058504361	3300000364	Soil	MVAVGRLLVAVALAGLFTPSLYADVIPTRRAGDTSESALKVENRLVQLGVPATAAREQIQKLTDEQTHYFAGNPERIQLVGQENWGGQSDNLWWEWVFGIAALAGAVVIIMLAASN*
INPhiseqgaiiFebDRAFT_1058505393	3300000364	Soil	MVXVGRLLXAVAXAGXXXXXLXADVXPTRRAGXTXXSXXKVXXRLVXLGVXXXAAXEQXQXLTDXQTXYFAGNPXRXXLVGQENWGGQSDNLWWEWVFGLAALAGAVVIIVVALD*
INPhiseqgaiiFebDRAFT_1058532312	3300000364	Soil	MVGVGRLLVAFAVVGLFAQHLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQVQKLNVDQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWLFGIGALLVAGAVIVIALQN*
INPhiseqgaiiFebDRAFT_1058534063	3300000364	Soil	MVVVGRLLLAVALAGFLSQPLYADVIPTRRAGDTTESSQKVEQRLVELGVSSQAAKEQIQNLTDDQTNYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGAVVIIVVALD*
JGI1027J12803_1044300094	3300000955	Soil	MVGVGRLLVAFAVVGLFAQHLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQVQKLNVDQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWLFGIGALL
soilL2_102663361	3300003319	Sugarcane Root And Bulk Soil	MVRVSRLLVAFAVTGLFAQHLYADVIPSRRAADTSDASQKITGRLVELGLTADAAKEQAQKLSVDQTKYFAANLDRIQLVGQGENWGGQSDNLWWEWLFGIGALLVAGAVVVIALND*
Ga0058903_15114442	3300004103	Forest Soil	MVAVSRLLVAVAMAGLFTQSLHADVIPTRRAADTTESAQKVEGRLVQLGVTSEAARQQIQNLTDEQTHYFAGNPERIQLVGQENWGGQSDNLWWEWVFGIVALVAVVAFIAFEVGNN*
Ga0062593_1035127551	3300004114	Soil	MVAVSRLLVALAMAGLFTQPIYADVIPTRRAADTTESAKKVETRLVQLGVAADAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGVAVLIIVATD*
Ga0058897_109136041	3300004139	Forest Soil	LLVAVAMAGLFSQPVYADIIPTRRAGDSAESSRKVESRLVQLGVSSEAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWLLGTAALVAVVGFIIWDIGNN*
Ga0063356_1000678266	3300004463	Arabidopsis Thaliana Rhizosphere	MVGISRLLVAFAVTGLFAQHLYADVIPTRRAADTSDSSQKIQTRLVELGLTADAAKEQTQKLNVDQTKYFAANLDRIQLVGQGENWGGQSDNLWWEWVFGIGILIVAGAVIVIALND*
Ga0062595_1012745691	3300004479	Soil	MVGVSRLLVALAVSGLLTSPLYADVIPTRRAGETSESSKKVESRLLQLGVSADAAKDQVTNLTDEQTRYFAADSERIQLVGQENWGGQSDNLWWEWLFGIAALLVAGAVIVIALND*
Ga0070688_1007556462	3300005365	Switchgrass Rhizosphere	MVGVSRLLVAFAVAGLLSHPLYADVIPTRRAADTADSAKKVESRLVELGMAADDAKVQVKNLTDDQTKYFAGAPERIQLVGQENWGGQSDNLWWEW
Ga0070701_103870721	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTADSSDSSAKVQARLVELGLTADAAKDQVQKLNVEQTKYFAANTDRIQLVGQGENWGGQSDNLWWEW
Ga0070705_1012235111	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQAQKLTVEQTKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAAIVGVGIFIAIEV
Ga0070700_1011903431	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTADSSDSSAKVQARLVELGLTADAAKDQVQKLTVEQTKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAALAGAAVVLIIALND*
Ga0070694_1006625922	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MVGVSRLLVAFAVAGLLSQPLYADVIPTRRAADTKDSSQKVESRLVQLGLDADAAKEQVKSLTDDQTKYFAADSERIQLVGQENWGGQSDNLWWEWVFGILALAAVGAVILIAIDE*
Ga0070678_1005427042	3300005456	Miscanthus Rhizosphere	MVAVSRLLVALAMAGLFTQPIYADVIPTRRAADTTESAKKVETRLVQLGVTADAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGVAVLIIVATD*
Ga0070698_1000637231	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SRLLVAFAVAGLLSQPLYADVIPTRRAADTKDSSQKVESRLVQLGLDADAAKEQVKSLTDDQTKYFAADSERIQLVGQENWGGQSDNLWWEWVFGILALAAVGAVILIAIDE*
Ga0070741_111957162	3300005529	Surface Soil	MVRVGQLVVALAMMGLFTQSLHADVIPTRRAGDTSESSRKVESRLLQLGVSPDVAKEQIQKLTDEQTAYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLVALVGVGVLIVYEVNKS*
Ga0070697_1005594351	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVRVSRLVVALAVAGFLSQPLYADVIPTRRAADTADSSKKVESRLVELGVTAERAKEQTQTLNEDQTRYFAANTERIQLVGQGENWGGQSDNMWWEWVFGILAIAAAGAIILIAVHNAD*
Ga0070730_1000889410	3300005537	Surface Soil	MVAVSRLLVAVAMAGLFTQSLHADVIPTRRAADTTESAQKVESRLVQLGVTSEAARQQILNLTDDQTHYFAGNPERIQLVGQENWGGQSDNLWWE*
Ga0070731_100028146	3300005538	Surface Soil	MVAVGRLLVAVAMAGLFSQPVYADIIPTRRAGDSAESSRKVESRLVQLGVSSEAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGILALVAVGGFIVWKAGQP*
Ga0070731_100359273	3300005538	Surface Soil	MVPVGRLLVALAVMGLFTQSLHADVIPTRRAGDTSESSRKVESRLLQLGVSSEVAKEQIQKLTDEQTAYFAGNPERIQLVGQEQWGGQSDNLWWEWLFGLVFLVGVGALVAFEVNRS*
Ga0070731_101724193	3300005538	Surface Soil	MVAVGRLVVAVAMAGLFSQSLHADVIPTRRAADTRESAQKVEGRLLELGVSAEAAKEQIQNLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGIAALVAVGAFIVWEMGNN*
Ga0070740_103328401	3300005607	Surface Soil	MVRVGQLVVALAVVGLFTQSLHADVIPTRRAGDTSESSRKVESRLLQLGVSPDAAKEQIQKLTDEQTAYFAGNPERIQLVGQENWGGQSDNLWWEWLFGLVALVGVGVLIVYEVNKS*
Ga0070702_1013913961	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MVGVSRLLVALAVSGLLTSPLYADVIPTRRAGETSESSKKVESRLLQLGVSADAAKDQVTNLTDEQTRYFAADSERIQLVGQENWGGQSDNLWWEWVFGILALGGVAALIAIEVAKD*
Ga0066903_1015024081	3300005764	Tropical Forest Soil	MVGVSRLLVAFAIVGLFAQHLYADVIPSRRTADTSESSAKVQARLVELGLTADAAKEQVTKLNVEQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWLFGIAALIGGAAVIIIVATN*
Ga0074479_100963032	3300005829	Sediment (Intertidal)	RMVAVRRLLAVLAVAALFAQPLYADVIPTRRAGDASESSKKVESRLVELGVSANDAKGQVQKLTAQETKYFADSPERIQLVGQENFGGQSDNLWWEWLFGIVALVGGALVIYFVLANNGF
Ga0074470_1127184234	3300005836	Sediment (Intertidal)	MVAVSRLLVALAFAGFIAPPLYADVIPTRRAVDTTDSAKKVESRLVQLGVSADSAKEQIQKLTDDQTTYFAGNPERIQLVGQENFGGQSDNLWWEWVFGLAALGGVAAFIVIEVGK*
Ga0066652_1001291933	3300006046	Soil	MVVVGRLLLAVALAGFLSQPLYADVIPTRRAGDTTESSQKVEQRLVDLGVSSQAAKEQIQKLTDDQTNYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGAVVIIVVALD*
Ga0066652_1002492692	3300006046	Soil	MVGVSRLLVALAVSGLLTSPLYADVIPTRRAGETSESSKKVESRLLQLGVSADTAKDQVTNLTDEQTRYFAADSERIQLVGQENWGGQSDNLWWEWVFGILALGGVAALIAIEVAKD*
Ga0075428_1012581421	3300006844	Populus Rhizosphere	LLVALALVGLFAQPLYADVIPTRRAGDTKESSQKVQTRLVELGMTADAAKDQVQQLTAEQTKYFAGNPGRIQLVGQAENFGGQSDNMWWEWVFGLAFLAVGVGIIIIVAD*
Ga0075421_1024889092	3300006845	Populus Rhizosphere	MVGASRLLVALALVGLFAQPLYADVIPTRRAGDTKESSQKVQTRLVELGMTADAAKDQVQQLTAEQTKYFAGNPGRIQLVGQAENFGGQSDNMWWEWVFGLAFLAVGVGIIIIVAD*
Ga0075430_1011178172	3300006846	Populus Rhizosphere	MVGASRLLVALAAAGLFAQPLYADVIPTRRAGDTKESSQKVQTRLVELGMTADAAKDQVQQLTTEQTKYFAGNPGRIQLVGQAENFGGQSDNMWWEWVFGIAMLAVGVGVIIIVAD*
Ga0075433_109234742	3300006852	Populus Rhizosphere	MVGLSRFILAFAVVGLFAQHLYADVIPSRRAADTSDSSQKIQTRLVQLGLTADAAKDQAQKLTVEQTKYFAANVDRIQLAGQGENWGGQSDNLWWEWLFGILALVAVAAVIIIATR*
Ga0066710_1010159412	3300009012	Grasslands Soil	MVGVSRLLVAFAVAGLCAQPLYADVIPTRRAGDTSNTSQKVESRLVQLGLSADGAKEQVQKLTDEQTKYFASSVERIQLVGQAGSENWGGQSDNLWWEWVFGILALAAAGAIILIAVNNN
Ga0111539_100815614	3300009094	Populus Rhizosphere	MVGASRLLVALALVGLFVQPLYADVIPTRRAGDAKESSQKVESRLVTLGMTSDAARDQVQQLTVEQTKYFAGNSDRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD*
Ga0075418_119850361	3300009100	Populus Rhizosphere	MVGASRLLVALALVGLFAQPLYADVIPTCRAGDTKESSQKVQTRLVELGMTADAAKDQVQQLTAEQTKYFAGNPGRIQLVGQAENFGGQSDNMWWEWVFGLAFLAVGVGIIIIVAD*
Ga0066709_1009444122	3300009137	Grasslands Soil	MVGVSRLLVAFAVAGLCAQPLYADVIPTRRAGDTSNTSQKVESRLVQLGLSADGAKEQVQKLTDEQTKYFASSVERIQLVGQAGSENWGGQSDNLWWEWVFGILALAAAGAIILIAVNNNN*
Ga0105091_100040776	3300009146	Freshwater Sediment	MVGASRLLVALALVGLFAQPLYADVIPTRRAGDAKESSQKVESRLVTLGMTADAAKDQVSQLTVDQTKYFAGNPDRIQLVAQAENFGGQSDNLWWEWVFGLAFLAVGVGVIIIVAD*
Ga0111538_100101132	3300009156	Populus Rhizosphere	VQPLYADVIPTRRAGDAKESSQKVESRLVTLGMTSDAARDQVQQLTVEQTKYFAGNSDRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD*
Ga0105347_11466222	3300009609	Soil	MVGASRLLVALALVGLFAQPLYADVIPTRRAGDAKESSQKVQTRLVELGMTADAAKDQVQQLTAEQTKYFAGNPGRIQLVGQAENFGGQSDNMWWEWVFGLAFLAVGVGVIIIVAD*
Ga0134124_100595731	3300010397	Terrestrial Soil	MVGVSRLLVAFAVVGLFAQHLYADVIPSRRTADASDSSAKVQARLVELGLTADAAKDQVQKLNVDQTKYFAANTDRIQLVGQGENFGGQSDNLWWEWLFGIAALAAAGIVIILALQN*
Ga0126383_128268041	3300010398	Tropical Forest Soil	IEEAGMVGVSRLLVALAVSGLLTSPLYADVIPTRRAGDTTDSSKKVESRLVTLGVSAEAAKDQVKNLTDDQTRYFASDLDRIQLVGQGENWGGQSDNLWWEWLFGILALGGVAAFIAIKVAQE*
Ga0134127_103062193	3300010399	Terrestrial Soil	MVRVSRLLVAFAVTGLFAQALYADVIPSRRSSETSDSSQKIQTRLVQLGLTADAAKDQAQKLTVDQSKYFAANLDRIQLVGQGENWGGQSDNLWWEWLFGIGALLVAGAVIVIALND*
Ga0134127_119971682	3300010399	Terrestrial Soil	MVGVSRLLVAFAVVGLFAQHLYADVIPSRRAADASDSSAKVQARLVELGLTADAAKDQVQKLNVEQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWLFGIGALLVAGAVIVIALND*
Ga0134127_123160031	3300010399	Terrestrial Soil	MVGVSRLLVALAVAGFLSQPLYADVIPTRRGSDAAESSKKVESRLVELGLDATVAKEQVKNLSDDQTKYFAAETDRVKLLGQGENWGGQSDNLWWEWVFGILALGAAAA
Ga0134122_100249153	3300010400	Terrestrial Soil	MVAVSRLLVAVAVAGLFSTPLYADVIPTRRAGDTTESSAKVESRLTQLGVSSEAAKDQIGKLTDDQTHYFAANPERIQLVGQENWGGQSDNLWWEWVFGLAALGGVVAFIIIEAGN*
Ga0134122_100294653	3300010400	Terrestrial Soil	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQAQKLTVEQTKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAAIVGVGIFIAIEVSN*
Ga0134122_104829272	3300010400	Terrestrial Soil	MVGVSRLLVALAVAGFLAQPLYADVIPTRRAADTTDSSKKVESRLQQLGVSADAAKEQVRNLTDDQTKYFAADSERIQLVGQENWGGQSDNMWWEWVFGILAIAAAGAIILIAVHNAD*
Ga0134121_1000128316	3300010401	Terrestrial Soil	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTANTSDSSAKVQARLVELGLTADAAKDQAQKLTVEQTKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAAIVGVGIFIAIEVSN*
Ga0134121_101156171	3300010401	Terrestrial Soil	PPIIRSLREPSAGTRLDRKRRMGMVGVSRLLVALAVAGFLAQPLYADVIPTRRAADTTDSSKKVESRLQQLGVSADAAKEQVRNLTDDQTKYFAADSERIQLVGQENWGGQSDNMWWEWVFGILAIAAAGAIILIAVHNAD*
Ga0134121_110476161	3300010401	Terrestrial Soil	MVAVSRLLVALAMAGLFTQPLYADVIPTRRASDTTQSSKKVESRLVQLGISSESAKEQIQKLTDDQTNYFAGNPERIQLVGQENWGGQSDNLWWEWLFGLAALGGVAAFIIIEVSKD*
Ga0134123_100561141	3300010403	Terrestrial Soil	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQAQKLTVEQTKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAALAGAAVVLIIALND*
Ga0134123_102403371	3300010403	Terrestrial Soil	RSNSNGPAILQEEDRMVAVSRLLALVAVASLFAQPLYADVIPTRRAGDTSESSKKVETRLVQLGVSAEDAKSQVKKLTVQETKYFADSPERIQLVGQGENFGGQSDNLWWEWVFGIAAIVGTGLLIYFVARNQ*
Ga0134123_104726421	3300010403	Terrestrial Soil	MVGVSRLLVAFAVVGLFAQHLYADVIPSRRASDTSDSSAKVQARLVELGLTADAAKDQVQKLNVEQTKYFAANTDRIQLVGQGENFGGQSDNLWWEWLFGIGALLVAGAVIVIALND*
Ga0150983_143521091	3300011120	Forest Soil	QEENRMVAVGRLLVAVAMAGLFSQPVYADIIPTRRAGDSAESSRKVESRLVQLGVSSEAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGTLALVAVVAFIIWDVGNN*
Ga0137457_10948412	3300011443	Soil	MVGASRLLVALALVSLFVQPLYADVIPTRRASDAKDTTQKVETRLVNLGLTADAARDQVQKLTVDQTRYFAENPGRIQLVGQGENFGGSSDNMWWEWVFGIGMLAIAGAI
Ga0137427_100778473	3300011445	Soil	MVGASRLLVALALVGLFAQPLYADVIPTRRAGDAKESSQKVQSRLVELGMTADAAKDQVQQLTVEQTKYFAGNPGRIQLVGQAENFGGQSDNMWWEWVFGLAFLAVGVGVIIIVAD*
Ga0150985_1172917621	3300012212	Avena Fatua Rhizosphere	RLLVALAMAGLFTQPIYADVIPTRRAADTTESAKKVETRLVQLGVTAEAAKDQIQKLTDDQTTYFAGSPERIQLVGQENWGGQSDNLWWEWVFGIAALAGAVVLMVVFLD*
Ga0150984_1073022393	3300012469	Avena Fatua Rhizosphere	MLGLASGILCGDVIPTRRAGDTTDSSAKVETRLLQLGVSADAAKEQIGKLTDDQTRYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGVAVFIIIEAGKD*
Ga0150984_1140541013	3300012469	Avena Fatua Rhizosphere	VSRLLVALAMAGLFTQPIYADVIPTRRAADTTDSARKVESRLVELGITSDAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGIAALAGVAIFIAIEAGK*
Ga0150984_1181372412	3300012469	Avena Fatua Rhizosphere	VSRLLVALAMAGLFTQPIYADVIPTRRAADTTESAKKVETRLVQLGVTAEAAKDQIQKLTDDQTTYFAGSPERIQLVGQENWGGQSDNLWWEWVFGIAALAGAVVLMVVFLD*
Ga0137410_1000036217	3300012944	Vadose Zone Soil	MLAVSRLLVALAVAGICAQPLYADVIPTRRAEDTRDASRKVESRLTQLGVSSEAAKDQLQKLTDDQTTYFAGSPERIQLVGQENFGGQSDNLWWEWVFGIAALVGVAVFIVIEVGKD*
Ga0126369_119533372	3300012971	Tropical Forest Soil	MVGVSRLLVAFAIVGLFAQHLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQVQKLNVDQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWVFGTLALVGVAAIIIIEVNK*
Ga0182037_120182931	3300016404	Soil	MVRVGRLLVAMAMAGLFTQSLHADVIPTRRAGETSESSRKVESRLLQLGVSVDSAKEQIQKLTDDQTNYFAGNPERIQLVGQENWGGQSDNLWWEWLFGLAALA
Ga0190266_101251101	3300017965	Soil	MVVVSRLLVAVALAGFLSQPLYADVIPTRRAGDTADSSQKVESRLVQLGVSSPAAKEQIQKLTDDQTHYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGAAVII
Ga0190266_103137763	3300017965	Soil	GFLSQPLYADVIPTRRAGDTTESSQKVESRLVQLGVSSPAAKEQIQKLTDDQTHYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGAAVIIVVATDN
Ga0187894_101554362	3300019360	Microbial Mat On Rocks	MVGISRLLVAFAVTGLFAQHLYADVIPSRRTADTSDSSAKVQTRLVALGLTADAARDQVQKLTVEQTKYFASNVDRIQLVGQGENFGGQSDNLWWEWLFGIAALAGAAVVIIIAVQD
Ga0210402_117038121	3300021478	Soil	MVAVSRLLVAVAMAGFFTQPLHADIIPTRRAADTSESSKKVEGRLLQLGVSSDAAKEQIQKLTDEQTNYFAGNPERIQLVGQENWGGQSDNLWWEWVFGVLALVAVGAF
Ga0242656_11014162	3300022525	Soil	MVGVSRLVVAFAVAGFLAQPLCADVIPTRRAGDTTDSSCKVQSRLVDLGLSADAAKDQVQKLTEEQTKYFAASPDRIQLVGQGENWGGQSDNLWWEWVFGIAALAAAGAIIIIAVNNSN
Ga0207646_103966391	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVGVSRLLVAFAVAGLLSQPLYADVIPTRRAADTKDSSQKVESRLVQLGLDADAAKEQVKSLTDDQTKYFAADSERIQLVGQENWGGQSDNLWWEWVFGILALAAVGAVILIAIDE
Ga0207708_115693232	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTADSSDSSAKVQARLVELGLTADAAKDQVQKLTVEQTKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAALAGAAVVLIIALND
Ga0207683_102035412	3300026121	Miscanthus Rhizosphere	MVAVSRLLVALAMAGLFTQPIYADVIPTRRAADTTESAKKVETRLVQLGVTADAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGLAALAGVAVLIIVATD
Ga0209077_10126542	3300027675	Freshwater Sediment	MVGASRLLVALALVGLFAQPLYADVIPTRRAGDAKESSRKVESRLVTLGMTADAAKDQVSQLTVDQTKYFAGNPDRIQLVAQAENFGGQSDNLWWEWVFGLAFLAVGVGVIIIVAD
Ga0209166_101052982	3300027857	Surface Soil	MVAVSRLLVAVAMAGLFTQSLHADVIPTRRAADTTESAQKVESRLVQLGVTSEAARQQILNLTDDQTHYFAGNPERIQLVGQENWGGQSDNLWWE
Ga0209579_1000198213	3300027869	Surface Soil	MVAVGRLLVAVAMAGLFSQPVYADIIPTRRAGDSAESSRKVESRLVQLGVSSEAAKDQIQKLTDDQTTYFAGNPERIQLVGQENWGGQSDNLWWEWVFGILALVAVGGFIVWKAGQP
Ga0209579_101457321	3300027869	Surface Soil	MVPVGRLLVALAVMGLFTQSLHADVIPTRRAGDTSESSRKVESRLLQLGVSSEVAKEQIQKLTDEQTAYFAGNPERIQLVGQEQWGGQSDNLWWEWLFG
Ga0207428_107959252	3300027907	Populus Rhizosphere	MVGASRLLVALALVGLFVQPLYADVIPTRRAGDAKESSQKVESRLVTLGMTSDAARDQVQQLTVEQTKYFAGNSDRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD
Ga0209382_121650331	3300027909	Populus Rhizosphere	MVGASRLLVALALVGLFAQPLYADVIPTRRAGDTKESSQKVQTRLVELGMTADAAKDQVQQLTAEQTKYFAGNPGRIQLVGQAENFGGQSDNMWWEWVFGLAFLAVGVGIIIIVAD
Ga0265460_130282571	3300030740	Soil	MLAASRLIVVLALASPFFADVIPTRRASDTTESSQKVQARLQQLGLSPDAAKEQIQNLTDGQTHYFAGSPERIQLVGQENFGGQSDNLWWEWVFGLVALAGTASIKGLSSES
Ga0308197_101414872	3300031093	Soil	MVGISRLLVAFAMAGLCSHPLYADVIPTRRAGESSDSSKKVETRLVQLGLTADAAKDQVQKLTEDQTRYFAGNSERIQLVGQENWGGQSDNLWWEWVFGIAALVGAIAIIAIAVGN
Ga0308199_11894421	3300031094	Soil	MVGVSRLLVALAVAGFLAQPLYADVIPTRRAADTTDSTRKVESRLVQLGVSADAAKEQVRNLTDDQTKYFAADSERIQLVGQENWGGQSDNMWWEWVFGILAIAAAGAIILIAVHNAD
Ga0308181_10352122	3300031099	Soil	MIAVSRLLVAVAMAGLFTQSVHADVIPTRRAGDTSESAQKVESRLVQLGVSSDAAKEQIQKLTDDQTRYFAGNPERIQLVGQENWGGQSDNLWWEWVFGIAALVGAIAVIAIAVGN
Ga0308194_101690321	3300031421	Soil	IIRVRRKVSRTGLGEPHEENRMIAVSRLLVAVAMAGLFTQSVHADVIPTRRAGDTRESAQKVESRLVQLGVSSDAAKEQIQKLTDDQTRYFAGNPERIQLVGQENWGGQSDNLWWEWVFGIAALIGAIAIIAIAAGN
Ga0308194_102441222	3300031421	Soil	MVGVSRLLVALALAGLFTQQAYADVIPTRRAADTTDSSKKVESRLVQLGVAATEAKTQVQNLTDDQAKYFAASAERIQLVGQENFGGQSDNLWWEWVFGILALGAAVGIIMIALNN
Ga0310813_1000025013	3300031716	Soil	MVGVSRLLVALAVSGLLTHPLYADVIPTRRAGDTTDSTKKVESRLVQLGVSAEAAKDQVKNLTDEQTRYFAADSERIQLVGQENWGGQSDNLWWEWLFGILALGGVAALIAIEVAKD
Ga0310813_100015526	3300031716	Soil	MVRVSRLLVAFAVVGLFAQSLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQAQKLTVEQTKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAAIVGVGIFIAIEVSN
Ga0310813_100022783	3300031716	Soil	MVGVSRLLVALAVSGLLTSPLYADVIPTRRAGDTTDSSKKVESRLVQLGVSAEAAKDQVKNLSDDQTRYFAADSERIQLVGQENWGGQSDNLWWEWVFGILALGGVAALIAIEVAKD
Ga0310813_103690182	3300031716	Soil	MVGVSRLLVAFAVVGLFAQHLYADVIPSRRTADASDSSAKVQARLVELGLTADAAKDQVQKLNVDQTKYFAANTDRIQLVGQGENFGGQSDNLWWEWLFGIAALAAAGIVIILALQN
Ga0310813_112123351	3300031716	Soil	MVRVSRLLVAFAVTGLFAQHLYADVIPSRRAADTSDASQKITGRLVALGLTADAAKDQAQKLSVDQTKYFAANLDRIQLVGQGENWGGQSDNLWWEWLFGIGALLVAGAVIVIALND
Ga0310813_119181762	3300031716	Soil	MVGVSRLLVALAVSGLLTSPLYADVIPTRRAGDTADSTKKVESRLVQLGVSAEAAKDQVKNLTDEQTRYFAADSERIQLVGQENWGGQSDNLWWEWLFGILALGGVAALIAVEVSKD
Ga0310813_121187211	3300031716	Soil	MVRVSRLLVAFAVVGLFAQHLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQVQKLSVEQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWLFGIAALAGAAVVLIIALND
Ga0307474_103831791	3300031718	Hardwood Forest Soil	EEDRMVAVGRLLIAVAVAGLFTQPLYADVIPTRRAGDTSESAQKVESRLVQLGVTPEAAKEQIQKLTDDQTNYFAGNPERIQLVGQENWGGQSDNLWWEWVFGIVALTAVAVFIVIEVNGSIN
Ga0307468_1021801881	3300031740	Hardwood Forest Soil	MVRVSRLLVAFAVVGLFAQHLYADVIPSRRTADTSDSSAKVQARLVQLGLTADAAKEQVQKLTVDQAKYFAANTDRIQLAGQGENWGGQSDNLWWEWLFGIAALAGVAAFIIIEVNK
Ga0307475_103520302	3300031754	Hardwood Forest Soil	MVAMSRLLVAVAMAGFFTTTLHADVIPTRRAGDTSESAQKVHSRLLQLGVSPDAAKEQLQKLTDEQTAYFAGDPQRIQLVGQEISAENWGGQSDNFWWEWILGIVFLGVVAGYIAYEVQGKTN
Ga0310892_106248212	3300031858	Soil	RLLVALALVGLFVQPLYADVIPTRRAGDAKESSQKVESRLVTLGMTADAAKDQVSQLTVDQTKYFAGNPDRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD
Ga0306921_101288002	3300031912	Soil	MVRVGRLLVAMAMAGLFTQSLHADVIPTRRAGETSESSRKVESRLLQLGVSVDSAKEQIQKLTDDQTNYFAGNPERIQLVGQENWGGQSDNLWWEWLFGIVALVGVAVFIIWEVNNQ
Ga0307479_102574422	3300031962	Hardwood Forest Soil	MVAVSRLLVAVAMAGLFTQSLHADVIPTRRAADTTESAQKVESRLLQLGVTSEAARQQIQNLTDEQTHYFAGNPERIQLVGQENWGGQSDNLWWEWVFGILALVGVVVLIAVEVGNN
Ga0315281_100994406	3300032163	Sediment	MVAVRRLLAVLAVAALFAQPLYADVIPTRRAGDASESSKKVESRLVELGVSANDAKGQVQKLTAQETKYFADSPERIQLVGQENFGGQSDNLWWEWLFGIVALVGGALVIYFVLANNGF
Ga0310812_100954671	3300032421	Soil	VGLFAQHLYADVIPSRRTADTSDSSAKVQARLVELGLTADAAKDQVQKLSVEQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWLFGIAALAGAAVVLIIALND
Ga0310812_101904551	3300032421	Soil	MVGVSRLLVAFAVVGLFAQHLYADVIPSRRTADASDSSAKVQARLVELGLTADAAKDQVQKLNVDQTKYFAANTDRIQLVGQGENWGGQSDNLWWEWLFGIAALAGAAVVIIIALND
Ga0310812_103479641	3300032421	Soil	MVGVSRLLVAFAVASLLSQPLYADVIPTRRAADSSDSSAKVESRLVQLGLTAEAAKDQVRDLTDDQTKYFAAASERIQLVGQENWGGQSDNLWWEWVFGILALGAVGAVIVIALND
Ga0314785_018396_89_439	3300034479	Soil	MVGASRLLVALALVGLFTQPLYADVIPTRRAGDAKESSQKVESRLVTLGMTSDAARDQVQQLTVEQTKYFAGNSDRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD
Ga0314781_140381_3_296	3300034660	Soil	HLYADVIPSRRAADTSDSSAKVQARLVELGLTADAAKDQVQKLTVEQTKYFAGNSDRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD
Ga0314783_059406_323_673	3300034662	Soil	MVGASRLLVALAVAGLFAQPLYADVIPTRRAGDTKESSQKVQTRLVDLGMTADAAKDQVSQLTAEQTKYFAGNPGRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD
Ga0314786_075923_228_578	3300034664	Soil	MVGASRLLVALALVGLFVQPLYADVIPTRRAGDAKESSQKVESRLVTLGMTADAARDQVRQLTVEQTKYFAGNSDRIQLVGQGENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD
Ga0314787_072178_146_496	3300034665	Soil	MVGASRLLVALALVGLFVQPLYADVIPTRRAGDTKESTQKVQSRLVELGMTADAAKDQVSQLNVDQTKYFAGNPDRIQLVAQAENFGGQSDNLWWEWVFGIAMLAVGVGVIIIVAD
Ga0314793_050241_310_660	3300034668	Soil	MVAVSRLLVALAMAGLFTQPIYADVIPTRRAADTTESAKKVETRLVQLGVAADAAKDQIQKLTDDQTNYFAGNPERIQLVGQENWGGQSDNLWWEWLFGIAALAGAAVVLIIALND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086767

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences