Metagenome / Metatranscriptome Family F086766

Basic Information
Family ID	F086766
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	50 residues
Representative Sequence	MYIDPTAGSLVLQVLAAGALSAVAVFGRLREGLKHFFRSLSPRRWAQKR
Number of Associated Samples	95
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.27 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	88.18 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (56.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.818 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.091 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.95% β-sheet: 0.00% Coil/Unstructured: 48.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00171	Aldedh	33.64
PF01663	Phosphodiest	2.73
PF05635	23S_rRNA_IVP	1.82
PF00248	Aldo_ket_red	0.91
PF03631	Virul_fac_BrkB	0.91
PF11118	DUF2627	0.91
PF13540	RCC1_2	0.91
PF00515	TPR_1	0.91
PF06144	DNA_pol3_delta	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	33.64
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	33.64
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	33.64
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.91
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	0.91
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.36 %
Unclassified	root	N/A	43.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.36 %
Unclassified	root	N/A	43.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.36 %
Unclassified	root	N/A	43.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	13.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	11.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.73 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.82 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.09 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.73 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.73 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.82 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.09 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.82 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	7.27 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	1.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.82 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	7.27 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.82 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7.27 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.82 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8686318	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13857866	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300000890\|JGI11643J12802_10160488	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300000956\|JGI10216J12902_113578347	Not Available	929	Open in IMG/M
3300003267\|soilL1_10100122	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300003267\|soilL1_10110948	All Organisms → cellular organisms → Bacteria	3313	Open in IMG/M
3300003323\|rootH1_10294672	All Organisms → cellular organisms → Bacteria	2217	Open in IMG/M
3300003990\|Ga0055455_10026327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1471	Open in IMG/M
3300003993\|Ga0055468_10046096	Not Available	1091	Open in IMG/M
3300004114\|Ga0062593_101567079	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300004282\|Ga0066599_100659648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	712	Open in IMG/M
3300004780\|Ga0062378_10174454	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005332\|Ga0066388_106733129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	579	Open in IMG/M
3300005436\|Ga0070713_101817518	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	591	Open in IMG/M
3300005439\|Ga0070711_100185224	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300005440\|Ga0070705_100176353	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300005444\|Ga0070694_100399136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1076	Open in IMG/M
3300005445\|Ga0070708_100691520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	960	Open in IMG/M
3300005471\|Ga0070698_101080694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	750	Open in IMG/M
3300005618\|Ga0068864_100010439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7673	Open in IMG/M
3300005873\|Ga0075287_1000779	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4031	Open in IMG/M
3300005873\|Ga0075287_1040677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300006049\|Ga0075417_10351489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300006844\|Ga0075428_101326077	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300006845\|Ga0075421_100551608	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300006847\|Ga0075431_101250248	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300006876\|Ga0079217_10893936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	632	Open in IMG/M
3300006876\|Ga0079217_11266340	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006918\|Ga0079216_10811789	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300009012\|Ga0066710_100796223	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300009100\|Ga0075418_11112470	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300009147\|Ga0114129_11802757	Not Available	744	Open in IMG/M
3300009156\|Ga0111538_10368907	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300010038\|Ga0126315_10335761	Not Available	939	Open in IMG/M
3300010039\|Ga0126309_10540196	Not Available	724	Open in IMG/M
3300010039\|Ga0126309_11187583	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	523	Open in IMG/M
3300010040\|Ga0126308_10771107	Not Available	665	Open in IMG/M
3300010045\|Ga0126311_10853298	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300011444\|Ga0137463_1009582	All Organisms → cellular organisms → Bacteria	3295	Open in IMG/M
3300012045\|Ga0136623_10397506	Not Available	583	Open in IMG/M
3300012212\|Ga0150985_111251757	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300012350\|Ga0137372_10612002	Not Available	798	Open in IMG/M
3300012469\|Ga0150984_102934548	Not Available	533	Open in IMG/M
3300012530\|Ga0136635_10087992	Not Available	976	Open in IMG/M
3300012681\|Ga0136613_10048842	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300012684\|Ga0136614_10620080	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	769	Open in IMG/M
3300012957\|Ga0164303_11226226	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012958\|Ga0164299_11076468	Not Available	599	Open in IMG/M
3300014263\|Ga0075324_1005624	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300014271\|Ga0075326_1276059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300014314\|Ga0075316_1067862	Not Available	804	Open in IMG/M
3300014877\|Ga0180074_1117423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300017695\|Ga0180121_10055437	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300017789\|Ga0136617_10123468	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300018028\|Ga0184608_10159155	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300018076\|Ga0184609_10290376	Not Available	765	Open in IMG/M
3300018076\|Ga0184609_10443420	Not Available	598	Open in IMG/M
3300018422\|Ga0190265_10666117	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300018429\|Ga0190272_10357369	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300018429\|Ga0190272_12444376	Not Available	567	Open in IMG/M
3300018466\|Ga0190268_10208357	Not Available	1076	Open in IMG/M
3300018466\|Ga0190268_11775450	Not Available	554	Open in IMG/M
3300018920\|Ga0190273_11247824	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	637	Open in IMG/M
3300018920\|Ga0190273_11543536	Not Available	589	Open in IMG/M
3300019254\|Ga0184641_1202480	Not Available	555	Open in IMG/M
3300019259\|Ga0184646_1110369	Not Available	537	Open in IMG/M
3300019259\|Ga0184646_1353896	Not Available	573	Open in IMG/M
3300021073\|Ga0210378_10089503	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300021080\|Ga0210382_10069125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1426	Open in IMG/M
3300021080\|Ga0210382_10262749	Not Available	756	Open in IMG/M
3300021090\|Ga0210377_10351833	Not Available	888	Open in IMG/M
3300021184\|Ga0196959_10032371	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300021184\|Ga0196959_10043754	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300022694\|Ga0222623_10229676	Not Available	718	Open in IMG/M
3300022694\|Ga0222623_10340100	Not Available	574	Open in IMG/M
3300025537\|Ga0210061_1059522	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300025559\|Ga0210087_1013849	Not Available	1677	Open in IMG/M
3300025791\|Ga0210115_1011811	Not Available	2058	Open in IMG/M
3300025792\|Ga0210143_1024439	Not Available	1052	Open in IMG/M
3300025922\|Ga0207646_10256535	Not Available	1580	Open in IMG/M
3300025996\|Ga0208777_1001438	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300026029\|Ga0208002_1018355	Not Available	676	Open in IMG/M
3300026045\|Ga0208535_1021559	Not Available	608	Open in IMG/M
3300026062\|Ga0208654_1020226	Not Available	835	Open in IMG/M
3300026075\|Ga0207708_10228344	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300026095\|Ga0207676_10013252	All Organisms → cellular organisms → Bacteria	5922	Open in IMG/M
3300027735\|Ga0209261_10098468	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300027909\|Ga0209382_10520270	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300028589\|Ga0247818_10410002	Not Available	914	Open in IMG/M
3300028771\|Ga0307320_10089655	Not Available	1162	Open in IMG/M
3300028791\|Ga0307290_10164127	Not Available	814	Open in IMG/M
3300028803\|Ga0307281_10422165	Not Available	513	Open in IMG/M
3300028814\|Ga0307302_10139518	Not Available	1171	Open in IMG/M
3300028824\|Ga0307310_10029670	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300028872\|Ga0307314_10201472	Not Available	599	Open in IMG/M
3300028881\|Ga0307277_10423974	Not Available	596	Open in IMG/M
3300028885\|Ga0307304_10084594	Not Available	1242	Open in IMG/M
3300030006\|Ga0299907_10475719	Not Available	992	Open in IMG/M
3300030006\|Ga0299907_11321229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300030619\|Ga0268386_10654181	Not Available	693	Open in IMG/M
3300030619\|Ga0268386_10669726	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300030620\|Ga0302046_10506714	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300031229\|Ga0299913_11360912	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031455\|Ga0307505_10641789	Not Available	518	Open in IMG/M
3300031824\|Ga0307413_10793203	Not Available	795	Open in IMG/M
3300031824\|Ga0307413_11785657	Not Available	550	Open in IMG/M
3300031965\|Ga0326597_10011291	All Organisms → cellular organisms → Bacteria	11850	Open in IMG/M
3300032002\|Ga0307416_102954867	Not Available	569	Open in IMG/M
3300032004\|Ga0307414_10922541	Not Available	801	Open in IMG/M
3300034818\|Ga0373950_0010704	Not Available	1488	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.64%
Host-Associated	Host-Associated	16.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.27%
Aquatic	Environmental → Aquatic	26.36%
Plants	Host-Associated → Plants	16.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.27%
Freshwater	Environmental → Aquatic → Freshwater	14.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.73%
Sediment	Environmental → Aquatic → Sediment	6.36%
Marine	Environmental → Aquatic → Marine	5.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Rhizome	Host-Associated → Plants → Rhizome	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.18%
Loam	Environmental → Terrestrial → Soil → Loam	8.18%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.36%
Ice	Environmental → Aquatic → Freshwater → Ice	5.45%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.82%
Sand	Environmental → Terrestrial → Soil → Sand	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Pond	Environmental → Aquatic → Freshwater → Pond	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.36%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.82%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	6.36%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	5.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.45%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	5.45%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.73%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.73%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.91%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026029	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026045	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026062	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01249650	2088090015	Soil	MYIDPTTGSLVLQVLAAGVLSAVAVFGRLREGIKHFFRSLSPRRWAQKR
ICChiseqgaiiFebDRAFT_138578662	3300000363	Soil	MYIDPSAGSLVIQVLAAAAISAVAMWTRAREATKSFFRSLVSRGRRWTGVR*
JGI11643J12802_101604882	3300000890	Soil	MYIDPTTGSLVLQVLAAGVLSAVAVFGRLREGIKHFFRSLSPRRWAQKR*
JGI10216J12902_1135783472	3300000956	Soil	MYIDPTSGSIVLQVVAAAALSAVAMVGRVREAGKSFVRTLVSRVRRWTGVR*
soilL1_101001222	3300003267	Sugarcane Root And Bulk Soil	MYIDPTAGSLVLQVLAAGVLSAVAVFARLREGVKHVFRSLLPRRWAQKR*
soilL1_101109482	3300003267	Sugarcane Root And Bulk Soil	MYIDPTSGSLALQVLAAAALSAVAMFSRAREATKSFFRSLVSRGRRWTGSR*
rootH1_102946723	3300003323	Sugarcane Root And Bulk Soil	MYIDPTSGSLALQVLAAAALSAVAMFSRAREATKTFLRSLVSRGRRWTGSR*
Ga0055455_100263271	3300003990	Natural And Restored Wetlands	MYIDPTSGSLMLQVLAAGALSAVAMTSRIREAVKHTFRSLVSRGRRWTGSR*
Ga0055468_100460961	3300003993	Natural And Restored Wetlands	AGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR*
Ga0062593_1015670792	3300004114	Soil	MYIDPTAGSLMLQVLAAAALSAVAMFSRLREVLKHFFRSLLPRRWAQKR*
Ga0066599_1006596482	3300004282	Freshwater	MYIDPTAGSLALQVLAAGALSAVAFFGRIREAVKAFFRSHAPRRWAHKR*
Ga0062378_101744541	3300004780	Wetland Sediment	MYIDPTAGSLVLQALAAGVLSALAMFSRFREGAKSFFKSLVLRRGRWTDSR*
Ga0066388_1067331291	3300005332	Tropical Forest Soil	MYIDPTAGSLMLQALAAGALSALAMFSRVRDGAKSFFKSLLPGRPRWIGKR*
Ga0070713_1018175182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTSGSILLQVIAAAALSAVAMFGRVREAGKAFIRTLVSRVRRWMGVR*
Ga0070711_1001852242	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTSGSILLQVIAAAALSAVAMFGRVREAGKSFIRTLVSRVRRWMGVR*
Ga0070705_1001763531	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTAGSLVLQFLAAAALSAVAMFSRLRQAAKSFFKSLIPRRGRWAVK
Ga0070694_1003991362	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTAGSLVLQFLAAAALSAVAMFSRLRQAAKSFFKSLIPRRGRWAVKR*
Ga0070708_1006915202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTAGSLVLQFIAAGVLSLLAMFSRVREAAKSFFKSLLPGNHRWTGKQ*
Ga0070698_1010806941	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTSGSLVLQVLAAGALSAVAMTSRIRDAVKHTFRSLLTRGRRWTGNR*
Ga0068864_1000104393	3300005618	Switchgrass Rhizosphere	MYIDPTSGSLVLQIVAAAALSAVAMMTRAREAAKSLGRSLVSRIRRWTGAR*
Ga0075287_10007792	3300005873	Rice Paddy Soil	MYIDPTAGSLVLQFVAAGVLSLLAMFSRVREGAKSFFKSLLPGHHRWTGKP*
Ga0075287_10406772	3300005873	Rice Paddy Soil	MYIDPTSGSLALQVLAAAALSAVAMFGRAREATKSFFQSLVSRGRRWTSNH*
Ga0075417_103514892	3300006049	Populus Rhizosphere	MYIDPTSGSLALQILAAGALSALAMFSRAREATKSFFRNLVSRGRRWPGRH*
Ga0075428_1013260772	3300006844	Populus Rhizosphere	MYIDPTAGSLMLQVLAAAALSAVAMFSRLREGLKQVFRSLSPRRWAQKR*
Ga0075421_1005516082	3300006845	Populus Rhizosphere	MYIDPTTGSLVLQVLAAGALSAVALFSRVREGLKAFFRTLSPRRWAHKR*
Ga0075431_1012502482	3300006847	Populus Rhizosphere	MYIDPTTGSLVLQVLAAGALSAVALFSRVREGLKAFFRTLSPRRWAH
Ga0079217_108939362	3300006876	Agricultural Soil	MYIDPTAGSLVLQVLAAGALSAVAVFGRLRESLKNVFRSLLPRRWAQKR*
Ga0079217_112663401	3300006876	Agricultural Soil	MYIDPTAGSLALQVLAAGALSAVAMFARVPEALKHFFRSLMPRRWAHKR*
Ga0079216_108117892	3300006918	Agricultural Soil	MYIDPTTGSLVLQVLAAGALSAVAVFGRLREGIKHFFRSLLPRRWAQKR*
Ga0066710_1007962232	3300009012	Grasslands Soil	MYIDPTAGSLLLQFIAAGVLSAVAMMSRVREGVKSLFKSILPGRWTGKR
Ga0075418_111124702	3300009100	Populus Rhizosphere	MYIDPTAGSLVLQVLAAGVLSAVVMLGRLREGLKQVFRSLSPRRWAQKR*
Ga0114129_118027572	3300009147	Populus Rhizosphere	QVLAAGALSAVAVFSRLREGLKHFFRSLSPRRWAQKR*
Ga0111538_103689072	3300009156	Populus Rhizosphere	MLQVLAAAALSAVAMFSRLREGLKQVFRSLSPRRWAQKR*
Ga0126315_103357612	3300010038	Serpentine Soil	MYIDPTSGSLALQVLAAGALSAVAMVSRVRETAKAWFRALVSRGRRWTGSR*
Ga0126309_105401962	3300010039	Serpentine Soil	MYIDPTSGSLVLQVLAAGALSAVAMMSRVREGAKMWFRSLLARGRRWTGSR*
Ga0126309_111875831	3300010039	Serpentine Soil	MYIDPTSGSLALQVLAAGALSAVAMFSRAREATKSFFRNLVSRGHRWTGDR*
Ga0126308_107711071	3300010040	Serpentine Soil	MYIDPTSGSLALQVLAAGALSALAMFSRAREVTKTFFRNLLSRGRRWSGHH*
Ga0126311_108532982	3300010045	Serpentine Soil	MYIDPTSGSLVLQVLAAGALSAVAMMSRVRETTKNWFRSLVSRGRRWTGSR*
Ga0137463_10095824	3300011444	Soil	MYIDPTSGSLMLQVLAAGVLSAVAMVSRVRETAKGWFRSLVSLGRRWTGSR*
Ga0136623_103975062	3300012045	Polar Desert Sand	MYIDPTTGSLVLQVLAASALSAVALFGRVRETLKTFFRSITPRRWAPKR*
Ga0150985_1112517572	3300012212	Avena Fatua Rhizosphere	MYIDPTSGSLALQVLAAGVLSAVAMFSRAREATKSFFRNLVSHGRRWSRNR*
Ga0137372_106120022	3300012350	Vadose Zone Soil	MYIDPTAGSLLLQFIAAGVLSAVAMISRVREGVKSLFKSLLPGHRRWTGKQ*
Ga0150984_1029345481	3300012469	Avena Fatua Rhizosphere	SSGHADVTPTPEGSMYIDPTSGSLVLQVLAAGALSAVAMMSRVREGAKMWFRSLLSRGRRWTGNR*
Ga0136635_100879921	3300012530	Polar Desert Sand	MYIDPTTGSLALQVVAAGALSALAMFSRAREAAKMLFRNLVSRGRRWPGGR*
Ga0136613_100488422	3300012681	Polar Desert Sand	MYIDPTAGSLVLQILAAAALSAVAMGVRVREGVKSFFRSIVPRRGP*
Ga0136614_106200801	3300012684	Polar Desert Sand	SEAFMYIDPTAGSLVLQILAAAALSGVVMAGRVRDGVKSFFRSIIPRRGP*
Ga0164303_112262261	3300012957	Soil	MYIDPTSGSLVFQVIAAAALSAVAMMACAREATTPFFNSLISRP
Ga0164299_110764681	3300012958	Soil	SGSLILQVLAAGALSAVAMMSRAREATKAFFRSLIARGRRWTGAR*
Ga0075324_10056242	3300014263	Natural And Restored Wetlands	MYIDPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR*
Ga0075326_12760592	3300014271	Natural And Restored Wetlands	WNPRGHMYIDPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR*
Ga0075316_10678621	3300014314	Natural And Restored Wetlands	TSGSLALQVLAAAALSAVAMFGRAREATKSFFQSLVSRGRRWTSNH*
Ga0180074_11174232	3300014877	Soil	GSLVLQVLAAGALSAVAIFSRVREGLKAFFRSLSPRRWAHKR*
Ga0180121_100554372	3300017695	Polar Desert Sand	MYIDPTTGSLALQVLAAGALSAVAMFSRAREVTKSFFQNLVSRGRRWSGGR
Ga0136617_101234682	3300017789	Polar Desert Sand	MYIDPTAGSLVLQILAAAALSAVAMGVRVREGVKSFFRSIVPRRGP
Ga0184608_101591552	3300018028	Groundwater Sediment	MYIDPTTGSLVIQVLAAGALSAVVLFGRVRDALKAFFRSLSPRRWAHKR
Ga0184609_102903762	3300018076	Groundwater Sediment	MYIDPTTGSLALQVLAAGALSAVALFGRVREFLKVFFRSLVPRRRAQKR
Ga0184609_104434201	3300018076	Groundwater Sediment	MYIDPTSGSLVLQVLAAGALSAVAMMSRVREAMKHAFRSLVSRGRRWTGSR
Ga0190265_106661172	3300018422	Soil	MYIDPTTGSLVLQVLAAGALSAVAIFGRLREGLKTFFRSLAPRRWAHKR
Ga0190272_103573692	3300018429	Soil	MYIDPTTGSLVLQVLAAGALSAVALFGRVREFLKAFFRSILPRRWAHKR
Ga0190272_124443761	3300018429	Soil	PPGHPIVTPDPEGPMYIDPTSGSLMLQVLAAGALSAVAMMSRVREAMKHTFRSLLTRGRRWTGNR
Ga0190268_102083572	3300018466	Soil	MYIDPTAGSLVLQVLAAGVLSAVVMLGRLREGIKQVFRSLWPRRWAQKR
Ga0190268_117754502	3300018466	Soil	MYIDPTAGSLVLQALAAGALSALAMFSRVREGAKSFFKSLVPRRWTGS
Ga0190273_112478241	3300018920	Soil	MYIDPTSGSLMLQVLAAGALSAVAMMSRVREATKMWFRTLVERGRRWTGNR
Ga0190273_115435361	3300018920	Soil	MYIDPTSGSLMLQVLAAGALSAVAMMSRVRETAKHWFQSIVSRGRRWTGNR
Ga0184641_12024801	3300019254	Groundwater Sediment	PTSGSLVLQVLAAGALSAVAMISRVREGAKTWFRSLLSRGRRWTGSR
Ga0184646_11103691	3300019259	Groundwater Sediment	MYIDPTSGSLMLQVLAAGALSAVAMMSRVREGAKTWFRSLVSLGRRWTGSR
Ga0184646_13538962	3300019259	Groundwater Sediment	MYIDPTAGSLLIQIVAAGALSVLAMFSRVREGAKTFFKSLLPGRNRWTGKR
Ga0210378_100895032	3300021073	Groundwater Sediment	MYIDPTTGSLALQVLAAGALSAVALFGRVREFLKVFFRSLVPRRWAQKR
Ga0210382_100691252	3300021080	Groundwater Sediment	MYIDPTAGSLLLQFIAAGVLSAMAMMSRVREGVKSLFKSILPGRWTGKR
Ga0210382_102627492	3300021080	Groundwater Sediment	MYIDPTSGSLMLQVLAAGALSAVAMMSRVRETAKHWFQSIVSRGRRWTGSR
Ga0210377_103518332	3300021090	Groundwater Sediment	MYIDPTSGSLMLQVLAAGVLSAVAMVSRVRETAKGWFRSLVSLGRRWTGSR
Ga0196959_100323712	3300021184	Soil	MYIDPTAGSLVLQVLAAGALSAVAVFGRLREGLKHMFRSLVPRRWAQKR
Ga0196959_100437542	3300021184	Soil	MYIDPTAGSLVLQVLAAGALSAVAVFGRLREGLKHFFRSLSPRRWAQKR
Ga0222623_102296761	3300022694	Groundwater Sediment	MYIDPTSGSLVLQVLAAGALSAVAMVSLVREGAKTWFRSLVSLGRRWTGSR
Ga0222623_103401002	3300022694	Groundwater Sediment	MYIDPTTGSLALQVLAAGALSAVALFGRVREFLKVFFRSLLPRRWAQKR
Ga0210061_10595222	3300025537	Natural And Restored Wetlands	MYIDPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR
Ga0210087_10138493	3300025559	Natural And Restored Wetlands	AESWNPRGHMYIDPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR
Ga0210115_10118113	3300025791	Natural And Restored Wetlands	DPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR
Ga0210143_10244392	3300025792	Natural And Restored Wetlands	PRGHMYIDPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR
Ga0207646_102565352	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTSGSLMLQVLAAGVLSAVAMVSRVRETAKNWFRSLVSLGRRWTGSR
Ga0208777_10014382	3300025996	Rice Paddy Soil	MYIDPTAGSLVLQFVAAGVLSLLAMFSRVREGAKSFFKSLLPGHHRWTGKP
Ga0208002_10183552	3300026029	Natural And Restored Wetlands	RGHMYIDPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR
Ga0208535_10215592	3300026045	Natural And Restored Wetlands	ESWNPRGHMYIDPTAGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR
Ga0208654_10202262	3300026062	Natural And Restored Wetlands	AGSLALQVLAAAALSAVAVFGRLREGLKQFFRSLLPRRWAQKR
Ga0207708_102283442	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDPTAGSLMLQVLAAAALSAVAMFSRLREVLKHFFRSLLPRRWAQKR
Ga0207676_100132522	3300026095	Switchgrass Rhizosphere	MYIDPTSGSLVLQIVAAAALSAVAMMTRAREAAKSLGRSLVSRIRRWTGAR
Ga0209261_100984682	3300027735	Wetland Sediment	MYIDPTAGSLVLQALAAGVLSALAMFSRFREGAKSFFKSLVLRRGRWTDSR
Ga0209382_105202702	3300027909	Populus Rhizosphere	MYIDPTTGSLVLQVLAAGALSAVALFSRVREGLKAFFRTLSPRRWAHKR
Ga0247818_104100021	3300028589	Soil	AESWNPRGHMYIDPTAGSLMLQVLAAAALSAVAMFSRLREVLKHFFRSLLPRRWAQKR
Ga0307320_100896551	3300028771	Soil	MYIDPTSGSLMLQVLAAGALSAVAMMSRVRETAKMWFRSLLTRGRRWTGNR
Ga0307290_101641272	3300028791	Soil	MYIDPTSGSLVLQVLAAGALSAVAMMSRVREGAKMWFRSLLARGRRWTGSR
Ga0307281_104221651	3300028803	Soil	VAPELPGGPMYIDPTSGSLMLQVLAAGVLSAVAMVSRVRETAKGWFRSLVSLGRRWTGSR
Ga0307302_101395181	3300028814	Soil	MYIDPTSGSLMLQVLAAGALSAVAMVSRVRETAKGWFRTLVSRGRRWTGSR
Ga0307310_100296704	3300028824	Soil	MYIDPTAGSLLLQFIAAGVLSAMAMISRVREGVKSLFKSLLPGHRWWTGKR
Ga0307314_102014722	3300028872	Soil	PTSGSLALQVLAAGVLSAAAMFSRVREATMSFFRSLLSRGRRWSGHP
Ga0307277_104239741	3300028881	Soil	APRPRMYIDPTAGSLLLQFIAAGVLSAMAMMSRVREGVKSLFKSILPGRWTGKR
Ga0307304_100845941	3300028885	Soil	MYIDPTSGSLVLQVLAAGALSAVAMMSRVRETIKHTFRSLVSRGRRWTGNR
Ga0299907_104757192	3300030006	Soil	LQVLAAGALSAVALFARVREGLKGFFRALMPRRWAHKR
Ga0299907_113212292	3300030006	Soil	TGSLVLQVLAAGALSAVALFSRVRETLKAFFRSLLPRRWAHKR
Ga0268386_106541811	3300030619	Soil	YIDPTAGSLVLQVLAAGVLSALAMFSRVREGVKSFFRSLLPRRGRWTDDR
Ga0268386_106697262	3300030619	Soil	MYIDPTTGSLVLQVLAAGALSAVALFSRVRESLKALFRSLLPRRWAHKR
Ga0302046_105067142	3300030620	Soil	MYIDPTTGSLVLQVLAAGALSAVALFGRVREGLKAFFRALSPRRWAHKR
Ga0299913_113609122	3300031229	Soil	MYIDPTTGSLVLQVLAAGALSAVALFGRVREGLKRLLRSLTPRRWAHKR
Ga0307505_106417892	3300031455	Soil	MYIDPTSGSLALQVLAAGALSALAMFSRAREATKSFFRSLVSRGRRWSGHS
Ga0307413_107932032	3300031824	Rhizosphere	MYIDPASGSLALQVVAAAALSAVAMFSRARESAKSFFRSLASRGRRWTGGR
Ga0307413_117856572	3300031824	Rhizosphere	MYIDPTSGSLVLQVLAAGALSAVAMMSRVRESTKNWFRSLVSRGRRWTGSR
Ga0326597_100112912	3300031965	Soil	MYIDPATGSLVLQILAAGVLSVVAMLSRVREGVKSLFRSILRYRWAGKQ
Ga0307416_1029548671	3300032002	Rhizosphere	VCRPVTLTKWGNAMYIDPTSGSLVLQVLAAGALSAVAMMSRVRESTKNWFRSLVSRGRRWTGSR
Ga0307414_109225412	3300032004	Rhizosphere	MYIDPASGSLALQVIAAAALSAVAMFSRARESTKSFFRSLASRGRRWTGGR
Ga0373950_0010704_94_249	3300034818	Rhizosphere Soil	MYIDPTSGSLMLQVLAAGALSAVAMMSRVREAVKHTFRSLVSRGRRWTGSR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086766

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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