Metagenome / Metatranscriptome Family F086734

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086734
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	60 residues
Representative Sequence	MIDKESERTVSGWLRLGDRLTGRKPVEGRCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Number of Associated Samples	91
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.26 %
% of genes near scaffold ends (potentially truncated)	28.18 %
% of genes from short scaffolds (< 2000 bps)	76.36 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.909 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.55% β-sheet: 17.05% Coil/Unstructured: 53.41%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01551	Peptidase_M23	57.27
PF00293	NUDIX	10.00
PF02729	OTCace_N	7.27
PF08323	Glyco_transf_5	3.64
PF00156	Pribosyltran	2.73
PF00534	Glycos_transf_1	1.82
PF02585	PIG-L	0.91
PF13147	Obsolete Pfam Family	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	3.64
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	3.64
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.82 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	51.82 %
Unclassified	root	N/A	1.82 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	50.00 %
Unclassified	root	N/A	1.82 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	50.00 %
Unclassified	root	N/A	1.82 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100898583	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300002911\|JGI25390J43892_10012107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2021	Open in IMG/M
3300004156\|Ga0062589_102457077	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300004157\|Ga0062590_100916830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	822	Open in IMG/M
3300005093\|Ga0062594_100020356	All Organisms → cellular organisms → Bacteria	2761	Open in IMG/M
3300005171\|Ga0066677_10007361	All Organisms → cellular organisms → Bacteria	4590	Open in IMG/M
3300005172\|Ga0066683_10358746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	904	Open in IMG/M
3300005174\|Ga0066680_10337901	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005176\|Ga0066679_10043498	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300005186\|Ga0066676_10159097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1426	Open in IMG/M
3300005186\|Ga0066676_10424409	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005330\|Ga0070690_100506480	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300005343\|Ga0070687_100172584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1288	Open in IMG/M
3300005440\|Ga0070705_100175089	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300005446\|Ga0066686_10003918	All Organisms → cellular organisms → Bacteria	6851	Open in IMG/M
3300005446\|Ga0066686_10011076	All Organisms → cellular organisms → Bacteria	4691	Open in IMG/M
3300005454\|Ga0066687_10168223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1173	Open in IMG/M
3300005536\|Ga0070697_100162038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1890	Open in IMG/M
3300005536\|Ga0070697_100388381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1210	Open in IMG/M
3300005545\|Ga0070695_100141085	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300005553\|Ga0066695_10011487	All Organisms → cellular organisms → Bacteria	4662	Open in IMG/M
3300005553\|Ga0066695_10058440	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300005558\|Ga0066698_10629958	All Organisms → cellular organisms → Bacteria → Terrabacteria group	718	Open in IMG/M
3300005569\|Ga0066705_10938805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300005598\|Ga0066706_10453446	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300006032\|Ga0066696_10162122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1403	Open in IMG/M
3300006034\|Ga0066656_10671797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300006854\|Ga0075425_100910745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1005	Open in IMG/M
3300009012\|Ga0066710_100498238	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1835	Open in IMG/M
3300009090\|Ga0099827_10028602	All Organisms → cellular organisms → Bacteria	3992	Open in IMG/M
3300009137\|Ga0066709_100522278	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300010304\|Ga0134088_10137175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1161	Open in IMG/M
3300010320\|Ga0134109_10053485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1341	Open in IMG/M
3300010321\|Ga0134067_10192325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300010329\|Ga0134111_10484909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300010337\|Ga0134062_10141546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1063	Open in IMG/M
3300010396\|Ga0134126_11345189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	790	Open in IMG/M
3300010399\|Ga0134127_10113906	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300012198\|Ga0137364_10019009	All Organisms → cellular organisms → Bacteria	4177	Open in IMG/M
3300012206\|Ga0137380_10009507	All Organisms → cellular organisms → Bacteria	8819	Open in IMG/M
3300012207\|Ga0137381_10919341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300012208\|Ga0137376_10688366	All Organisms → cellular organisms → Bacteria → Terrabacteria group	882	Open in IMG/M
3300012356\|Ga0137371_11132129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300012362\|Ga0137361_10192391	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300012685\|Ga0137397_10011983	All Organisms → cellular organisms → Bacteria	6061	Open in IMG/M
3300012918\|Ga0137396_10123928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1864	Open in IMG/M
3300012918\|Ga0137396_10676699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	762	Open in IMG/M
3300012922\|Ga0137394_10697622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	855	Open in IMG/M
3300012925\|Ga0137419_10071604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2312	Open in IMG/M
3300012927\|Ga0137416_10367293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1211	Open in IMG/M
3300012930\|Ga0137407_11132524	All Organisms → cellular organisms → Bacteria → Terrabacteria group	742	Open in IMG/M
3300012944\|Ga0137410_10245706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1401	Open in IMG/M
3300012944\|Ga0137410_10470567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1023	Open in IMG/M
3300012972\|Ga0134077_10196604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	820	Open in IMG/M
3300014154\|Ga0134075_10225629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	808	Open in IMG/M
3300015241\|Ga0137418_10044100	All Organisms → cellular organisms → Bacteria	4108	Open in IMG/M
3300015245\|Ga0137409_10219625	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1702	Open in IMG/M
3300015358\|Ga0134089_10510054	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300017656\|Ga0134112_10126909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	971	Open in IMG/M
3300018027\|Ga0184605_10005052	All Organisms → cellular organisms → Bacteria	4735	Open in IMG/M
3300018027\|Ga0184605_10005531	All Organisms → cellular organisms → Bacteria	4567	Open in IMG/M
3300018027\|Ga0184605_10139900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1085	Open in IMG/M
3300018027\|Ga0184605_10168712	All Organisms → cellular organisms → Bacteria → Terrabacteria group	989	Open in IMG/M
3300018071\|Ga0184618_10100266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1134	Open in IMG/M
3300018071\|Ga0184618_10159134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300018433\|Ga0066667_10095741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1960	Open in IMG/M
3300018482\|Ga0066669_10019112	All Organisms → cellular organisms → Bacteria	3779	Open in IMG/M
3300018482\|Ga0066669_10431472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1126	Open in IMG/M
3300018482\|Ga0066669_11193108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300018482\|Ga0066669_11697157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300019279\|Ga0184642_1410751	All Organisms → cellular organisms → Bacteria → Terrabacteria group	535	Open in IMG/M
3300019878\|Ga0193715_1033269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1119	Open in IMG/M
3300019885\|Ga0193747_1034242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1263	Open in IMG/M
3300020018\|Ga0193721_1044527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1171	Open in IMG/M
3300020022\|Ga0193733_1004340	All Organisms → cellular organisms → Bacteria	4093	Open in IMG/M
3300021080\|Ga0210382_10049139	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1654	Open in IMG/M
3300021080\|Ga0210382_10162123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	961	Open in IMG/M
3300021344\|Ga0193719_10028707	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300021344\|Ga0193719_10184782	All Organisms → cellular organisms → Bacteria → Terrabacteria group	893	Open in IMG/M
3300021418\|Ga0193695_1048915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	918	Open in IMG/M
3300022534\|Ga0224452_1006335	All Organisms → cellular organisms → Bacteria	2934	Open in IMG/M
3300025907\|Ga0207645_10614403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300025918\|Ga0207662_10365266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	972	Open in IMG/M
3300026300\|Ga0209027_1008296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3915	Open in IMG/M
3300026310\|Ga0209239_1249039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300026343\|Ga0209159_1069532	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1627	Open in IMG/M
3300026524\|Ga0209690_1102695	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1166	Open in IMG/M
3300026536\|Ga0209058_1070603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1874	Open in IMG/M
3300026536\|Ga0209058_1149435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1099	Open in IMG/M
3300026537\|Ga0209157_1048000	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2288	Open in IMG/M
3300027748\|Ga0209689_1001615	All Organisms → cellular organisms → Bacteria	16839	Open in IMG/M
3300027748\|Ga0209689_1245880	All Organisms → cellular organisms → Bacteria → Terrabacteria group	739	Open in IMG/M
3300027882\|Ga0209590_10998994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300028711\|Ga0307293_10070700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1097	Open in IMG/M
3300028715\|Ga0307313_10229070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300028716\|Ga0307311_10143195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300028784\|Ga0307282_10177395	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1015	Open in IMG/M
3300028791\|Ga0307290_10066195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1309	Open in IMG/M
3300028811\|Ga0307292_10040443	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300028824\|Ga0307310_10384875	All Organisms → cellular organisms → Bacteria → Terrabacteria group	694	Open in IMG/M
3300028878\|Ga0307278_10190311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	916	Open in IMG/M
3300028881\|Ga0307277_10048847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1722	Open in IMG/M
3300028881\|Ga0307277_10161111	All Organisms → cellular organisms → Bacteria → Terrabacteria group	975	Open in IMG/M
3300028881\|Ga0307277_10280195	All Organisms → cellular organisms → Bacteria → Terrabacteria group	738	Open in IMG/M
3300028884\|Ga0307308_10057760	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1826	Open in IMG/M
3300031092\|Ga0308204_10335309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300031720\|Ga0307469_10466491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1097	Open in IMG/M
3300032180\|Ga0307471_102872554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.18%
Host-Associated	Host-Associated	1.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.09%
Aquatic	Environmental → Aquatic	9.09%
Plants	Host-Associated → Plants	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.09%
Sediment	Environmental → Aquatic → Sediment	6.36%
Freshwater	Environmental → Aquatic → Freshwater	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.82%
Loam	Environmental → Terrestrial → Soil → Loam	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.18%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1008985831	3300000956	Soil	MIDKESERAVSSWLRLGDSITGRKSIEGRCDRCGTTGYLSVVLDERLCAG
JGI25390J43892_100121073	3300002911	Grasslands Soil	VIDKECERAVNTWLRLGDRVTGRKPVEGRCDRCSGIGYLSEIGDERVCATCYLDGAAAAS
Ga0062589_1024570772	3300004156	Soil	MIDQESERTVSGWLRLGDRLTGRKAVEGRCDRCGETRYLAEGDRERICAACYLEGEAAAS
Ga0062590_1009168301	3300004157	Soil	TPCAAQRNPMIDQESERTVSGWLRLGDRLTGRKAVEGRCDRCGETRYLAEGDRERICAACYLEGEAAAS*
Ga0062594_1000203562	3300005093	Soil	MIDRESEVAVIRWLYLGDRITGRKPIEGRCDRCGGTGYLSLVESERLCARCYLDGGSADS
Ga0066677_100073614	3300005171	Soil	MIDKESERAVTGWLRLGDRVTGRKPLEGRCDRCHETGYLSEVGGERICASCCLEGEAAAS
Ga0066683_103587462	3300005172	Soil	MIDKESERAVTSWLRLGDRIAGRKSLEGLCDRCGISGYLSVIKDERLCAACGLAGESS*
Ga0066680_103379011	3300005174	Soil	NRDSVIDKESERAVNGWLRLGDRLTGRKPVEGPCDRCGGIGYLSAMGDERLCAGCLLEGAAAAS*
Ga0066679_100434982	3300005176	Soil	MIDKESVRAVAGWLRLADRIAGRTPVEGRCDCCGGTGYLNADKQRLCAACYLDGETAAS*
Ga0066676_101590973	3300005186	Soil	VIDKESERAVTSWLRLGDRVTGRKSLEGRCDRCGRSGYLSVIKNERLCAACGLAGESS*
Ga0066676_104244092	3300005186	Soil	LPAGTLVAALRNHMIDKESERKVTSWLRLGDRLTGRKAIEGRCDRCGETGYLSVIGNQRLCAKCGLEREAVKP*
Ga0070690_1005064802	3300005330	Switchgrass Rhizosphere	MIDRESEVALIRWLYLGDRITGRKPIEGRCDRCGGTGYLSLVESERLCARCYLDGGSADS
Ga0070687_1001725841	3300005343	Switchgrass Rhizosphere	MIDRESEVAVIRWLYLGDRITGRKPIEGRCDRCSGTGYLSLVESERLCARCYLDGGSADS
Ga0070705_1001750893	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MIDRESEVAVIRWLSLGDRITGRKPIEGRCDRCGGTGYLSLVESERLCARCYLDGGSADS
Ga0066686_100039184	3300005446	Soil	MAGGTLVAALRNHMIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVIENQRLCAKCGLEREAARP*
Ga0066686_100110763	3300005446	Soil	LPAGTLVAALRNHMIDKESERKVTSWLRLGDRLTGRKAIEGRCDRCGGIGYLSVIGNQRLCAKCGLEREAVKP*
Ga0066687_101682232	3300005454	Soil	MIDKESERTVSGWLRLGDRVTGRKPVEGHCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0070697_1001620382	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VIDSESERAVTSWLRLGDRVAGRKPVDGRCDRCGRNGYLTAIGNERVCAGCGLDAQL*
Ga0070697_1003883812	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MIDKESEHAVSGWLRLGDRFAGMKPLDGRCDRCGGAGYLSLIEKERLCARCYLDGDDAES
Ga0070695_1001410851	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AVIRWLYLGDRITGRKPIEGRCDRCGGTGYLSLVESERLCARCYLDGGSADS*
Ga0066695_100114872	3300005553	Soil	MIDKESERAVTGWLRLGDRVTGRKPLEGRCDRCHETGYLSEVGGERICAGCCLEGEAAAC
Ga0066695_100584402	3300005553	Soil	MIDKESERTVSGWLRLGDRLTGRASVEGLCDGCGRTGYLSEVDKQRLCAGCYLEGKGVAS
Ga0066698_106299582	3300005558	Soil	MAGGTLVAALRNHMIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVI
Ga0066705_109388052	3300005569	Soil	MIDKDAKRTVTAWLRLGDRLTGRKPVEGPCDGCGETGYVTEFDKRRLCALCYLEGDAPGP
Ga0066706_104534463	3300005598	Soil	MIDKESERTVSGWLRLGDRLTGRASVEGLCDGCGGTGYLSEVDKQRLCAGCYLEGK
Ga0066696_101621222	3300006032	Soil	MIDKESERTVSGWLRLGDRLTGRKPAEGPCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0066656_106717972	3300006034	Soil	MAGGTLVAALRNHMIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVIENQRLCAKCALEREAASP*
Ga0075425_1009107452	3300006854	Populus Rhizosphere	MIDKESERAVSGWLRLGDRVTGRKPLDGRCDRCGELGYLSLVASERLCARCCLDGQAAAS
Ga0066710_1004982383	3300009012	Grasslands Soil	MIDKESERKVTSWLRLGDRLTGRKAIEGRCDRCGGIGYLSVIGNQPLCAKCGLERAAGKP
Ga0099827_100286025	3300009090	Vadose Zone Soil	MIDKESERTVTGWLRLGDRLTGRKPVEGRCDRCGGIGYLTEVEKESLCSACYLEGKAAP*
Ga0066709_1005222783	3300009137	Grasslands Soil	MIDKESERKVTSWLRLGDRMTGRKAIEGSCDRCGEAGYLSVIENQRLCAKCGLEREAARP
Ga0134088_101371752	3300010304	Grasslands Soil	MIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVIENQRLCAKCGLEREAARP
Ga0134109_100534853	3300010320	Grasslands Soil	MIDKESERAVTGWLRLGDRVTGRKPLEGRCDRCHGTGYLSEVGGERICAGCCLEGEAAAS
Ga0134067_101923252	3300010321	Grasslands Soil	SLNPMIDKESERTVSGWLRLGDRLTGRKPVEGHCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS*
Ga0134111_104849092	3300010329	Grasslands Soil	MIDKESERKVTSWLRLGDRLTGRKAIEGRCDRCGETGYLSVIGNERLCAKCGLEREAVKP
Ga0134062_101415463	3300010337	Grasslands Soil	MIDKESERAVTGWLRLGDRLTGRKPLEGRCDRCHETGYLSEVGGERICA
Ga0134126_113451892	3300010396	Terrestrial Soil	MIDQESEVAVIHWLRLGDRITGRKPIEGRCDRCGGTGYLSLVQSERLCARCYLDGGGPDS
Ga0134127_101139062	3300010399	Terrestrial Soil	MIDRESEVAVIRWLYLGDRITGRKPIEGRCDRCGGTGYLSLVQSERLCARCYLDGGGPDS
Ga0137364_100190095	3300012198	Vadose Zone Soil	MIDKESERTVSGWLRLGDRLTGRKPVEGHCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0137399_106456202	3300012203	Vadose Zone Soil	LRLGDRLTGRKAIEGLCDRCGETGYLSVIEKERLCAKCGLEREVGTP*
Ga0137380_100095074	3300012206	Vadose Zone Soil	MIDKESERTVSGWLRLGDRLTGRAPVEGVCDGCGGTGYLSEVDKQRLCAGCYLEGKGVAS
Ga0137381_109193412	3300012207	Vadose Zone Soil	MCGTTQTVIDQESERTVSGWLRLGDRLIGRKPIEGRCDRCGETRYLTAFDSERLCTACYLAGEAAS*
Ga0137376_106883662	3300012208	Vadose Zone Soil	MDKESERTVSGWLRLGDRLTGRKPLEGRCDRCGGTGYLSEVDEQRICAGCYLEGDGVAS*
Ga0137371_111321291	3300012356	Vadose Zone Soil	ALAIPSGTLFAARRKPMIDKESERTVSGWLRLGDRLTGRAPVEGVCDGCGGTGYLSEVDKQRLCAGCYLEGKGVAS*
Ga0137361_101923914	3300012362	Vadose Zone Soil	AVTGWLRLGDRLTGRKAIEGRCDRCGGIGYLTLVGNERVCAGCGLDGEAAAP*
Ga0137397_100119835	3300012685	Vadose Zone Soil	VIDKESERTVTGWLRLGDRLTGRTPVEGSCDRCGTAAYLSEFGKQRLCPRCGLEGKEAAS
Ga0137396_101239282	3300012918	Vadose Zone Soil	MIDKESERKVTSWLRLGDRVTGRKAIEGRCDRCREPGYLSVIEGRRLCAKCGLEREAGAP
Ga0137396_106766992	3300012918	Vadose Zone Soil	MIDKESENKVTSWLRLGDRWTGRKAIEGRCDRCGETGYLSVIEKERLCAKCGLEREEGGGP*
Ga0137394_106976222	3300012922	Vadose Zone Soil	VIDKESERTVTGWLRLGDRLTGRTSVEGSCDRCGTAAYLSEFGKQRLCPRCGLEGKEAAS
Ga0137419_100716044	3300012925	Vadose Zone Soil	VIDKDSERTVTGWLRLGDRLTGRQSVEGPCDGCGRTAYLSEVDKQRLCAGCYLEGKGVAS
Ga0137416_103672932	3300012927	Vadose Zone Soil	MIDKESEKKVTSWLRLGDRLTGRKAIEGRCDRCGGIGYLTLVGNERLCAACGLVGEAAAP
Ga0137407_111325241	3300012930	Vadose Zone Soil	VIDKESETTVSGWLRLGDRLTGRASVEGRCDGCGRTGYLSEVDKQRLCAGCYLEGKGVAS
Ga0137410_102457063	3300012944	Vadose Zone Soil	VIDKDSERTVSGWLRLGDRLTGRTPVEGRCDRCGTAAYLSEFGKQSLCPRCGLEGKEAAS
Ga0137410_104705672	3300012944	Vadose Zone Soil	MIDKESENKVTSWLRLGDRLTGRKAIEGRCDRCGETGYLSVIEKERLCAKCGLEREVGTP
Ga0134077_101966042	3300012972	Grasslands Soil	MIDKESERKVTSWLRLGDWLTGRKAIEGRCDRCGGIGYLSVIGNQRLCAKCGLEREAVKP
Ga0134075_102256291	3300014154	Grasslands Soil	HMIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVIENQRLCAKCALEREAASP*
Ga0137418_100441003	3300015241	Vadose Zone Soil	MCSHTRPVIDKDSERTVTGWLRLGDRLTGRQSVEGPCDGCGRTAYLSEVDKQRLCAGCYLEGKGVAS*
Ga0137409_102196251	3300015245	Vadose Zone Soil	MIDKESENKVTSWLRLGDRLTGRKAIEGRCDRCGETGYLSVIEKERLCAKCGLEREEGGG
Ga0134089_105100541	3300015358	Grasslands Soil	MAGGTLVAALRNHMIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVIENQRLCAKCGLE
Ga0134112_101269092	3300017656	Grasslands Soil	MIDKESERKVTSWLRLGDRLTGRKAIEGRCDRCGETGYLSVIGNQRLCAKCGLEREAVKP
Ga0184605_100050523	3300018027	Groundwater Sediment	MIDKESERAVTGWLRLGDRLTGHTPVEGRCDRCDGTAYLTEAGKERLCARCCLEGKAAAS
Ga0184605_100055314	3300018027	Groundwater Sediment	MIDKEAERTVTGWLRLGDRLTGRTPVEGHCDRCDGTAYLTEAGSERLCARCCLEGKEAAS
Ga0184605_101399002	3300018027	Groundwater Sediment	MALQLRPRAIAMIDKESERAVVAWLRLGDRVAGRKPIDGQCDRCGGTGYLSLVETERLCAPCYLDGEAVAS
Ga0184605_101687123	3300018027	Groundwater Sediment	MIDRESERTVSVWLRLGDSLTGRTPVEGNCDRCGGTGYLTELEKQRLCARCCLEGKAA
Ga0184618_101002661	3300018071	Groundwater Sediment	MIDKEAERTVTGWLRLGDRLTGRTPVEGHCDRCDGTAYLTEAGSERLCARCCLEGKE
Ga0184618_101591341	3300018071	Groundwater Sediment	MIDKEAEQTVSGWLRLGDSLTGRTPVEGNCDRCGGTGYLTELEKQRLCARCCLEGKAA
Ga0066667_100957413	3300018433	Grasslands Soil	MPAGTSFAATHKSVIDKESERAVTGWLRLGDRMTGRKPVEGNCDRCHQIGYLSEAGSERICASCCLEGEAKAS
Ga0066669_100191126	3300018482	Grasslands Soil	MIDKESERAVTGWLRLGDRVTGRKPLEGRCDRCHETGYLSEVGGERICAGCCLEGEAAAS
Ga0066669_104314722	3300018482	Grasslands Soil	MIDKESERTVSGWLRLGDRLTGRKPVEGSCDRCGGAGYLSEVDKQRICAGCYLEGDGVAS
Ga0066669_111931082	3300018482	Grasslands Soil	VIDKESELTVTGWLRLGDRAIGRTPVEGRCDRCGGTAYLIEVRKQQLCARCCLEGEEAAS
Ga0066669_116971571	3300018482	Grasslands Soil	GRAPAGTSFATSRNSMIDKESERAVTGWLRLGDRLTGRKPLEGRCDRCHETGYLSEVGGERICASCCLEGEAAAS
Ga0184642_14107512	3300019279	Groundwater Sediment	MIDKESERAVTGWLRLGDRLTGHTPVEGRCDRCDGTAYLTDAGKERLCTRCCLEGEAAAS
Ga0193715_10332691	3300019878	Soil	MIDKESERTVSGWLRLGDRLTGRKPVEGRCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0193747_10342422	3300019885	Soil	MCAVTQVMIDKEAEQTVSGWLRLGDRVTGRESVEGRCDRCGAMGYLTELEKQRLCARCCLEGKAA
Ga0193721_10445272	3300020018	Soil	MIDKESERTVSGWVRLGDRLTGRTPVEGRCDGCGGTGYLSEVDKQRLCAGCYLEGKGVAS
Ga0193733_10043403	3300020022	Soil	MIDKESERTVSGWLRLGDWLTGRKPVEGRCDRCGGTGYLSEVDKHRICAGCYLEGDGVAS
Ga0210382_100491391	3300021080	Groundwater Sediment	MIDKESERTVTGWLRLGDRLTGRTPVEGHCDRCDGTAYLTDAGKERLCARCCLEGKAAA
Ga0210382_101621232	3300021080	Groundwater Sediment	TGWLRLGDRLTGRTPVEGHCDRCDGTAYLTDAGKERLCARCCLEGEAAAS
Ga0193719_100287074	3300021344	Soil	AIASGTAFASRLNPMIDKESERTVSGWLRLGDRLTGRKPVEGRCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0193719_101847821	3300021344	Soil	MIDKESEGAVVRWLRLGDRVAGRKPIDGRCDRCRRTGYLTLAESERICARCYLDGE
Ga0193695_10489152	3300021418	Soil	MIDKESERTVSGWLRLGDRLTGRKSVEGRCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0224452_10063355	3300022534	Groundwater Sediment	MIDKESERTVTGWLRLGDRLTGRTPVEGHCDRCDGTAYLTDAGKERLCTRCCLEGEAAAS
Ga0207645_106144032	3300025907	Miscanthus Rhizosphere	LGDRITGRKPIEGRGDRCGGTGYLSLVESERLCARCYLDGGSADS
Ga0207662_103652661	3300025918	Switchgrass Rhizosphere	IRWLHLGDRITGRKPIEGRCDRCSGTGYLSLVESERLCARCYLDGGSADS
Ga0209027_10082965	3300026300	Grasslands Soil	MPVAFYLLTSRNPMIDKDAKRTVTAWLRLGDRLTGRKPVEGPCDGCGETGYVTEFDKRRLCALCYLEGDAAGP
Ga0209239_12490391	3300026310	Grasslands Soil	KESELTVTGWLRLGDRAIGRTPVEGRCDRCGGTAYLIEVRKQQLCARCCLEGEEAAS
Ga0209159_10695323	3300026343	Soil	MIDKESERTVSGWLRLGDRLTGRASVEGLCDGCGGTGYLSEVDKQRLCAGCYLEGKGVAS
Ga0209690_11026953	3300026524	Soil	MIDKESERRVSGWLRLGDRLTGRTPVEGRCDRCGGTGYLTEVDKQRLCAVCMLEGEKAAP
Ga0209058_10706033	3300026536	Soil	MAGGTLVAALRNHMIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVIENQRLCAKCGLEREAARP
Ga0209058_11494352	3300026536	Soil	MIDKESERKVTSWLRLGDRLTGRKAIEGRCDRCGGIGYLSVIGNQRLCAKCGLEREAVKP
Ga0209157_10480001	3300026537	Soil	MAGGTLVAALRNHMIDKESERKVTSWLRLGDRMTGRKAIEGRCDRCGEAGYLSVIENQRLCAKCGL
Ga0209689_100161516	3300027748	Soil	MIDKESERAVTGWLRLGDRVTGRKPLEGRCDRCHGTGYLSEVGGERICASCCLEGEAAAS
Ga0209689_12458802	3300027748	Soil	MIDKESERTVSGWLRLGDRLTGRPSVEGLCDGCGGTGYLSEVDKQRLCAGCYLEGKGVAS
Ga0209590_109989942	3300027882	Vadose Zone Soil	IDKESERTVTGWLRLGDRLTGRKPVEGRCDRCGGIGYLTEVEKESLCSACYLEGKAAP
Ga0307293_100707003	3300028711	Soil	MIDKESERTVTGWLRLGDRLTGRTPVEGRCDRCDGTAYLTDAGKERLCARCCLEGEAAAS
Ga0307313_102290702	3300028715	Soil	ALAIASGTAFASRLNPMIDKESERTVSGWLRLGDRLTGRKPVEGRCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0307311_101431952	3300028716	Soil	MIDKESEGAVVRWLRLGDRVAGRKPIDGRCDRCRRTGYLTLAESERICARCYLDGEAVAS
Ga0307280_100031526	3300028768	Soil	GWLRLGDRLTGRKPVEGRCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0307282_101773951	3300028784	Soil	MIDKESERTVSVWLRLGDSLTGRTPVEGRCDGCGGTGYLTELEKQRLCARCCLEGKAA
Ga0307290_100661953	3300028791	Soil	MIDKESEGAVVRWLRLGDRVAGRKPIDGRCDRCRRTGYLTLAESERICARCYLDGEAVA
Ga0307292_100404434	3300028811	Soil	RWLRLGDRVAGRKPIDGRCDRCRRTGYLTLAESERICARCYLDGEAVAS
Ga0307310_103848751	3300028824	Soil	MIDKESERTVSGWLRLGDRLTGRKPVEGRCDRCGGTGYLREVDKQRICAGCYLEGDGVAS
Ga0307278_101903111	3300028878	Soil	PCATQGNPMIDQESERTVSGWLRLGDRLTGRKAVEGRCDRCGERRYLAEDDRERICAACYLEGEAAAS
Ga0307277_100488472	3300028881	Soil	MIDKDAERTVTGWLRLGDRLTGRKSVEGRCDRCGETGYLTDVAKQRLCARCYLEGDVTRP
Ga0307277_101611112	3300028881	Soil	VIDKESERAVSGWLRLGDRLTGRKPLEGRCDRCDGTGYLSEVNKERVCAGCYLEGDGVAS
Ga0307277_102801952	3300028881	Soil	MIDQESERAVVTWLRLGDRVAGRKPIDGRCDRCRGTGYLSLVESEHICARCYLDGEAVAS
Ga0307308_100577603	3300028884	Soil	MIDKESERTVSGWLRLGDWLTGRKPVEGRCDRCGGTGYLSEVDKQRICAGCYLEGDGVAS
Ga0308204_103353091	3300031092	Soil	KESERTVSVWLRLGDSLTGRTPVEGRCDGCGGTGYLTELEKQRLCARCCLEGKAA
Ga0307469_104664912	3300031720	Hardwood Forest Soil	MCGTTQPMIDQEAERTVSGWLRWGDRLIGRKPLEGRCDRCDEKRYLTEFARERLCTACYLAGEAAS
Ga0307471_1028725542	3300032180	Hardwood Forest Soil	APHVRHDATVIDQEAERTVSGWLRWGDRLIGRKPLEGRCDRCNEKRYLTEFARERLCTACYLAGEAAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086734

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences