Metagenome / Metatranscriptome Family F086720

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086720
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	60 residues
Representative Sequence	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Number of Associated Samples	69
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	48.18 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.182 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (76.364 % of family members)
Environment Ontology (ENVO)	Unclassified (79.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.33% β-sheet: 0.00% Coil/Unstructured: 51.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03354	TerL_ATPase	4.55
PF04860	Phage_portal	4.55
PF00263	Secretin	1.82
PF00528	BPD_transp_1	1.82
PF07045	DUF1330	0.91
PF01243	Putative_PNPOx	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	4.55
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
All Organisms	root	All Organisms	41.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
cellular organisms	root	All Organisms → cellular organisms	41.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.36 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.55 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	5.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.82 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	5.45 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	16.36 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	14.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.45 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.64 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	8.18 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.45 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	3.64 %
Marinovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum	0.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Rhodobacteraceae bacterium HIMB11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	7.27 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.45 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3.64 %
unclassified Marinovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum	0.91 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Rhodobacteraceae bacterium HIMB11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	7.27 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.45 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3.64 %
Marinovum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	0.91 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000051\|Botbay15_c036205	Not Available	918	Open in IMG/M
3300000973\|BBAY93_10015587	Not Available	2025	Open in IMG/M
3300000973\|BBAY93_10075927	Not Available	863	Open in IMG/M
3300001846\|ACM22_1055206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3303	Open in IMG/M
3300005510\|Ga0066825_10049801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	1488	Open in IMG/M
3300005837\|Ga0078893_10795005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	1133	Open in IMG/M
3300005837\|Ga0078893_11345275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	906	Open in IMG/M
3300006869\|Ga0075477_10262266	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	694	Open in IMG/M
3300006874\|Ga0075475_10366642	Not Available	584	Open in IMG/M
3300007640\|Ga0070751_1049403	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1852	Open in IMG/M
3300008012\|Ga0075480_10382367	Not Available	697	Open in IMG/M
3300009000\|Ga0102960_1359864	Not Available	514	Open in IMG/M
3300010296\|Ga0129348_1182549	Not Available	718	Open in IMG/M
3300012525\|Ga0129353_1125488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	1085	Open in IMG/M
3300016751\|Ga0182062_1287636	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300016781\|Ga0182063_1085896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	684	Open in IMG/M
3300016781\|Ga0182063_1605313	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300016797\|Ga0182090_1918730	Not Available	980	Open in IMG/M
3300017818\|Ga0181565_10026269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	4298	Open in IMG/M
3300017818\|Ga0181565_10126403	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300017818\|Ga0181565_10182067	Not Available	1453	Open in IMG/M
3300017818\|Ga0181565_10250127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1203	Open in IMG/M
3300017824\|Ga0181552_10528576	Not Available	553	Open in IMG/M
3300017824\|Ga0181552_10598826	Not Available	512	Open in IMG/M
3300017949\|Ga0181584_10089220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2121	Open in IMG/M
3300017949\|Ga0181584_10462388	Not Available	785	Open in IMG/M
3300017949\|Ga0181584_10468752	Not Available	779	Open in IMG/M
3300017949\|Ga0181584_10539694	Not Available	713	Open in IMG/M
3300017949\|Ga0181584_10787160	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300017951\|Ga0181577_10339987	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300017951\|Ga0181577_10441365	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	822	Open in IMG/M
3300017951\|Ga0181577_10504488	Not Available	756	Open in IMG/M
3300017951\|Ga0181577_10516632	Not Available	745	Open in IMG/M
3300017952\|Ga0181583_10348929	Not Available	931	Open in IMG/M
3300017956\|Ga0181580_10243117	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300017956\|Ga0181580_10649945	Not Available	675	Open in IMG/M
3300017957\|Ga0181571_10063798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	2537	Open in IMG/M
3300017957\|Ga0181571_10288261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1038	Open in IMG/M
3300017957\|Ga0181571_10351129	Not Available	921	Open in IMG/M
3300017957\|Ga0181571_10566876	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300017957\|Ga0181571_10833298	Not Available	545	Open in IMG/M
3300017957\|Ga0181571_10950608	Not Available	503	Open in IMG/M
3300017958\|Ga0181582_10781588	Not Available	569	Open in IMG/M
3300017964\|Ga0181589_10151080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1646	Open in IMG/M
3300017964\|Ga0181589_10390944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	918	Open in IMG/M
3300017964\|Ga0181589_10479488	Not Available	807	Open in IMG/M
3300017964\|Ga0181589_10704399	Not Available	633	Open in IMG/M
3300017964\|Ga0181589_11017402	Not Available	501	Open in IMG/M
3300017967\|Ga0181590_10610997	Not Available	745	Open in IMG/M
3300017968\|Ga0181587_10372925	Not Available	948	Open in IMG/M
3300017968\|Ga0181587_10559810	Not Available	736	Open in IMG/M
3300017969\|Ga0181585_10978537	Not Available	540	Open in IMG/M
3300017986\|Ga0181569_11019014	Not Available	534	Open in IMG/M
3300017986\|Ga0181569_11118284	Not Available	503	Open in IMG/M
3300018039\|Ga0181579_10028363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3869	Open in IMG/M
3300018039\|Ga0181579_10313982	Not Available	872	Open in IMG/M
3300018039\|Ga0181579_10391399	Not Available	753	Open in IMG/M
3300018049\|Ga0181572_10581390	Not Available	682	Open in IMG/M
3300018410\|Ga0181561_10452390	Not Available	579	Open in IMG/M
3300018413\|Ga0181560_10253682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	836	Open in IMG/M
3300018416\|Ga0181553_10509843	Not Available	642	Open in IMG/M
3300018417\|Ga0181558_10488174	Not Available	642	Open in IMG/M
3300018421\|Ga0181592_10034923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	4067	Open in IMG/M
3300018423\|Ga0181593_11082235	Not Available	546	Open in IMG/M
3300018424\|Ga0181591_10523013	Not Available	861	Open in IMG/M
3300018424\|Ga0181591_11025025	Not Available	559	Open in IMG/M
3300018426\|Ga0181566_10861919	Not Available	615	Open in IMG/M
3300018426\|Ga0181566_11016921	Not Available	558	Open in IMG/M
3300018876\|Ga0181564_10479809	Not Available	668	Open in IMG/M
3300019266\|Ga0182061_1462109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	1238	Open in IMG/M
3300019459\|Ga0181562_10198230	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300019459\|Ga0181562_10366354	Not Available	702	Open in IMG/M
3300019756\|Ga0194023_1109380	Not Available	560	Open in IMG/M
3300020052\|Ga0181554_1181710	Not Available	881	Open in IMG/M
3300020165\|Ga0206125_10127339	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300020173\|Ga0181602_10275894	Not Available	706	Open in IMG/M
3300020176\|Ga0181556_1288719	Not Available	566	Open in IMG/M
3300020176\|Ga0181556_1335563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	501	Open in IMG/M
3300020178\|Ga0181599_1086238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	1447	Open in IMG/M
3300020184\|Ga0181573_10089013	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300020184\|Ga0181573_10465485	Not Available	563	Open in IMG/M
3300020189\|Ga0181578_10425633	Not Available	571	Open in IMG/M
3300020191\|Ga0181604_10133221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1281	Open in IMG/M
3300020194\|Ga0181597_10152595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1182	Open in IMG/M
3300020810\|Ga0181598_1177016	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300021356\|Ga0213858_10170418	Not Available	1061	Open in IMG/M
3300021356\|Ga0213858_10432368	Not Available	615	Open in IMG/M
3300021364\|Ga0213859_10024964	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2798	Open in IMG/M
3300021364\|Ga0213859_10504249	Not Available	525	Open in IMG/M
3300021368\|Ga0213860_10086695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	1361	Open in IMG/M
3300021373\|Ga0213865_10050248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	2309	Open in IMG/M
3300021373\|Ga0213865_10067443	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1953	Open in IMG/M
3300021373\|Ga0213865_10285897	Not Available	774	Open in IMG/M
3300021379\|Ga0213864_10137961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1227	Open in IMG/M
3300021959\|Ga0222716_10713035	Not Available	531	Open in IMG/M
3300022905\|Ga0255756_1124931	Not Available	1084	Open in IMG/M
3300022905\|Ga0255756_1172993	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	820	Open in IMG/M
3300022922\|Ga0255779_1316559	Not Available	591	Open in IMG/M
3300022925\|Ga0255773_10207462	Not Available	879	Open in IMG/M
3300022929\|Ga0255752_10225105	Not Available	854	Open in IMG/M
3300022934\|Ga0255781_10240091	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300022937\|Ga0255770_10299385	Not Available	744	Open in IMG/M
3300023108\|Ga0255784_10110582	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300023108\|Ga0255784_10376831	Not Available	682	Open in IMG/M
3300023115\|Ga0255760_10348238	Not Available	707	Open in IMG/M
3300023115\|Ga0255760_10489947	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300023172\|Ga0255766_10006132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	9872	Open in IMG/M
3300023176\|Ga0255772_10153220	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300023273\|Ga0255763_1242814	Not Available	677	Open in IMG/M
3300023273\|Ga0255763_1355065	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.27%
Host-Associated	Host-Associated	2.73%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.27%
Algae	Host-Associated → Algae	1.82%
Porifera	Host-Associated → Porifera	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.45%
Green Algae	Host-Associated → Algae → Green Algae	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.91%
Unclassified	Host-Associated → Porifera → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	76.36%
Coastal	Environmental → Aquatic → Marine → Coastal	15.45%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.82%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.82%
River	Environmental → Aquatic → Freshwater → River	0.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.91%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.91%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.91%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	76.36%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.45%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.82%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.91%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	76.36%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	8.18%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.55%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	1.82%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.82%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.91%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.91%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.91%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.91%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.91%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.91%
Porifera Cymbastela Concentrica	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Porifera Cymbastela Concentrica	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000051	Porifera Cymbastela concentrica microbial communities from Botany Bay, Australia - sample 15	Host-Associated	Open in IMG/M
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001846	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25b	Environmental	Open in IMG/M
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300012525	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016751	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101408BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016781	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101409CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019266	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101407AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020052	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020184	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022905	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG	Environmental	Open in IMG/M
3300022922	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Botbay15_0362052	3300000051	Porifera Cymbastela Concentrica	MAFDVSNTTKILSAALQRVARLEPSLTHEEKETPAQTIAKGVTVSLSNDAKMHMLKDTFK
BBAY93_100155872	3300000973	Macroalgal Surface	MAFDVSNTTKILSAALQRVARLEPSLTHEEKETPAQTIAKGVTVSLSNDAKMHMLKDTLIKR*
BBAY93_100759272	3300000973	Macroalgal Surface	MAFDVSNTTKILSAALQRVSRLEPSLTREEKETPAETVAKGVTVSLSNDAKMQIMKDTLK
ACM22_10552063	3300001846	Marine Plankton	MAFDVSNTTKNLSAALQRVARLEPSLTRDEKETPAQTVVKKVTVSLINDAKTHILKDTMK
Ga0066825_100498012	3300005510	Marine	MAFNVSNTTKILSAALQRVARLEPSLTREEKEKPAQTVTKGVTVSLNNDAKMHIMKDMLK
Ga0078893_107950051	3300005837	Marine Surface Water	MAFDVSNTTKILSAALQRVVRLELSLTHDEKETPAQTVAKGVTVSLSNDAKMHILKGTL*
Ga0078893_113452752	3300005837	Marine Surface Water	MAFDVSNTTKILSAALQRVVRLEPSLTRDEKEAPAQTVAKGVTVSLSNDAKMHILKGTL*
Ga0075477_102622662	3300006869	Aqueous	MLWFPQVMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPVQTVAKGVTVSLSNDAKMHILKDTMK*
Ga0075475_103666421	3300006874	Aqueous	AFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTLK*
Ga0070751_10494035	3300007640	Aqueous	MVWFPQIMAFDVSNTTKILSVALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSTDAK
Ga0075480_103823671	3300008012	Aqueous	MVWFPQIMAFDVSNTTKILSAVLQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSTDAKMHILKDTLK*
Ga0102960_13598642	3300009000	Pond Water	MAFDVSNTTKILSAALQRVSRLEPSLMRDEKETPAQTVAKGVTVSLSHDAKMHILKDTMK
Ga0129348_11825491	3300010296	Freshwater To Marine Saline Gradient	MAFDVSNTTKILSATLQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAK
Ga0129353_11254882	3300012525	Aqueous	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDVKMHILKHTLK
Ga0182062_12876362	3300016751	Salt Marsh	MAFDVSNTTKILSAALQRAAKLEPSLTRDEKETPAQIVAKGVTVSLSNDAKMHIMKDTLK
Ga0182063_10858961	3300016781	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMQILKDTLK
Ga0182063_16053131	3300016781	Salt Marsh	MAFDVSSTTKILYAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKYTLK
Ga0182090_19187302	3300016797	Salt Marsh	FDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181565_100262691	3300017818	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETRAQTVAKGVTVSLSNDAKMQILKDTLK
Ga0181565_101264033	3300017818	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSHDAKMHILKDTMK
Ga0181565_101820674	3300017818	Salt Marsh	MAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181565_102501272	3300017818	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181552_105285761	3300017824	Salt Marsh	LTHMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181552_105988262	3300017824	Salt Marsh	MAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNNDAKMHIMKDTLK
Ga0181584_100892201	3300017949	Salt Marsh	NTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNNDAKMHIMKDTLK
Ga0181584_104623881	3300017949	Salt Marsh	MVWFPQIMAFDVSNTTKILSAVLQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0181584_104687523	3300017949	Salt Marsh	NTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181584_105396942	3300017949	Salt Marsh	MAFDVTNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTMK
Ga0181584_107871602	3300017949	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDA
Ga0181577_103399873	3300017951	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTMK
Ga0181577_104413652	3300017951	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTLAKGVTVSLSNDAKMQILKNT
Ga0181577_105044882	3300017951	Salt Marsh	MVWFTWIMAFDVSNTTKILSAALQRVTRLEPSLTRDEKETPAQIVAKGVTVSLSNDAKMHIMKDTLK
Ga0181577_105166322	3300017951	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTLK
Ga0181583_103489292	3300017952	Salt Marsh	MLWFPQVMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPVQTVAKGVTVSLSNDAKMHILKDTMK
Ga0181580_102431174	3300017956	Salt Marsh	MTFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTLK
Ga0181580_106499451	3300017956	Salt Marsh	MVWFPQIMAFDVSNTTKILSAVLQRVSRLELSLTRDEKETQAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0181571_100637981	3300017957	Salt Marsh	MAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLSNDAKMHIMKD
Ga0181571_102882611	3300017957	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTLK
Ga0181571_103511291	3300017957	Salt Marsh	PTRAFLTHMAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181571_105668762	3300017957	Salt Marsh	DVSNTTKILSAALQRVLRLEPSFTRDEKETPAQTLAKGVTVSLSNDAKVHILKDTMK
Ga0181571_108332981	3300017957	Salt Marsh	QTLPTRAFLPHMAFDVSNTTKILSAALQRVSRLEPSLTREEKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0181571_109506081	3300017957	Salt Marsh	MAFEVSNTTKILSAALQRVAKLEPSLTRDEKETPAQSVAKGVTVSLSNDAKMHIMKDTLK
Ga0181582_107815882	3300017958	Salt Marsh	MAFDVSNTTKILSAALQRASRLEPSLTRDEKETPAQTVAKGVTVSLSKDAKMQILKDTMK
Ga0181589_101510804	3300017964	Salt Marsh	MVWFPWVMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSHDAKMHILKDTMK
Ga0181589_103909443	3300017964	Salt Marsh	MAFEVSNTTKILSAALQRVSRLESSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181589_104794881	3300017964	Salt Marsh	NKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNNDAKMHIMKDTLK
Ga0181589_107043992	3300017964	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTHK
Ga0181589_110174021	3300017964	Salt Marsh	THMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181590_106109971	3300017967	Salt Marsh	LTLPNAAKPCFSPNMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181587_103729253	3300017968	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSHDAKMHIL
Ga0181587_105598101	3300017968	Salt Marsh	MAFDVSNTTKILSAVLQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0181585_109785372	3300017969	Salt Marsh	SAALQRVAKLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181569_110190142	3300017986	Salt Marsh	MAFDVSNTTKILSAALQRVLRLEPSFTRDEKETPAQTLAKGVTVSLSNDAKVHILKDTMK
Ga0181569_111182842	3300017986	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKM
Ga0181579_100283631	3300018039	Salt Marsh	LTHMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181579_103139822	3300018039	Salt Marsh	MVWFPQIMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0181579_103913991	3300018039	Salt Marsh	RAFLTHMAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181572_105813902	3300018049	Salt Marsh	MAFDVSNTTKILSAALQRFSRLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181561_104523902	3300018410	Salt Marsh	THMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181560_102536821	3300018413	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMQILKDTLK
Ga0181553_105098431	3300018416	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETRAQTVAKGVTVSLSNDAKMQILKDTL
Ga0181558_104881742	3300018417	Salt Marsh	LTHMTFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181592_100349236	3300018421	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLNNDAKMHIMKDTLK
Ga0181593_110822352	3300018423	Salt Marsh	MAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNNDAKMHIM
Ga0181591_105230133	3300018424	Salt Marsh	LTHMAFDVSNTTKILSAALQRVARLRPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181591_110250252	3300018424	Salt Marsh	MAFDVSNTTKILSAALQRVTRLEPSLTRDEKETPAQIVAKGVTVSLSNDAKMHIMKDTLK
Ga0181566_108619191	3300018426	Salt Marsh	IMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTLAKGVTVSLSNDAKMHILKDTM
Ga0181566_110169212	3300018426	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGITVSLSNDAKMHILKDTMK
Ga0181564_104798091	3300018876	Salt Marsh	SCQTLPTRAFLTHMAFDVSNTTKILSAALQRVARLEPSLTRDAKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0182061_14621091	3300019266	Salt Marsh	DVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181562_101982302	3300019459	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVALSHDAKMHILKDTMK
Ga0181562_103663543	3300019459	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0194023_11093801	3300019756	Freshwater	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAKTVAKGVTVSLSTDAKMHILKDTLK
Ga0181554_11817102	3300020052	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0206125_101273391	3300020165	Seawater	MAFEVSNTTKILSAALQRVARLEPSITREEKETPAQTIATGVAVSLSKNAKMHIMKDTLK
Ga0181602_102758941	3300020173	Salt Marsh	TLPTRAFLTHMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181556_12887192	3300020176	Salt Marsh	QTLPTRAFLTHMAFDVSNTTKILSAALQRVARLEPSLTRDAKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181556_13355631	3300020176	Salt Marsh	DVSNTTKILSAALQRVARLEPSLTRDEKETRAQTVAKGVTVSLSNDAKMQILKDTLK
Ga0181599_10862381	3300020178	Salt Marsh	MAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0181573_100890135	3300020184	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0181573_104654852	3300020184	Salt Marsh	QTLPTRAFLPHMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181578_104256331	3300020189	Salt Marsh	MAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNND
Ga0181604_101332212	3300020191	Salt Marsh	MAFEVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181597_101525953	3300020194	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTRDAKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0181598_11770161	3300020810	Salt Marsh	MTFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDT
Ga0213858_101704181	3300021356	Seawater	TLPTRAFLTHMAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNNDAKMHIMKDTLK
Ga0213858_104323681	3300021356	Seawater	MAFDVSNTTKILSAVLQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0213859_100249643	3300021364	Seawater	MVWFPQIMAFDVSNTTKILSAALQRVARLEPSLSRDAKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0213859_105042492	3300021364	Seawater	KILSAVLQRVTRLEPSLTRDEKETPAQIVAKGVTVSLSNDAKMHIMKDTLK
Ga0213860_100866951	3300021368	Seawater	MVWFPQIMAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSTDAKMHILKDTLK
Ga0213865_100502486	3300021373	Seawater	MAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNNDAKMHIMKD
Ga0213865_100674433	3300021373	Seawater	MAFDVSNTTKILSAVLQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSHDAKMHILKDTMK
Ga0213865_102858972	3300021373	Seawater	TNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLNNDAKMHIMKDTLK
Ga0213864_101379612	3300021379	Seawater	MAFDVSNTTKILSAALQRIARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTLK
Ga0222716_107130351	3300021959	Estuarine Water	CQTLPTRAFLTHMAFEVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0255756_11249311	3300022905	Salt Marsh	TRAFLTHMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0255756_11729931	3300022905	Salt Marsh	MAFDVSNTTKILSAVLQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSHDAKMHILK
Ga0255779_13165592	3300022922	Salt Marsh	QTRPTHAFLTHMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0255773_102074623	3300022925	Salt Marsh	HAFLTHMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0255752_102251053	3300022929	Salt Marsh	FDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0255781_102400913	3300022934	Salt Marsh	TKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHILKDTMK
Ga0255770_102993852	3300022937	Salt Marsh	RAFLPHMAFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0255784_101105822	3300023108	Salt Marsh	MTFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK
Ga0255784_103768312	3300023108	Salt Marsh	IMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDTL
Ga0255760_103482383	3300023115	Salt Marsh	MAFDVSNTNKILSAALQRVAKLEPWLTRDEKETPSQTVAKGVTVSLSNDA
Ga0255760_104899472	3300023115	Salt Marsh	MAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDA
Ga0255766_100061321	3300023172	Salt Marsh	HMAFDVSNTTKILSAALQRVARLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMQILKDTL
Ga0255772_101532201	3300023176	Salt Marsh	MTFDVSNTTKILSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKD
Ga0255763_12428142	3300023273	Salt Marsh	LTLPNAAKPCFSPNMAFDVSNTTKILSAALQRVARLEPSLTHDEKETPAQTVAKGVTVSLSNDAKMHIMKDT
Ga0255763_13550652	3300023273	Salt Marsh	LSAALQRVSRLEPSLTRDEKETPAQTVAKGVTVSLSNDAKMHIMKDTLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086720

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences