Metagenome Family F086706

Basic Information
Family ID	F086706
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	70 residues
Representative Sequence	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAPGEVVAAPNAGVRVAR
Number of Associated Samples	102
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.18 %
% of genes near scaffold ends (potentially truncated)	18.18 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (69.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.273 % of family members)
Environment Ontology (ENVO)	Unclassified (44.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (38.182 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.43% β-sheet: 0.00% Coil/Unstructured: 56.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02805	Ada_Zn_binding	26.36
PF08238	Sel1	4.55
PF08281	Sigma70_r4_2	4.55
PF08240	ADH_N	1.82
PF02566	OsmC	0.91
PF00593	TonB_dep_Rec	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	26.36
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.91
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	27.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	27.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	27.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	23.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_69_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_69_13	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10396751	Not Available	663	Open in IMG/M
3300003994\|Ga0055435_10005572	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300004058\|Ga0055498_10138468	Not Available	523	Open in IMG/M
3300004156\|Ga0062589_100076398	Not Available	2020	Open in IMG/M
3300004157\|Ga0062590_100046512	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300005205\|Ga0068999_10026440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	914	Open in IMG/M
3300005336\|Ga0070680_100529652	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1009	Open in IMG/M
3300005343\|Ga0070687_100498859	Not Available	819	Open in IMG/M
3300005345\|Ga0070692_10084866	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300005345\|Ga0070692_11353996	Not Available	512	Open in IMG/M
3300005468\|Ga0070707_100311191	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1531	Open in IMG/M
3300005471\|Ga0070698_100724599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300005546\|Ga0070696_100058246	All Organisms → cellular organisms → Bacteria	2698	Open in IMG/M
3300005829\|Ga0074479_10598820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	994	Open in IMG/M
3300006881\|Ga0068865_101611414	Not Available	584	Open in IMG/M
3300007004\|Ga0079218_10258113	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300007255\|Ga0099791_10154006	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300009038\|Ga0099829_10005672	All Organisms → cellular organisms → Bacteria	7612	Open in IMG/M
3300009089\|Ga0099828_10002811	All Organisms → cellular organisms → Bacteria	12065	Open in IMG/M
3300010399\|Ga0134127_10028831	All Organisms → cellular organisms → Bacteria	4408	Open in IMG/M
3300011270\|Ga0137391_10606372	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300011419\|Ga0137446_1102838	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300011427\|Ga0137448_1089855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	822	Open in IMG/M
3300011427\|Ga0137448_1112180	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300011436\|Ga0137458_1023980	Not Available	1520	Open in IMG/M
3300012035\|Ga0137445_1103801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300012040\|Ga0137461_1032232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1375	Open in IMG/M
3300012133\|Ga0137329_1054764	Not Available	525	Open in IMG/M
3300012171\|Ga0137342_1129704	Not Available	537	Open in IMG/M
3300012225\|Ga0137434_1019275	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300012226\|Ga0137447_1033876	Not Available	860	Open in IMG/M
3300012355\|Ga0137369_10515973	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300012360\|Ga0137375_10119741	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300012685\|Ga0137397_10064403	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
3300012922\|Ga0137394_10046539	All Organisms → cellular organisms → Bacteria	3569	Open in IMG/M
3300012927\|Ga0137416_11607775	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300012929\|Ga0137404_11112400	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012930\|Ga0137407_10031440	All Organisms → cellular organisms → Bacteria → Proteobacteria	4141	Open in IMG/M
3300012930\|Ga0137407_10529241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1102	Open in IMG/M
3300014269\|Ga0075302_1026120	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1074	Open in IMG/M
3300014308\|Ga0075354_1032991	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300014324\|Ga0075352_1095172	Not Available	774	Open in IMG/M
3300014873\|Ga0180066_1057638	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300014881\|Ga0180094_1076819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
3300014885\|Ga0180063_1239447	Not Available	581	Open in IMG/M
3300015241\|Ga0137418_10600030	Not Available	864	Open in IMG/M
3300015254\|Ga0180089_1010990	Not Available	1574	Open in IMG/M
3300015256\|Ga0180073_1013965	Not Available	1395	Open in IMG/M
3300015259\|Ga0180085_1060944	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1086	Open in IMG/M
3300017997\|Ga0184610_1211497	Not Available	649	Open in IMG/M
3300018000\|Ga0184604_10198230	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300018027\|Ga0184605_10020471	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
3300018028\|Ga0184608_10090914	Not Available	1264	Open in IMG/M
3300018031\|Ga0184634_10275358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	772	Open in IMG/M
3300018054\|Ga0184621_10150176	Not Available	839	Open in IMG/M
3300018059\|Ga0184615_10308723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300018075\|Ga0184632_10031529	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300018078\|Ga0184612_10260922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	893	Open in IMG/M
3300018079\|Ga0184627_10010010	All Organisms → cellular organisms → Bacteria	4427	Open in IMG/M
3300018084\|Ga0184629_10339648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	791	Open in IMG/M
3300018422\|Ga0190265_10023611	All Organisms → cellular organisms → Bacteria	4961	Open in IMG/M
3300018422\|Ga0190265_10255857	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300018422\|Ga0190265_10643195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_69_13	1181	Open in IMG/M
3300018429\|Ga0190272_10780171	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300019360\|Ga0187894_10342566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300019458\|Ga0187892_10026875	All Organisms → cellular organisms → Bacteria	4954	Open in IMG/M
3300019487\|Ga0187893_10067838	All Organisms → cellular organisms → Bacteria	3409	Open in IMG/M
3300019869\|Ga0193705_1084915	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300019879\|Ga0193723_1039816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1399	Open in IMG/M
3300019881\|Ga0193707_1026090	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300019883\|Ga0193725_1009671	All Organisms → cellular organisms → Bacteria	2744	Open in IMG/M
3300019997\|Ga0193711_1005286	Not Available	1614	Open in IMG/M
3300020002\|Ga0193730_1042731	Not Available	1312	Open in IMG/M
3300020003\|Ga0193739_1004809	All Organisms → cellular organisms → Bacteria	3642	Open in IMG/M
3300020018\|Ga0193721_1140584	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300020060\|Ga0193717_1128783	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300022694\|Ga0222623_10033325	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300025324\|Ga0209640_10978324	Not Available	653	Open in IMG/M
3300025899\|Ga0207642_10668448	Not Available	652	Open in IMG/M
3300025907\|Ga0207645_10039386	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300025917\|Ga0207660_10020226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4464	Open in IMG/M
3300025922\|Ga0207646_10399459	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1241	Open in IMG/M
3300025957\|Ga0210089_1020836	Not Available	767	Open in IMG/M
3300026285\|Ga0209438_1000260	All Organisms → cellular organisms → Bacteria	15406	Open in IMG/M
3300026320\|Ga0209131_1003137	All Organisms → cellular organisms → Bacteria	11048	Open in IMG/M
3300026360\|Ga0257173_1000884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2236	Open in IMG/M
3300026371\|Ga0257179_1001694	Not Available	1653	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10018477	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300027815\|Ga0209726_10086404	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300028536\|Ga0137415_10224927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1690	Open in IMG/M
3300028596\|Ga0247821_10710299	Not Available	657	Open in IMG/M
3300028791\|Ga0307290_10365223	Not Available	528	Open in IMG/M
3300028792\|Ga0307504_10368264	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300028812\|Ga0247825_10063150	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300028819\|Ga0307296_10124802	Not Available	1385	Open in IMG/M
3300028828\|Ga0307312_10587250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300028828\|Ga0307312_10910199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300030606\|Ga0299906_10506827	Not Available	924	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1128381	Not Available	557	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10000380	All Organisms → cellular organisms → Bacteria	10219	Open in IMG/M
3300031720\|Ga0307469_10017468	All Organisms → cellular organisms → Bacteria	3786	Open in IMG/M
3300031720\|Ga0307469_10465066	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1099	Open in IMG/M
3300031740\|Ga0307468_101815956	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300033233\|Ga0334722_10387653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1010	Open in IMG/M
3300033417\|Ga0214471_10001650	All Organisms → cellular organisms → Bacteria	17610	Open in IMG/M
3300033417\|Ga0214471_11308622	Not Available	548	Open in IMG/M
3300033513\|Ga0316628_101031819	Not Available	1092	Open in IMG/M
3300034155\|Ga0370498_119815	Not Available	622	Open in IMG/M
3300034164\|Ga0364940_0054708	Not Available	1079	Open in IMG/M
3300034177\|Ga0364932_0265858	Not Available	649	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.27%
Host-Associated	Host-Associated	2.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.55%
Aquatic	Environmental → Aquatic	32.73%
Plants	Host-Associated → Plants	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Sediment	Environmental → Aquatic → Sediment	26.36%
Marine	Environmental → Aquatic → Marine	3.64%
Freshwater	Environmental → Aquatic → Freshwater	2.73%
Cave	Environmental → Terrestrial → Cave	2.73%
Floodplain	Environmental → Terrestrial → Floodplain	1.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	26.36%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.64%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.73%
Lake	Environmental → Aquatic → Freshwater → Lake	1.82%
Sand	Environmental → Terrestrial → Soil → Sand	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	26.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.82%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.27%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	14.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.82%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.91%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012133	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_103967512	3300001661	Forest Soil	MDFNAYATEKIVAGRLADLRAARARTALLESAGVRPRGVGAAVGSAFIRLGRWLARGEAGAAPNAGVRVAR*
Ga0055435_100055724	3300003994	Natural And Restored Wetlands	MDLNVYVTEKIVAVRLADLRAAGARAALIESARVGPRGMGPALGGALIRLGRWLAQGEVVAASNAGVRVAR*
Ga0055498_101384682	3300004058	Natural And Restored Wetlands	MDLNIYATEMIAAGRLVELRAAGARAALADSARGGPRGVGPVVGSALIRLGRWLAQGEVVAASNAGVRVAR*
Ga0062589_1000763984	3300004156	Soil	MDFNLYATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALIRLGHWLASDEAGAVSNPGVRVARRA*
Ga0062590_1000465122	3300004157	Soil	MDFNPYATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALIRLGHWLASDEAGAVSNPGVRVARRA*
Ga0068999_100264401	3300005205	Natural And Restored Wetlands	MDLNIYATEMIAAGRLVELRAAGARAALADSARGGPRGVGPVVGSALIRLGRWLAQGEVVAAS
Ga0070680_1005296521	3300005336	Corn Rhizosphere	MDFNAYVVEKLTETRLADLRAAGARAALAESARVEPRGMGLAVGSALIRLGRWLAPGDVAAPNRGVRVGR*
Ga0070687_1004988591	3300005343	Switchgrass Rhizosphere	ATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALIRLGHWLASDEAGAVSNPGVRVARRA*
Ga0070692_100848661	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	YATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALIRLGHWLASDEAGAVSNPGVRVARRA*
Ga0070692_113539962	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MDINLYVTEKIVAERLAGLRAAGAQAALIRSARIGPRGVGPVLGEALIRLGHWLAPDDAGVPPNAGVRVARRA*
Ga0070707_1003111912	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDFNTYAAEKMAEARLTDLRAAAARAALIESARVGPRGVGPAVGGALIRLGRWLPQGETVAAPNAGVRVAR*
Ga0070698_1007245992	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDFNAYVVEKLAETRLADLRAARARAALAESARVEPHGVGPAVGSALIRLGRWLAQGEAVAAPNGGVRAGR*
Ga0070696_1000582464	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDFNAYVVEKLTETRLADLRAAGARAALAESARVEPRGMGLAVGSALIRLGRWLAPGDVAAPNGGVRVGR*
Ga0074479_105988202	3300005829	Sediment (Intertidal)	MDLNIYASEKIAAGRLVELRAAGARAALIELARVGPRGIGPALGGALIRVGRWLAQGEVVAASNAGVRVAR*
Ga0068865_1016114142	3300006881	Miscanthus Rhizosphere	MDFNLYATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALLRLGHWLASDEAGAVSNPGVRVARRA
Ga0079218_102581133	3300007004	Agricultural Soil	MDINTYALEKIANGRLTELRAAGARVALIESARIGPRGVGVAVGSALIRLGHWLAPAEEAAAPNA
Ga0099791_101540062	3300007255	Vadose Zone Soil	MDFNLYATEKIAAGRLADLRAASAQVALLESAGVGPRGVGAAVGSAFIRLGRWLAPGEGVAPNAGVRVAR*
Ga0099829_100056727	3300009038	Vadose Zone Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAPGEVVAAPNAGVRVAR*
Ga0099828_1000281110	3300009089	Vadose Zone Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR*
Ga0134127_100288317	3300010399	Terrestrial Soil	MDFNAYVVEKLTETRLADLRAAGARAALAEAARVEPRGMGPASGSALIRLGRWLAPGDVAAPNGGVRVGR*
Ga0137391_106063722	3300011270	Vadose Zone Soil	MDFNTYATEKIVAGRLADLRATSAQVALLESAGVGPRGVGAAVGSAFIRLGRWLAPGEGVAAPNAGVRVAR*
Ga0137446_11028382	3300011419	Soil	MDFNTYAVEKMMEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVGAAPNAGVRVAR*
Ga0137448_10898551	3300011427	Soil	MDFNTYAVEKMMEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR*
Ga0137448_11121801	3300011427	Soil	NTYAAEKMVEGRLADLRAAGARAALIASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR*
Ga0137458_10239803	3300011436	Soil	DFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGKVGAAPNAGVRVAR*
Ga0137445_11038011	3300012035	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAPGEVVAAPNAGVRV
Ga0137461_10322321	3300012040	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALIASARVGPRGVGPAVGGALIRLGRWLAPGE
Ga0137329_10547641	3300012133	Soil	MDFNTYAAEKMVEVRLADLRAAGAREALLASARVGPRGVGPAVGGALIRLGRWLAQGKVGAAANAGVRVAR*
Ga0137342_11297042	3300012171	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGVLIRLGRWLAPGEVVAAPNAGVRVAR*
Ga0137434_10192752	3300012225	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAPGEGVAAPNAGVRVAR*
Ga0137447_10338761	3300012226	Soil	ERRAVMDFNTYTAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGKVGAGPNAGVRVAR*
Ga0137369_105159731	3300012355	Vadose Zone Soil	MDFNIYAIEKIVAGRLADLRAAGARVVLLESAGVGPRGLGAAVGSTFIRLGRWLAPGERAAAPNAGVRVAR*
Ga0137375_101197412	3300012360	Vadose Zone Soil	MDFNIYATEKIVAGRLADLRAAGARVVLLESAGVGPRGLGAAVGSTFIRLGRWLAPGEGAAAPNAGVRVAR*
Ga0137397_100644035	3300012685	Vadose Zone Soil	MDFNLYATEKIAAGRLADLRAASAQAALIRTARIGPRGVGPVLGGALIRLGHWLAPDEAGAASNPGVRVARRA*
Ga0137394_100465392	3300012922	Vadose Zone Soil	MDFNAYATEMIVAGRLADLRAVRARTALLESAGVRPRGVGAAVGSAFIRLGRRLARGEAGAAPNAGVRVAR*
Ga0137416_116077752	3300012927	Vadose Zone Soil	ATEKIVAGRLADLRAAGARTALLESAGVRPRGVGAAVGSAFIRLGRWLARGEAGAAPNAGVRVAR*
Ga0137404_111124002	3300012929	Vadose Zone Soil	MDFNAYATEKIVAGRLADLRAAGARTALLESAGVRPRGVGSAVGSAFIRLGRWLARGEAGAAPNAGVRVAR*
Ga0137407_100314406	3300012930	Vadose Zone Soil	MDFNTYATEKIVAGRLADLRAARARAALLESAGVGPRGVGAAVGSAFIRLGRWLAPDEGVATPNAGVRVAR*
Ga0137407_105292412	3300012930	Vadose Zone Soil	MDFNAYATEKIVAGRLADLRAVRARTALLESAGVRPRGVGSAVGSAFIRLGRWLARGEAGAAPNAGVRVAR*
Ga0075302_10261202	3300014269	Natural And Restored Wetlands	MDLNVYVTEKIVAVRLADLRAAGARAALIESARVGPRGMGPALGGALIRLGRWLAQGEVVAASNAGVRGAR*
Ga0075354_10329912	3300014308	Natural And Restored Wetlands	MDLNIYATEMIAAGRLVGLRAAGARAALADSARGGPRGVGPVVGSALIRLGRWLAQGEVVAASNAGVRVAR*
Ga0075352_10951722	3300014324	Natural And Restored Wetlands	MDLNVYITEKIVAVRLADLRAAGARAALIESARVGPRGMGPALGGALIRLGRWLAQGEVVAASNAGVRVAR*
Ga0180066_10576382	3300014873	Soil	MDFNTYAAEKMVEVRLADLRAAGAREALLASARVGPRGVGPAVGGALIRLGRWLAQGKVGAAPNAGVRVAR*
Ga0180094_10768192	3300014881	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGRVLIRLGRWLAEGEVVAVANAGVRAAR*
Ga0180063_12394472	3300014885	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGVLIRLGRWLAEGEVV
Ga0137418_106000302	3300015241	Vadose Zone Soil	IVAGRLADLRAVRARTALLESAGVRPRGVGSAVGSAFIRLGRWLARGEAGAAPNAGVRVAR*
Ga0180089_10109902	3300015254	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVGAAPNAGVRVAR*
Ga0180073_10139653	3300015256	Soil	MVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGKVGAGPNAGVRVAR*
Ga0180085_10609444	3300015259	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALIASARVGPRGVGPAVGGALIRLGRWLAPGEGVAAPNAGVRVAR*
Ga0184610_12114972	3300017997	Groundwater Sediment	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0184604_101982301	3300018000	Groundwater Sediment	MDFNLYATEKIAAGRLADLRAASARVVLLESAGVGPRELGAAVGSTFIRLGRWLAPGEGAAAPNAGVRVAR
Ga0184605_100204713	3300018027	Groundwater Sediment	MDFNIYATEKIVAGHLADLRAAGARVVLLESAGVGPRGLGAAVGSAFIRFGRWLAPGEGAAAPNAGVRVAR
Ga0184608_100909141	3300018028	Groundwater Sediment	MDFNTYATEKIVAGRLADLRAAGARVVLLESAGVGPRGLGAAVGSTFIRLGRWLAPGEVVAAPNAGVRVAR
Ga0184634_102753581	3300018031	Groundwater Sediment	MDFNTYAVEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGSALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0184621_101501762	3300018054	Groundwater Sediment	MDFNTYAAEKMVEVRLADLRAAGARAALIASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0184615_103087232	3300018059	Groundwater Sediment	MDFNTYAVEKMMEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0184632_100315294	3300018075	Groundwater Sediment	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPTVGGALIRLGRWLAPGEVVAAPNAGVRVAR
Ga0184612_102609221	3300018078	Groundwater Sediment	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGRAVGGALIRLGRWLAPGEVVAAPNAGVRVAR
Ga0184627_100100106	3300018079	Groundwater Sediment	MDFNTYAAEKMVEVRLADLRAAGARAGLLASARVGPRGVGPAVGSALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0184629_103396482	3300018084	Groundwater Sediment	MEDNVYAIEVMVAQRLADLRAAGARAALVESGGSGHRGAAVVVGAGLIRLGRWLAQGEGVAAPNAGVRVAR
Ga0190265_100236114	3300018422	Soil	MDGNLYATEKMAAARLAELRADRTRAALVESARGGRRGAGVAVGSALIRLGRWFAGGEAVAAPNAGVRVGR
Ga0190265_102558574	3300018422	Soil	QLVQVRLADLRAAGARASLIESARVGPRGVRSALGGALIRLGHWLAPGEGVAAPNAGVRVAR
Ga0190265_106431953	3300018422	Soil	MDINTYALEKIANGRLTELRAAGARVALIESVRIGPRGVGVAVGSALIRLGHWLAPAEEAAAPNAGVRVAR
Ga0190272_107801712	3300018429	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALIASARVGPRGVGPAVGGALIRLGRWLAQGDVVAAPNAGVRVAR
Ga0187894_103425662	3300019360	Microbial Mat On Rocks	MDFNVYSVEKLVEVRLAELRAAGRRAALIESVRVGPRGLGPAVGGALIRLGHWLAQGEAVTAPNAGVRVAP
Ga0187892_100268757	3300019458	Bio-Ooze	MDLNVYSVEKLVEVRLAELRAAGRRAALIESVRVGPRGMGAAVGGALIRLGHWLAQREAVTAPNAGVRVAP
Ga0187893_100678382	3300019487	Microbial Mat On Rocks	MDLNVYSVEKLVEVRLAELRAAGRRAALIESVRVGPRGVGPAVGGALIRLGHWLAQREAVTAPNAGVRVAP
Ga0193705_10849152	3300019869	Soil	DFNIYATEKIVAGHLADLRAAGARVVLLESAGVGPRGLGAAVGSTFIRLGRWLAPGEGAAAPNAGVRVAR
Ga0193723_10398162	3300019879	Soil	MDFNLYATEKIAAGRLADLRSASAQAALVRAARIGPRGVAPVLGGALIRLGHWLAPDDAGVASNPGVRVARRA
Ga0193707_10260903	3300019881	Soil	MDFNTYATEKIVAGRLADLRAASAQVALLEAAGVGPRGVGAAVGSAFIRLGRWLAPGEGVAAPNAGVRVAR
Ga0193725_10096713	3300019883	Soil	MDFNTYATEKIVAGRLADLRAASAQVALLESAGVGPRGVGAAVGSAFIRLGRWLAPGEGVAAPNAGVRVAR
Ga0193711_10052863	3300019997	Soil	MDFNLYATEKIAAGRLADLRSASAQAALVRAARIGPRGAALVLGGALIRLGHWLAPDEAGVASNPGVRVARRA
Ga0193730_10427312	3300020002	Soil	MDFNIYATEKIVAGHLADLRAAGARVVLLESAGVGPRGLGAAVGSTFIRLGRWLAPGEGAAAPNAGVRVAR
Ga0193739_10048092	3300020003	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAPGEVVAAPNAGVRVAR
Ga0193721_11405842	3300020018	Soil	MDFNTYATEKIVAGRLADLRAAGARVVLLESAGVGPRGLGAAVGSTFIRLGRWLAPGEGAAAPNAGVRVAR
Ga0193717_11287831	3300020060	Soil	MDVNTYAIEKIADGRLADLRAAGARAALLESARLGPRGVGPAVGSALIRLGHWLAPDDAGAAPNAGVRVAR
Ga0222623_100333252	3300022694	Groundwater Sediment	MDLNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0209640_109783242	3300025324	Soil	MDFNTYAVEKMVEVRLADLRAAGARAALLASARVGPRGVGPAIGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0207642_106684482	3300025899	Miscanthus Rhizosphere	MDFNLYATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALIRLGHWLASDEAGAVSNPGVRVARRA
Ga0207645_100393863	3300025907	Miscanthus Rhizosphere	MDFNPYATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALIRLGHWLASDEAGAVSNPGVRVARRA
Ga0207660_100202267	3300025917	Corn Rhizosphere	MDFNAYVVEKLTETRLADLRAAGARAALAESARVEPRGMGLAVGSALIRLGRWLAPGDVAAPNRGVRVGR
Ga0207646_103994592	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDFNTYAAEKMAEARLTDLRAAAARAALIESARVGPRGVGPAVGGALIRLGRWLTQGETVAAPNAGVRVAR
Ga0210089_10208362	3300025957	Natural And Restored Wetlands	MDLNIYATEMIAAGRLVELRAAGARAALADSARGGPRGVGPVVGSALIRLGRWLAQGEVVAASNAGVRVVR
Ga0209438_100026012	3300026285	Grasslands Soil	MDFNLYATEKIVAGRLADLRAASAQAALIRTARIGPRGVGPVLGGALIRLGHWLAPDEAGAPSNPGVRVARRA
Ga0209131_10031378	3300026320	Grasslands Soil	MDFNLYATEKIVAGRLADLRAASAQAALIRTARIGPRGVGPVLGGALIRLGHWLAPDEAGAASNPGVRVARRA
Ga0257173_10008844	3300026360	Soil	MDFNTYAAEKMVEVRLADLRAAGARAAVLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0257179_10016944	3300026371	Soil	EKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR
(restricted) Ga0233416_100184772	3300027799	Sediment	MDYNVYATEKIAAGRLADLRAVRERIALVESARGRRRGVGAAVGAALIRVGRWLAQDEGVAAANAGVRLAR
Ga0209726_100864042	3300027815	Groundwater	MDFNIYAAEKMVEVRLADLRAAGARAALITSARVGPRGVGPAVGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0137415_102249273	3300028536	Vadose Zone Soil	MDFNAYATEKIVAGRLADLRAARARTALLESAGVRPRGVGAAVGSAFIRLGRWLARGEAGAAPNAGVRVAR
Ga0247821_107102991	3300028596	Soil	MDYNLYATEKIAAGRLADLRAASAQAALIRTARTGPRGVGPALGGALIRLGHWLASDEAGAVSNPGVRVARRA
Ga0307290_103652232	3300028791	Soil	MDFNIYATEKIVAGHLADLRAAGARVVLLESAGVGPRGLGAAVGSAFIRLGRWLAPGEGAAAPNAGVRVAR
Ga0307504_103682641	3300028792	Soil	MDFNLYATEKIAAGRLADLRAASAQAALIRTARVGPRGVGPVLGGALIRLGHWLAPDEVDVASNPGVR
Ga0247825_100631504	3300028812	Soil	MDINLYVTEKIVAERLAGLRAAGAQAALIRSARIGPRGVGPVLGEALIRLGHWLAPDDAGVPPNAGVRVARRA
Ga0307296_101248023	3300028819	Soil	MDFNTYATEKIVAGRLADLRAAGARVVLLESAGVGPRGLGAAVGSAFIRLGRWLAPGEGAAAPNAGVRVAR
Ga0307312_105872501	3300028828	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAPGEV
Ga0307312_109101991	3300028828	Soil	MDFNTYATEKIVAGRLADLRAARARAALLESAGVGPRGLGAAVGSAFIRLGRWLAPDEGVAAPNAGVRVAR
Ga0299906_105068272	3300030606	Soil	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAPGEGVAAPNAGVRVAR
(restricted) Ga0255311_11283811	3300031150	Sandy Soil	MDLNTYATEKIAAGRLADLRAACARVALIESAGVGPRGVGPVVGSALIRLGHWLAPDEAVAAPNAGVRVAR
(restricted) Ga0255310_100003809	3300031197	Sandy Soil	MDINLYVTEKIVADRLAGLRAAGAQAGLIRSARIGPRGVGPALGQALIRLGHWLAPDEAGGPPNPGVRVARRA
Ga0307469_100174683	3300031720	Hardwood Forest Soil	MDFNLYATEKIAAGRLADLRSASAQAALVSAARIGPRGVALVLGGALIRLGHWLAPDEAGVASNPGVRVARRA
Ga0307469_104650662	3300031720	Hardwood Forest Soil	MDLNTYAIEKIANGRLAELRAAGARVALIEAARIGPRGVGATVGSALIRLGHWLAPTEVAAPPNAGVRVVR
Ga0307468_1018159562	3300031740	Hardwood Forest Soil	MDFNAYVVEKLAETRLADLRAACAQATLAGSARAEPRGVRPAVGSALIRLGRWLAPGEVAAPNGGVRVGR
Ga0334722_103876532	3300033233	Sediment	MDVNTYAIEKLVAGRLADLRAVSARVALLRSARIGRRGVGVAVGAALIRLGHWLAPGEAVSVPNAGVRVAR
Ga0214471_100016509	3300033417	Soil	MDFNTYAVEKMVEGRLADLRAAGARAALLASARVGPRGVGPAIGGALIRLGRWLAQGEVVAAPNAGVRVAR
Ga0214471_113086221	3300033417	Soil	DFNTYAVEKMVEVRLADLRAAGARAALVESARVGPRGVGPAVGGALIRLGRWLASGEVVAAPNAGVRVAP
Ga0316628_1010318193	3300033513	Soil	MDLNMYATEKIVAARLADLRVASARVALIESAGVGPRGVGPVVGSALIRLGHWLAPDEAVAAPNAEVRVAR
Ga0370498_119815_360_575	3300034155	Untreated Peat Soil	MELNTYAIEKIAAGRLADLRAAGARAVLVESARIGPRGVGPAVGSALIRLGRWLAPDAVVAAPNAGVRVAR
Ga0364940_0054708_757_972	3300034164	Sediment	MDFNTYAAEKMVEVRLADLRAAGARAALLASARVGPRGVGPAVGGALIRLGRWLAQGEVVAPPNAGVRVAR
Ga0364932_0265858_205_420	3300034177	Sediment	MDFNTYAAEKMVEVRLADLRAAGAREALLASARVGPRGVGPAVGGALIRLGRWLAQGKVGAAANAGVRVAR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters