Metagenome Family F086686

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086686
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	42 residues
Representative Sequence	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPVAGGDTEIRIF
Number of Associated Samples	64
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.45 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (81.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.091 % of family members)
Environment Ontology (ENVO)	Unclassified (62.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.14% β-sheet: 17.14% Coil/Unstructured: 65.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04392	ABC_sub_bind	1.82
PF01068	DNA_ligase_A_M	1.82
PF00083	Sugar_tr	1.82
PF03401	TctC	0.91
PF02771	Acyl-CoA_dh_N	0.91
PF01434	Peptidase_M41	0.91
PF01494	FAD_binding_3	0.91
PF03237	Terminase_6N	0.91
PF02597	ThiS	0.91
PF06411	HdeA	0.91
PF00365	PFK	0.91
PF05036	SPOR	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.82
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.82
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.82
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.82
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.91
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.91
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.91
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.91
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.91
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.91
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.91
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
All Organisms	root	All Organisms	18.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
cellular organisms	root	All Organisms → cellular organisms	18.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.91 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.64 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.73 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.91 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.91 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.91 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.91 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.91 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.91 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.91 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10029440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1486	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10000602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7142	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1024654	Not Available	637	Open in IMG/M
3300005332\|Ga0066388_104186918	Not Available	735	Open in IMG/M
3300005332\|Ga0066388_107219425	Not Available	558	Open in IMG/M
3300005365\|Ga0070688_101566812	Not Available	537	Open in IMG/M
3300005434\|Ga0070709_11544210	Not Available	540	Open in IMG/M
3300005439\|Ga0070711_101701436	Not Available	553	Open in IMG/M
3300005764\|Ga0066903_102072365	Not Available	1094	Open in IMG/M
3300005764\|Ga0066903_103252171	Not Available	878	Open in IMG/M
3300005764\|Ga0066903_104679347	Not Available	728	Open in IMG/M
3300005764\|Ga0066903_105075951	Not Available	698	Open in IMG/M
3300005764\|Ga0066903_107603654	Not Available	558	Open in IMG/M
3300005764\|Ga0066903_108178461	Not Available	535	Open in IMG/M
3300005764\|Ga0066903_108637721	Not Available	518	Open in IMG/M
3300005764\|Ga0066903_109122038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300006954\|Ga0079219_11658248	Not Available	590	Open in IMG/M
3300010043\|Ga0126380_11601328	Not Available	581	Open in IMG/M
3300010359\|Ga0126376_10490199	Not Available	1135	Open in IMG/M
3300010359\|Ga0126376_11609380	Not Available	682	Open in IMG/M
3300010360\|Ga0126372_11362752	Not Available	740	Open in IMG/M
3300010361\|Ga0126378_12144233	Not Available	637	Open in IMG/M
3300010376\|Ga0126381_102185535	Not Available	796	Open in IMG/M
3300010376\|Ga0126381_104969086	Not Available	510	Open in IMG/M
3300010398\|Ga0126383_11780536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	704	Open in IMG/M
3300012948\|Ga0126375_10312242	Not Available	1097	Open in IMG/M
3300013296\|Ga0157374_11861351	Not Available	627	Open in IMG/M
3300015373\|Ga0132257_102154897	Not Available	721	Open in IMG/M
3300015374\|Ga0132255_106128916	Not Available	509	Open in IMG/M
3300016270\|Ga0182036_10670124	Not Available	837	Open in IMG/M
3300016294\|Ga0182041_10993700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	758	Open in IMG/M
3300016294\|Ga0182041_11579211	Not Available	605	Open in IMG/M
3300016319\|Ga0182033_10129424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1914	Open in IMG/M
3300016319\|Ga0182033_10251689	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300016341\|Ga0182035_10093137	Not Available	2187	Open in IMG/M
3300016341\|Ga0182035_10594798	Not Available	955	Open in IMG/M
3300016357\|Ga0182032_10591996	Not Available	922	Open in IMG/M
3300016357\|Ga0182032_11784522	Not Available	537	Open in IMG/M
3300016371\|Ga0182034_10679952	Not Available	874	Open in IMG/M
3300016387\|Ga0182040_10502076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	969	Open in IMG/M
3300016387\|Ga0182040_10590398	Not Available	898	Open in IMG/M
3300016387\|Ga0182040_11176040	Not Available	644	Open in IMG/M
3300016422\|Ga0182039_10775047	Not Available	850	Open in IMG/M
3300016422\|Ga0182039_11464712	Not Available	621	Open in IMG/M
3300016422\|Ga0182039_12279063	Not Available	500	Open in IMG/M
3300017930\|Ga0187825_10378893	Not Available	540	Open in IMG/M
3300017942\|Ga0187808_10434153	Not Available	603	Open in IMG/M
3300020581\|Ga0210399_11166032	Not Available	613	Open in IMG/M
3300021407\|Ga0210383_11776396	Not Available	503	Open in IMG/M
3300021560\|Ga0126371_10645118	Not Available	1207	Open in IMG/M
3300026550\|Ga0209474_10642684	Not Available	546	Open in IMG/M
3300026872\|Ga0207785_1008743	Not Available	937	Open in IMG/M
3300026981\|Ga0207822_1016289	Not Available	818	Open in IMG/M
3300031545\|Ga0318541_10177392	Not Available	1176	Open in IMG/M
3300031545\|Ga0318541_10501975	Not Available	679	Open in IMG/M
3300031573\|Ga0310915_10196355	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300031573\|Ga0310915_10264592	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300031679\|Ga0318561_10450647	Not Available	708	Open in IMG/M
3300031680\|Ga0318574_10689738	Not Available	599	Open in IMG/M
3300031708\|Ga0310686_113995518	Not Available	505	Open in IMG/M
3300031719\|Ga0306917_10794259	Not Available	742	Open in IMG/M
3300031719\|Ga0306917_10824880	Not Available	727	Open in IMG/M
3300031719\|Ga0306917_11207069	Not Available	587	Open in IMG/M
3300031744\|Ga0306918_10000911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14205	Open in IMG/M
3300031744\|Ga0306918_10116014	Not Available	1932	Open in IMG/M
3300031778\|Ga0318498_10019003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2890	Open in IMG/M
3300031781\|Ga0318547_10284180	Not Available	1003	Open in IMG/M
3300031796\|Ga0318576_10313745	Not Available	741	Open in IMG/M
3300031820\|Ga0307473_11247363	Not Available	554	Open in IMG/M
3300031845\|Ga0318511_10273529	Not Available	760	Open in IMG/M
3300031846\|Ga0318512_10535553	Not Available	595	Open in IMG/M
3300031879\|Ga0306919_11334106	Not Available	543	Open in IMG/M
3300031890\|Ga0306925_10008820	All Organisms → cellular organisms → Bacteria → Proteobacteria	9584	Open in IMG/M
3300031890\|Ga0306925_10313484	Not Available	1686	Open in IMG/M
3300031890\|Ga0306925_11905299	Not Available	565	Open in IMG/M
3300031910\|Ga0306923_10137411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2783	Open in IMG/M
3300031910\|Ga0306923_10462027	Not Available	1439	Open in IMG/M
3300031912\|Ga0306921_10170422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2550	Open in IMG/M
3300031912\|Ga0306921_11560538	Not Available	719	Open in IMG/M
3300031912\|Ga0306921_11837343	Not Available	650	Open in IMG/M
3300031942\|Ga0310916_10948966	Not Available	719	Open in IMG/M
3300031942\|Ga0310916_11439498	Not Available	563	Open in IMG/M
3300031945\|Ga0310913_10147181	Not Available	1626	Open in IMG/M
3300031945\|Ga0310913_10171737	Not Available	1506	Open in IMG/M
3300031947\|Ga0310909_11035557	Not Available	669	Open in IMG/M
3300031947\|Ga0310909_11149038	Not Available	629	Open in IMG/M
3300031947\|Ga0310909_11541822	Not Available	528	Open in IMG/M
3300031954\|Ga0306926_10983520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1005	Open in IMG/M
3300031954\|Ga0306926_11477016	Not Available	785	Open in IMG/M
3300031954\|Ga0306926_12609842	Not Available	551	Open in IMG/M
3300032001\|Ga0306922_10117011	Not Available	2832	Open in IMG/M
3300032001\|Ga0306922_10730299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1040	Open in IMG/M
3300032001\|Ga0306922_11442593	Not Available	690	Open in IMG/M
3300032001\|Ga0306922_11715064	Not Available	621	Open in IMG/M
3300032001\|Ga0306922_12064365	Not Available	553	Open in IMG/M
3300032035\|Ga0310911_10046202	Not Available	2249	Open in IMG/M
3300032035\|Ga0310911_10572572	Not Available	655	Open in IMG/M
3300032035\|Ga0310911_10732712	Not Available	572	Open in IMG/M
3300032042\|Ga0318545_10137409	Not Available	866	Open in IMG/M
3300032042\|Ga0318545_10313675	Not Available	564	Open in IMG/M
3300032060\|Ga0318505_10494763	Not Available	577	Open in IMG/M
3300032076\|Ga0306924_10238290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2089	Open in IMG/M
3300032076\|Ga0306924_11158737	Not Available	839	Open in IMG/M
3300032076\|Ga0306924_11160216	Not Available	838	Open in IMG/M
3300032180\|Ga0307471_102460108	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300032180\|Ga0307471_103035366	Not Available	595	Open in IMG/M
3300032261\|Ga0306920_101017359	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300032261\|Ga0306920_101340372	Not Available	1028	Open in IMG/M
3300033289\|Ga0310914_10094868	Not Available	2556	Open in IMG/M
3300033289\|Ga0310914_11757682	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.27%
Host-Associated	Host-Associated	2.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.45%
Plants	Host-Associated → Plants	2.73%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.45%
Freshwater	Environmental → Aquatic → Freshwater	1.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.82%
Loam	Environmental → Terrestrial → Soil → Loam	13.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100294403	3300000597	Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLVATVVAVTDGDTEIRIFRCPNCS
AF_2010_repII_A001DRAFT_100006021	3300000793	Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLVATVVAVSDGDTEIRIFR
AF_2010_repII_A10DRAFT_10246541	3300000816	Forest Soil	MSKFERVLEAGSTELPDCRCSAEMQLTAVVPLSGDGSQV
Ga0066388_1041869182	3300005332	Tropical Forest Soil	MGGVMSKFERLLEVGSTELPDCRCTAEMNLMAVVPVPGGD
Ga0066388_1072194251	3300005332	Tropical Forest Soil	MGGVMSKFERLLVAGSTELPDFRCNAEMNLTAIVTGPGGDTEIRVFRCP
Ga0070688_1015668121	3300005365	Switchgrass Rhizosphere	MSKFERLLDVGSTELPDCRCSAEMNLMAIKPLAGADTEIRIF
Ga0070709_115442103	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSKFERLLEAGSTELPDCRCAAEMNLIAIVPKAGGDTEIRIFRCP
Ga0070711_1017014362	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSKFERLLEAGSTELPDCRCTAEMNLMAVVPMDGGDTEIRIFRC
Ga0066903_1020723651	3300005764	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGGDTEIRIFRCPDCNH
Ga0066903_1032521714	3300005764	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPIAGGD
Ga0066903_1046793471	3300005764	Tropical Forest Soil	MSKFERLLKAGSTALPDCRCTAEMNLTAIVPGPGGDTEI
Ga0066903_1050759511	3300005764	Tropical Forest Soil	MSKFERLLVAGSTELPECRCTAEMHLTAIVPVPSGDTEIRIFRCPD
Ga0066903_1076036541	3300005764	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMSLMAIVPVADGDTEIRIFRCPDCS
Ga0066903_1081784611	3300005764	Tropical Forest Soil	MGIGGVMSKFERLLVAGSTELPDCRCAAEMNLIAIVPVPGGDTE
Ga0066903_1086377212	3300005764	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPGPSGDTEIR
Ga0066903_1091220383	3300005764	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPGPGGDTEIRIFR
Ga0079219_116582481	3300006954	Agricultural Soil	MSKFERVLATGSTELPDCRCSAEMHLISILPMPGASS
Ga0126380_116013282	3300010043	Tropical Forest Soil	MSKFERLLESGSTELPDCRCAAEMNLMAIVPVPGG
Ga0126376_104901991	3300010359	Tropical Forest Soil	MGGVMSKFERLLEVGSTELPDCRYTAEMNLMAVVPVPG
Ga0126376_116093801	3300010359	Tropical Forest Soil	MSKFERLLEPGSTELPDCRCAAEMNLMAIVPVPGGDTEIRIFR
Ga0126372_113627521	3300010360	Tropical Forest Soil	MSKFERLLVAGSTELPDCRCATEMHLTAIVPVPGGDTEIRI
Ga0126378_121442331	3300010361	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCGAEMKLTAIVPVAGGDTEIRIFQC
Ga0126381_1021855351	3300010376	Tropical Forest Soil	MSKFERLLVAGSTELPDCRCATEMHLTAIVPVPGGDTEIRIFRCPDCS
Ga0126381_1049690862	3300010376	Tropical Forest Soil	MSKFERLLQPGSTELPDCRCAAEMNLMAIVPMDGGDTEIR
Ga0126383_117805361	3300010398	Tropical Forest Soil	MSKFERLLEADSTELPDCRCAAEMNLMAIVPAGGDTEIRTF
Ga0126375_103122421	3300012948	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLMGIVPGPGGDSEI
Ga0157374_118613511	3300013296	Miscanthus Rhizosphere	MSKFERLLEAGSTELPDCRCAAEMTLMAIVPMDGGDTEIR
Ga0132257_1021548971	3300015373	Arabidopsis Rhizosphere	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPKAGGDTEIRIF
Ga0132255_1061289162	3300015374	Arabidopsis Rhizosphere	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPMDGG
Ga0182036_106701241	3300016270	Soil	MSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGG
Ga0182041_109937003	3300016294	Soil	MSKYERVLAAGSTELPDCRCSGEMHLISIVPMPGGDSEIRIFRCRDC
Ga0182041_115792111	3300016294	Soil	MSKFERLLEAGSTELPDCRCAAEMKLMAIVPEAGDDTEIRIFRCPD
Ga0182033_101294241	3300016319	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPGPGGDTEIRIF
Ga0182033_102516894	3300016319	Soil	MGRVMSKFERLLEAGSTELPDCRCAAEMKLMAIVP
Ga0182035_100931371	3300016341	Soil	MSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGGDTEIR
Ga0182035_105947981	3300016341	Soil	MSKFERLLEPGSTELPDCRCAAEMNLMAIVPVPGGDSE
Ga0182032_105919962	3300016357	Soil	MSKFERLLEADSTELPDCRCGAEMKLTAIVPVAGGDAEIRIFQCPDC
Ga0182032_117845221	3300016357	Soil	MSKFERLLEAGSTELPDCRCTAEMHLIAILPVPGGDTEIRIFRCPD
Ga0182034_106799522	3300016371	Soil	MSKFERLLEAGSTELPDCRCAAEMSLMAIVPVAGGDTE
Ga0182040_105020763	3300016387	Soil	MSKFERLLEAGSTELPDCRCTAEMHLIAIAPVPDGISEIRIYRCPKC
Ga0182040_105903981	3300016387	Soil	MSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGGDTEIRIFRCP
Ga0182040_111760401	3300016387	Soil	MSKFERVLAAGSTELPDCRCSVEMHLISVLPVPGGGSE
Ga0182039_107750473	3300016422	Soil	MSKFERLLVAGSTELPDCRCTAEMNLMAIVPAGVDTEIRI
Ga0182039_114647121	3300016422	Soil	MSKFERVLAAGSTELPDCRCSVEMHLISIVPMPGTGSEIRIFRC
Ga0182039_122790631	3300016422	Soil	MSKFERLLVAGSTELPDCRCAAEMNLMAIVPVAGGDTEIRIFRCPNCSHE
Ga0187825_103788931	3300017930	Freshwater Sediment	MSKLERVLEAGSTELPDCRCGAEMKLVGTTPSHKSSDTEIRFYECSACGH
Ga0187808_104341532	3300017942	Freshwater Sediment	MSKFERLLEAGSTELPDCRCRAEMRLVDTVPVVGGGSEVRIFRCPDC
Ga0210399_111660323	3300020581	Soil	MSKFERLLEAGSTELPDCRCTAEMNLMAIVPRADG
Ga0210383_117763963	3300021407	Soil	MSKFERVLEPGSTELPDCRCAAEMNLMAIVPVSGGDTEIRIFRCPDC
Ga0126371_106451181	3300021560	Tropical Forest Soil	MSKLERVLAVDSTELPDCRCRVEMHLISIVPVPDGGSEIRL
Ga0209474_106426842	3300026550	Soil	MSKFERLLEAGSTELPDCRCSAEMRLTGIVPVPDGDS
Ga0207785_10087431	3300026872	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPVAGGDTEIRIFRCPD
Ga0207822_10162891	3300026981	Tropical Forest Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPVAGGDTEIRIFRCPNCN
Ga0318541_101773921	3300031545	Soil	MSKFERLLEASSTELPDCRCGAEMKLTAIVPVAGGDT
Ga0318541_105019752	3300031545	Soil	MSKFERLLEAGSTELPDCRCAAQMNLTAIVPVAGGDTEIRIFRCPD
Ga0310915_101963551	3300031573	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPVAGGD
Ga0310915_102645921	3300031573	Soil	MSKFERLLEAGSTELPDCRCAAEMNLTAIVPVAGGDSEIRIFRCPQCRSEL
Ga0318561_104506472	3300031679	Soil	MSKFERLLEAGSTELPDCRCAAEMSLMAIVPVAGGDTEI
Ga0318574_106897381	3300031680	Soil	MSKFERVLAEGSTDLPDCRCSVEMQLTSIVPVPGGGSET
Ga0310686_1139955181	3300031708	Soil	MSKLERLLVAGSTELPDCRCTAEMQLIAVVPVPGGDTEIRIFRCPD
Ga0306917_107942592	3300031719	Soil	MSKFERLLVAGSTELPDCRCAAEMHLTAIVPVPGGDTEIRIFR
Ga0306917_108248801	3300031719	Soil	MSKFERLLEADSTELPDCRCGAEMKLTAIVPVAGGDA
Ga0306917_112070692	3300031719	Soil	MSKFERLLVAGSTELPDCSCAAEMNLMAIVPVAGGDTE
Ga0306918_100009111	3300031744	Soil	MSKFERLLEPGSTELPDCRCAAEMNLMAIVPVPGGDSEI
Ga0306918_101160141	3300031744	Soil	MSKFERLLEAGSTELPDCRCTAEMQLMAIVPVAGCDSEIRV
Ga0318498_100190031	3300031778	Soil	MSKFERLLEAGSTELPDCRCAAEMNLVATVVAVTDGDT
Ga0318547_102841801	3300031781	Soil	MSKFERLLEAGSTELPDCRCAAEMNLIAIVPMSGGD
Ga0318576_103137452	3300031796	Soil	MSKFERLLVAGSTELPDCRCTAEMHLMAIVPVLGGDTEIRIFRCPDCSH
Ga0307473_112473631	3300031820	Hardwood Forest Soil	MSKFERLLEAGSTELPDCRCGAEMKLTAIVPVAGGDTEIRIFR
Ga0318511_102735293	3300031845	Soil	MSKFERLLVAGSTELPDCRCATEMHLTAIVPVPGGDTEIRIFRCPD
Ga0318512_105355531	3300031846	Soil	MSKFERLLEAGSTELPDCRCAAEMNLIAIVPMSGGDTEIRIFRCPKC
Ga0306919_113341061	3300031879	Soil	MTKFERVLAATGSTELPDCRCSRAMNLLSIVPEPGDGFRDSHF
Ga0306925_100088201	3300031890	Soil	MSKFERLLEAGSTELPDCRCAAEMSLMAIVPVAGGDTEIRIFRCPDCS
Ga0306925_103134841	3300031890	Soil	MSKFERLLEAGSTELPDCRCAAEMNLIAIVPMSGGDTEIRIFRCPKCSHEL
Ga0306925_119052991	3300031890	Soil	MSKFERVLAAGSTELPDCRCSVEMRLISIVPVPGGGSEIRIFQCP
Ga0306923_101374114	3300031910	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAVVPGPGGDTEIR
Ga0306923_104620271	3300031910	Soil	MSKFERLLEAGSTELPDCRCTAAMDLIAILPVSGGDTEIR
Ga0306921_101704225	3300031912	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPGPGG
Ga0306921_115605382	3300031912	Soil	MSKFERLLVAGSTELPDCRCAAEMHLTAIVPVLGGDTEIRIFRCPDC
Ga0306921_118373431	3300031912	Soil	MSKFERLLVAGSTELPDCRCTAEMQLISIVPAGGISEI
Ga0310916_109489662	3300031942	Soil	MSKFERLLVAGSTELPDCRCTAEMHLMAIVPVLGGDTEIRIFRCPECS
Ga0310916_114394981	3300031942	Soil	MSKFERLLVAGSTELPDCRCATEMHLTAIVPVPGGDTEIRIFRC
Ga0310913_101471815	3300031945	Soil	MSKFERLLEAGSTELPDCRCAAEMNLVATVVAVSDGDTEIRIFRCPHCN
Ga0310913_101717372	3300031945	Soil	MSKFERLLVAGSTELPDCRCTAEMNLTAIVPAGVDTEIRVFRCPHC
Ga0310909_110355571	3300031947	Soil	MSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGGDTEIRIFR
Ga0310909_111490381	3300031947	Soil	MSKFERLLEAGSTELPDCRCAAEMNLVATVVAVTDGDTEIRIFRC
Ga0310909_115418221	3300031947	Soil	MSKFERLLEAGSTELPDCRCTAEMNLMAIVPVAGG
Ga0306926_109835203	3300031954	Soil	MGTGVSMSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGGDTEIRIFRCPDC
Ga0306926_114770161	3300031954	Soil	MSKFERLLVAGSTELPDCRCTAEMQLISIVPAGGISEIRI
Ga0306926_126098421	3300031954	Soil	MGGVMSKFERLLEAGSTELPDCRCAAEMNLTAIVP
Ga0306922_101170115	3300032001	Soil	MSKFERLLEASSTELPDCRCGAEMKLTAIVPVAGGDAEIRIF
Ga0306922_107302991	3300032001	Soil	MSKFERLLEAGSTELPDCRCTAEMNLMAIVPVVGGDTE
Ga0306922_114425931	3300032001	Soil	MSKFERLLVAGSTELPDCRCTAEMQLIYIVPAGGISEIRI
Ga0306922_117150642	3300032001	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPVAGGDTEIRIF
Ga0306922_120643651	3300032001	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPTAGGDTEI
Ga0310911_100462024	3300032035	Soil	MSKFERLLVAGSTELPDCRCTAEMHLMAIVPVPGG
Ga0310911_105725721	3300032035	Soil	MSKFERLLVAGSTELPDCRCTAEMQLISIVPAGGISEIRIF
Ga0310911_107327121	3300032035	Soil	MGTGVSMSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGGDTEIRIFRCPDCNHE
Ga0318545_101374091	3300032042	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPAPGG
Ga0318545_103136752	3300032042	Soil	MSKFERLLEAGSTELPDCRCAAEMNLIAIVPMSGGDTEIR
Ga0318505_104947631	3300032060	Soil	MSKFERLLVAGSTELPDCRCATEMRLTAIVPVPGG
Ga0306924_102382901	3300032076	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPVAGGDTEIRIFRC
Ga0306924_111587371	3300032076	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPVAGGDTEIRIFRCPDCSH
Ga0306924_111602161	3300032076	Soil	MSKFERLLDAGSTELPDCRCGAEMKLTAIVPVAGGDTEIRVFQCPDCS
Ga0307471_1024601083	3300032180	Hardwood Forest Soil	MSKFERVLEPGSTELPDCRCAAEMNLMAIVPVSGGDTEIRIFR
Ga0307471_1030353661	3300032180	Hardwood Forest Soil	MSKFERLLEAGSTELPDCRCAAEMSLMAIVPVAGGDTEIRIFRCPDCSHE
Ga0306920_1010173594	3300032261	Soil	MSKFERVLAAGSTELPDCRCSVEMHLISVLPVPGGGSEIR
Ga0306920_1013403721	3300032261	Soil	MSKFERLLEAGSTELPDCRCAAEMNLMAIVPGPGGDTEIRIFRCPHCSHE
Ga0310914_100948687	3300033289	Soil	MSKFERLLEAGSTELPDCRCAAEMNLLAIVPVAGGDTEIRIFRC
Ga0310914_117576822	3300033289	Soil	MSKFERVLAAGSTELPDCRCSVEMHLISIVPMPGTGSEIRIFRCPDCYH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086686

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences