Metagenome Family F086657

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086657
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	61 residues
Representative Sequence	MHFSFWQKQRVINGQRFGRRFPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFAP
Number of Associated Samples	17
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	54.55 %
% of genes from short scaffolds (< 2000 bps)	79.09 %
Associated GOLD sequencing projects	9
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.364 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (87.273 % of family members)
Environment Ontology (ENVO)	Unclassified (87.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 0.00% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00078	RVT_1	1.82
PF00075	RNase_H	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
All Organisms	root	All Organisms	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
cellular organisms	root	All Organisms → cellular organisms	29.09 %
Viruses	superkingdom	All Organisms → Viruses	4.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007516\|Ga0105050_10292967	Not Available	995	Open in IMG/M
3300007516\|Ga0105050_10552426	Not Available	675	Open in IMG/M
3300007516\|Ga0105050_10737755	Not Available	565	Open in IMG/M
3300007516\|Ga0105050_10873983	Not Available	509	Open in IMG/M
3300007519\|Ga0105055_10003988	All Organisms → cellular organisms → Bacteria	21928	Open in IMG/M
3300007519\|Ga0105055_10012000	Not Available	10605	Open in IMG/M
3300007519\|Ga0105055_10019501	All Organisms → cellular organisms → Bacteria	7753	Open in IMG/M
3300007519\|Ga0105055_10027850	Not Available	6291	Open in IMG/M
3300007519\|Ga0105055_10061592	Not Available	4002	Open in IMG/M
3300007519\|Ga0105055_10071639	All Organisms → cellular organisms → Bacteria	3669	Open in IMG/M
3300007519\|Ga0105055_10091689	Not Available	3182	Open in IMG/M
3300007519\|Ga0105055_10135812	Not Available	2516	Open in IMG/M
3300007519\|Ga0105055_10152417	Not Available	2341	Open in IMG/M
3300007519\|Ga0105055_10161309	Not Available	2258	Open in IMG/M
3300007519\|Ga0105055_10219931	All Organisms → Viruses → Predicted Viral	1844	Open in IMG/M
3300007519\|Ga0105055_10275293	Not Available	1579	Open in IMG/M
3300007519\|Ga0105055_10312583	Not Available	1442	Open in IMG/M
3300007519\|Ga0105055_10336193	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300007519\|Ga0105055_10585151	Not Available	903	Open in IMG/M
3300007519\|Ga0105055_10900645	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300007519\|Ga0105055_11007339	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300007519\|Ga0105055_11043197	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300007519\|Ga0105055_11117357	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300007520\|Ga0105054_10132050	Not Available	2514	Open in IMG/M
3300007520\|Ga0105054_10160881	Not Available	2219	Open in IMG/M
3300007520\|Ga0105054_10278208	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300007520\|Ga0105054_10317606	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300007520\|Ga0105054_10328715	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300007520\|Ga0105054_10431082	Not Available	1108	Open in IMG/M
3300007520\|Ga0105054_10454837	Not Available	1063	Open in IMG/M
3300007520\|Ga0105054_10510360	Not Available	972	Open in IMG/M
3300007520\|Ga0105054_10571259	Not Available	891	Open in IMG/M
3300007520\|Ga0105054_10620876	Not Available	835	Open in IMG/M
3300007520\|Ga0105054_10667730	Not Available	789	Open in IMG/M
3300007520\|Ga0105054_10735939	Not Available	732	Open in IMG/M
3300007520\|Ga0105054_10909585	Not Available	623	Open in IMG/M
3300007520\|Ga0105054_11196479	Not Available	511	Open in IMG/M
3300007522\|Ga0105053_10024121	All Organisms → cellular organisms → Bacteria	6687	Open in IMG/M
3300007522\|Ga0105053_10124518	All Organisms → Viruses → Predicted Viral	2599	Open in IMG/M
3300007522\|Ga0105053_10179103	Not Available	2071	Open in IMG/M
3300007522\|Ga0105053_10360835	Not Available	1271	Open in IMG/M
3300007522\|Ga0105053_10390746	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300007522\|Ga0105053_10467192	Not Available	1045	Open in IMG/M
3300007522\|Ga0105053_10656800	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300007522\|Ga0105053_10704211	Not Available	761	Open in IMG/M
3300007522\|Ga0105053_10919901	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300007522\|Ga0105053_10994582	Not Available	587	Open in IMG/M
3300007522\|Ga0105053_11047547	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300007522\|Ga0105053_11115551	Not Available	540	Open in IMG/M
3300007522\|Ga0105053_11144983	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300007523\|Ga0105052_10036727	All Organisms → cellular organisms → Bacteria	3572	Open in IMG/M
3300007523\|Ga0105052_10037637	Not Available	3519	Open in IMG/M
3300007523\|Ga0105052_10116208	Not Available	1834	Open in IMG/M
3300007523\|Ga0105052_10228419	Not Available	1250	Open in IMG/M
3300007523\|Ga0105052_10235342	All Organisms → Viruses → Predicted Viral	1228	Open in IMG/M
3300007523\|Ga0105052_10238507	Not Available	1219	Open in IMG/M
3300007523\|Ga0105052_10427568	Not Available	865	Open in IMG/M
3300007523\|Ga0105052_10788200	Not Available	599	Open in IMG/M
3300007523\|Ga0105052_10930295	Not Available	542	Open in IMG/M
3300007523\|Ga0105052_11012858	Not Available	516	Open in IMG/M
3300007722\|Ga0105051_10470973	Not Available	932	Open in IMG/M
3300007722\|Ga0105051_10924544	Not Available	627	Open in IMG/M
3300007722\|Ga0105051_10941712	Not Available	620	Open in IMG/M
3300007722\|Ga0105051_10959748	Not Available	613	Open in IMG/M
3300007722\|Ga0105051_10965883	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300007722\|Ga0105051_11025744	Not Available	590	Open in IMG/M
3300007722\|Ga0105051_11129121	Not Available	558	Open in IMG/M
3300007722\|Ga0105051_11171591	Not Available	546	Open in IMG/M
3300007722\|Ga0105051_11291319	Not Available	516	Open in IMG/M
3300007722\|Ga0105051_11307120	Not Available	512	Open in IMG/M
3300011188\|Ga0136587_1111273	Not Available	691	Open in IMG/M
3300012037\|Ga0136559_1019119	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300012037\|Ga0136559_1046727	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300012037\|Ga0136559_1053470	Not Available	1046	Open in IMG/M
3300012037\|Ga0136559_1110912	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300012037\|Ga0136559_1181966	Not Available	583	Open in IMG/M
3300012037\|Ga0136559_1219392	Not Available	533	Open in IMG/M
3300012272\|Ga0136586_1066668	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012272\|Ga0136586_1163912	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012272\|Ga0136586_1201696	Not Available	501	Open in IMG/M
3300027832\|Ga0209491_10020993	Not Available	6980	Open in IMG/M
3300027832\|Ga0209491_10047388	Not Available	4324	Open in IMG/M
3300027832\|Ga0209491_10184266	Not Available	1819	Open in IMG/M
3300027832\|Ga0209491_10255578	Not Available	1419	Open in IMG/M
3300027832\|Ga0209491_10291881	Not Available	1274	Open in IMG/M
3300027832\|Ga0209491_10347126	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300027832\|Ga0209491_10391283	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300027832\|Ga0209491_10405609	Not Available	964	Open in IMG/M
3300027832\|Ga0209491_10423355	Not Available	928	Open in IMG/M
3300027832\|Ga0209491_10595373	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027848\|Ga0209390_10112153	All Organisms → Viruses → Predicted Viral	2556	Open in IMG/M
3300027848\|Ga0209390_10156410	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300027848\|Ga0209390_10392665	Not Available	1006	Open in IMG/M
3300027848\|Ga0209390_10417024	Not Available	955	Open in IMG/M
3300027848\|Ga0209390_10419089	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300027848\|Ga0209390_10552853	Not Available	737	Open in IMG/M
3300027976\|Ga0209702_10314751	Not Available	634	Open in IMG/M
3300027983\|Ga0209284_10037684	Not Available	2744	Open in IMG/M
3300027983\|Ga0209284_10091432	Not Available	1623	Open in IMG/M
3300027983\|Ga0209284_10141914	Not Available	1263	Open in IMG/M
3300028373\|Ga0306897_1042027	Not Available	781	Open in IMG/M
3300028373\|Ga0306897_1051605	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300028413\|Ga0306870_1082397	Not Available	580	Open in IMG/M
3300028413\|Ga0306870_1100391	Not Available	524	Open in IMG/M
3300032435\|Ga0335398_10333705	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300032435\|Ga0335398_10374029	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300032435\|Ga0335398_10728610	Not Available	629	Open in IMG/M
3300032462\|Ga0335396_10055604	Not Available	2646	Open in IMG/M
3300032462\|Ga0335396_10136582	All Organisms → Viruses → Predicted Viral	1616	Open in IMG/M
3300032462\|Ga0335396_10382038	Not Available	910	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	87.27%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	12.73%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	87.27%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	12.73%

Habitat	Taxonomy	Distribution
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	87.27%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	12.73%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	87.27%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	12.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300011188	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563	Environmental	Open in IMG/M
3300012037	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300027983	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)	Environmental	Open in IMG/M
3300028373	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563 (v2)	Environmental	Open in IMG/M
3300028413	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496 (v2)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105050_102929671	3300007516	Freshwater	MPISDFCMHFSFLQTQRVINGQRFGRRFPLHPPLYPCWTILVGRISSMKWTGVQQVGLRLGVIVFDSFHIQHFNRI
Ga0105050_105524261	3300007516	Freshwater	PIYFSFLQKQSVINGQQFGRRFPLHLQFYLCWTIFVEQISAVKWTGVQLVALCLGEIVLTAF*
Ga0105050_107377551	3300007516	Freshwater	MHFSFLQKQRVINGQRFGRCFPLHPQFYPCWTILVGRISSVKWTGVHPVAL
Ga0105050_108739831	3300007516	Freshwater	MHFSFWQKQRVIDGQWFGRRFPLHPPFYPCWTIPVERISSVRWTGVQPVALRL
Ga0105055_100039888	3300007519	Freshwater	MHFLFRQKQRVINGQRFGRHFSLHPLFHQCWTILVGRMFSVKWTGVQPVALRLGVIVFAPFQI*
Ga0105055_100120002	3300007519	Freshwater	VTVCLDLKKNYADFCMHFSFRQKQRVVNSQRFGRRFPLHLLFDPRWTILVGRISLVKWTGVQPIALRLGVIVFAPFQI*
Ga0105055_100195011	3300007519	Freshwater	MHFSFRQKQRVINSQRFRRRFPLHPLFRPCWTIRVERISAVKTTFVQPVALRLDVIAFAPFQI*
Ga0105055_100278505	3300007519	Freshwater	MHFSFRQKQRVSNGQRFGRRLPLHLLFYPCWTILVECITSVTVKSLKWTGVQPVALRLGVIAFAPFQI*
Ga0105055_100615921	3300007519	Freshwater	MHFSFRQKQRVINGQRFGRRFLLHPPFYQCWTILVGRIFSVKWAGVQLVALRLGFIAFALFQI*
Ga0105055_100716391	3300007519	Freshwater	MHFSFRQKQRVINGKRFERRFPLHPPFYPCWTILVGRISSVKWTGVQPVALCLGVIVFAPFQ
Ga0105055_100916896	3300007519	Freshwater	MNFSFLQKQRVISSQRFGKRFPLFSPFCSCWNILVGIERISSVKWTGVQPDALHLGVIVFAPFKI*
Ga0105055_101358121	3300007519	Freshwater	MHFSFRQKQRVINGQRFGRRIPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFASFQ
Ga0105055_101524171	3300007519	Freshwater	MHVLFRQKQRVINGQRFGRRFPLHPPFYPCWTILVGRISSVKWTGV
Ga0105055_101613095	3300007519	Freshwater	MHFSFLQKQRVIIGQQFGRRIPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIIFAPFQI*
Ga0105055_102199313	3300007519	Freshwater	MHFSFRQKQRVINSQRFDRRFPLHPPFYPCWAVLVGRISSVKLTGVQPVALRLGVIVFALF*
Ga0105055_102752932	3300007519	Freshwater	MHFSFRQKRRDINGQQFGRRFSLHPLYYPCWTILIGRISLVKWTGVQPVALRVGVIVFAPFQI*
Ga0105055_103125832	3300007519	Freshwater	MHFSFRQKQSDVNGQQFGRRFPLHPPFYPCWTNLAEHISSVKWTDIKPDVLRLGVIAFARFQI*
Ga0105055_103361931	3300007519	Freshwater	MHFSFQQKQRVINGQRFGRRFLLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFAPFQ
Ga0105055_105851512	3300007519	Freshwater	MHFSFWQKQRVINGQQFGRCFPLHPPFYPCWTILVGRISSVKWTGVQPVALQLGVIVFAPFQI*
Ga0105055_109006451	3300007519	Freshwater	MYADFCMHFLFWQKQTVINGQRFGRRFLLHLPFCPCWTILVGRISSVKWTG
Ga0105055_110073391	3300007519	Freshwater	MHFPFRQKQRVINGQRFGRCFPLHPPFYPCWTTLVGRISSVKWTGVQPVALRLGVII
Ga0105055_110431971	3300007519	Freshwater	MYFSFRHWQKQTVINGQRFGRCFPLHSPFYPCWTILVGRISSVKWTGVQPVALRL
Ga0105055_111173571	3300007519	Freshwater	MHFSFRQTQRVINGQGYGRRFPLHLPFYPCWTILVGHISSVKWTGVQ
Ga0105054_101320504	3300007520	Freshwater	MHFSFRQKQRVSNGQRFGRRFPLHLLFYPCWTILVECITSVTVKSLKWTGVQPVALRLGVIAFAPFQI*
Ga0105054_101608813	3300007520	Freshwater	MHFSFRQKQSDVNGQQFGRRFPLHPPFYPGWTNLAEHISSVKWTDIKPDVLRLGVIAFARFQI*
Ga0105054_102782084	3300007520	Freshwater	MYADFCMHFLFWQKQTVINGQRFGRHFLLHPPFCPCCTILVGRISSVKWTGVQPVALRLGVIVFAPFQI*
Ga0105054_103176061	3300007520	Freshwater	MHFSFRQKHRVINGQRFGRRFPLHPSFYLCWTILVGRISSVKWTGVQPVALRLGVIVFAPFQI
Ga0105054_103287151	3300007520	Freshwater	MHFSFQQKQRVINGQRFGRRFLLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFAP
Ga0105054_104310823	3300007520	Freshwater	YADFCMHFSFRQKQRVINGQQFGRRFPLHPPFYPYWTILVGRIFSVKWTGVQPVALRRGVIVFAPFQI*
Ga0105054_104548371	3300007520	Freshwater	MHFSFWQKQRVINGQRFGRRFPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFAP
Ga0105054_105103602	3300007520	Freshwater	LHARLVRQEQRVINGQRFGRHFPLHPPFYPCWTILVGRISSLKWTGVQPVALRLGVVVFALFQI*
Ga0105054_105712593	3300007520	Freshwater	MHFSFRQKQRVINGQQFGRHFPPHPPIYPCWTILVGRISSVKWTGVQPVELRLGVIVFAPLQI*
Ga0105054_106208763	3300007520	Freshwater	VIYGQRFGRCFPLHPPFYPCWTILVGRISSVKWTGAQPVALRFGVIIFAQVQI*
Ga0105054_106677301	3300007520	Freshwater	MHFSFQQKQRVINGQRFGRRFPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFA
Ga0105054_107359392	3300007520	Freshwater	MHFSFQQKQRVINGQRFGRRFPLNPLFHLYWTIRVGYISLVKWTGAQSVALRLVVIVFAAFQI*
Ga0105054_109095852	3300007520	Freshwater	MHFSFQQKQRVINGQRFGRCFSLHPPFHPCWTILVGRISSVKWTGVQLVALRLGVIVFAPFKI*
Ga0105054_111964791	3300007520	Freshwater	QKQRVINSQRFGRCFPLHPPFYPCWTILVGRISSVKWTGVLPVALRLGVIVFAPFQI*
Ga0105053_100241216	3300007522	Freshwater	MHFSFRQKQRIINGQWFTTRFPLHPPFDSCWTIPVERISSGKWTGVQPVALRLGVIAFAPFKI*
Ga0105053_101245184	3300007522	Freshwater	MHFSFWQKQRVINGQWFGRRFPLHPLFYPCWTILVGRISSVKWTGVQLVALHLGVIVFAPSQI*
Ga0105053_101791033	3300007522	Freshwater	MYFSFWQKRRDITGQRFGRRFPLHPLFHPCWTILVGRISSVKWTDVQLVALRLGVIAFAPFQI*
Ga0105053_103608353	3300007522	Freshwater	MHFSFRQKHWVINGQRFGRHFSLHPLFHPCWTILVGRISSVKWTGVQPAALHLGVIVFAPFQI*
Ga0105053_103907461	3300007522	Freshwater	MYADFCMHFLFWQKQTVINGQRFGRHFLLHPPFCPCCTILVGRISSVKWTGVQPVALRLGVIVFA
Ga0105053_104671922	3300007522	Freshwater	MHFSFWQKQRVINGQRFGRRFPLHPPIYPCWTILVGRIASVKWTGVQPVALRLDVIVFASFQI*
Ga0105053_106568001	3300007522	Freshwater	MHFSFQQKQRVINGQQFGRCFPLHPPFSPCWTILVGRISSVKWTGVQLVALRLGVIVFAPFQI
Ga0105053_107042111	3300007522	Freshwater	MHFSFQQKQRVINGQRFGRRFPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGFIVFV
Ga0105053_109199011	3300007522	Freshwater	MYFSFRHWQKQTVINGQRFGRCFPLHSPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFAPFQI*
Ga0105053_109945821	3300007522	Freshwater	MHFSFRQKQRVLNGQRFGRRFPLHPPFYPCWTILVGRISSVKWTGVQLVALRLG
Ga0105053_110475471	3300007522	Freshwater	MHLSFRQKQRDINGQRFGGRFPLHPPFNPCWTILVGRISSVKWTGVQSVALRLGV
Ga0105053_111155511	3300007522	Freshwater	KPIYADFCMHFSFRQKQRVINGQQFGRCFPLHPPFYSRWTILVGRISSVKRTGIQLVALRLGVIVFALFQI*
Ga0105053_111449831	3300007522	Freshwater	MHLSFWQKQRVINGQRFGRRFPLHPQFYPCWTILVGRISSVKWTGV
Ga0105052_100367274	3300007523	Freshwater	MHFSFWQKQRVLNGQWFERRCPLHPPFYPSWTILVGRISSVKLTGVQPVALRLGVIVFALFQI*
Ga0105052_100376372	3300007523	Freshwater	MHFSFQQKQRVINGQRFGRRFPLNPLFHPYWTIRVGYISLVKWTGAQSVALRLVVIVFAAFQI*
Ga0105052_101162082	3300007523	Freshwater	MHFSFRQKQRVINGQQFGRRFQMHPPFYPCWTIFVGRISSVKWTGAQPVALRFGVIIFAQVQI*
Ga0105052_102284191	3300007523	Freshwater	MRFSFWQKHGVINSQWFGRRCPLQPPIYPCWTILVESISSVKWTGVQPVALRLGVIVFAPFQI*
Ga0105052_102353421	3300007523	Freshwater	KQRVINSQRFGRCFPLHPPFYPCWTILVGRISSVKWTGVQPIALRLGVIVFAPFQI*
Ga0105052_102385071	3300007523	Freshwater	KTIYADFCMHFSFRQKQRVINGQRFGRCFPLHPPFYLCWTILVGRISSVKWTGIQPVALRLGVIVFARFS*
Ga0105052_104275682	3300007523	Freshwater	MHFSFWQKQKVINGQGFGRRFLLHPLFYPCWTILVGRISWVKWTGVQVVALRLGIIVFAPFQI*
Ga0105052_107882001	3300007523	Freshwater	SFRQKQRVINGQRFGRCFQLHPPFYPCWTILVGRISSVKWIGVQLVALRLGVIVFAPFQI
Ga0105052_109302952	3300007523	Freshwater	FWQKQRVINGQRFGRCFPLHPPFYPCWTILVGRISLVKWTGVQPVALRLGVIVFAPFQI*
Ga0105052_110128582	3300007523	Freshwater	SFRQKQRVINGQRFGRCFPLHPPFYPCWTILVGRISSVKLTGVQPVALRLGVIVFAPFQI
Ga0105051_104709731	3300007722	Freshwater	MHFSFWQKQKVINGQGFGRRFLLHLLFYPCWTILVGRISWVKWTGVQVVALRLGIIVFAPFQI*
Ga0105051_109245441	3300007722	Freshwater	MPISFRQKQRVINGQRFGRRFPLHPPFYPRWTILVGRISSV
Ga0105051_109417122	3300007722	Freshwater	MHFSFWQKQRVINGLRFGRYFPLHPPFYPCWTILVGRISSVMWTGVQPVALRLGVIVFAPFQI*
Ga0105051_109597481	3300007722	Freshwater	MHFSFWQKQKVINSQGFGRRFLLHPLFYPCWTILVGRISWVKWTGVQVVALRLGIIVFAPFQI*
Ga0105051_109658831	3300007722	Freshwater	MHFSFWQNQRVINGQRFGKCFPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVF
Ga0105051_110257441	3300007722	Freshwater	VIKSQRFGRRFPLHPLFYPCWMILFEHISSVKWTAVRPVELHFGVIAFAPFQI*
Ga0105051_111291211	3300007722	Freshwater	MNFLFWQKQRVVNGKRFGKCFPLHPPFYLCWTILVGRISSVKWTGVQPVALRLGVIVFAPLQI*
Ga0105051_111715911	3300007722	Freshwater	KQRVSNGQRFGRRLPLRLLFYPCWTILVECITSVTVKSLKWTGVQPVALRLGVIAFAPFQI*
Ga0105051_112913191	3300007722	Freshwater	LISKPIYADFCLYFSFWHKQRVINGQRLGRRFPLHPPFHPCWTILVGRISSVKWTGVQPVALRLGVIVFALF
Ga0105051_113071202	3300007722	Freshwater	MHFSFWQKQRVINGQRFGRCFLLHPPFYPCWTILVGRISSVKWTGVQPVALRLDVIVF
Ga0136587_11112732	3300011188	Saline Lake	MPISAFRQKQRVINSQQFGRRFPLHPPFYLCWAIFVEHISSVRWTGVQPVALRLGVIVFAPFQI*
Ga0136559_10191193	3300012037	Saline Lake	MHFLFHQKQRVINSQRFGSSFPLHPLFYLCWTIFVERISSVKWTGVQPVALHFGVIIFASFQI*
Ga0136559_10467271	3300012037	Saline Lake	MHFSFRQKHRVINGQRFGRRFPLHPSFYLCWTILVGRISSVKWTGVQPVALRLGVI
Ga0136559_10534702	3300012037	Saline Lake	MHFSFRQKRRDINGQQFGRRFSLHPLYYPCWTILIGRISLVKWTGVQPVALRVGVIVFAQFQI*
Ga0136559_11109122	3300012037	Saline Lake	MHFSFRQKQRVINGQRFGRCFPLHPPFNPCWTILVGRISSVKWTGVQPVALRLGVIVFASLQI*
Ga0136559_11819661	3300012037	Saline Lake	MHFSFQQKQRVINGQRFGRPFPLHPPFYPCWTILVGRISSVKWTGVQPVAL
Ga0136559_12193921	3300012037	Saline Lake	MHFSFQLKQRVINGQRFGWRFPLHPPFYPCWTILVERITSVKWIGVRPVAQ
Ga0136586_10666681	3300012272	Saline Lake	MHFSFQQKQRVINNQRFGRRFPLHPPFYLCWTIFVARISSVMWTGVQSVALRLGVIVFAPFQ
Ga0136586_11639121	3300012272	Saline Lake	MHFSFWQKQRVINGQRFGRCFTLHPPFYPCWTILVGRISSVKWTGVQLVALRLGV
Ga0136586_12016961	3300012272	Saline Lake	MHFSFQQKQRVIYDQRFGSLFPLFLLFHPCWTILVGHISLVKWTGVQPVALRLGVISLLDSKFS
Ga0209491_100209934	3300027832	Freshwater	VTVCLDLKKNYADFCMHFSFRQKQRVVNSQRFGRRFPLHLLFDPRWTILVGRISLVKWTGVQPIALRLGVIVFAPFQI
Ga0209491_100473883	3300027832	Freshwater	MHFSFRQKHWVINGQRFGRHFSLHPLFHPCWTILVGRISSVKWTGVQPAALHLGVIVFAPFQI
Ga0209491_101842665	3300027832	Freshwater	MHFSFLQKQRVIIGQQFGRRIPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIIFAPFQI
Ga0209491_102555781	3300027832	Freshwater	MHFSFRQKQRVINGQRFGRRIPLHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFAS
Ga0209491_102918811	3300027832	Freshwater	QRVINSQRFDRRFPLHPPFYPCWAVLVGRISSVKLTGVQPVALRLGVIVFALF
Ga0209491_103471261	3300027832	Freshwater	MHLSFRQKQRDINGQRFGGRFPLHPPFYPCWTILVGRISSVKWTGVQSVALRLGVIVF
Ga0209491_103912831	3300027832	Freshwater	MYADFCMHFLFWQKQTVINGQRFGRRFLLHLPFCPCWTILVGRISSVKWTGVQPVALR
Ga0209491_104056093	3300027832	Freshwater	MHFSFQQKQRVINGQRFGRCFSLHPPFHPCWTILVGRISSVKWTGVQLVALRLGVIVFAPFKI
Ga0209491_104233552	3300027832	Freshwater	MHFSFRQKQSDVNGQQFGRRFPLHPPFYPCWTNLAEHISSVKWTDIKPDVLRLGVIAFARFQI
Ga0209491_105953731	3300027832	Freshwater	MHFSFRQKQKVINGQRFGRRFPLHPPFYPCWTILVGRISSVKWTG
Ga0209390_101121534	3300027848	Freshwater	MHFSFWQKQRVINGQWFGRRFPLHPLFYPCWTILVGRISSVKWTGVQLVALHLGVIVFAPSQI
Ga0209390_101564104	3300027848	Freshwater	MYADFCMHFLFWQKQTVINGQRFGRHFLLHPPFCPCCTILVGRISSVKWTGVQPVALRLRVIVFAQFQI
Ga0209390_103926652	3300027848	Freshwater	MHFSFQQKRRVVNGQLFGRRFLLHPLFLTCWTILVGRISPVKWTGVQPVALHLGVIVFAPSQI
Ga0209390_104170242	3300027848	Freshwater	MHFSFWQKQRVINGQRFGRRFPLHPPIYPCWTILVGRIASVKWTGVQPVALRLDVIVFASFQI
Ga0209390_104190892	3300027848	Freshwater	MHFSFWQKQRVINGQQFGRCFPLHPPFYPCWTILVGRISSVKWTGVQPVALQLGVIVFAPFQI
Ga0209390_105528531	3300027848	Freshwater	MHFSFRQKQRVINCQRFGRRFPLHPPFYLCWTILVGRISSVKWTGVQPVALRLGVIIFLIHLLS
Ga0209702_103147512	3300027976	Freshwater	MHFSFWQKQRVINGQRFGRRFPLHLPFYPCWTILVGRISSVKWTDVQPVALRL
Ga0209284_100376843	3300027983	Freshwater	MHFSFRQKQRVINVQRFERRFSQHPPFYPCWTILVGRISSVKWTGVQPVALRLGVIVFALFQI
Ga0209284_100914323	3300027983	Freshwater	CMHFSFWQKQRVLNGQWFERRCPLHPPFYPSWTILVGRISSVKLTGVQPVALRLGVIVFALFQI
Ga0209284_101419141	3300027983	Freshwater	MRFSFWQKHGVINSQWFGRRCPLQPPIYPCWTILVESISSVKWTGVQPVALRLGVIVFAPFQI
Ga0306897_10420271	3300028373	Saline Lake	MHSSFWQKQGVINCQRFGRCFPLHPPFYPCWTILVGRISSMKWTGVQLFALRLGVIVFASFQI
Ga0306897_10516051	3300028373	Saline Lake	MPISAFRQKQRVINSQQFGRRFPLHPPFYLCWAIFVEHISSVRWTGVQPVALRL
Ga0306870_10823972	3300028413	Saline Lake	CMHFSFRQKRRDINGQQFGRRFSLHPLYYPCWTILIGRISLVKWTGVQPVALRVGVIVFAQFQI
Ga0306870_11003912	3300028413	Saline Lake	RQKQRIINDQQFGRRFPLHLPFYPCWTILVGRISSVKWTGVRPVALRLGVIVFALFQI
Ga0335398_103337052	3300032435	Freshwater	MQFSFRQKQGVINGQRFGRCFPLHPPFYPCWTILVGRISSVKWTGVQLVALRLGVIVFAQFQI
Ga0335398_103740294	3300032435	Freshwater	MYADFCMHFLFWQKQTVINGQRFGRHFLLHPPFCPCCTILVGRISSVKWTGVQPVALRLGVIVFAPFQI
Ga0335398_107286102	3300032435	Freshwater	YTDFCMHFSFRQKQRVISGQRFGRRFPLHPPFYPCWTIPVECISSVKWTGVQPVALRLGVFTFTPFEI
Ga0335396_100556042	3300032462	Freshwater	MHFSFQQKQRVINGQRFGRRFPLNPLFHPYWTIRVGHISLVKWTGAQSVALRLVVIVFAAFQI
Ga0335396_101365823	3300032462	Freshwater	MHFSFRQKQRVINSQRFGRHFPQHPPFYPRWTILVGRISSVKWTGVQPVALRLGVIVFAPFQI
Ga0335396_103820382	3300032462	Freshwater	QKQRVINGQRFGRCFPLHPPFYPCWTILVGRISSVKWTGVQLIALRVGVLVFAHFQM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086657

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences