Metagenome / Metatranscriptome Family F086543

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086543
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	100 residues
Representative Sequence	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Number of Associated Samples	93
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.73 %
% of genes near scaffold ends (potentially truncated)	40.91 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (47.273 % of family members)
Environment Ontology (ENVO)	Unclassified (35.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.36% β-sheet: 0.00% Coil/Unstructured: 35.64%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF16640	Big_3_5	12.73
PF02567	PhzC-PhzF	5.45
PF13517	FG-GAP_3	1.82
PF01872	RibD_C	1.82
PF01593	Amino_oxidase	0.91
PF01152	Bac_globin	0.91
PF00731	AIRC	0.91
PF03591	AzlC	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	5.45
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.82
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.82
COG1296	Predicted branched-chain amino acid permease (azaleucine resistance)	Amino acid transport and metabolism [E]	0.91
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.45 %
Unclassified	root	N/A	14.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.55 %
Unclassified	root	N/A	14.55 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.55 %
Unclassified	root	N/A	14.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.91 %
Unclassified	root	N/A	14.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.00 %
Unclassified	root	N/A	14.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	78.18 %
Unclassified	root	N/A	14.55 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	78.18 %
Unclassified	root	N/A	14.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	78.18 %
Unclassified	root	N/A	14.55 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	78.18 %
Unclassified	root	N/A	14.55 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	78.18 %
Unclassified	root	N/A	14.55 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2438257	All Organisms → cellular organisms → Bacteria → Proteobacteria	4823	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104949125	Not Available	524	Open in IMG/M
3300000953\|JGI11615J12901_12157408	Not Available	569	Open in IMG/M
3300004114\|Ga0062593_103568949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300004156\|Ga0062589_100945161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300004157\|Ga0062590_100215804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1405	Open in IMG/M
3300004463\|Ga0063356_100615568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1472	Open in IMG/M
3300005093\|Ga0062594_100981069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300005103\|Ga0066813_1000438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300005187\|Ga0066675_10639874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300005338\|Ga0068868_102108816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300005340\|Ga0070689_100764044	Not Available	848	Open in IMG/M
3300005444\|Ga0070694_101406051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300005445\|Ga0070708_102120931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300005552\|Ga0066701_10404893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300005555\|Ga0066692_10297013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300005718\|Ga0068866_10019761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3073	Open in IMG/M
3300006034\|Ga0066656_10323528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300006046\|Ga0066652_100006059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7215	Open in IMG/M
3300009012\|Ga0066710_100300396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2352	Open in IMG/M
3300009012\|Ga0066710_104901309	Not Available	501	Open in IMG/M
3300009090\|Ga0099827_11369575	Not Available	616	Open in IMG/M
3300010375\|Ga0105239_10682264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1174	Open in IMG/M
3300011003\|Ga0138514_100116550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300012198\|Ga0137364_10006161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6513	Open in IMG/M
3300012198\|Ga0137364_10437147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300012200\|Ga0137382_10070462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2239	Open in IMG/M
3300012200\|Ga0137382_10857148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300012200\|Ga0137382_10878139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300012207\|Ga0137381_10237371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1583	Open in IMG/M
3300012208\|Ga0137376_10182097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1814	Open in IMG/M
3300012211\|Ga0137377_10028115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5065	Open in IMG/M
3300012285\|Ga0137370_10420271	Not Available	811	Open in IMG/M
3300012349\|Ga0137387_10204526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1418	Open in IMG/M
3300012356\|Ga0137371_10052673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3147	Open in IMG/M
3300012359\|Ga0137385_10963400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300012955\|Ga0164298_10170992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1242	Open in IMG/M
3300012957\|Ga0164303_10783354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300012958\|Ga0164299_10038716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2140	Open in IMG/M
3300012961\|Ga0164302_10017057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3044	Open in IMG/M
3300012984\|Ga0164309_10324041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1120	Open in IMG/M
3300012984\|Ga0164309_11611142	Not Available	556	Open in IMG/M
3300012987\|Ga0164307_10800644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300015077\|Ga0173483_10403801	Not Available	702	Open in IMG/M
3300015359\|Ga0134085_10581995	Not Available	519	Open in IMG/M
3300018027\|Ga0184605_10109055	All Organisms → Viruses → Predicted Viral	1226	Open in IMG/M
3300018028\|Ga0184608_10016693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2603	Open in IMG/M
3300018054\|Ga0184621_10006089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3319	Open in IMG/M
3300018061\|Ga0184619_10270646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300018073\|Ga0184624_10214094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300018076\|Ga0184609_10033246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2131	Open in IMG/M
3300018081\|Ga0184625_10487458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300018468\|Ga0066662_10193506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1599	Open in IMG/M
3300018482\|Ga0066669_10052606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2584	Open in IMG/M
3300019356\|Ga0173481_10591391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300019869\|Ga0193705_1007121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2441	Open in IMG/M
3300019873\|Ga0193700_1022838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300019875\|Ga0193701_1071276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300019876\|Ga0193703_1030515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300019883\|Ga0193725_1091581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300020018\|Ga0193721_1051172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300021080\|Ga0210382_10021043	All Organisms → cellular organisms → Bacteria	2357	Open in IMG/M
3300021415\|Ga0193694_1059640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300021510\|Ga0222621_1007165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2023	Open in IMG/M
3300022694\|Ga0222623_10210116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300022756\|Ga0222622_10161340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1455	Open in IMG/M
3300022756\|Ga0222622_10976330	Not Available	622	Open in IMG/M
3300025931\|Ga0207644_10306609	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300025938\|Ga0207704_10542107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300026310\|Ga0209239_1073594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1488	Open in IMG/M
3300027461\|Ga0207601_102268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1100	Open in IMG/M
3300027748\|Ga0209689_1077076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1775	Open in IMG/M
3300028710\|Ga0307322_10087450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300028713\|Ga0307303_10051501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300028715\|Ga0307313_10137516	Not Available	751	Open in IMG/M
3300028720\|Ga0307317_10105670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300028768\|Ga0307280_10107028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300028778\|Ga0307288_10039046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1601	Open in IMG/M
3300028782\|Ga0307306_10152353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300028782\|Ga0307306_10177243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300028787\|Ga0307323_10088101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300028791\|Ga0307290_10093045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300028791\|Ga0307290_10223234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300028791\|Ga0307290_10344459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300028799\|Ga0307284_10224804	Not Available	742	Open in IMG/M
3300028799\|Ga0307284_10415715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300028807\|Ga0307305_10061017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1737	Open in IMG/M
3300028819\|Ga0307296_10034165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2682	Open in IMG/M
3300028819\|Ga0307296_10226310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1016	Open in IMG/M
3300028828\|Ga0307312_10144456	Not Available	1505	Open in IMG/M
3300028828\|Ga0307312_10167327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1401	Open in IMG/M
3300028828\|Ga0307312_10174640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1372	Open in IMG/M
3300028828\|Ga0307312_10246811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1154	Open in IMG/M
3300028878\|Ga0307278_10053331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1830	Open in IMG/M
3300028884\|Ga0307308_10020099	Not Available	3065	Open in IMG/M
3300030336\|Ga0247826_11149347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300030904\|Ga0308198_1019231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300030905\|Ga0308200_1184096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300030987\|Ga0308155_1013707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300030989\|Ga0308196_1070620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300031152\|Ga0307501_10032023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300031226\|Ga0307497_10265126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300031421\|Ga0308194_10186780	Not Available	663	Open in IMG/M
3300033551\|Ga0247830_10855131	All Organisms → cellular organisms → Bacteria → Terrabacteria group	724	Open in IMG/M
3300034644\|Ga0370548_074750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300034644\|Ga0370548_138197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300034680\|Ga0370541_046777	Not Available	559	Open in IMG/M
3300034681\|Ga0370546_012196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300034681\|Ga0370546_042627	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300034681\|Ga0370546_084505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.55%
Host-Associated	Host-Associated	5.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.64%
Aquatic	Environmental → Aquatic	10.91%
Plants	Host-Associated → Plants	5.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.73%
Sediment	Environmental → Aquatic → Sediment	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.64%
Loam	Environmental → Terrestrial → Soil → Loam	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	60.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	47.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.18%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027461	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-E (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_24382576	3300000033	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIRAIIQLGRALDRRIAVKP*
INPhiseqgaiiFebDRAFT_1049491251	3300000364	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDAMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIRAIIQLGRALDRRIAVK
JGI11615J12901_121574081	3300000953	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGAKPSFPDGIGAIIQLGRALDRRIALKP*
Ga0062593_1035689492	3300004114	Soil	HVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIGAIIELGRALDRRIQLKP*
Ga0062589_1009451612	3300004156	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIGAIIELGRALDRRIQLKP*
Ga0062590_1002158042	3300004157	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0063356_1006155682	3300004463	Arabidopsis Thaliana Rhizosphere	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTTPSYPDGIGAIIQLGRALDRRIALKP*
Ga0062594_1009810692	3300005093	Soil	VTNVVDIRGDGGQRNAGPAEREKLACLFEAIGNATNATLREMPDFSDEMIRRQMTICFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0066813_10004381	3300005103	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0066675_106398742	3300005187	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNSTLREMPDFSDEIIRRQMMLCFASVGGFVMYADILRQGVKPSYPDGIQAIIKLGRALDRQIAVKP*
Ga0068868_1021088161	3300005338	Miscanthus Rhizosphere	PAEREKLACLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0070689_1007640442	3300005340	Switchgrass Rhizosphere	VTNVVDIHGEGRQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0070694_1014060511	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	PAAIRSEAHVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTICFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0070708_1021209311	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EREKLARLFEAIGNATNATLREMPDFSDESIRRQMTVCFASVGGFVLYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0066701_104048932	3300005552	Soil	VTNVVDIHGDGGQRNAGPVEREKLACLFEAIGNATNATLREMPDFSDETIRRQMTVCFASVGGFVLYADVLRQGTKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0066692_102970132	3300005555	Soil	VTNVVDIRSDGGHRNAGPAEREKLACLFEAIGNATNATLREMPDFSDDTIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0068866_100197611	3300005718	Miscanthus Rhizosphere	RRHPWDGGQRDAGPVDREKLAGLFSDGMIRRQMTLCFAGVGGFVMYADILRQGTKPSYPEGIGAIIQLGRALDRRIALKP*
Ga0066656_103235281	3300006034	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNSTLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGVKPSYPEGIQAIIKLGRALDRQIAVKP*
Ga0066652_1000060592	3300006046	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPEFSDEVIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0066710_1003003964	3300009012	Grasslands Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNSTLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGVKPSYPDGIQAIIKLGRALDRQIAVKP
Ga0066710_1049013092	3300009012	Grasslands Soil	VTNVVDIRSDGGHRNAGPAEREKLACLFEAIGNATNATLREMPDFSDDTIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRITLK
Ga0099827_113695751	3300009090	Vadose Zone Soil	LEADVTNVVDIRSDGGHRNAGPAEREKLACLFEAIGNATNATLREMPDFSDETIRRQMTVCFASVGGFVLYADILRQGTKPSYPDGIGAIIQLGRALERRIALKA*
Ga0105239_106822642	3300010375	Corn Rhizosphere	VTNVVDIRGDGGQRNAGPAEREKLACLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0138514_1001165501	3300011003	Soil	LEAHVTNVVDIQGDGGQRNARPAEREKLACLFEAIGNATNATLREMPDFSDETIRRQMTVCFASVGGFVLYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKA*
Ga0137364_100061617	3300012198	Vadose Zone Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNSTLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGVKPSYPDGIQAIIKLGRALDRQIAVKP*
Ga0137364_104371471	3300012198	Vadose Zone Soil	LEAHVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALERRIALKA*
Ga0137382_100704622	3300012200	Vadose Zone Soil	LEAHVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKP*
Ga0137382_108571482	3300012200	Vadose Zone Soil	PAWPAAIRSEAHVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNSTLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGVKPSYPEGIQAIIKLGRALDRQIAVKP*
Ga0137382_108781391	3300012200	Vadose Zone Soil	IHGDGGQRNAGPAEREKLARLFEAIGNATNATLREMPDFSDETIRRQMTVCFASVGGFVLYADILRQGTKPSYPDGIGAIIQLGRALERRIALKS*
Ga0137381_102373712	3300012207	Vadose Zone Soil	VNNVVDIHGDGGHRSAGPAEREKLALLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0137376_101820971	3300012208	Vadose Zone Soil	LEAHVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNSTLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGVKPSYPEGIQAIIKLGRALDRQIAVKP*
Ga0137377_100281152	3300012211	Vadose Zone Soil	LEVHVSNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTVCFASVGGFVLYADILRQGTKPSYPDGIGAIIQLGRALERRIALKP*
Ga0137370_104202712	3300012285	Vadose Zone Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFDAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRITLKP*
Ga0137387_102045262	3300012349	Vadose Zone Soil	LEAHVNNVVDIHGDGGHRSAGPAEREKLACLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0137371_100526732	3300012356	Vadose Zone Soil	LEAHVTNVVDIRSDGGHRNAGPAEREKLACLFEAIGNATNATLREMPDFSDDTIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0137385_109634002	3300012359	Vadose Zone Soil	GPAEREKLASLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVVYADILRQGIKPSYPDGIGAIIQLGRALDRRIALKS*
Ga0164298_101709922	3300012955	Soil	LEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKA*
Ga0164303_107833541	3300012957	Soil	LEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0164299_100387163	3300012958	Soil	LEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP*
Ga0164302_100170574	3300012961	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKA*
Ga0164309_103240414	3300012984	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGA
Ga0164309_116111421	3300012984	Soil	LEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGA
Ga0164307_108006442	3300012987	Soil	LEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKA*
Ga0173483_104038011	3300015077	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIELGRALDRRIQLKP*
Ga0134085_105819952	3300015359	Grasslands Soil	VTNVDEILSDGSPRKAGPAEREELAGLFEAIGNATNSTLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGVKPSYPDGIQAIIKLGRALD
Ga0184605_101090552	3300018027	Groundwater Sediment	VTNVVEIRRDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALERRIALKP
Ga0184608_100166932	3300018028	Groundwater Sediment	VTNVVDIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0184621_100060892	3300018054	Groundwater Sediment	VTNVVEIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0184619_102706461	3300018061	Groundwater Sediment	VTNVVDIHGDGGQRNAGPAEREKLAGIFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKP
Ga0184624_102140942	3300018073	Groundwater Sediment	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0184609_100332462	3300018076	Groundwater Sediment	VNNVVDIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS
Ga0184625_104874581	3300018081	Groundwater Sediment	PVHAWPAAIRLEAHVTNVVDIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0066662_101935064	3300018468	Grasslands Soil	VTNVVDIHGDGGQRNAGPAEREKLACLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRIALKS
Ga0066669_100526065	3300018482	Grasslands Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNSTLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGVKPSYTEAIQAIIKLGRALDLQIAVNP
Ga0173481_105913912	3300019356	Soil	GDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIGAIIELGRALDRRIQLKP
Ga0193705_10071212	3300019869	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0193700_10228382	3300019873	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0193701_10712761	3300019875	Soil	GGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS
Ga0193703_10305152	3300019876	Soil	RLEAHVTNVVEIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0193725_10915812	3300019883	Soil	DGGQRSAGPIEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKP
Ga0193721_10511722	3300020018	Soil	RNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0210382_100210434	3300021080	Groundwater Sediment	VTNVVDIHGDGGQRNAGPAEREKLAGIFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0193694_10596401	3300021415	Soil	EKLAGIFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKP
Ga0222621_10071652	3300021510	Groundwater Sediment	VNNVVDIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0222623_102101161	3300022694	Groundwater Sediment	RPAPTPVHAWPAAIRLEAHVTNVVEIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0222622_101613402	3300022756	Groundwater Sediment	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS
Ga0222622_109763302	3300022756	Groundwater Sediment	PAERQKLAGLFDAIGNATNAALREMPDVSDETIRRQMTICFASVGGFVMYADMLRQGTKESYPDGIAAIIQLGRALDRRIEVKPA
Ga0207644_103066091	3300025931	Switchgrass Rhizosphere	VTNVVDIRGDGGQRNAGPAEREKLACLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIG
Ga0207704_105421072	3300025938	Miscanthus Rhizosphere	RNAGPAEREKLACLFEAIGNATNATLREMPDFSDEMIRRQMTLCFAGVGGFVMYADILRQGTKPSYPEGIGAIIQLGRALDRRIALKP
Ga0209239_10735942	3300026310	Grasslands Soil	VTNVVDIRSDGGHRNAGPAEREKLACLFEAIGNATNATLREMPDFSDDTIRRQMTLCFASVGGFVMYADILRQGIKPSYPDGIGAIIQLGRALDRRITLKS
Ga0207601_1022682	3300027461	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTTPSYPDGIGAIIQLGRALDRRIALKP
Ga0209689_10770761	3300027748	Soil	IRLEAHVTNVVDIHGDGGQRNAGPVEREKLACLFEAIGNATNATLREMPDFSDETIRRQMTVCFASVGGFVLYADVLRQGTKPSYPDGIGAIIQLGRALDRRIALKS
Ga0307322_100874502	3300028710	Soil	LEAHVTNVVEIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307303_100515011	3300028713	Soil	AGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS
Ga0307313_101375161	3300028715	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRA
Ga0307317_101056702	3300028720	Soil	TNVVEIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307280_101070282	3300028768	Soil	DLPTPVHAWPAAIRLEAHVTNVVEIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307288_100390465	3300028778	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGI
Ga0307306_101523531	3300028782	Soil	REKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307306_101772432	3300028782	Soil	EKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALERRIALKP
Ga0307323_100881012	3300028787	Soil	VTNVVDIHGDGGQRNAGPVEREKLADLFEAIGNATNATLREMPEFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307290_100930452	3300028791	Soil	LARPAPTPVHAWPAAIRLEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKS
Ga0307290_102232342	3300028791	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILREGTKPSYPDGIGAIIQLGRALDRRITLKP
Ga0307290_103444591	3300028791	Soil	EREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKA
Ga0307284_102248042	3300028799	Soil	VTNVIEIHNAAAPLRAGPAERQKLAGLFDAIGNATNATLREMPDVSDETIRRQMTICFASVGGFVMYADMLRQGTKESYPDGIAAIIQLGRALDRRIEVKPA
Ga0307284_104157151	3300028799	Soil	SALARPAPTLVHAWPAAIRSEAHVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKPSYPDGIGAIIELGRALDRRIQLKP
Ga0307305_100610172	3300028807	Soil	TPVHAWPAAIRLEAHVNNVVDIRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307296_100341658	3300028819	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALERRIALKP
Ga0307296_102263103	3300028819	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKA
Ga0307312_101444562	3300028828	Soil	VTNVIEIHNAAAPLRAGPAERQKLAGLFDAIGNATNAALREMPDVSDETIRRQMTICFASVGGFVMYADMLRQGTKESYPDGIAAIIQLGRALDRRIEVKPA
Ga0307312_101673272	3300028828	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKP
Ga0307312_101746402	3300028828	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPEFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307312_102468112	3300028828	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKT
Ga0307278_100533312	3300028878	Soil	VTNVVDIQGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTVCFASVGGFVMYADILRQGTKASYPDGIGAIIQLGRALDRRIALKP
Ga0307308_100200998	3300028884	Soil	CSPLRAGPAERQKLAGLFDAIGNATNATLREMPDVSDETIRRQMTICFASVGGFVMYADMLRQGTKESYPDGIAAIIQLGRALDRRIEVKPA
Ga0247826_111493472	3300030336	Soil	EREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0308198_10192311	3300030904	Soil	ALARPAPTPEHAWPAAIRLEAHVTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0308200_11840961	3300030905	Soil	ALARPAPTPVHAWPAAIRLEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALERRIALKP
Ga0308155_10137071	3300030987	Soil	GQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0308196_10706202	3300030989	Soil	IRSDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0307501_100320232	3300031152	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKP
Ga0307497_102651263	3300031226	Soil	VTNVIDIHGATASPRAGPAERQKLAGLFDAIGNATNATLREMPDVSDETIRRQMTICFASVGGFVMYSDMLRQGTKESYPDGIAAVIQLGRALDRQIEVKPS
Ga0308194_101867801	3300031421	Soil	VTNVIEIHNAAAPLRAGPAERQKLAGLFDAIGNATNATLREMPDVSDETIRRQMTICFASVGGFVMYADMLRHGTRESYPDGVAAIIQLGRALDRRIEVKAS
Ga0247830_108551311	3300033551	Soil	VTNVVDIHGDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEIIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0370548_074750_7_312	3300034644	Soil	VTNVVEIRRDGGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0370548_138197_130_447	3300034644	Soil	LEAHVTNVVDIRGDGGQRNAGPAEREKLAGIFEAIGNATNATLREMPEFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRITLKP
Ga0370541_046777_285_557	3300034680	Soil	VTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGR
Ga0370546_012196_658_975	3300034681	Soil	LEAHVNNVVDIHGDAGQRNAGPAEREKLAGLFEAIGNATNATLREMPDFSDEMIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALDRRIALKP
Ga0370546_042627_58_366	3300034681	Soil	VNNVIDVQGVGGPRNAGPVERAKLAELFEAIGNATNATIKEMPGFSNETVRRQMTRAFASVGGFVMYADMLRQGTKETYPDGIAAVIQLGRALSRRIEVRSA
Ga0370546_084505_82_399	3300034681	Soil	LEAHVTNVVDIHGDGGQRNAGPVEREKLAGLFEAIGNATNATLREMPDFSDETIRRQMTLCFASVGGFVMYADILRQGTKPSYPDGIGAIIQLGRALERRIALKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086543

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences