Metagenome / Metatranscriptome Family F086538

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086538
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	58 residues
Representative Sequence	QTEAIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDELQVQDDVTANP
Number of Associated Samples	99
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.73 %
% of genes near scaffold ends (potentially truncated)	93.64 %
% of genes from short scaffolds (< 2000 bps)	95.45 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (16.364 % of family members)
Environment Ontology (ENVO)	Unclassified (51.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.83% β-sheet: 0.00% Coil/Unstructured: 73.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF11304	DUF3106	58.18
PF00557	Peptidase_M24	1.82
PF00294	PfkB	0.91
PF00762	Ferrochelatase	0.91
PF03544	TonB_C	0.91
PF01546	Peptidase_M20	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0276	Protoheme ferro-lyase (ferrochelatase)	Coenzyme transport and metabolism [H]	0.91
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.27 %
Unclassified	root	N/A	2.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.27 %
Unclassified	root	N/A	2.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.27 %
Unclassified	root	N/A	2.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.00 %
Unclassified	root	N/A	2.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.09 %
Unclassified	root	N/A	2.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.09 %
Unclassified	root	N/A	2.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.09 %
Unclassified	root	N/A	2.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.73 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001100\|JGI12703J13194_107989	Not Available	536	Open in IMG/M
3300001356\|JGI12269J14319_10343304	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300002245\|JGIcombinedJ26739_100900788	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300003351\|JGI26346J50198_1003708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300004080\|Ga0062385_10150687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1201	Open in IMG/M
3300004082\|Ga0062384_100246305	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300004082\|Ga0062384_101377649	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300006050\|Ga0075028_100160281	All Organisms → cellular organisms → Bacteria → Acidobacteria	1193	Open in IMG/M
3300006059\|Ga0075017_100034528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3343	Open in IMG/M
3300006059\|Ga0075017_100498746	All Organisms → cellular organisms → Bacteria → Acidobacteria	923	Open in IMG/M
3300009038\|Ga0099829_10099865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2256	Open in IMG/M
3300009089\|Ga0099828_11002368	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300009521\|Ga0116222_1047651	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300009521\|Ga0116222_1155725	All Organisms → cellular organisms → Bacteria → Acidobacteria	984	Open in IMG/M
3300009521\|Ga0116222_1461199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300009522\|Ga0116218_1034208	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300009547\|Ga0116136_1101495	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300009624\|Ga0116105_1036662	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300009624\|Ga0116105_1100118	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300009634\|Ga0116124_1054691	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300009635\|Ga0116117_1156741	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300009698\|Ga0116216_10115964	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300009698\|Ga0116216_10472895	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300009759\|Ga0116101_1027481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1149	Open in IMG/M
3300009762\|Ga0116130_1103429	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300009824\|Ga0116219_10105819	All Organisms → cellular organisms → Bacteria → Acidobacteria	1640	Open in IMG/M
3300009824\|Ga0116219_10522865	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300009839\|Ga0116223_10799693	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300010379\|Ga0136449_102446530	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300011064\|Ga0138525_1031328	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300011269\|Ga0137392_10236361	All Organisms → cellular organisms → Bacteria → Acidobacteria	1501	Open in IMG/M
3300011270\|Ga0137391_10051345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3515	Open in IMG/M
3300011271\|Ga0137393_10571249	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300012189\|Ga0137388_10754467	All Organisms → cellular organisms → Bacteria → Acidobacteria	903	Open in IMG/M
3300012205\|Ga0137362_10218918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1641	Open in IMG/M
3300012205\|Ga0137362_10477952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M
3300012918\|Ga0137396_11113815	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300012918\|Ga0137396_11247258	Not Available	520	Open in IMG/M
3300012925\|Ga0137419_10841904	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300014158\|Ga0181521_10268295	All Organisms → cellular organisms → Bacteria → Acidobacteria	892	Open in IMG/M
3300014164\|Ga0181532_10438064	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300014169\|Ga0181531_10959487	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300015264\|Ga0137403_10459354	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300017925\|Ga0187856_1201266	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300017929\|Ga0187849_1213049	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300017931\|Ga0187877_1371157	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300017932\|Ga0187814_10317179	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300017933\|Ga0187801_10110989	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300017938\|Ga0187854_10420095	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300017942\|Ga0187808_10410349	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300017946\|Ga0187879_10145240	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300017961\|Ga0187778_10988083	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300017972\|Ga0187781_10947020	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300018003\|Ga0187876_1203147	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300018014\|Ga0187860_1405375	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300018025\|Ga0187885_10388168	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300018034\|Ga0187863_10750714	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300018038\|Ga0187855_10089169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1871	Open in IMG/M
3300018042\|Ga0187871_10115189	All Organisms → cellular organisms → Bacteria → Acidobacteria	1539	Open in IMG/M
3300018043\|Ga0187887_10287490	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300018062\|Ga0187784_11314894	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300018062\|Ga0187784_11387616	Not Available	557	Open in IMG/M
3300018088\|Ga0187771_10191020	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300018090\|Ga0187770_10202780	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300019082\|Ga0187852_1099264	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300019275\|Ga0187798_1434023	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300019278\|Ga0187800_1379810	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300020199\|Ga0179592_10479095	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300021407\|Ga0210383_11347798	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300022521\|Ga0224541_1020019	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300022533\|Ga0242662_10177743	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
(restricted) 3300023060\|Ga0224519_1032676	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300025412\|Ga0208194_1073414	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300025414\|Ga0208935_1039447	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300025581\|Ga0208355_1096447	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300026273\|Ga0209881_1043568	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300026446\|Ga0257178_1048210	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300026469\|Ga0257169_1004113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1558	Open in IMG/M
3300026480\|Ga0257177_1031971	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300027432\|Ga0209421_1024918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300027559\|Ga0209222_1003487	All Organisms → cellular organisms → Bacteria → Acidobacteria	3518	Open in IMG/M
3300027562\|Ga0209735_1095040	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300027568\|Ga0208042_1038508	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300027570\|Ga0208043_1105217	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300027625\|Ga0208044_1118482	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300027729\|Ga0209248_10025571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1843	Open in IMG/M
3300027846\|Ga0209180_10246760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300027854\|Ga0209517_10504502	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300027898\|Ga0209067_10110991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1433	Open in IMG/M
3300027905\|Ga0209415_11051496	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300027911\|Ga0209698_10456854	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300027911\|Ga0209698_10718580	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300028090\|Ga0255349_1052913	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300028795\|Ga0302227_10112484	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300028806\|Ga0302221_10124707	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300028859\|Ga0302265_1125787	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300028867\|Ga0302146_10382030	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300029908\|Ga0311341_10572691	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300030041\|Ga0302274_10139657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1258	Open in IMG/M
3300030494\|Ga0310037_10067104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1691	Open in IMG/M
3300030503\|Ga0311370_10933843	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300030688\|Ga0311345_10613205	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300031057\|Ga0170834_106532978	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300031233\|Ga0302307_10637808	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300031238\|Ga0265332_10074958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1439	Open in IMG/M
3300031754\|Ga0307475_10232831	All Organisms → cellular organisms → Bacteria → Acidobacteria	1475	Open in IMG/M
3300031962\|Ga0307479_11919562	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300033561\|Ga0371490_1051012	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300034090\|Ga0326723_0200610	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300034091\|Ga0326724_0456895	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.64%
Aquatic	Environmental → Aquatic	35.45%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Freshwater	Environmental → Aquatic → Freshwater	30.00%
Peat	Environmental → Terrestrial → Peat	13.64%
Sediment	Environmental → Aquatic → Sediment	5.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	30.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.45%
Loam	Environmental → Terrestrial → Soil → Loam	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.64%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	16.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.18%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.55%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.73%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001100	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011064	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023060 (restricted)	Peat soil microbial communities from Stordalen Mire, Sweden - IR.B.S.T0	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12703J13194_1079892	3300001100	Forest Soil	ATKPPSLGLPVQPGSAVGDLQALDSNDDLYADFDMLDDLQVQNNVTANP*
JGI12269J14319_103433042	3300001356	Peatlands Soil	SQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP*
JGIcombinedJ26739_1009007881	3300002245	Forest Soil	AIATKPPSLGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP*
JGI26346J50198_10037083	3300003351	Bog Forest Soil	FVETGAISTNPPSLGLPVEPGTAVGDLQALEKNDELYADFDVLDDLQVQDDVTANP*
Ga0062385_101506871	3300004080	Bog Forest Soil	VNKSYFVETGTIATNPPSLSLPVQPGTAVGDLQALEKNDELYADFDVLDDLQVQDDVTANP*
Ga0062384_1002463052	3300004082	Bog Forest Soil	VGNKSYVYQTEAIATKPPSLGLPVEPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANPQYSQAVD*
Ga0062384_1013776492	3300004082	Bog Forest Soil	NKSYFVDTGTIATNPPSLSLPVQPGTAVGDLQALEKNDELYADFDVLDDLQVQDDVTANP
Ga0075028_1001602813	3300006050	Watersheds	YTTSYTNKTEAINTKPPELSVPVVPGSAMGDLQALERNNELYADFDVLDELQVQDDVTANP*
Ga0075017_1000345281	3300006059	Watersheds	MSYITQTEAINVEAPKLSVPILPGTAVGDLQALERNNELYADFDVLDELQVQDDVTANP*
Ga0075017_1004987461	3300006059	Watersheds	ISPPETIATKPPSLGLPVEPGTAVGDLQALDRNDELYADFDVLDDLQVQDDVTANP*
Ga0099829_100998655	3300009038	Vadose Zone Soil	SYLFVAEGIPTTPPPLGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP*
Ga0099828_110023681	3300009089	Vadose Zone Soil	ETIATKPPSLGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP*
Ga0116222_10476513	3300009521	Peatlands Soil	FSQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP*
Ga0116222_11557252	3300009521	Peatlands Soil	MVGNKSYFSQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP*
Ga0116222_14611992	3300009521	Peatlands Soil	YIYVSETMPTMPPSLSLPVQPGTAVGDLQALQRNDELYADFDVLDELQVQDDVTANP*
Ga0116218_10342081	3300009522	Peatlands Soil	GAISTNPPSLGLPVEPGTAVGDLQALEKNDELYADFDVLDDLQVQDDVTANP*
Ga0116136_11014951	3300009547	Peatland	KSYIFQTEAISTNPPSLGLPVEPGTAVGDLQALERNDDLYADFDMLDELQVQDDVTANP*
Ga0116105_10366621	3300009624	Peatland	TEAIATNPPSLGVPVEPGTAVGDLQALENNDELYADFDVLDQLQVQDDGSTSPVDSQSVD
Ga0116105_11001181	3300009624	Peatland	NKSYLLETGKIATAPPALGLPVQPGTAVGDLQALDRNDELYADFDMLDELQVQDEVTANP
Ga0116124_10546913	3300009634	Peatland	LGAIPTNPPALGLPVEPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVTANP*
Ga0116117_11567411	3300009635	Peatland	AMTTKPPSLGLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVNANP*
Ga0116216_101159641	3300009698	Peatlands Soil	TNPPSLGLPVEPGTAVGDLQALEKNDELYADFDVLDDLQVQDDVTANP*
Ga0116216_104728952	3300009698	Peatlands Soil	EAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP*
Ga0116101_10274812	3300009759	Peatland	MTTKPPSLGLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVNANP*
Ga0116130_11034292	3300009762	Peatland	EPEAIATKPPSLGLPVEPGTAVGDLQALERNDELYADFDMLDELQVQDDVTANP*
Ga0116219_101058191	3300009824	Peatlands Soil	GALMAGNKSYFSQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP*
Ga0116219_105228652	3300009824	Peatlands Soil	AGNKSYFSQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP*
Ga0116223_107996931	3300009839	Peatlands Soil	YFSQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP*
Ga0136449_1024465302	3300010379	Peatlands Soil	AGNKSYFSQTEAIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDELQVQDDVTANP*
Ga0138525_10313281	3300011064	Peatlands Soil	QTEAIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDELQVQDDVTANP*
Ga0137392_102363614	3300011269	Vadose Zone Soil	VAEDIPTTPPALGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP*
Ga0137391_100513457	3300011270	Vadose Zone Soil	LRPTAPPGPTLPGTAVGDLQALDNNHELYADFDVLDDLEVQGNVTANP*
Ga0137393_105712491	3300011271	Vadose Zone Soil	GGKSYLFVAEDIPTTPPALGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP*
Ga0137388_107544671	3300012189	Vadose Zone Soil	GVGGKSYLFVAEDIPTTPPALGLPVQPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP*
Ga0137362_102189181	3300012205	Vadose Zone Soil	VAEGIPTRPPSLGLPVQPGTAVGDLQALEKNDELYADFDVLDDLQVQDDVTANP*
Ga0137362_104779521	3300012205	Vadose Zone Soil	IGIGGKSYIFVAEGIPTRPPSLGLPVQPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP*
Ga0137396_111138151	3300012918	Vadose Zone Soil	IGIGSRLYIPPTETIATKPPSIGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP*
Ga0137396_112472581	3300012918	Vadose Zone Soil	GGKSYIFVAEGIPTRPPSLGLPVQPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP*
Ga0137419_108419041	3300012925	Vadose Zone Soil	ETIATKPPSLGLPVQPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP*
Ga0181521_102682951	3300014158	Bog	IFQTEAISTNPPSLGLPVEPGTAVGDLQALERNDDLYADFDMLDELQVQDDVTANP*
Ga0181532_104380641	3300014164	Bog	SYVVEVGAISTKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDELQVQDDVTANP*
Ga0181531_109594872	3300014169	Bog	TIGIGSQSYLSEPETIATKPPALGLPVEPGTAVGDLQALDRNDELYADFDVLDDLQVQDDVTANP*
Ga0137403_104593542	3300015264	Vadose Zone Soil	MSVFVKICGLSTPETLATNPPSPGLPVQPGTAVGDLQALERNDALYADFDVLDELQVQDDVTANP*
Ga0187856_12012661	3300017925	Peatland	ISTNPPSLGLPVEPGTAVGDLQALERNDDLYADFDMLDELQVQDDVTANP
Ga0187849_12130491	3300017929	Peatland	KSYIFQTEAISTNPPSLGLPVEPGTAVGDLQALERNDDLYADFDMLDELQVQDDVTANP
Ga0187877_13711572	3300017931	Peatland	SYIKTGTIATKPPSLGLPVQPGTAVGDLQALEKNDELYADFDVLDELQVQDDVTANP
Ga0187814_103171791	3300017932	Freshwater Sediment	PTEAINTKPPELSVPVLPGTAVGDLQALERNNELYADFDVLDELQVQDDVTANP
Ga0187801_101109892	3300017933	Freshwater Sediment	VGGRPYLYQIEALKTDPPALGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP
Ga0187854_104200951	3300017938	Peatland	VQTAEIGIKPPALTIPVQPGTAVGDLQALEKNDELYADFDVLDQLQVQDDSTENP
Ga0187808_104103491	3300017942	Freshwater Sediment	GALLVGNRSYISQTDAIATKPPSLGLPVEPGTAVGDLQALDSNNDLYADFDVLDDLQVQDDVTANP
Ga0187879_101452401	3300017946	Peatland	QTEAIATNPPSLGVPVEPGTAVGDLQALENNDELYADFDVLDQLQVQDDGSTSPVDSQSV
Ga0187778_109880831	3300017961	Tropical Peatland	TETIATRPPALLLPVQPGTAVGDLQALEKNDDLYADFDMLDDLQVQDDVTANP
Ga0187781_109470202	3300017972	Tropical Peatland	YQMEAIKTDAPSLGLPVEPGTAVGDLQALDKNDDLYADFDMLDELQVQDDVTANP
Ga0187876_12031472	3300018003	Peatland	YFSQTEAIATKPPSLGLPVEPGTAVGDLQALDSNNDLYADFDVLDELQVQDDVTANP
Ga0187860_14053751	3300018014	Peatland	ITQSDTIATNPPSLSLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVTANP
Ga0187885_103881682	3300018025	Peatland	VVGSKSYISQSDTIATKPPSLGLPVEPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP
Ga0187863_107507141	3300018034	Peatland	QPEIIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVTANP
Ga0187855_100891691	3300018038	Peatland	NPPSLGVPVEPGTAVGDLQALENNDELYADFDVLDQLQVQDDGSTSPVDSQSVD
Ga0187871_101151893	3300018042	Peatland	QPETIATKPPSPGPPVQPGTAVGDLQALDRNDDLYADFDVLDQLQVQDDVTANP
Ga0187887_102874902	3300018043	Peatland	ETIATKPPSLSLPVEPGTAVGDLQALDRNDDLYADFDMLDDLQVQDEVTANP
Ga0187784_113148942	3300018062	Tropical Peatland	LLGNRSYLSQTDTIATKPPSLSLPVEPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVTANP
Ga0187784_113876161	3300018062	Tropical Peatland	GNRSYIMQTDEIATNPPAIEAPAQPGTAVADLQALESNHELYADFDVLDELQVQDDVTAN
Ga0187771_101910203	3300018088	Tropical Peatland	GNRSYISQTDTIATKPPSLGLPVQPGTAVGDLQALENNDDLYADFDVLDQLQVQDDVTAN
Ga0187770_102027803	3300018090	Tropical Peatland	VVLAIGNRSYLTQNETIATKPPSLTIPAQPGTAVGDLQALESNDELYADFDVLDDLQVQDSETANP
Ga0187852_10992643	3300019082	Peatland	IATNPPSLGLPVEPGTAVGDLQALERNDELYADFDMLDELQVQDDVTANP
Ga0187798_14340232	3300019275	Peatland	YLSQTDTIATKPPTLGLPVEPGTAVGDLQALEKNDELYADFDMLDDLQVQDDVTANP
Ga0187800_13798102	3300019278	Peatland	LLIGNKSYLYQMDAIKTDAPSLGLPVEPGTAVGDLQALDKNDDLYADFDMLDELQVQDDVTANP
Ga0179592_104790952	3300020199	Vadose Zone Soil	SRLYIPPTETIATKPPSLGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP
Ga0210383_113477982	3300021407	Soil	ETISTNPPALSLPVQPGTAVGDLQALDRNDDLYADFDVLDQLQVQDDVTANP
Ga0224541_10200191	3300022521	Soil	KSYMVETEAIATKPPTPGLPVQPGTAVGDLQALERNDDLYADFDMLDELQVQDDVTANP
Ga0242662_101777431	3300022533	Soil	ATKPPSLGLPVQPGTAVGELQALEGNDELYADFDVLDELKVQDDVTANP
(restricted) Ga0224519_10326762	3300023060	Soil	APSLGLPVEPGTAVGDLQALEKNDELYADFDVLDQLQVQDDVTANQGDSQSAD
Ga0208194_10734142	3300025412	Peatland	ISQTETIATKPPSLSLPVEPGTAVGDLQALDRNDDLYADFDMLDDLQVQDDVTANP
Ga0208935_10394471	3300025414	Peatland	SKSYLIEMGSIQTNPPSPGLPVQPGTAVGDLQALDSNHDLYADFDMLDELQVQDDVTANP
Ga0208355_10964472	3300025581	Arctic Peat Soil	LGVGIGNKLYISPTETIATKPPSLGLPVQPGTAVGDLQALERNDDLYADFDVLDELQVQDDVTTNP
Ga0209881_10435682	3300026273	Soil	VVGIGNKSYFSETEAIATKPPSLGLPVQPGTAVGDLQALERNSELYADFDVLDDLQVQDDVTENP
Ga0257178_10482101	3300026446	Soil	SHRSYIVQIESIATKPPSLGLPVQPGSAVGDLQALDSNDDLYADFDMLDDLQVQSDETAT
Ga0257169_10041131	3300026469	Soil	GGKSYLFVAEDIPTTPPALGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTAN
Ga0257177_10319712	3300026480	Soil	EDIPTTPPALGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP
Ga0209421_10249182	3300027432	Forest Soil	VEADRIATAPPALGLPVQPGTAVGDLQALDRNDELYADFDMLDELQVQDDVTANP
Ga0209222_10034871	3300027559	Forest Soil	VSNKSYLVELGSIQTRPPAPSLPVQPGTAVGDLQALDSNHDLYADFDMLDELQVQDDVTANP
Ga0209735_10950402	3300027562	Forest Soil	LAGAIGLGVAVSHNSYIVQTGSIATKPPSLGVPVQPGTAVGDLQALDRNDDLYADFDMLDDLQVQDNVTANP
Ga0208042_10385081	3300027568	Peatlands Soil	ISQTEAIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDELQVQDDVTANP
Ga0208043_11052172	3300027570	Peatlands Soil	MVGNKSYFSQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP
Ga0208044_11184822	3300027625	Peatlands Soil	MAGNKSYFSQTEAIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDELQVQDDVTANP
Ga0209248_100255714	3300027729	Bog Forest Soil	TDRMATNPPALGLPVQPGTAVGDLQALERNDELYADFDMLDDLQVQDNVTANP
Ga0209180_102467602	3300027846	Vadose Zone Soil	IPTTPPALGLPVQPGTAVGDLQALERNDELYADFDVLDELQVQDDVTANP
Ga0209517_105045021	3300027854	Peatlands Soil	YFSQTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP
Ga0209067_101109914	3300027898	Watersheds	TTPPSLGLPVQPGTAVGDLQALDRNDELYADFDMLDELQVQDDVNANPQDSQAVDKAD
Ga0209415_110514961	3300027905	Peatlands Soil	QTEAIATKPPSLGLPVEPGTAVGDLQALDTNNDLYADFDVLDDLQVQDDVTANP
Ga0209698_104568542	3300027911	Watersheds	PDTIATKPPSLGLPVEPGTAVGDLQALDRNDELYADFDMLDELQVQDDVTANPQDSQAVDKAD
Ga0209698_107185801	3300027911	Watersheds	FVETGTIATVPPSLGLPVEPGTAVGDLQALEKNDELYADFDVLDQLQVQDNVSANPADSQSVDWAPIEIKND
Ga0255349_10529131	3300028090	Soil	FVETGTIATTAPSLGLPVEPGTAVGDLQALEKNDELYADFDVLDQLQVQDDVTANQGDSQSAD
Ga0302227_101124841	3300028795	Palsa	ETIATKPPSPGPPVQPGTAVGDLQALDRNDDLYADFDVLDELQVQDDVTANP
Ga0302221_101247073	3300028806	Palsa	NKSYMVETEAIATKPPTPGLPVQPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP
Ga0302265_11257872	3300028859	Bog	MTTKPPSLGLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVNANP
Ga0302146_103820302	3300028867	Bog	NKSYLVETEALSTKPPSPGLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVNANPVDSQATLN
Ga0311341_105726911	3300029908	Bog	TGIGIRYKSSFFETDAMATKPPSLGLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQEDVNANP
Ga0302274_101396572	3300030041	Bog	LGTGIGIRYKSSFVETEAMTTKPPSLGLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVNANP
Ga0310037_100671043	3300030494	Peatlands Soil	TNPPSLGLPVEPGTAVGDLQALEKNDELYADFDVLDDLQVQDDVTANP
Ga0311370_109338431	3300030503	Palsa	QPETIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVTANP
Ga0311345_106132051	3300030688	Bog	SFVETEAMTTKPPSLGLPVQPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVNANP
Ga0170834_1065329782	3300031057	Forest Soil	VESGSIPTNIPSPGLPVQPGTAVGDLQALEKNDALYADFDVLDELQVQDDVTANP
Ga0302307_106378082	3300031233	Palsa	TIATKPPSLGLPVEPGTAVGDLQALDRNDDLYADFDVLDDLQVQDDVTANP
Ga0265332_100749581	3300031238	Rhizosphere	LLIGNRSYISTLETIATKPPALGLPVQPGTAVGDLQALEKNDELYADFDVLDELQVEDDDATANP
Ga0307475_102328311	3300031754	Hardwood Forest Soil	YLFVAEGIPTTPPLLGLPVQPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP
Ga0307479_119195622	3300031962	Hardwood Forest Soil	VAEGIPTTPPPLGLPVQPGTAVGDLQALERNDELYADFDVLDDLQVQDDVTANP
Ga0371490_10510121	3300033561	Peat Soil	LVAGNKSYITQTDAIATKPPSLGLPVQPGTAVGDLQALETNDDLYADFDVLDQLQVQDDVTANP
Ga0326723_0200610_697_876	3300034090	Peat Soil	MSYITQTEAINVEAPKLSVPVLPGTAVGDLQALERSNELYADFDVLDELQVQDEVTANP
Ga0326724_0456895_502_663	3300034091	Peat Soil	TATIPTKPPSLGLPVEPGTAVGDLQALEKNDELYADFDMLDELQVQDDVTANP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters