Metagenome / Metatranscriptome Family F086528

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086528
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	111 residues
Representative Sequence	VTSENNPASYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.63 %
% of genes near scaffold ends (potentially truncated)	35.45 %
% of genes from short scaffolds (< 2000 bps)	77.27 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.909 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.79% β-sheet: 0.00% Coil/Unstructured: 36.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00501	AMP-binding	52.73
PF00881	Nitroreductase	9.09
PF13193	AMP-binding_C	7.27
PF13556	HTH_30	1.82
PF13692	Glyco_trans_1_4	0.91
PF12368	Rhodanese_C	0.91
PF04055	Radical_SAM	0.91
PF01933	CofD	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0391	Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family	Carbohydrate transport and metabolism [G]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	61.82 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.09 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.82 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.09 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.82 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	25.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.82 %
Unclassified	root	N/A	3.64 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.82 %

Name	Rank	Taxonomy	Distribution
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	25.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.82 %
Unclassified	root	N/A	3.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.82 %

Name	Rank	Taxonomy	Distribution
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	25.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.82 %
Unclassified	root	N/A	3.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.82 %

Name	Rank	Taxonomy	Distribution
Sporichthya polymorpha	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	25.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.82 %
Unclassified	root	N/A	3.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_110880982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	577	Open in IMG/M
3300002245\|JGIcombinedJ26739_100163365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2105	Open in IMG/M
3300003321\|soilH1_10294920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1840	Open in IMG/M
3300004800\|Ga0058861_11227970	Not Available	632	Open in IMG/M
3300005332\|Ga0066388_101148319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1321	Open in IMG/M
3300005336\|Ga0070680_100843441	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005341\|Ga0070691_10564025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	667	Open in IMG/M
3300005344\|Ga0070661_100096371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2195	Open in IMG/M
3300005455\|Ga0070663_100009496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6025	Open in IMG/M
3300005524\|Ga0070737_10002262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23783	Open in IMG/M
3300005614\|Ga0068856_101034722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	839	Open in IMG/M
3300006059\|Ga0075017_100595651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	845	Open in IMG/M
3300009088\|Ga0099830_10037379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3335	Open in IMG/M
3300009089\|Ga0099828_10332882	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300009090\|Ga0099827_10670665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	895	Open in IMG/M
3300009093\|Ga0105240_11143198	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300009683\|Ga0116224_10104705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1370	Open in IMG/M
3300009698\|Ga0116216_10147116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1449	Open in IMG/M
3300010048\|Ga0126373_10120021	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300010143\|Ga0126322_1002626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	525	Open in IMG/M
3300010147\|Ga0126319_1026804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4546	Open in IMG/M
3300010366\|Ga0126379_13516508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	525	Open in IMG/M
3300010379\|Ga0136449_100519083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2061	Open in IMG/M
3300010379\|Ga0136449_100742806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1635	Open in IMG/M
3300011120\|Ga0150983_10284949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	557	Open in IMG/M
3300012189\|Ga0137388_10261034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1579	Open in IMG/M
3300012212\|Ga0150985_121453596	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300014169\|Ga0181531_10467118	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300016294\|Ga0182041_11048839	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300016341\|Ga0182035_10586904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	962	Open in IMG/M
3300016387\|Ga0182040_11301846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	613	Open in IMG/M
3300016422\|Ga0182039_11052777	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300017937\|Ga0187809_10316127	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300019189\|Ga0184585_136096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1089	Open in IMG/M
3300019240\|Ga0181510_1064548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	586	Open in IMG/M
3300019260\|Ga0181506_1398354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662	Open in IMG/M
3300020069\|Ga0197907_11171132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3389	Open in IMG/M
3300020075\|Ga0206349_1972312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3250	Open in IMG/M
3300020077\|Ga0206351_10230410	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300020080\|Ga0206350_10226852	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300020583\|Ga0210401_10552955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1013	Open in IMG/M
3300021170\|Ga0210400_11675834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	500	Open in IMG/M
3300021180\|Ga0210396_10895128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	757	Open in IMG/M
3300021180\|Ga0210396_11702600	Not Available	512	Open in IMG/M
3300021402\|Ga0210385_11301508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	557	Open in IMG/M
3300021404\|Ga0210389_10011925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6692	Open in IMG/M
3300021406\|Ga0210386_10232590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1569	Open in IMG/M
3300021560\|Ga0126371_11275491	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300022498\|Ga0242644_1035551	All Organisms → cellular organisms → Bacteria → Terrabacteria group	550	Open in IMG/M
3300022508\|Ga0222728_1025995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	878	Open in IMG/M
3300022522\|Ga0242659_1129739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	521	Open in IMG/M
3300022528\|Ga0242669_1000356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3299	Open in IMG/M
3300022528\|Ga0242669_1010355	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300022528\|Ga0242669_1014814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1060	Open in IMG/M
3300022532\|Ga0242655_10179316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	637	Open in IMG/M
3300022533\|Ga0242662_10063905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	981	Open in IMG/M
3300022708\|Ga0242670_1078862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	513	Open in IMG/M
3300022720\|Ga0242672_1089752	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300022724\|Ga0242665_10061097	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300024225\|Ga0224572_1063050	Not Available	685	Open in IMG/M
3300025904\|Ga0207647_10144739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1392	Open in IMG/M
3300025944\|Ga0207661_10171310	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300027651\|Ga0209217_1089162	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300027817\|Ga0209112_10003114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	4276	Open in IMG/M
3300027862\|Ga0209701_10048154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2742	Open in IMG/M
3300027895\|Ga0209624_10408523	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300027968\|Ga0209061_1009747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	6571	Open in IMG/M
3300028047\|Ga0209526_10066439	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300030494\|Ga0310037_10007073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5489	Open in IMG/M
3300030531\|Ga0210274_1891598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1599	Open in IMG/M
3300030629\|Ga0210268_1000534	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300030740\|Ga0265460_10025182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1790	Open in IMG/M
3300030743\|Ga0265461_10664744	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300030743\|Ga0265461_13839444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	511	Open in IMG/M
3300030950\|Ga0074034_10807054	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300030982\|Ga0265748_110231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	511	Open in IMG/M
3300031543\|Ga0318516_10363009	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300031544\|Ga0318534_10193114	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300031544\|Ga0318534_10373643	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031546\|Ga0318538_10116592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1392	Open in IMG/M
3300031546\|Ga0318538_10262555	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300031561\|Ga0318528_10150629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1239	Open in IMG/M
3300031573\|Ga0310915_11018515	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300031640\|Ga0318555_10066445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1856	Open in IMG/M
3300031680\|Ga0318574_10260517	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300031719\|Ga0306917_11551950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	509	Open in IMG/M
3300031736\|Ga0318501_10397812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	744	Open in IMG/M
3300031744\|Ga0306918_10529769	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300031751\|Ga0318494_10814529	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031768\|Ga0318509_10206774	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300031770\|Ga0318521_10274754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	988	Open in IMG/M
3300031770\|Ga0318521_10547210	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031954\|Ga0306926_10352604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1819	Open in IMG/M
3300032025\|Ga0318507_10509625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	523	Open in IMG/M
3300032043\|Ga0318556_10490538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	643	Open in IMG/M
3300032044\|Ga0318558_10167035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1065	Open in IMG/M
3300032059\|Ga0318533_10667501	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300032066\|Ga0318514_10315563	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300032076\|Ga0306924_11287392	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300032089\|Ga0318525_10388847	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300032160\|Ga0311301_11084964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300032261\|Ga0306920_101139898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300032515\|Ga0348332_10909797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3717	Open in IMG/M
3300032756\|Ga0315742_10136538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1422	Open in IMG/M
3300032895\|Ga0335074_10028194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7889	Open in IMG/M
3300032895\|Ga0335074_10045413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6078	Open in IMG/M
3300032896\|Ga0335075_10108197	All Organisms → cellular organisms → Bacteria	3610	Open in IMG/M
3300033134\|Ga0335073_10405076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1593	Open in IMG/M
3300033290\|Ga0318519_10876655	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.73%
Host-Associated	Host-Associated	7.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.36%
Aquatic	Environmental → Aquatic	6.36%
Plants	Host-Associated → Plants	6.36%
Human	Host-Associated → Human	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.45%
Freshwater	Environmental → Aquatic → Freshwater	5.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Sediment	Environmental → Aquatic → Sediment	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.91%
Digestive System	Host-Associated → Human → Digestive System	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.82%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.91%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.91%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.18%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.91%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010143	Soil microbial communities from Mekong Delta, Cambodia to study soil gas exchange rates - MK-CA-DRY metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300019189	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030950	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030982	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1108809822	3300000956	Soil	VTFEKKPDIYSSVQHWMEAVNARHRLSDREWEDRLAVLWSFCESLGKDPDTIIKEALDERNSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGGS*
JGIcombinedJ26739_1001633652	3300002245	Forest Soil	VTSKNNPESYKSVQHWMEVVNSRHDLSDRDWEDRLGVLWSFCDSLGKDPDSIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNIIRSFFINNGARVLTKPYPDVYGAKKS*
soilH1_102949202	3300003321	Sugarcane Root And Bulk Soil	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQTTHELQNVIRSFFINNGARVLTKPYPDVYGRGSS*
Ga0058861_112279701	3300004800	Host-Associated	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQTTHELQNVIRSFFIKH*
Ga0066388_1011483192	3300005332	Tropical Forest Soil	MEVVNSRNDLSGQDWDGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS*
Ga0070680_1008434412	3300005336	Corn Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPAVYGRGSS*
Ga0070691_105640251	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENMGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARV
Ga0070661_1000963712	3300005344	Corn Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS*
Ga0070663_1000094963	3300005455	Corn Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENMGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS*
Ga0070737_1000226211	3300005524	Surface Soil	VTFAKNPDAYSSVRHWMEVVNARHGLSDRDWAKRLAVLWGFCESLGKDPDTIIREALGERDSKLDYMRHLRRWAGGQAKGPQAIHELQNVIRSFFINNGARVLTKPYSDVYSRGGS*
Ga0068856_1010347221	3300005614	Corn Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENMGKDPDTIIKEALDERNSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS*
Ga0075017_1005956512	3300006059	Watersheds	VTSQTNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWANDQSLSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS*
Ga0099830_100373792	3300009088	Vadose Zone Soil	MEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS*
Ga0099828_103328822	3300009089	Vadose Zone Soil	MEVVNSRHDLSDRDWEERLGVLWRFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS*
Ga0099827_106706651	3300009090	Vadose Zone Soil	MEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNIIRSFFINNGARVLTKPYPDVYGAKKS*
Ga0105240_111431982	3300009093	Corn Rhizosphere	VTFEKKPDIYSSVQQWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQTTHELQNVIRSFFINNGARVLTKPYPDVYGRGSS*
Ga0116224_101047051	3300009683	Peatlands Soil	MMAGSTSDDWFKGERKLVTSENNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWADDQSRSLHATHELQNVIRSFFINNGARVLTKPYPD
Ga0116216_101471162	3300009698	Peatlands Soil	MMAGSTSDDWFKGERKLVTSENNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWADDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS*
Ga0126373_101200214	3300010048	Tropical Forest Soil	VTFEKNPDLYSSVQHWMEVVNARHKLSAQEWEDRLPVLWSFCESLGKDPDTIIKEALDERNSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYSRGGL*
Ga0126322_10026262	3300010143	Soil	MESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAQRPQTTHELQNVIRSFFINNGARVLTKPYPDVYGRGSS*
Ga0126319_10268042	3300010147	Soil	MAFETKPDIYSSVRHWMEVVNARHGLTERDWEERLTVLWSFCESLGKDPDTIIKEALDERDSKLDYMRHLRRWANEQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGGGGS*
Ga0126379_135165081	3300010366	Tropical Forest Soil	MEVVNSRNDLSGQDWDGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARV
Ga0136449_1005190832	3300010379	Peatlands Soil	MMAGSTSDDWFKGERKLVTSENNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWADDQSRSLHATHERQNVIRSFFINNGARVLTKPYPDVYGAKKS*
Ga0136449_1007428062	3300010379	Peatlands Soil	MEVVNSRHDLSDRDWEERLGVLSSFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKNS*
Ga0150983_102849492	3300011120	Forest Soil	MEVVNVRHGLSEREWEERLTVLWSFCESLGKDPDTIIKEALDERGSKLDYMRHLKRWANDQAKGPQATHELQNVIRSFFINNGARVLTK
Ga0137388_102610341	3300012189	Vadose Zone Soil	NPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWRFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS*
Ga0150985_1214535962	3300012212	Avena Fatua Rhizosphere	VTFEKKPDIYSSVQHWMEAVNARHRLSEREWEGRLAVLWSFCESLGKDPDSIINEALDERDSKLEYMHYLRRWANDQAKVPQATHELQNVIRSFFINNGARVLTKPYPDVYRRGGS*
Ga0181531_104671181	3300014169	Bog	VTTNRDPDSYASVQHWMEVVNSRHSLSEGDWTERLGVLWSFCDSLGKDPDAIIKDALDERDSKLDYMRHLRRWASEQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGGSRS*
Ga0182041_110488391	3300016294	Soil	WMEVVNSRNDLSDQDWEGRLGVLWSFCDSLDKDPDTIIQEALDERDNKLDYMRYLRRWSNDQSHSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0182035_105869042	3300016341	Soil	VAIKHDPDSYKSVQHWMEVVNSRNDLSDQDWEGRLGVLWSFCDSLDKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0182040_113018461	3300016387	Soil	VTFEKNPDLYSSVQHWMEVVNARHKLSAREWEERLPVLWSFCEILVKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQSTHELQNVIRSFFINNGARVLTKPYPDVYSRGGS
Ga0182039_110527772	3300016422	Soil	DLSDQDWEGRLGVLWSFCDSLDKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0187809_103161271	3300017937	Freshwater Sediment	MEVVNARHGLSDRDWAKRLAVLWGFCESLGKDPDTIIREALGERDSKLDYMRHLRRWAGGQAKGPQAIHELQNVIRSFFINNGARVLTKPYSDVYSRGGS
Ga0184585_1360962	3300019189	Soil	VTSQTNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDSIIQEALDERDNKLDYMRYLRRWANDQSLSLHATHELQNVIRSFFINNGARVLTKPYPDVYGSKKS
Ga0181510_10645481	3300019240	Peatland	DSYASVQHWMEVVNSRHSLSEGDWTERLGVLWSFCDSLGKDPDAIIKDALDERDSKLDYMRHLRRWASEQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGGSRS
Ga0181506_13983541	3300019260	Peatland	VTTNRDPDSYASVQHWMEVVNSRHSLSEGDWTERLGVLWSFCDSLGKDPDAIIKDALDERDSKLDYMRHLRRWASEQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGGSRS
Ga0197907_111711322	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQTTHELQNVIRSFFINNGARVLTKPYPDVYGRGSS
Ga0206349_19723124	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS
Ga0206351_102304102	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLPDREWEERLAVLWNFCENMGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS
Ga0206350_102268521	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	EKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS
Ga0210401_105529552	3300020583	Soil	VAFETKPDIYSSVRHWMEVVNVRHGLSEREWEERLTVLWSFCESLGKDPDTIIKEALDERGSKLDYMRHLKRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGGGGS
Ga0210400_116758342	3300021170	Soil	VTFEKKPDIYSSVQHWMEAVNARHRLSEQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYP
Ga0210396_108951282	3300021180	Soil	VTFEKKPDIYSSVQHWMEAVNARNRLSEQEWEGRLAALWSFCESLGKDPDTMIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0210396_117026002	3300021180	Soil	VTFEAKPDTYSSVQHWMEVVNARHGLSERDWDERLTVLSSYCDSLGKDPDTIIQEALDERDSKLDYMRHLRRWANDQARGLQATHELQNVVRSFF
Ga0210385_113015081	3300021402	Soil	VTTNRDPDSYASVQHWMEVVNSRHSLSEEDWTERLGVLWSFCDSLGKDPDAIIKDALDERDSKLDYMRHLRRWASEQSRGLQATHELQNVIRSFFINNGARVLTKPYPDVYGGSRS
Ga0210389_100119252	3300021404	Soil	VTFEKKPDIYSSVQHWMEAVNARHRLSEQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0210386_102325901	3300021406	Soil	VTFEKKPDIYSSVQHWMEAVNARNRLSEQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0126371_112754912	3300021560	Tropical Forest Soil	VAYKHDPDSYKSVQHWMEVVNSRNDLSGQDWDGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0242644_10355512	3300022498	Soil	VTFEKKPDIYSSVQHWMEAVNARNRLSEQEWEGRLAALWSFCESLGKDPDTMIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFF
Ga0222728_10259952	3300022508	Soil	VTFEKKPDLYSSVQHWMEVVNARHGLSEREWEERLAVLWSFCESLAKDPDTIIREALDERNSKLDYMRHLRRWANDQAKGPQSTHELQNVIRSFFINNGARVLTKPYPDVYSRGGA
Ga0242659_11297392	3300022522	Soil	PDIYSSVQHWMEAVNARNRLSEQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0242669_10003564	3300022528	Soil	MEVVNVRHGLSEREWEERLTVLWSFCESLGKDPDTIIKEALDERGSKLDYMRHLKRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGGGGS
Ga0242669_10103552	3300022528	Soil	VTFEKKPDIYSSVQHWMEAVNARHRLSEQEWEGRLVALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLKRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0242669_10148141	3300022528	Soil	LSEQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0242655_101793162	3300022532	Soil	VAFETKPDIYSSVRHWMEVVNVRHGLSEREWEERLTVLWSFCESLGKDPDTIIKEALDERGSKLDYMRHLKRWANDQAKGPQATHELQNVIRSFFINNGARGLTKPYPDVYGGGGS
Ga0242662_100639052	3300022533	Soil	VTFEEKPDLYSSVQHWMEVVNARHGLSEREWEERLAVLWSFCESLAKDPDTIIREALDERNSKLDYMRHLRRWANDQAKGPQSTHELQNVIRSFFINNGARVLTKPYPDVYSRGGS
Ga0242670_10788621	3300022708	Soil	VTFEKKPDIYSSVQHWMEAVNARNRLSEQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGG
Ga0242672_10897521	3300022720	Soil	WMEAVNARHRLSEQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0242665_100610972	3300022724	Soil	VTFEKKPDIYSSGQHWMEAVNARHRLSQQEWEGRLAALWSFCESLGKDPDTIIKEALDERGSKLDYMRHLKRWANDQAKGLQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0224572_10630501	3300024225	Rhizosphere	VTSQTNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDSIIQEALDERDNKLDYMRYLRRWANDQSLSLHATHELQNVIRSFFI
Ga0207647_101447392	3300025904	Corn Rhizosphere	VTFEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENMGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS
Ga0207661_101713102	3300025944	Corn Rhizosphere	FEKKPDIYSSVQHWMESVNARHRLSDREWEERLAVLWNFCENLGKDPDTIIKEALDERDSKLDYMRHLRRWANDQAKGPQATHELQNVIRSFFINNGARVLTKPYPDVYGRGSS
Ga0209217_10891622	3300027651	Forest Soil	VTSKNNPESYKSVQHWMEVVNSRHDLSDRDWEDRLGVLWSFCDSLGKDPDSIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNIIRSFFINNGARVLTKPYPDVYGAKKS
Ga0209112_100031144	3300027817	Forest Soil	VTFEKKPDIYSSVQHWMEAVNARNRLSEQEWEGRLAALWSFCGSLGKDPDTIIKEALDERGSKLDYMRHLRRWANDQAKGLQATHELQNVIRSFFINNGARVLTKPYPDVYSRGGL
Ga0209701_100481543	3300027862	Vadose Zone Soil	VTSNNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWRFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS
Ga0209624_104085232	3300027895	Forest Soil	DSYASVQHWMEVVNSRHSLSEEDWTERLGVLWSFCDSLGKDPDAIIKDALDERDSKLDYMRHLRRWASEQSRGLQATHELQNVIRSFFINNGARVLTKPYPDVYGGSRS
Ga0209061_10097477	3300027968	Surface Soil	VTFAKNPDAYSSVRHWMEVVNARHGLSDRDWAKRLAVLWGFCESLGKDPDTIIREALGERDSKLDYMRHLRRWAGGQAKGPQAIHELQNVIRSFFINNGARVLTKPYSDVYSRGGS
Ga0209526_100664392	3300028047	Forest Soil	VTSKNNPESYTSVQHWMEVVNSRHDLSDRDWEDRLGVLWSFCDSLGKDPDSIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNIIRSFFINNGARVLTKPYPDVYGAKKS
Ga0310037_100070734	3300030494	Peatlands Soil	MMAGSTSDDWFKGERKLVTSENNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWADDQSRSLHATHERQNVIRSFFINNGARVLTKPYPDVYGAKKS
Ga0210274_18915981	3300030531	Soil	KGERKLVTSENNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWANDQSRGLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS
Ga0210268_10005343	3300030629	Soil	VTSQNSPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLRSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWANDQSLSPHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS
Ga0265460_100251823	3300030740	Soil	VTSQNSPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYP
Ga0265461_106647441	3300030743	Soil	FEKNPDIYSSVQHWMEAVNARHRLSEQEWEGRLAVLWSFCESLGKDPDTIIKEALDERDSKLDYMRHLRRWASDQTKGPQTTHELQNVIRSFFINNGARVLTKPYPDVYSRGG
Ga0265461_138394441	3300030743	Soil	VTSQTNPESYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRYLRRWATDQSLSLHATHELQNVIRSFFINNGARVLTKPYPDVYGSKKS
Ga0074034_108070541	3300030950	Soil	KLVTSENNPASYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS
Ga0265748_1102312	3300030982	Soil	NARHRLSEQEWEGRLAVLWSFCESLGKDPDTIIKEALDERDSKLDYMRHLRRWASDQAKGPQTTHELQNVIRSFFINNGARVLTKPYPDVYGGAGS
Ga0318516_103630091	3300031543	Soil	MAAQGRNEQVTINHDPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318534_101931141	3300031544	Soil	VTINHDPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318534_103736432	3300031544	Soil	VLNSRNDLSGQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318538_101165922	3300031546	Soil	VADKYDPDSYRSVQHWMEVVNSRNDLSDQDWEGRLGVLWSFCDSLDKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318538_102625551	3300031546	Soil	EVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318528_101506292	3300031561	Soil	VAIKHDPDSYKSVQHWMEVVNSRNDLSGQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0310915_110185151	3300031573	Soil	LNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318555_100664452	3300031640	Soil	KHDPDSYKSVQHWMEVVNSRNDLSDQDWEGRLGVLWSFCDSLDKDPDTIIQEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318574_102605172	3300031680	Soil	NSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0306917_115519501	3300031719	Soil	VADKYDPDSYRSVQHWMEVVNSRNDLSGQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318501_103978121	3300031736	Soil	VAYKHDPDSYKSVQHWMEVVNSRNDLSGQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0306918_105297691	3300031744	Soil	VSINHDPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318494_108145291	3300031751	Soil	TSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318509_102067742	3300031768	Soil	VSINHEPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318521_102747542	3300031770	Soil	MAAQGRNEQVTINHDPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPD
Ga0318521_105472101	3300031770	Soil	YKSVQHWMEVVNSRNDLSGQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0306926_103526042	3300031954	Soil	VAHKHDPDSYKSVQHWMEVVNSRNDLSGQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRHLRRWANDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318507_105096252	3300032025	Soil	PLMAAQGRNEQVTINHDPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0318556_104905381	3300032043	Soil	VADKYDPDSYRSVQHWMEVVNSRNDLSDQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318558_101670352	3300032044	Soil	VADKYDPDSYRSVQHWMEVVNSRNDLSDQDWEGRLGVLWSFCDSLDKDPDTIIQEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318533_106675011	3300032059	Soil	RSVQHWMEVVNSRNDLSDQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318514_103155632	3300032066	Soil	NEQVSINHDPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0306924_112873922	3300032076	Soil	VAYKHDPDSYKSVQHWMEVVNSRNDLSGQDWEGRLGVLCNFCDSLDKDPDTIIKEALDERDNKLDYMRYLRRWSNDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS
Ga0318525_103888471	3300032089	Soil	YTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0311301_110849642	3300032160	Peatlands Soil	WMEVVNSRHDLSDRDWEERLGVLSSFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKNS
Ga0306920_1011398982	3300032261	Soil	AQGRNEQVSINHDPDSYTSVQHWMEVLNSRHDLSRQDWDERLGVLWRFCDSLGQDPDTIIRQALDERENKLDYMRHLRRWASEQAHSPYAVHELQNVIRSFFINNGARVLTKPYPDVYGAKRS
Ga0348332_109097973	3300032515	Plant Litter	VTSQTNPESYKSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDSIIQEALDERDNKLDYMRYLRRWANDQSLSLHATHELQNVIRSFFINNGARVLTKPYPDVYGSKKS
Ga0315742_101365382	3300032756	Forest Soil	VTSENNPASYTSVQHWMEVVNSRHDLSDRDWEERLGVLWSFCDSLGKDPDTIIQEALDERDNKLDYMRHLRRWANDQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGAKKS
Ga0335074_100281947	3300032895	Soil	VTFEKKPDIYSSVQHWMEAVNARHRLSDREWEERLAVLWSFCESLGKDPDTIIKEALDERSNKLVYMRYLRSWVNDQAKAPHATHGMQNVIRSFFINNGARVLTKPYPDVYSRGG
Ga0335074_100454131	3300032895	Soil	VTTNRDPDSYASVQHWMEVVNSRHSLSEGDWTERLGVLWSFCDSLGKDPDAIIRDALDGRDSKLDYMRHLRRWASEQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGGSRS
Ga0335075_101081973	3300032896	Soil	VTFEKKPDIYSSVQHWMEAVNARHRLSEEEWEGRLAVLWEFCESLGKDPDAVIKEALDERDSKLDYMRYLRRWANDQAKTPQATHELQNVIRSFFINNGARVLTKPYPDVYSRGGS
Ga0335073_103947442	3300033134	Soil	GDWTERLGVLWSFCDSLGKDPDAIIRDALDGRDSKLDYMRHLRRWASEQSRSLHATHELQNVIRSFFINNGARVLTKPYPDVYGGSRS
Ga0335073_104050762	3300033134	Soil	VTFEKKPDIYSSVQHWMEAVNARHRLSDREWGERLAVLWSFCESLGKDPDTIIKEALDERSNKLVYMRYLRSWVNDQAKAPHATHGMQNVIRSFFINNGARVLTKPYPDVYSRGG
Ga0318519_108766551	3300033290	Soil	VQHWMEVVNSRNDLSGQDWEGRLGVLWSFCDSLDKDPDTIIKEALDERDNKLDYMRHLRRWANDQSRSPQATHELQNVIRSFFINNGARVLTKPYPDVYGAKGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086528

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences