Metagenome / Metatranscriptome Family F086488

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086488
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	99 residues
Representative Sequence	MQKMINETQAKQIAVEYVKTKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQE
Number of Associated Samples	69
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.98 %
% of genes near scaffold ends (potentially truncated)	16.36 %
% of genes from short scaffolds (< 2000 bps)	75.45 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (81.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (28.182 % of family members)
Environment Ontology (ENVO)	Unclassified (83.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (58.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.13% β-sheet: 30.33% Coil/Unstructured: 47.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF05532	CsbD	6.36
PF02585	PIG-L	1.82
PF05239	PRC	1.82
PF04188	Mannosyl_trans2	1.82
PF03051	Peptidase_C1_2	1.82
PF04020	Phage_holin_4_2	0.91
PF11999	Ice_binding	0.91
PF08734	GYD	0.91
PF13240	zinc_ribbon_2	0.91
PF02643	DUF192	0.91
PF01012	ETF	0.91
PF01212	Beta_elim_lyase	0.91
PF01566	Nramp	0.91
PF00185	OTCace	0.91
PF13620	CarboxypepD_reg	0.91
PF02163	Peptidase_M50	0.91
PF00118	Cpn60_TCP1	0.91
PF01949	DUF99	0.91
PF03332	PMM	0.91
PF00583	Acetyltransf_1	0.91
PF00534	Glycos_transf_1	0.91
PF13091	PLDc_2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	6.36
COG5542	Mannosyltransferase related to Gpi18	Carbohydrate transport and metabolism [G]	1.82
COG3579	Aminopeptidase C	Amino acid transport and metabolism [E]	1.82
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.82
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.82
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.91
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.91
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.91
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.91
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.91
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.91
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.91
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.91
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.91
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.91
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.91
COG1628	Endonuclease V homolog, UPF0215 family	General function prediction only [R]	0.91
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.91
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.91
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.91
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.91
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.91
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.91
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.91
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.91
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.91
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
All Organisms	root	All Organisms	18.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
cellular organisms	root	All Organisms → cellular organisms	18.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	14.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.82 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	1.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	0.91 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → environmental samples	0.91 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1.82 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.82 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Thermotogae	class	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae	0.91 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.91 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.82 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1.82 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.91 %
Mesoaciditogales	order	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Mesoaciditogales	0.91 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.82 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1.82 %
Mesoaciditogaceae	family	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Mesoaciditogales → Mesoaciditogaceae	0.91 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.91 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.82 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1.82 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.91 %
Mesoaciditogaceae	family	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Mesoaciditogales → Mesoaciditogaceae	0.91 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.82 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1.82 %
Methanobacterium	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium	0.91 %
Mesoaciditogaceae	family	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Mesoaciditogales → Mesoaciditogaceae	0.91 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.82 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.82 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1.82 %
Methanobacterium formicicum	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → Methanobacterium formicicum	0.91 %
Mesoaciditogaceae	family	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Mesoaciditogales → Mesoaciditogaceae	0.91 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10100697	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1261	Open in IMG/M
3300004401\|Ga0068980_1148996	Not Available	524	Open in IMG/M
3300004401\|Ga0068980_1161945	Not Available	796	Open in IMG/M
3300004477\|Ga0068971_1564132	Not Available	606	Open in IMG/M
3300004594\|Ga0068976_1224947	Not Available	657	Open in IMG/M
3300004617\|Ga0068955_1396387	Not Available	657	Open in IMG/M
3300004964\|Ga0072331_1143231	Not Available	508	Open in IMG/M
3300009519\|Ga0116108_1000159	All Organisms → cellular organisms → Archaea	47582	Open in IMG/M
3300009547\|Ga0116136_1000284	Not Available	33293	Open in IMG/M
3300009548\|Ga0116107_1057663	Not Available	1291	Open in IMG/M
3300009552\|Ga0116138_1000333	Not Available	29691	Open in IMG/M
3300009614\|Ga0116104_1077738	Not Available	680	Open in IMG/M
3300009615\|Ga0116103_1085127	Not Available	825	Open in IMG/M
3300009617\|Ga0116123_1167202	Not Available	563	Open in IMG/M
3300009618\|Ga0116127_1143784	Not Available	600	Open in IMG/M
3300009621\|Ga0116116_1077689	Not Available	940	Open in IMG/M
3300009621\|Ga0116116_1093267	Not Available	833	Open in IMG/M
3300009629\|Ga0116119_1084924	Not Available	799	Open in IMG/M
3300009631\|Ga0116115_1114987	Not Available	687	Open in IMG/M
3300009634\|Ga0116124_1000984	All Organisms → cellular organisms → Archaea	23278	Open in IMG/M
3300009646\|Ga0116132_1134140	Not Available	756	Open in IMG/M
3300009646\|Ga0116132_1263033	Not Available	525	Open in IMG/M
3300009760\|Ga0116131_1074354	Not Available	1050	Open in IMG/M
3300009760\|Ga0116131_1079586	Not Available	1006	Open in IMG/M
3300009839\|Ga0116223_10076623	Not Available	2140	Open in IMG/M
3300010339\|Ga0074046_10121571	Not Available	1676	Open in IMG/M
3300010339\|Ga0074046_10181577	All Organisms → cellular organisms → Archaea	1330	Open in IMG/M
3300010339\|Ga0074046_10237953	Not Available	1134	Open in IMG/M
3300010339\|Ga0074046_10271120	Not Available	1049	Open in IMG/M
3300010339\|Ga0074046_10318484	Not Available	952	Open in IMG/M
3300010339\|Ga0074046_10906893	Not Available	512	Open in IMG/M
3300010341\|Ga0074045_10209624	Not Available	1302	Open in IMG/M
3300010341\|Ga0074045_10575439	Not Available	720	Open in IMG/M
3300010341\|Ga0074045_10807986	Not Available	593	Open in IMG/M
3300010379\|Ga0136449_100099750	Not Available	5973	Open in IMG/M
3300011020\|Ga0138602_129312	Not Available	628	Open in IMG/M
3300011060\|Ga0138583_1058018	Not Available	590	Open in IMG/M
3300011075\|Ga0138555_1141522	Not Available	547	Open in IMG/M
3300011085\|Ga0138581_1081213	Not Available	699	Open in IMG/M
3300011088\|Ga0138576_1144339	Not Available	656	Open in IMG/M
3300011108\|Ga0138601_110183	Not Available	658	Open in IMG/M
3300011108\|Ga0138601_120956	Not Available	535	Open in IMG/M
3300012931\|Ga0153915_13195060	Not Available	532	Open in IMG/M
3300012964\|Ga0153916_12540032	Not Available	577	Open in IMG/M
3300012964\|Ga0153916_13245901	Not Available	511	Open in IMG/M
3300014151\|Ga0181539_1000019	All Organisms → cellular organisms → Archaea	147566	Open in IMG/M
3300014151\|Ga0181539_1000283	All Organisms → cellular organisms → Archaea	62027	Open in IMG/M
3300014152\|Ga0181533_1029976	All Organisms → cellular organisms → Archaea	3183	Open in IMG/M
3300014152\|Ga0181533_1056943	Not Available	1970	Open in IMG/M
3300014153\|Ga0181527_1073168	Not Available	1712	Open in IMG/M
3300014153\|Ga0181527_1173547	Not Available	921	Open in IMG/M
3300014155\|Ga0181524_10066576	Not Available	2172	Open in IMG/M
3300014155\|Ga0181524_10326765	Not Available	690	Open in IMG/M
3300014158\|Ga0181521_10167750	Not Available	1240	Open in IMG/M
3300014502\|Ga0182021_10183984	All Organisms → cellular organisms → Archaea	2438	Open in IMG/M
3300017925\|Ga0187856_1000538	Not Available	34273	Open in IMG/M
3300017925\|Ga0187856_1090599	Not Available	1234	Open in IMG/M
3300017929\|Ga0187849_1000588	All Organisms → cellular organisms → Archaea	47582	Open in IMG/M
3300017931\|Ga0187877_1082912	Not Available	1371	Open in IMG/M
3300017931\|Ga0187877_1238374	Not Available	704	Open in IMG/M
3300017938\|Ga0187854_10157468	Not Available	1027	Open in IMG/M
3300017940\|Ga0187853_10475819	Not Available	547	Open in IMG/M
3300017941\|Ga0187850_10020148	All Organisms → cellular organisms → Archaea	3858	Open in IMG/M
3300017941\|Ga0187850_10062233	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1887	Open in IMG/M
3300017941\|Ga0187850_10186043	Not Available	957	Open in IMG/M
3300017941\|Ga0187850_10352260	Not Available	646	Open in IMG/M
3300017998\|Ga0187870_1129632	Not Available	941	Open in IMG/M
3300017998\|Ga0187870_1296377	Not Available	545	Open in IMG/M
3300018004\|Ga0187865_1037672	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	2039	Open in IMG/M
3300018005\|Ga0187878_1060429	Not Available	1664	Open in IMG/M
3300018005\|Ga0187878_1077872	Not Available	1404	Open in IMG/M
3300018009\|Ga0187884_10083541	Not Available	1417	Open in IMG/M
3300018013\|Ga0187873_1097809	Not Available	1167	Open in IMG/M
3300018015\|Ga0187866_1056839	Not Available	1751	Open in IMG/M
3300018018\|Ga0187886_1024282	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3225	Open in IMG/M
3300018019\|Ga0187874_10169961	Not Available	915	Open in IMG/M
3300018019\|Ga0187874_10308848	Not Available	643	Open in IMG/M
3300018021\|Ga0187882_1251210	Not Available	684	Open in IMG/M
3300018022\|Ga0187864_10207437	Not Available	924	Open in IMG/M
3300018023\|Ga0187889_10094024	Not Available	1493	Open in IMG/M
3300018024\|Ga0187881_10054536	Not Available	1928	Open in IMG/M
3300018024\|Ga0187881_10195020	Not Available	864	Open in IMG/M
3300018026\|Ga0187857_10150114	Not Available	1108	Open in IMG/M
3300018026\|Ga0187857_10156746	Not Available	1079	Open in IMG/M
3300018030\|Ga0187869_10134607	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1232	Open in IMG/M
3300021856\|Ga0213850_1439091	Not Available	664	Open in IMG/M
3300022185\|Ga0079039_1367206	Not Available	679	Open in IMG/M
3300025432\|Ga0208821_1010000	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300025439\|Ga0208323_1061033	Not Available	659	Open in IMG/M
3300027854\|Ga0209517_10008125	Not Available	12352	Open in IMG/M
3300027854\|Ga0209517_10082098	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2237	Open in IMG/M
3300027896\|Ga0209777_10151140	Not Available	1914	Open in IMG/M
3300027905\|Ga0209415_10283229	Not Available	1450	Open in IMG/M
3300032160\|Ga0311301_10201238	Not Available	3413	Open in IMG/M
3300033402\|Ga0326728_10002794	All Organisms → cellular organisms → Archaea	56914	Open in IMG/M
3300033402\|Ga0326728_10037982	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	7674	Open in IMG/M
3300033402\|Ga0326728_10054989	Not Available	5682	Open in IMG/M
3300033402\|Ga0326728_10058571	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → Methanobacterium formicicum	5398	Open in IMG/M
3300033402\|Ga0326728_10201209	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Mesoaciditogales → Mesoaciditogaceae	2006	Open in IMG/M
3300033405\|Ga0326727_10092232	Not Available	4079	Open in IMG/M
3300033405\|Ga0326727_10238600	Not Available	1902	Open in IMG/M
3300033405\|Ga0326727_10239532	Not Available	1896	Open in IMG/M
3300033405\|Ga0326727_10616682	Not Available	897	Open in IMG/M
3300033405\|Ga0326727_10720828	Not Available	791	Open in IMG/M
3300033405\|Ga0326727_10899274	Not Available	663	Open in IMG/M
3300033405\|Ga0326727_10916189	Not Available	653	Open in IMG/M
3300034091\|Ga0326724_0189762	Not Available	1231	Open in IMG/M
3300034091\|Ga0326724_0364897	Not Available	778	Open in IMG/M
3300034091\|Ga0326724_0383732	Not Available	751	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	59.09%
Terrestrial	Environmental → Terrestrial	40.91%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.09%
Soil	Environmental → Terrestrial → Soil	27.27%
Peat	Environmental → Terrestrial → Peat	13.64%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	57.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.09%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.91%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	36.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	20.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	28.18%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	18.18%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	17.27%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	13.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.18%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	8.18%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.73%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.91%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.91%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004401	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004477	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004594	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004617	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004964	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011020	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 78 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011075	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011088	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011108	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300021856	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - LL:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101006971	3300000567	Peatlands Soil	YVKTKESGAQAEIKSIERQDMWVMETETKESKGIQYAHLTVSGTGEVKDYTRTTFQSVSTSERVTSKLRGIFSRSKQEEN*
Ga0068980_11489961	3300004401	Peatlands Soil	MQNMINETEAKQIALDYVKTKESGAQAEIKSVERQDMWVMETQTKEAKGIQYANLTVSGTGEVKDYARTTFQSVSTPQRITSKLRGIFSRNKQEEN*
Ga0068980_11619451	3300004401	Peatlands Soil	MIDETQAKQIALEYVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIKSKLRSIFSRGKQEETNTKPLAPNEK*
Ga0068971_15641322	3300004477	Peatlands Soil	MIDETQAKQIALEFVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIKSKLRSIFSRGKQEETNTKPLAPNEK*
Ga0068976_12249472	3300004594	Peatlands Soil	MQKMIDETQAKQIALEFVKTKELGAQTEIKSAERQDICVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIKSKLRSIFSRGKQEETNTKPLAPNEK*
Ga0068955_13963872	3300004617	Peatlands Soil	MQKMIDETQAKQIALEFVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSSTGEVRDYEKTRFQSGSVSQRITSKLRSIFSHGKQEETNTKPRAPNEK*
Ga0072331_11432311	3300004964	Peatlands Soil	MNIQNMINETEAKQIALDYVKTKESGAQAEIKSVERQDMWVMETQTKEAKGIQYANLTVSGTGEVKDYARTTFQSVSTPQRITSKLRGIFSRNKQEEN*
Ga0116108_100015934	3300009519	Peatland	MPRTIDEAEAKKIALEYVKKEESGAQAEIKSVERQDIWVLEISWAMQTEKTKGTQYANVTVSGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS*
Ga0116136_100028436	3300009547	Peatland	MQKMINETQAKQIAVEYVKAKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEEINTKPLAPIKE*
Ga0116107_10576632	3300009548	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVEQQNIWVMETQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKQEES*
Ga0116138_100033330	3300009552	Peatland	MPRTIDEAEAKQIALECVKKKESGVQAEIKSVERQDIWVLEISWPMQTEKTKGTQYANVTISGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS*
Ga0116104_10777381	3300009614	Peatland	MNVSMPRTIDEAEAKQIALGYVKQKESGVQAEIKSVERQDIWVLEISWPMQTEKTKGTQYANVTISGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS*
Ga0116103_10851271	3300009615	Peatland	MQRTINETDAKQISLECVKAKESGAQAEIKSVEQHDMLVAQTKETNGIKYANVTVSGTGEVEDYKWTTFQSVSTSQRIKSKLRSIFARGNQEEIYRAYFGAASKKRARVMR
Ga0116123_11672021	3300009617	Peatland	MQRMINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYKRTTFTTRVSMPDKIKSKL
Ga0116127_11437841	3300009618	Peatland	MQKMIDETQAKQIALEYVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIK
Ga0116116_10776892	3300009621	Peatland	MPRTIDEAEAKQIALEYVKKQESGAQAEIKSVEQQNIWVMETQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKQEES*
Ga0116116_10932672	3300009621	Peatland	MNVSMPKTIDEAEAKQIALEYVKKKESDAQAEIQSVERQDLWVLEVSWAMQTEKTKGTQYANVTVSGTGEVRDYEKTRFQSSSVSQRITSKLRSIFSRSKSGEQS*
Ga0116119_10849241	3300009629	Peatland	MQRMINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEEINTKPLAPIKE*
Ga0116115_11149871	3300009631	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVEQQNIWVMETQTKETKGTQYASITVSGTCQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKQEES*
Ga0116124_100098428	3300009634	Peatland	NVSMPRTIDEAEAKKIALEYVKKEESGAQAEIKSVERQDIWVLEISWAMQTEKTKGTQYANVTVSGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS*
Ga0116132_11341402	3300009646	Peatland	MQRMINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYKRTTFTTRVSMPDKIKSKLRSIFSRSK*
Ga0116132_12630331	3300009646	Peatland	MNVSMPKTIDEAEAKQIALEYVKKKESDAQAEIQSVERQDLWVLEVSWAMQTEKTKGTQYANVTVSGTGEVRDYEKTRFQSSSVSQRITSKLRSIFSRSKSREQS*
Ga0116131_10743541	3300009760	Peatland	MQKMIDETQAKQIALEYVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRITSKLRSIFSHGKQEETNTKPQ
Ga0116131_10795861	3300009760	Peatland	MQRMINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYQKTRFQSGSVSQRIKSKLRSIFSRSK*
Ga0116223_100766231	3300009839	Peatlands Soil	MQNMINETEAKQIALEYVKTKESGAQAEIKSIERQDMWVMETETKESKGIQYAHLTVSGTGEVKDYTRTTFQSVSTSERVT*
Ga0074046_101215711	3300010339	Bog Forest Soil	MQKMIDETQAKQIALEYVKTKESGAQTEIKSAERQDIWVMETQTKETKGTQYANVTVSRTGEVKDYEKTRFQSGSVSQRIKSKLRSIFSRGKQEETNTKPLAPNEK*
Ga0074046_101815773	3300010339	Bog Forest Soil	MQNMINETEAKQIALEYVKTKESGAQAEIKSIERQDMWVMEMQTKESKGIQYANLSVSGRGEVKDYERTTFQSVSTSERITSKLRGIFSRSKQEEN*
Ga0074046_102379532	3300010339	Bog Forest Soil	MQRMINETEAKQIGLEYVKTRESGAQTQIKSVERQDIWIMETQTKETKGDQYANVTVSGTGEVKDYKRTTFTTRVSLPQRIKSKLRSIFSRGK*
Ga0074046_102711201	3300010339	Bog Forest Soil	MQNMINESEAKQIALEYVKTKESGAQAEIKSIERQDMWVMETQTKESKGIQYANLTVSGTGEVKDYNRTTFQSVSTPQRITSKLRGIFSRSKQEEN*
Ga0074046_103184841	3300010339	Bog Forest Soil	MQKMINETEAKHIALEYVRKHESGAQSEIKSVERQNIWVMETQTKETNGTQYANITVSGTGEIKDYEKTVFKTGISQRIKSKLQHIFSRNKQEKS*
Ga0074046_109068931	3300010339	Bog Forest Soil	MQNMINESEAKQIAVEYVKTKESGAQAEIKSIERQDMWVMETQTKESKGIQYANLTVSGTGEVKDYNRTTFQSVSTPQR
Ga0074045_102096241	3300010341	Bog Forest Soil	MQKMIDETQAKQIALEYVKTKESGAQTEIKSAARQDIWVMETQTKETTGTQYANVTVSGTGEVKEYEKTRFQSGSVSQRIKSKLRGIFSRGKQEETNTKPLAPNEK*
Ga0074045_105754392	3300010341	Bog Forest Soil	MNMQNMINETEAKQIALDYVKTKESGAQAEIKSVERQDMWVMETQTKEAKGIQYANLTVSGTGEVKDYTRTTFQSVSTPERITSKLRSIFSRNKQEEN*
Ga0074045_108079862	3300010341	Bog Forest Soil	MQRINETEAKQIALEYVKTKESGAQAEIKSVERQDTWLMETQTKETNGTQYANVTVSGTGQVKNYERTTFRSNSASQRIKSKLRNIFSRSKKEES*
Ga0136449_1000997507	3300010379	Peatlands Soil	MQNMINETEAKQIALEYVKTKESGAQAEIKSIERQDMWVMETETKESKGIQYAHLTVSGTGEVKDYTRTTFQSVSTSERVTSKLRGIFSRSKQEEN*
Ga0138602_1293122	3300011020	Peatlands Soil	MQKMIDETQAKQIALEFVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANITVSGTGEVRDYEKTRFQSGSVSQRITSKLRNIFSRGKQEETNTNPRAPNEK*
Ga0138583_10580181	3300011060	Peatlands Soil	MQKMIDETQAKQIALEFVKTKELGAQTEIKSAELQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIKSKLRSIFSRGKQEETNTKPLAPNEK*
Ga0138555_11415221	3300011075	Peatlands Soil	MQKMIDETQAKQIALEFVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIKSKLRSIFSRGKQEETNTKPLAPNEK*
Ga0138581_10812131	3300011085	Peatlands Soil	MQKMIDETQAKQIALEFVKTKELGAQTEIKSAERQDLWVMETQTKETNGTQYANITVSGTGEVRDYEKTRFQSGSVSQRITSKLRSIFSHGKQEETNTKPQAPNEK*
Ga0138576_11443392	3300011088	Peatlands Soil	MQKMIDETQAKQIALEFVKTKELGAQTEIKSTERQDIWVMETQSKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRITSKLRSIFSRGKHEETNTKPRALNEN*
Ga0138601_1101831	3300011108	Peatlands Soil	MQKMIDETQAKQIALEYVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIKSKLRSIFSRGKQEETNTKPLAPNEK*
Ga0138601_1209562	3300011108	Peatlands Soil	MNMQNMINETEAKQIALDYVKTKESGAQAEIKSVERQDMWVMETQTKEAKGIQYANLTVSGTGEVKDYARTTFQSVSTPQRITSKLRGIFSRNKQEEN*
Ga0153915_131950601	3300012931	Freshwater Wetlands	MNMQRMINETEAKQIALEYVETKESGAQTEIKSVERQDIWVMETQTKETKGIQYANVTVSGTGEVKDYKRTTFQSVSTPQRIKSKLRSIFSRSKQEES*
Ga0153916_125400321	3300012964	Freshwater Wetlands	MINETEAKQIAVEYVKKKESGAQAEIKSVEQMWVMETQSKETKGIQYANVTVSGTGDVKDYKRTTFQTFSASQRIKSKLRSIFSRSKQEES*
Ga0153916_132459011	3300012964	Freshwater Wetlands	MINETEAKQIALEYVKKTESGAQAEIKSVEHMWVMETQSKETKGFQYANVTVSGKGDVKDYKRTTFQSFSTSQRIKSKLRSIFSRSKQEES*
Ga0181539_10000198	3300014151	Bog	MQKMINETQAKQIAVEYVKTKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEATTTKQPPLAPIKE*
Ga0181539_100028360	3300014151	Bog	MQKMINENQAKQAALEYVKTKESGAQTEIKSVERQDIWVMETQTKETKGTQYANVTVSGTGEVKDYTKTRFQNDSVSQRIKSKLRNIFSRSKQEETNTKPLAPTRK*
Ga0181533_10299764	3300014152	Bog	MQRMINEAEAKQVALEYVRTRESGAHTQVKSVERQDIWVMETQTKETKGTQYANVTVSGTGEVKDYKRTTFTTRVSMPDKIKSKLRSIFSRSK*
Ga0181533_10569432	3300014152	Bog	MQKMINETQAKQVALEYVKTKESGAQTEIKSVERQDIWVMETQTKETNGTQYANVTVSGTGQIKDYEKTRFQSGSVSQRIKSKLRGLFSRNKQEETTTAPLAPTKE*
Ga0181527_10731682	3300014153	Bog	MINEAEAKQVALEYVRTRESGAHTQVKSVERQDIWVMETQTKETKGTQYANITVSGTGEVKDYKRTTFTTRVSMPDKIKSKLRSIFSRSK*
Ga0181527_11735472	3300014153	Bog	MQKMINETEAKQIALEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYEKTRFKTGISQRIKSKLQSIFSRNKQEEN*
Ga0181524_100665761	3300014155	Bog	MQRMINEAQAKQVALEYVRTRESGAHTQVKSVERQDIWVMETQTKETKGTQYANITVSGTGEVKDYKRTTFTTRVSMPEKIKSKLRSIFSRSK*
Ga0181524_103267651	3300014155	Bog	MQKMINETQAKQIAVEYVKAKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQE
Ga0181521_101677502	3300014158	Bog	MQKMINETQAKQIAVEYVKTKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQE
Ga0182021_101839841	3300014502	Fen	MQEIINETEAKQIALEYVKTKEPGAQTEIKSAERQNTWVMETQTKETNGTQYANVTLSETGEIKDYKKTKFKNISTPQKIKTKLRSIFT
Ga0187856_100053821	3300017925	Peatland	MQKMINETQAKQIAVEYVKAKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEEINTKPLAPIKE
Ga0187856_10905992	3300017925	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVEQQNIWVMGTQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKREES
Ga0187849_100058832	3300017929	Peatland	MPRTIDEAEAKKIALEYVKKEESGAQAEIKSVERQDIWVLEISWAMQTEKTKGTQYANVTVSGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS
Ga0187877_10829122	3300017931	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVEQQNIWVMETQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKQEES
Ga0187877_12383743	3300017931	Peatland	VNVSMPRTIDEAEAKKIALEYVKKEESGARAEIKSVERQDLWVLEVSWAMQTEKTKGTQYANVTVSGTGEVRDYEKTRFQSSSVSQRITSKLRSIFSRSKSGEQS
Ga0187854_101574683	3300017938	Peatland	EYVKKKESGVQAEVKSVERQDIWVLEVSWAMQTEKTKGTQYANVTISGTGEVRDYEKTRFQSSSVSQRITSKLRSIFSRSKSREQS
Ga0187853_104758191	3300017940	Peatland	MINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYEKTRFKTGISQRIKSKLQSIFSRNKQEE
Ga0187850_100201482	3300017941	Peatland	VNVSMPRTIDEAEAKKIALEYVKKEESGAQAEIKSVERQDIWVLEISWAMQTEKTKGTQYANVTVSGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS
Ga0187850_100622331	3300017941	Peatland	MNVSMPKTIDETEAKQIALEYVKKKESGVQAEVKSVERQDIWVLEVSWAMQTEKTKGTQYANVTISGTGEVRDYEKTRFQSGSVSQRITSKLRSIFSRTKPGHS
Ga0187850_101860432	3300017941	Peatland	MNVSMPRTIDEAEAKQIALGYVKQKESGVQAEIKSVERQDIWVLEISWPMQTEKTRGTQYANVTVSGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS
Ga0187850_103522602	3300017941	Peatland	MPRTIDEAEAKQIALECVKKKESGVQAEIKSVERQDIWVLEISWPMQTEKTKGTQYANVTISGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS
Ga0187870_11296322	3300017998	Peatland	MNVSMPRTIDEAEAKQIALGYVKQKESGVQAEIKSVERQDIWVLEISWPMQTEKTKGTQYANVTVSGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS
Ga0187870_12963771	3300017998	Peatland	MQRINETEAKEIALEYVKTKESGAQAEIKSVERQDMWVMETQTKETNGTQYANVTVSGTGEVKDYERTTFRSSSASQRIKSKLRNIFSRNKKEES
Ga0187865_10376721	3300018004	Peatland	MQRMINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYEKTRFKTGISQRIKSKLQSIFSRNKQEEN
Ga0187878_10604291	3300018005	Peatland	MNVSMPKTIDEAEAKQIALEYVKKKESDAQAEIQSVERQDLWVLEVSWAMQTEKTKGTQYANVTVSGTGEVRDYEKTRFQSSSVSQRITSKLRSIFSRSKSGEQS
Ga0187878_10778722	3300018005	Peatland	MNMQRTINETEAKQIALEYVKTKESGSQAEIKSVERQDMWVMETQTKEAKGIQYANITVSGTGAVEDYNRTTFQSFSTLRRIKSKLRSIFARD
Ga0187884_100835412	3300018009	Peatland	MQRMINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYKRTTFTTRVSMPDKIKSKLRSIFSRSK
Ga0187873_10978093	3300018013	Peatland	MNVSMPKTIDEAEAKQIALEYVKKKESDAQAEIQSVERQDLWVLEVSWAMQTEKTKGTQYPNVTVSGTGEVRDYEKTRFQSSSVSQRITSKLRSIFSRSKSREQS
Ga0187866_10568391	3300018015	Peatland	MTLSMPRTIDEAEAKQIALEYVKKKESGVQPEIKSVERQDIWELEVSWAMQTEKTKGTQYANVTVSGTGEVKDYEKTRFQSGSVSQRITSKLRNIFSRNKPAEKS
Ga0187866_11560201	3300018015	Peatland	KESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEEINTKPLAPIKE
Ga0187886_10242821	3300018018	Peatland	LEYVKKKESGVQAEVKSVEWQDIWVLEVSWAMQTEKTKGTQYANVTISGTGEVRDYEKTRFQSGSVSQRITSKLRSIFSRTKPGHS
Ga0187874_101699612	3300018019	Peatland	NETEAKQIALEYVKKQESGAQAEIKSVEQQNIWIMETQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKQEES
Ga0187874_103088481	3300018019	Peatland	MQKMIDETQAKQIALEYVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRIKSKLRNIFSRGKQEETNTNPRAPNEK
Ga0187882_12512101	3300018021	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVEQQNIWVMETQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKQEE
Ga0187864_102074372	3300018022	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVEQQNIWVMETQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVSQRITSKLRSIFSRNKSGEKS
Ga0187889_100940242	3300018023	Peatland	MQKMIDETQAKQIALEYVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRITSKLRSIFSHGKQEETNTKPQAPNEK
Ga0187881_100545361	3300018024	Peatland	MQKMINETQAKQIAVEYVKAKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEEINTK
Ga0187881_101950202	3300018024	Peatland	MQRMINETEAKQIVLEYVKTRESGAQPEIKSVERQNMWVMETQTKETKGTQYANVTVSGTGEVKDYKRTTFTTRVSMPEKIKSKLRSIFSRSK
Ga0187857_101501142	3300018026	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVEQQNIWIMETQTKETKGTQYASITVSGTGQVKHYEKTRFQSGSVQRIKSKLRSIFSRGKQEES
Ga0187857_101567461	3300018026	Peatland	MQKMIDETQAKQIALEFVKTKELGAQTEIKSAERQDIWVMETQTKETNGTQYANVTVSGTGEVRDYEKTRFQSGSVSQRITSKLRSIFSHGKQEETNTKPQAPNEK
Ga0187869_101346073	3300018030	Peatland	MQKMINETQAKQIAVEYVKAKESGSQTEVKSVERQDIWVMETQTKETNGSQYANATVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEEN
Ga0213850_14390911	3300021856	Watersheds	MQNMINETEAKQIALEYVKTKESGAHAEIKSVERQDMWVMQTQTNETKGIQYANVTVSGTGEVKDYKRTTFESVSTPQKIKSKLRSIFSRNKQEEN
Ga0079039_13672061	3300022185	Freshwater Wetlands	MQRMINETEAKQIAQEYVKTKESGAQVEIKSVERQDVWIMETQTKEKKGIQYANVTVSGTGEAKDYKRTTFQSVSTPQRIKSKLRNIFSRSKQEES
Ga0208821_10100004	3300025432	Peatland	MQKMINETQAKQIAVEYVKTKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRITSKLRSIFSRNKQEEINTKPLAPIKE
Ga0208323_10610331	3300025439	Peatland	MQKMINETEAKQIALEYVKKQESGAQAEIKSVERQDIWVLEISWAMQTEKTKGTQYANVTVSGTGEVRDYKKTRFQSGSVSQRILSKVRDIFSRSKPGEKS
Ga0209517_1000812512	3300027854	Peatlands Soil	VYGTFRYEGMNMQNMINETEAKQIALDYVKTKESGAQAEIKSVERQDMWVMETQTKEAKGIQYANLTVSGTGEVKDYARTTFQSVSTPQRITSKLRGIFSRNKQEEN
Ga0209517_100820982	3300027854	Peatlands Soil	MINETEAKQIALEYVKTKESGAQAEIKSIERQDMWVMETETKESKGIQYAHLTVSGTGEVKDYTRTTFQSVSTSERVTSKLRGIFSRSKQEEN
Ga0209777_101511404	3300027896	Freshwater Lake Sediment	MNVSMPKTIDEAEAKQIALEYVKKKESDAQAEIQSVERQDIWVLEVSWAMQTEKTKGTQYANVTVSGTGEVRDYEKTRFQSSSVSQRITSKLRSIFSRSKSGEQS
Ga0209415_102832292	3300027905	Peatlands Soil	MQNMINETEAKQIALDYVKTKESGAQAEIKSVERQDMWVMETQTKEAKGIQYANLTVSGTGEVKDYARTTFQSVSTPQRITSKLRGIFSRNKQEEN
Ga0311301_102012381	3300032160	Peatlands Soil	MQNMINETEAKQIALEYVKTKESGAQAEIKSIERQDMWVMETETKESKGIQYAHLTVSGTGEVKDYTRTTFQSVSTSERVTSKLRGIFSRSKQEEN
Ga0326728_1000279414	3300033402	Peat Soil	MQKMISETQAKQIALEYVKTKESGGKTEVKSVERQDIWVMETQTKETNGTQYANVTVSGKGEVKDYTKTRFQSGSVSQRILSKVRSIFSRGKHEETNTKPLAPTKE
Ga0326728_100379826	3300033402	Peat Soil	MINESQAKQIAVEYVRTRDSGSQTEVKSVERQDIWVMQTQTRETNGTQYANVTVSGTGEVKDYTKTRFQSGSVTQRITSKLRSIFSRNKQEETTTKPLAPIKE
Ga0326728_100549894	3300033402	Peat Soil	MQNMINETEAKQIALEYVKTKESGAQAEIKSIERQDMWVMETQTKESKGIQYANLTVSGRGEVKDYTRTTFQSVSTPERITSKLRGIFSRNKQEEN
Ga0326728_100585717	3300033402	Peat Soil	MEKMISETEAKQIALEYVKKQESGAQAEIKSVERQNVWVMETQTKETKGTQYADVTVSGTGEVKDYKKTRFESGSVSQRIASKLRGIFGRGK
Ga0326728_102012092	3300033402	Peat Soil	MINETQAKQVALEYVKTKESGAQTEIKSVERQDIWVMETQTKETNGTQYANVTVSGTGQVKDYEKTRFQSGSVSQRIKSKLRGIFSRNKQEEITTTPPASTKE
Ga0326727_100922324	3300033405	Peat Soil	MQRMVNETEAKQIALDYVKKQESGAPAEIKSVERQNVWVMETQTKETKGTQYANVTVSGTGEVKDYKKTRFQSGSVSQRIGSKLRGIFRRGKQEEN
Ga0326727_102386003	3300033405	Peat Soil	MQNMINETEAKQIALEYVKTKESGAVAEIKSIERQDMWVMETQTKESKGIQYANLTVSGRGEVKDYTRTTFQSVSTPERITSKLRGIFSRNKQEEN
Ga0326727_102395322	3300033405	Peat Soil	MQKMITESQAKQIAAEYVKAKESGLQTEVKSVERQDIWLMETQTKEANGSQYANVTVSGTGEVKDYTKTRFQSGSVSQRILSKVRNIFSRNKQEEINTKPLAPIKVNEKEAKQE
Ga0326727_106166821	3300033405	Peat Soil	MQKMINENQAKQAALEYVKTKESGAQTEIKSVERQDIWVMETQTKETKGTQYANVTVSGTGEVKDYTKTRFQNDSVSQRIKSKLRNIFSRSKQEETNTKPLAPTRK
Ga0326727_107208281	3300033405	Peat Soil	EEIIMQNMINETEAKQIALEYVKTKESGAQAEIKSIERQDMWVMETQTKESKGIQYANLTVSGTGEVKDYTRTTFQSVSTPERITSKLRGIFSRNKQEEN
Ga0326727_108992741	3300033405	Peat Soil	MQKMVSETEAKQIALDYVQKQDSGAPAEISSVERQNVWVMETRTKETNGTQFANVTVSGIGEVKDYRKTRFQSGSVSQRIKSKLHGIFSRGK
Ga0326727_109161892	3300033405	Peat Soil	MQKMINETQAKQVALEYVKTKELGAQTEIKSVERQDIWVMETQTKETNGTQYANVTVSGTGQVKDYEKTRFQSGSVSQRIKSKLRGIFSRNKQEETTTTPLAPTKE
Ga0326724_0189762_421_741	3300034091	Peat Soil	MQKMINETQAKQVALEYVKTKESGAQTEIKSVERQDIWVMETQTKETNGTQYANVTVSGTGQVKDYEKTRFQSGSVSQRIKSKLRGIFSRNKQEEITTTPPASTKE
Ga0326724_0364897_328_624	3300034091	Peat Soil	MSMQRMVNETEAKQIALDYVKKQESGAPAEIKSVERQNVWVMETQTKETKGTQYANVTVSGTGEVKDYKKTRFQSGSVSQRIGSKLRGIFRRGKQEEN
Ga0326724_0383732_39_383	3300034091	Peat Soil	MQKMINETQAKQIAVEYVTAKESGSQTEVKSVERQDIWVMETQTKETNGSQYANVTVSGTGEVKDYMKTRFQSGSVSQRITSKLRSIFSRNKQEEINTKPLAPIKVNEKEAKQE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086488

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences