Metagenome Family F086419

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086419
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	57 residues
Representative Sequence	TAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPRERKPRKRVPSPASS
Number of Associated Samples	68
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	90.91 %
% of genes from short scaffolds (< 2000 bps)	84.55 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (74.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.091 % of family members)
Environment Ontology (ENVO)	Unclassified (92.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (59.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.14% β-sheet: 0.00% Coil/Unstructured: 91.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00589	Phage_integrase	60.00
PF05869	Dam	8.18
PF05988	DUF899	4.55
PF00239	Resolvase	2.73
PF13180	PDZ_2	0.91
PF10908	DUF2778	0.91
PF13384	HTH_23	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	4.55
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.73
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.55 %
Unclassified	root	N/A	25.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.55 %
Unclassified	root	N/A	25.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.55 %
Unclassified	root	N/A	25.45 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.18 %
Unclassified	root	N/A	25.45 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.18 %
Unclassified	root	N/A	25.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.64 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	22.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.64 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	20.91 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	20.91 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	3.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	20.91 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	3.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_108761410	Not Available	502	Open in IMG/M
3300005444\|Ga0070694_101828456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	518	Open in IMG/M
3300005467\|Ga0070706_101484967	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005764\|Ga0066903_108805742	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010358\|Ga0126370_12004608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	566	Open in IMG/M
3300012199\|Ga0137383_10903196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	645	Open in IMG/M
3300016270\|Ga0182036_10363782	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300016270\|Ga0182036_11814472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	516	Open in IMG/M
3300016270\|Ga0182036_11835223	Not Available	513	Open in IMG/M
3300016319\|Ga0182033_11212956	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300016341\|Ga0182035_11164868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	687	Open in IMG/M
3300016357\|Ga0182032_11632954	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300016371\|Ga0182034_11128584	Not Available	680	Open in IMG/M
3300016387\|Ga0182040_11226317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300016422\|Ga0182039_10920558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	781	Open in IMG/M
3300016422\|Ga0182039_10930912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300021560\|Ga0126371_13277586	Not Available	547	Open in IMG/M
3300031543\|Ga0318516_10304790	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031544\|Ga0318534_10123074	All Organisms → cellular organisms → Bacteria → Proteobacteria	1491	Open in IMG/M
3300031545\|Ga0318541_10175969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1180	Open in IMG/M
3300031564\|Ga0318573_10030311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2526	Open in IMG/M
3300031572\|Ga0318515_10060383	All Organisms → cellular organisms → Bacteria → Proteobacteria	1928	Open in IMG/M
3300031572\|Ga0318515_10499081	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031572\|Ga0318515_10737871	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031573\|Ga0310915_10280913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300031573\|Ga0310915_10635329	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300031573\|Ga0310915_11071856	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031668\|Ga0318542_10225294	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300031679\|Ga0318561_10685625	Not Available	563	Open in IMG/M
3300031680\|Ga0318574_10437184	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031680\|Ga0318574_10810916	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031681\|Ga0318572_10736779	Not Available	587	Open in IMG/M
3300031713\|Ga0318496_10249461	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300031713\|Ga0318496_10266215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	945	Open in IMG/M
3300031713\|Ga0318496_10400641	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031719\|Ga0306917_10269220	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300031719\|Ga0306917_10393988	Not Available	1080	Open in IMG/M
3300031719\|Ga0306917_11399544	Not Available	539	Open in IMG/M
3300031736\|Ga0318501_10565919	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300031736\|Ga0318501_10851634	Not Available	506	Open in IMG/M
3300031747\|Ga0318502_10074577	All Organisms → cellular organisms → Bacteria → Proteobacteria	1837	Open in IMG/M
3300031747\|Ga0318502_10768433	Not Available	583	Open in IMG/M
3300031763\|Ga0318537_10013613	All Organisms → cellular organisms → Bacteria → Proteobacteria	2768	Open in IMG/M
3300031763\|Ga0318537_10147625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	875	Open in IMG/M
3300031764\|Ga0318535_10284289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300031771\|Ga0318546_10089579	All Organisms → cellular organisms → Bacteria → Proteobacteria	2000	Open in IMG/M
3300031779\|Ga0318566_10133366	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300031781\|Ga0318547_10896163	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031781\|Ga0318547_11001031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	522	Open in IMG/M
3300031792\|Ga0318529_10614055	Not Available	504	Open in IMG/M
3300031796\|Ga0318576_10114833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1238	Open in IMG/M
3300031819\|Ga0318568_10134689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1502	Open in IMG/M
3300031846\|Ga0318512_10315747	Not Available	778	Open in IMG/M
3300031846\|Ga0318512_10724838	Not Available	510	Open in IMG/M
3300031860\|Ga0318495_10523478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	516	Open in IMG/M
3300031879\|Ga0306919_10366815	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300031879\|Ga0306919_10701333	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031879\|Ga0306919_10860592	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031879\|Ga0306919_11521204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	503	Open in IMG/M
3300031890\|Ga0306925_10098386	All Organisms → cellular organisms → Bacteria → Proteobacteria	3111	Open in IMG/M
3300031890\|Ga0306925_10346476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1595	Open in IMG/M
3300031890\|Ga0306925_10596756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1166	Open in IMG/M
3300031890\|Ga0306925_10714219	Not Available	1047	Open in IMG/M
3300031893\|Ga0318536_10127308	All Organisms → cellular organisms → Bacteria → Proteobacteria	1288	Open in IMG/M
3300031896\|Ga0318551_10118710	All Organisms → cellular organisms → Bacteria → Proteobacteria	1422	Open in IMG/M
3300031897\|Ga0318520_10512262	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031910\|Ga0306923_10854382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1000	Open in IMG/M
3300031910\|Ga0306923_11250463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	790	Open in IMG/M
3300031910\|Ga0306923_11263199	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300031910\|Ga0306923_11993348	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031910\|Ga0306923_12218582	Not Available	550	Open in IMG/M
3300031912\|Ga0306921_10693781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1170	Open in IMG/M
3300031941\|Ga0310912_10139447	All Organisms → cellular organisms → Bacteria → Proteobacteria	1821	Open in IMG/M
3300031946\|Ga0310910_10512161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	952	Open in IMG/M
3300031947\|Ga0310909_11149035	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031947\|Ga0310909_11237457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	602	Open in IMG/M
3300032001\|Ga0306922_11602868	Not Available	647	Open in IMG/M
3300032001\|Ga0306922_12303933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	516	Open in IMG/M
3300032025\|Ga0318507_10468601	Not Available	548	Open in IMG/M
3300032035\|Ga0310911_10035515	All Organisms → cellular organisms → Bacteria → Proteobacteria	2517	Open in IMG/M
3300032035\|Ga0310911_10508236	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300032041\|Ga0318549_10493947	Not Available	550	Open in IMG/M
3300032042\|Ga0318545_10057928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300032042\|Ga0318545_10335159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	544	Open in IMG/M
3300032044\|Ga0318558_10166585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	1066	Open in IMG/M
3300032055\|Ga0318575_10097713	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300032059\|Ga0318533_10496510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	894	Open in IMG/M
3300032059\|Ga0318533_10800935	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300032059\|Ga0318533_11222972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	549	Open in IMG/M
3300032060\|Ga0318505_10015615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2856	Open in IMG/M
3300032063\|Ga0318504_10108025	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300032068\|Ga0318553_10176430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1111	Open in IMG/M
3300032076\|Ga0306924_10163649	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2550	Open in IMG/M
3300032094\|Ga0318540_10190529	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300032261\|Ga0306920_101871803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	844	Open in IMG/M
3300032261\|Ga0306920_102560654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300032261\|Ga0306920_104199405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	519	Open in IMG/M
3300033289\|Ga0310914_11092540	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300033289\|Ga0310914_11364636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	611	Open in IMG/M
3300033290\|Ga0318519_10354231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.45%
Loam	Environmental → Terrestrial → Soil → Loam	4.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	92.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	59.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1087614102	3300005332	Tropical Forest Soil	EPAALPAPNRPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKMPSPASA*
Ga0070694_1018284561	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GSAAPAALPAPEAQSSEEALEAKPKRKTNRLMMEADTAIGPRERKPRKVPSPAST*
Ga0070706_1014849671	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KVIEGTAEPAALPAPNRPSPEAALEATLEPTKRKPNRLMMEPDTAIGPRERKPRKRVPSPASA*
Ga0066903_1088057421	3300005764	Tropical Forest Soil	EAAKVIEGTAAPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT*
Ga0126370_120046081	3300010358	Tropical Forest Soil	AGEAAEVIEGTAEPAALPAPNGPSPEAALEAMLEPTKRKPNRLMMEADTAIGPRVRKMRKGLPRT*
Ga0137383_109031962	3300012199	Vadose Zone Soil	KVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPREHKTRKCLPRT
Ga0182036_103637822	3300016270	Soil	EGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPAS
Ga0182036_116094332	3300016270	Soil	EAAKVIEGTAEPAALPAPNGQSSEAALEPASLPKSKHKPNRLMLEADTEVGPSERKPGKGRVPSPSGT
Ga0182036_118144721	3300016270	Soil	EPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRERKPRKVPSPPDG
Ga0182036_118352231	3300016270	Soil	PNGPSPEAAPEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKMPSPASA
Ga0182033_112129561	3300016319	Soil	VIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0182035_111648681	3300016341	Soil	AGEAAKVIEGTAAALPASNGPPPEAALEANLEPTKRKPNQLMMEGDTAIGPRERKPRKREGREDE
Ga0182032_116329542	3300016357	Soil	PSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0182034_111285842	3300016371	Soil	EAAKVIEGTAEPAALPAPNGPSPEAALETALKPTKRKPNRLMMQADTAIGPRERKTRKRLART
Ga0182040_112263171	3300016387	Soil	PNGPSPEAAPEATLEPTKRKPNRLMMEADTAVGPKERKPRKRVPSPAST
Ga0182037_121461591	3300016404	Soil	APDGPSPEAALEATLEPSKRKPSRLMMEVDTAIGPRERKPRKRVPSPASS
Ga0182039_109205582	3300016422	Soil	AALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0182039_109309123	3300016422	Soil	EGTAEPAALPVPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPQERKRRKRVPSPASS
Ga0126371_132775862	3300021560	Tropical Forest Soil	IEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPRVRKTRKGLPRA
Ga0209799_10671941	3300027654	Tropical Forest Soil	ADEAAKVIEGTAEPAALPAPNGQSSEAALEPAPLPKSKHKPNRLMLEADNAVGPRERMPRKVRPPPGS
Ga0318516_103047901	3300031543	Soil	KVIEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318534_101230745	3300031544	Soil	TAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318541_101759691	3300031545	Soil	PSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0318573_100303111	3300031564	Soil	AEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318515_100603834	3300031572	Soil	EPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318515_104990812	3300031572	Soil	APNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0318515_107378711	3300031572	Soil	AALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0310915_102809134	3300031573	Soil	AEPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0310915_106353291	3300031573	Soil	AKVIEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0310915_110718561	3300031573	Soil	EAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0318542_102252943	3300031668	Soil	PEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318561_106856251	3300031679	Soil	VIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318574_104371841	3300031680	Soil	TAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPRERKPRKRVPSPASS
Ga0318574_108109162	3300031680	Soil	AALPTPNGPSPEAAPEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKMPSPASA
Ga0318572_107367791	3300031681	Soil	PAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318496_102494612	3300031713	Soil	RRSLPRSRLPNGPSPEAALEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318496_102662152	3300031713	Soil	AEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAVGPKERKTRKGLPRT
Ga0318496_104006411	3300031713	Soil	PAALPAPNGPSPEAALEATLEPIKRKPNRLMMEADTAVGPKERKPKKRVPSPPSA
Ga0306917_102692201	3300031719	Soil	EGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPAS
Ga0306917_103939882	3300031719	Soil	AHLVEMKAEPAALPAPGGQSPEKLSSKRKPNRLVMEADTAIGPRVRKTRKGLPRT
Ga0306917_113995441	3300031719	Soil	NGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0306917_114142901	3300031719	Soil	VPNGPSPEDALEATLEPPKRKPNRLMMEVDTAIGPQERKPRTRVPSPAST
Ga0318501_105659191	3300031736	Soil	LAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0318501_108516341	3300031736	Soil	LPRSRLPNGPSPEAALEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318502_100745774	3300031747	Soil	IEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318502_105806641	3300031747	Soil	NGPSPEAAPEATLEPSKRKPNRLMMEVDTAIGPQERKPRKRVPSPAST
Ga0318502_107684331	3300031747	Soil	HLVEMKAEPAALPAPGGQSPEKLSSKRKPNRLMMEADTAVGPKERKTRKGLPRT
Ga0318492_102935811	3300031748	Soil	AAKVIEGTAEPAALPAPNGQSSEAALEPAPLPKSKHKPNRLMLEADTEVGPTERKPRKGKVPSPAGT
Ga0318537_100136135	3300031763	Soil	TAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318537_101476252	3300031763	Soil	EAAKVIEGTAEPAALPAPNGPSPEAALEATLEPIKRKPNRLMMEADTAVGPKERKPKKRVPSPPSA
Ga0318535_102842892	3300031764	Soil	PAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0318546_100895791	3300031771	Soil	NGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318566_101333661	3300031779	Soil	VIEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318547_108961632	3300031781	Soil	PAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPRERKPRKRVPSPASS
Ga0318547_110010311	3300031781	Soil	IEGTAEPAALPAPNGPSPEAALETTLKPTKRKPNRLMMQADTAIGPRERKTRKRLART
Ga0318529_106140552	3300031792	Soil	KVIEGTAEPAALPVPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPRERKPSKHLPRT
Ga0318576_101148334	3300031796	Soil	VIEGTAEPAALPAPNEPSPEAVLEATLEPTKRNPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318568_101346895	3300031819	Soil	IEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318512_103157471	3300031846	Soil	PAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318512_107248381	3300031846	Soil	NGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKMPSPASA
Ga0318495_105234783	3300031860	Soil	LEQRAGEAAKVIEGTAAALPASNGPPPEAALEANLEPTKRKPNQLMMEGDTAIGPRERKPRKREGREDE
Ga0306919_103668151	3300031879	Soil	QAGEEAKVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPREHRTRKGLPRT
Ga0306919_107013331	3300031879	Soil	GTAEPAALPVPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPQERKRRKRVPSPASS
Ga0306919_108605921	3300031879	Soil	EGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAVGPKERKTRKGLPRT
Ga0306919_115212041	3300031879	Soil	AKVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPRERKPRKRVPSPASS
Ga0306925_100983868	3300031890	Soil	ALPVPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0306925_103464763	3300031890	Soil	EGTAEPAALPTPNGPSPEAAPEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKMPSPAS
Ga0306925_105967563	3300031890	Soil	VIEGTAEPAALPVPNGPSPEAALEATLAPTKRKPNRLMMEADTAIGPRERKPSKHLPRT
Ga0306925_107142193	3300031890	Soil	AKVIEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRVRKTRKGLPR
Ga0318536_101273084	3300031893	Soil	GEAAKVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318551_101187105	3300031896	Soil	AAKVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318520_105122622	3300031897	Soil	ARAGEAAKVIEGTAEPAALPAPNGPSPEAAPEATLVPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0306923_108543821	3300031910	Soil	AKVIEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRERKPRKVPSPPDG
Ga0306923_112504632	3300031910	Soil	ALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0306923_112631991	3300031910	Soil	EGTAEPAALPTPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPPERKPRQRVPSPAST
Ga0306923_119933482	3300031910	Soil	KVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPRERKPRKRVPSPASS
Ga0306923_122185822	3300031910	Soil	TAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMIEADTAVGPREHKTRKCLPRT
Ga0306921_106937813	3300031912	Soil	VIEGEAEVVPSLSAPNEPSPEAALETTLEPTKRKPNRLMMEVDTAIGPQERKTRKRVPSPAST
Ga0310912_101394473	3300031941	Soil	AALPVPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0310910_105121612	3300031946	Soil	AKVIEGTAEPAALPVPNGPSPEAALEATLAPTKRKPNRLMMEADTAIGPRERKPSKHLPR
Ga0310909_111490352	3300031947	Soil	AIPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0310909_112374571	3300031947	Soil	TAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRERKPRKVPSPPDG
Ga0306922_116028681	3300032001	Soil	AEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPRERKPRKRVPSPASS
Ga0306922_123039332	3300032001	Soil	TEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAST
Ga0318507_104686011	3300032025	Soil	APNGPAPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0310911_100355151	3300032035	Soil	GTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0310911_105082362	3300032035	Soil	IEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAVGPKERKTRKGLPRT
Ga0318549_104939471	3300032041	Soil	IEGTAELAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0318545_100579285	3300032042	Soil	EPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318545_103351592	3300032042	Soil	AQLVEMKAEPAALPAPDGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRVPSPASI
Ga0318558_101665853	3300032044	Soil	EGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPREHRTRKGLPRT
Ga0318532_102604361	3300032051	Soil	AEVIEGTAEPAALPAPNGQSSEAALEPVPLPKSKHKPNRLMLEADTEVGPSERKPGKGRVPSPPGA
Ga0318575_100977135	3300032055	Soil	EAAKVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318533_104965102	3300032059	Soil	EPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAVGPKERKPRQRKIPSPASA
Ga0318533_108009352	3300032059	Soil	APNGPSPEAALEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0318533_110093711	3300032059	Soil	KVIEGTAEPAALPAPNGPSPEAALEATLEPTKRKPNRLIMEADTAVGPKERKPRKRVPSPAST
Ga0318533_112229722	3300032059	Soil	AGEAAKVIEGTAEPAALPVPNGPSPEAALKAMSEPTKRKPNRLMMEADTAIGPREHKTRKCLPRT
Ga0318505_100156154	3300032060	Soil	PAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRERKPRKVPSPPDG
Ga0318504_101080251	3300032063	Soil	LAARAGEAAKVIEGTAEPAALPAPNEPSPEAVLEATLEPTKRNPNRLMTEADTAIGPREHKTRKCLPRT
Ga0318504_105338442	3300032063	Soil	KVIEGTAEPAALPAPNGQSSEAALEPAPLPKSKHKPNRLMLEADTEVGPTERKPRKGKVPSPAGT
Ga0318553_101764301	3300032068	Soil	EGTAEPASLPAPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPRVRKTRKGLPRT
Ga0306924_101636491	3300032076	Soil	EGTAEPAALPVPNGPSPEAALEATLEPTKRKPNRLMMEADTAIGPRERKPSKHLPRT
Ga0306924_115086572	3300032076	Soil	VPNGPSPEDALEATLEPPKRKPNRLMMEVDTAIGPQERKPRKRVPSPAGT
Ga0318540_101905291	3300032094	Soil	SPEAAPEATLEPTKRKPNRLMMDADTAVGPKERKPRQRKMPSPASA
Ga0306920_1018718032	3300032261	Soil	AKVIEGSVEPAALPAPNGPSPEAALEATLEPTKRKPNRLMMEVDTAIGPQERKPRKRKIPSPASA
Ga0306920_1025606541	3300032261	Soil	NGPSPEAALEATLEPTKRKPNRLIMEADTAVGPKERKPRKRVPSPAST
Ga0306920_1041994051	3300032261	Soil	PAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRERKPRKVPSPPDG
Ga0310914_110925401	3300033289	Soil	IEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRVRKTRKGLPRT
Ga0310914_113646361	3300033289	Soil	IEGTAEPAALPAPNGPSPEAAPEATLEPTKRKPNRLMMEADTAIGPRERKPRKVPSPPDG
Ga0318519_103542311	3300033290	Soil	IEVTAEPAALPAPNGPSPEAALEATLQPTKRKPNRLMMEVDTAIGPHERKPRKRVPSPAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086419

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences