Metagenome / Metatranscriptome Family F086316

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086316
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	49 residues
Representative Sequence	MALNAALKQLIETKLAHTREPQWALPIAEVRQAFRNLWTPAI
Number of Associated Samples	96
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.93 %
% of genes near scaffold ends (potentially truncated)	93.69 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (15.315 % of family members)
Environment Ontology (ENVO)	Unclassified (27.928 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.342 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.57% β-sheet: 0.00% Coil/Unstructured: 61.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00144	Beta-lactamase	7.21
PF03741	TerC	4.50
PF08386	Abhydrolase_4	3.60
PF02739	5_3_exonuc_N	3.60
PF03401	TctC	2.70
PF01557	FAA_hydrolase	2.70
PF04909	Amidohydro_2	1.80
PF08241	Methyltransf_11	1.80
PF03328	HpcH_HpaI	1.80
PF00005	ABC_tran	1.80
PF00378	ECH_1	1.80
PF13360	PQQ_2	1.80
PF07859	Abhydrolase_3	1.80
PF11158	DUF2938	1.80
PF06725	3D	1.80
PF04397	LytTR	0.90
PF05292	MCD	0.90
PF00857	Isochorismatase	0.90
PF02518	HATPase_c	0.90
PF00069	Pkinase	0.90
PF13649	Methyltransf_25	0.90
PF12836	HHH_3	0.90
PF01053	Cys_Met_Meta_PP	0.90
PF07589	PEP-CTERM	0.90
PF00593	TonB_dep_Rec	0.90
PF01638	HxlR	0.90
PF01011	PQQ	0.90
PF00528	BPD_transp_1	0.90
PF00355	Rieske	0.90
PF12706	Lactamase_B_2	0.90
PF00027	cNMP_binding	0.90
PF01575	MaoC_dehydratas	0.90
PF06983	3-dmu-9_3-mt	0.90
PF04392	ABC_sub_bind	0.90
PF13561	adh_short_C2	0.90
PF00582	Usp	0.90
PF00106	adh_short	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2367	Beta-lactamase class A	Defense mechanisms [V]	7.21
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	7.21
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	7.21
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	4.50
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	3.60
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.70
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.80
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.80
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.80
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.80
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.90
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.90
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.90
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.90
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.90
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.90
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.90
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.90
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.90
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.90
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.90
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.90
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.90
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.90
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.14 %
Unclassified	root	N/A	18.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.80 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	20.72 %
Unclassified	root	N/A	18.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9.01 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	4.50 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.80 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.80 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	0.90 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	2.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1.80 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.80 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.80 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.90 %
Luteimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas	0.90 %
Noviherbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum	0.90 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	2.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.80 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1.80 %
Noviherbaspirillum pedocola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum pedocola	0.90 %
Paraburkholderia domus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia domus	0.90 %
unclassified Luteimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → unclassified Luteimonas	0.90 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.90 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
unclassified Massilia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia	2.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	1.80 %
Hyalangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium	1.80 %
Luteimonas sp. LNNU 24178	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → unclassified Luteimonas → Luteimonas sp. LNNU 24178	0.90 %
Noviherbaspirillum pedocola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum pedocola	0.90 %
Paraburkholderia domus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia domus	0.90 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.90 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Massilia sp. H6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. H6	2.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Arthrobacter sp. E3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. E3	1.80 %
Hyalangium minutum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	1.80 %
Luteimonas sp. LNNU 24178	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → unclassified Luteimonas → Luteimonas sp. LNNU 24178	0.90 %
Noviherbaspirillum pedocola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum pedocola	0.90 %
Paraburkholderia domus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia domus	0.90 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.90 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_12074577	Not Available	679	Open in IMG/M
3300000559\|F14TC_103084540	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300000559\|F14TC_108282388	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300000956\|JGI10216J12902_110950560	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300001431\|F14TB_104033235	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005178\|Ga0066688_10179245	All Organisms → cellular organisms → Bacteria → Proteobacteria	1338	Open in IMG/M
3300005178\|Ga0066688_10748339	Not Available	616	Open in IMG/M
3300005294\|Ga0065705_10814973	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005330\|Ga0070690_101473638	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005332\|Ga0066388_102272207	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005332\|Ga0066388_107682932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	540	Open in IMG/M
3300005332\|Ga0066388_108160838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	523	Open in IMG/M
3300005338\|Ga0068868_101656409	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005340\|Ga0070689_100874802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. E3	794	Open in IMG/M
3300005447\|Ga0066689_10968793	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005466\|Ga0070685_10023006	All Organisms → cellular organisms → Bacteria → Proteobacteria	3406	Open in IMG/M
3300005578\|Ga0068854_102118405	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005764\|Ga0066903_105381582	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005843\|Ga0068860_101216989	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005937\|Ga0081455_10991220	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300006041\|Ga0075023_100376887	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300006575\|Ga0074053_10700784	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300007076\|Ga0075435_101193861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	666	Open in IMG/M
3300007076\|Ga0075435_101869963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	527	Open in IMG/M
3300009011\|Ga0105251_10261753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. E3	780	Open in IMG/M
3300009100\|Ga0075418_12500659	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009146\|Ga0105091_10092208	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300009157\|Ga0105092_10021694	All Organisms → cellular organisms → Bacteria → Proteobacteria	3379	Open in IMG/M
3300009177\|Ga0105248_12061247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	648	Open in IMG/M
3300009177\|Ga0105248_13230057	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300009792\|Ga0126374_10155403	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300010043\|Ga0126380_10503189	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300010046\|Ga0126384_10420751	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300010048\|Ga0126373_12991093	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010360\|Ga0126372_11385672	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300010361\|Ga0126378_10284681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1753	Open in IMG/M
3300010366\|Ga0126379_12223845	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300010366\|Ga0126379_12500486	Not Available	615	Open in IMG/M
3300010376\|Ga0126381_100694471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia domus	1455	Open in IMG/M
3300010376\|Ga0126381_105157248	Not Available	500	Open in IMG/M
3300012924\|Ga0137413_11264078	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012930\|Ga0137407_11514809	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300012951\|Ga0164300_10329142	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012988\|Ga0164306_11265128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → unclassified Luteimonas → Luteimonas sp. LNNU 24178	622	Open in IMG/M
3300013308\|Ga0157375_12404823	Not Available	629	Open in IMG/M
3300014326\|Ga0157380_12116494	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	626	Open in IMG/M
3300014884\|Ga0180104_1240246	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300015371\|Ga0132258_10040398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10577	Open in IMG/M
3300015372\|Ga0132256_101288409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	843	Open in IMG/M
3300016294\|Ga0182041_11101696	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300016404\|Ga0182037_12028316	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300017695\|Ga0180121_10069729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum pedocola	1249	Open in IMG/M
3300017959\|Ga0187779_10045773	All Organisms → cellular organisms → Bacteria → Proteobacteria	2545	Open in IMG/M
3300017959\|Ga0187779_10468317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	830	Open in IMG/M
3300018028\|Ga0184608_10358054	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300018431\|Ga0066655_11236486	Not Available	532	Open in IMG/M
3300025908\|Ga0207643_10202540	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300025918\|Ga0207662_10278686	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300025925\|Ga0207650_10113070	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300025925\|Ga0207650_11039623	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300025960\|Ga0207651_10666449	Not Available	914	Open in IMG/M
3300025986\|Ga0207658_10018452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4818	Open in IMG/M
3300026095\|Ga0207676_10060627	All Organisms → cellular organisms → Bacteria	2993	Open in IMG/M
3300027874\|Ga0209465_10672626	Not Available	509	Open in IMG/M
3300027910\|Ga0209583_10282646	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300027915\|Ga0209069_10296375	Not Available	857	Open in IMG/M
3300028380\|Ga0268265_10077089	All Organisms → cellular organisms → Bacteria → Proteobacteria	2617	Open in IMG/M
3300028732\|Ga0302264_1084679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. H6	750	Open in IMG/M
3300028736\|Ga0302214_1082983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. H6	670	Open in IMG/M
3300028741\|Ga0302256_10071399	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300029923\|Ga0311347_10978844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300030000\|Ga0311337_11155873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300030002\|Ga0311350_10217579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1700	Open in IMG/M
3300030002\|Ga0311350_11614537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300030014\|Ga0302175_10070994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300030294\|Ga0311349_10443360	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300030491\|Ga0302211_10039024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1354	Open in IMG/M
3300030838\|Ga0311335_10539571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	812	Open in IMG/M
3300030838\|Ga0311335_10932978	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300030838\|Ga0311335_11135328	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300030943\|Ga0311366_10388493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1213	Open in IMG/M
3300031170\|Ga0307498_10464976	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031232\|Ga0302323_102428776	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031366\|Ga0307506_10507923	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031719\|Ga0306917_11099188	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031720\|Ga0307469_10074439	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300031720\|Ga0307469_10567177	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300031720\|Ga0307469_12152753	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031726\|Ga0302321_101583583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. H6	756	Open in IMG/M
3300031740\|Ga0307468_100368473	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300031747\|Ga0318502_10218067	Not Available	1107	Open in IMG/M
3300031763\|Ga0318537_10305652	Not Available	588	Open in IMG/M
3300031765\|Ga0318554_10537266	Not Available	660	Open in IMG/M
3300031781\|Ga0318547_10266011	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300031797\|Ga0318550_10192713	Not Available	985	Open in IMG/M
3300031893\|Ga0318536_10680114	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031903\|Ga0307407_10682454	Not Available	772	Open in IMG/M
3300031918\|Ga0311367_10033376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	5586	Open in IMG/M
3300031942\|Ga0310916_11447240	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031944\|Ga0310884_10443900	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031946\|Ga0310910_10882264	Not Available	702	Open in IMG/M
3300031996\|Ga0308176_11885563	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300032004\|Ga0307414_11058866	Not Available	748	Open in IMG/M
3300032005\|Ga0307411_12209435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300032205\|Ga0307472_100175392	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300034354\|Ga0364943_0218938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	704	Open in IMG/M
3300034417\|Ga0364941_109999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.58%
Host-Associated	Host-Associated	23.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.47%
Plants	Host-Associated → Plants	23.42%
Aquatic	Environmental → Aquatic	8.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.22%
Peat	Environmental → Terrestrial → Peat	15.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.21%
Sediment	Environmental → Aquatic → Sediment	5.41%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.32%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	15.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.80%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_120745771	3300000550	Soil	VALHPALRRLIDTKLALAQPPQWSLPIAEVRRNFRALWTPAITGP
F14TC_1030845403	3300000559	Soil	MALNAALKQLIETKLAHTHAPQWALPITEVRQAFRNLW
F14TC_1082823882	3300000559	Soil	MALNASLKQLIETKLAHAQKPQWELPIAEVRQAFRNL*
JGI10216J12902_1109505601	3300000956	Soil	MALNAALKQLIDDKIAHATAPQWSLPIADVRAAFRRIWTPAITGAPIPIPRVDD
F14TB_1040332351	3300001431	Soil	MTLNPALRQLIETKLAHTLKPQWELPITEVRQSFRNLWTPA
Ga0066688_101792451	3300005178	Soil	MALNAALKQLIETKLAHTHEPQWALPITEVRQAFRNLWTPA
Ga0066688_107483391	3300005178	Soil	MALNAALKQLIETKLANTHEPQWVLPITEVRQAFRNLWTPAITGEVVSIRRIEDVTIPGL
Ga0065705_108149731	3300005294	Switchgrass Rhizosphere	MALNAALRQLLEAKLAHTQKAQWELPIEQVRTAFRDLWTPAMTGDPVSLP
Ga0070690_1014736381	3300005330	Switchgrass Rhizosphere	MALNTALKQLIATKLAHAQRPQWEMPIAEVRQAFRNLWTPAITGEVVPLRRIEDITI
Ga0066388_1022722071	3300005332	Tropical Forest Soil	MPLNAALKQLIETKLAHSREPQWALPIAEVRQAFRNLWTPAMTGDPVPI
Ga0066388_1076829321	3300005332	Tropical Forest Soil	MSMHPALQRLIETKLAHTVAPQWMLPIAEVRRSFRGLWTPAMTGPPLPVDR
Ga0066388_1081608381	3300005332	Tropical Forest Soil	MALNAALKQLIDTKLAHAVKPQWELPIGEVRQAFRNLWTPAITGEKLSIGRVDDVKLPGI
Ga0068868_1016564091	3300005338	Miscanthus Rhizosphere	MALDPALKRLIETKLAHASAPQWALPIDEVRQAFRNLWTPLITGDPISIRRVED
Ga0070689_1008748021	3300005340	Switchgrass Rhizosphere	MALNSALKQLIEAKLAHTAAPQWMLPITEVRQAFRNLWTPAMT
Ga0066689_109687932	3300005447	Soil	MALNAALKQLIETKLANTHEPQWVLPITEVRQAFRNLWTPAITGEVVSIRR
Ga0070685_100230061	3300005466	Switchgrass Rhizosphere	MALNTALKQLIATKLAHAQRPQWEMPIAEVRQAFRNLWTPAITGEVVPLRRIEDITIPGV
Ga0068854_1021184051	3300005578	Corn Rhizosphere	MAMHPALQHLIDTKLAHTRAPQWELPIADVRDSFRALWT
Ga0066903_1053815822	3300005764	Tropical Forest Soil	MPLNPALKQLIETKLAHTHAAQWELPIAEVREAFRNLWTPAITGEPVALRRI
Ga0068860_1012169891	3300005843	Switchgrass Rhizosphere	MPLDPALHRLIEDKLAHTQARQWEMPIADVRKGFRDFWTPAITGQPPAPERI
Ga0081455_109912202	3300005937	Tabebuia Heterophylla Rhizosphere	MPLDPALKQLIDAKLAHTRAQQWELPIADVRRAFRELWTPAMTG
Ga0075023_1003768871	3300006041	Watersheds	MALNPALQQLIAAKLAHTRQPQWELPITEVRRAFRELWTPAITGESVALPRIEDLTIP
Ga0074053_107007841	3300006575	Soil	MPLHPALERLIQNKLEHARAPQWALPIAEVREAFRELWTPALTGDP
Ga0075435_1011938611	3300007076	Populus Rhizosphere	LALNAALKQLIETKLAHTHEPQWALPIAEVRQAFRNLWTPAITGEPVSIRRIEDVTIPG
Ga0075435_1018699631	3300007076	Populus Rhizosphere	MALNAALKHLIDTKLAHTREPQWTLPIAEVRETFRSLWTPAITGPP
Ga0105251_102617531	3300009011	Switchgrass Rhizosphere	MALNPALKQLIEGKLANTRLPQWRLPITEVRQAFRN
Ga0075418_125006591	3300009100	Populus Rhizosphere	MALNAALKQLIETKLAHTREPQWALPITEVRQAFRNLWTPAITGPPISIRRIEDVTIPG
Ga0105091_100922081	3300009146	Freshwater Sediment	MALNAALKQLIETKLAHTREPQWALPIAEVRQAFRNLWTPAI
Ga0105092_100216941	3300009157	Freshwater Sediment	MALNAALKQLIETKLAHTREPQWALPIAEVRQAFRNLWTPAITGPPISIR
Ga0105248_120612473	3300009177	Switchgrass Rhizosphere	MALNAALKQLLEAKLAHTQKAQWELPIGQVRKAFRELWTP
Ga0105248_132300572	3300009177	Switchgrass Rhizosphere	MALDPALKRLIETKLAHASAPQWALPIDEVRRAFRNLWTPAITG
Ga0126374_101554033	3300009792	Tropical Forest Soil	MALHPALRQLIDAKLAHAQKPQWEMSIEEVRQAFRNLWTPAMTGE
Ga0126380_105031892	3300010043	Tropical Forest Soil	MALDPALERLIQIKLAHTVRPQWELPIGEVRQAFRNLWTP
Ga0126384_104207512	3300010046	Tropical Forest Soil	MALHPALEQLIQTKLAHTRKPQWELPITEVRQSFRNLWTPAMTGDPVSLSRVEDIS
Ga0126373_129910932	3300010048	Tropical Forest Soil	MALNAALKQLIETKLAHTHKPQWELPTTEVRQAFRNLWTSA
Ga0126372_113856722	3300010360	Tropical Forest Soil	MPLNAALKQLIETKLAHTREPQWAMPIAEVRQAFRNLWTPAMTGD
Ga0126378_102846813	3300010361	Tropical Forest Soil	MPLNPALKQLIETKLAHTHTPQWELPIAEVRQAFRNLWT
Ga0126379_122238453	3300010366	Tropical Forest Soil	MALDPALRKLIETKLTHTQKPQWELPIAEVRQAFRNLWTP
Ga0126379_125004862	3300010366	Tropical Forest Soil	MALDPALERLIQTKLAHTRKPQWELPITEVRQAFRNLWTPAMTGDPVTLSRIEDRAVPAPDRSIPL
Ga0126381_1006944711	3300010376	Tropical Forest Soil	MALNASLKHLVEAKLTHTHAPQSALPIAEVRQAFRNLWTPDITAKPASVRRVEDVKISSADASIPV
Ga0126381_1051572481	3300010376	Tropical Forest Soil	MALHPALRQLIDAKLAHAQKPQWEMSIEEVRQAFRNLWTP
Ga0124844_12700081	3300010868	Tropical Forest Soil	MPLNAALKQLIETKLAHTREPQWAMPIAEVRQAWAMPIAEVRQAFRNLWTPAMTGDPVPIPRIEDITIPNVSA
Ga0137413_112640781	3300012924	Vadose Zone Soil	MALNAALKQLIETKLAHTQKPQWALPITEVRQAFRNLWTPSLTGERV
Ga0137407_115148092	3300012930	Vadose Zone Soil	MALNAALKQLIETKLAHTQKPQWALPITEVRQAFRNLWTPSLTGERVSIHRIEDVTI
Ga0164300_103291422	3300012951	Soil	MPLDPALHRLIEDKLAHTQARQWEMPIADVRKGFRDFWTPAITGQPPAP
Ga0164306_112651281	3300012988	Soil	VSLHPALERLIQTKLAHTVRPQWEQPISDVRQAFRNLWT
Ga0157375_124048231	3300013308	Miscanthus Rhizosphere	MPLHPALKQLIANKIAHTLKPQWELPIADVRQAFRALWTPAMTGPVVPLPRIEA
Ga0157380_121164941	3300014326	Switchgrass Rhizosphere	MALNAALKQLLEAKLAHAQKAQWELPIGQVRKTFRDLWTP
Ga0180104_12402461	3300014884	Soil	MALDPALKHLIQTKLAHSHAPQWVLPIAEVRQAFRNLWTPEITG
Ga0132258_100403981	3300015371	Arabidopsis Rhizosphere	MALNPALKHLIETKLAHTQKPQWELPVAEVRQAFRNLWTPALTGEPVT
Ga0132256_1012884091	3300015372	Arabidopsis Rhizosphere	MPLNNALRQLIATKLAHAREPQWAMPIEDVREAFRNLWTPALTGEPVSLRRTED
Ga0182041_111016961	3300016294	Soil	MALNASLKHLVEAKLAHTHAPQSALPIAEVRQAFRNLWT
Ga0182037_120283161	3300016404	Soil	MALNASLKHLVEAKLAHTHAPQSALPIAEVRQAFRNLWTPDITGKPVSVRRVE
Ga0180121_100697291	3300017695	Polar Desert Sand	MALHPALDRLIQTKLAHTLAPQWELPIAEVRRAFRALWTPAITGEPAP
Ga0187779_100457731	3300017959	Tropical Peatland	MALNPALKQLIETKLAHTQRPQWELPIADVRQAFRNLWTPAIAGEPVAVGRIED
Ga0187779_104683172	3300017959	Tropical Peatland	MALNPVLRQLIHAKLAHATAPQWALPIAEVRQAFRSLWTPAITGIPVPIERIEDL
Ga0184608_103580542	3300018028	Groundwater Sediment	MALNAILKQLIETKLAHTHEPQWALPITEVRQAFRNLWTPAITGE
Ga0184625_104459182	3300018081	Groundwater Sediment	MQSAAANTMALNAALKQLIETKLAHTHAPQWALPITEVRQAFRNLWTPAITGEPVSIRRIEDVTIPGV
Ga0066655_112364861	3300018431	Grasslands Soil	MALNAALKQLIETKLANTHEPQWVLPITEVRQAFR
Ga0207643_102025403	3300025908	Miscanthus Rhizosphere	MALNAALKQLLEAKLAHTQKAQWELPIGQVRKAFR
Ga0207662_102786862	3300025918	Switchgrass Rhizosphere	MALNPALKQLIEAKLAHTPTPQWMLPITGVRQAFRNL
Ga0207681_115264261	3300025923	Switchgrass Rhizosphere	MALDPALKRLIETKLAHASAPQWALPIDEVRRAFRNLWTPAITGDPISIRRVEDVTIPGAGARIPA
Ga0207650_101130701	3300025925	Switchgrass Rhizosphere	MALNPALKQLIEAKLAHTPTPQWMLPITGVRQAFRNLWTPAMTGELVPLRRIEDVAIPGP
Ga0207650_110396233	3300025925	Switchgrass Rhizosphere	MALNAALKQLIDTKLAHARAPQWAMPIAEVRQAFRNLWTPAMTGEPVPIHR
Ga0207679_101474252	3300025945	Corn Rhizosphere	MALNPALKQLIEAKLAHTPTPQWMLPITGVRQAFRNLWTPAMTGELVPLRRIEDVAIPGPAAPI
Ga0207651_106664492	3300025960	Switchgrass Rhizosphere	MALDAALKQLIATKLAHAQRPQWEMPIADVRQAFRNLWTPAITGEVVSLRRIEDIT
Ga0207658_100184528	3300025986	Switchgrass Rhizosphere	MALDPALKRLIETKLAHASAPQWALPIDEVRQAFRNLWTPLI
Ga0207676_100606271	3300026095	Switchgrass Rhizosphere	MALNPALKQLIEGKLANTRLPQWRLPITEVRQAFRNLWTPAMTGEP
Ga0209465_106726261	3300027874	Tropical Forest Soil	MALHPALRQLIDTKLALARPPQWELPIAEVRRSFRALWTSEMTGEPLAVDRVED
Ga0209583_102826461	3300027910	Watersheds	MALNPALQQLIAAKLAHTRQPQWELPITEVRRAFRELWTPAITGESVALPRIEDLTIPG
Ga0209069_102963752	3300027915	Watersheds	MALNPALKQLIAAKLAHTRQTQWELPITEVRRAFRELWTPAITGESVALP
Ga0268265_100770896	3300028380	Switchgrass Rhizosphere	MALNAALRQLLEAKLAHTQKAQWELPIEQVRTAFR
Ga0302264_10846793	3300028732	Fen	MALNAALQQLIATKLAHTRQPQWELPIAEVRRAFRELWTPAITGEPVAIHRVEDVMIP
Ga0302214_10829831	3300028736	Fen	MALNAALQQLIATKLAHTRQPQWELPIAEVRRAFRELWTPAITGEPVAIHRVEDVMIPG
Ga0302256_100713992	3300028741	Fen	MHPALQHLIDTKLAHTRAQQWELPIADVRQGFRALWTPAMTGAPLPVDR
Ga0311347_109788441	3300029923	Fen	MPLNPALKKLIETKLAHTRQPQWTLPIAAVRQGFRSLWTPALTGEPVS
Ga0311337_111558732	3300030000	Fen	MHPALQHLIDTKLAHTRAQQWELPIADVRQGFRALWTPAMTGAPLPVDRVD
Ga0311350_102175793	3300030002	Fen	MPLHAALQHLIETKLAHTRAPQWKLPIAEVRQSFRALWTPAMTGVPLPVGRVDEV
Ga0311350_116145372	3300030002	Fen	MHPALQHLIDTKLAHTRAQQWELPIADVRQGFRALWTPAM
Ga0302175_100709942	3300030014	Fen	MHPALQHLIDTKLAHTRAQQWELPIADVRQGFRALWTPAMTGAPLPVD
Ga0311349_104433603	3300030294	Fen	MALNAALKQLIAAKLVHTRQPQWELPITEVRRAFRELWTPAITGEPA
Ga0302211_100390241	3300030491	Fen	MHPALQHLIDTKLAHTHAQQWELPIADVRQGFRALWTPAMTGAPLPVDRVDDI
Ga0311335_105395711	3300030838	Fen	MPLNPALKKLIETKLAHTRQPQWALPIAEVRQGFRSLWTPA
Ga0311335_109329782	3300030838	Fen	MAMHPALQHLIETKLAHTHAPQWALPIAEVRESFRALWTP
Ga0311335_111353281	3300030838	Fen	MALNAALKQLIAAKLVHTRQPQWELPITEVRRAFRELWTPAIT
Ga0311366_103884931	3300030943	Fen	MHPALRHLIDTKLAHTRAQQWELPIADVRQGFRALWTP
Ga0307498_104649762	3300031170	Soil	MALNPALRQLIQTKLAHTHAAQWELPIAEVRQAFRNLWTPAMTGEPVSLRRIQDVTIPGADG
Ga0302323_1024287762	3300031232	Fen	MALNPALRQLLATKLAHASAPQWDLPIADVRQAFRDLWTPAITGEPVS
Ga0307506_105079231	3300031366	Soil	MALNPALKQLIDTKLAHTHAPQWMLPITEVRQAFRNLWTPAMTGEMVSLRRIEDMA
Ga0306917_110991881	3300031719	Soil	MALHPALERLIQTKLAHTHKPLWELPISEVRQAFRDLWTPAI
Ga0307469_100744393	3300031720	Hardwood Forest Soil	MALNTALKQLIETKLAHTREPQWALPITEVRQAFRNLWTPAITGELVS
Ga0307469_105671772	3300031720	Hardwood Forest Soil	MALNAALKQLIETKLAHTREPQWALPIAEVRQAFRNLWTPAITGPPISIRRIEDVTIPGA
Ga0307469_121527532	3300031720	Hardwood Forest Soil	MPLDPGLQRLIETKLAHTQKPQWELPIAEVRQAFRNLWT
Ga0302321_1015835833	3300031726	Fen	MALNATLQQLIATKLAHTRRPQWELPIAEVRRAFRDLWTPAITGLPVAIHRVE
Ga0307468_1003684732	3300031740	Hardwood Forest Soil	MALNPALKQLIETKLAHTRAPQWALPIAEVRQAFRNLWTPAITGQPISIRRIEDV
Ga0318502_102180671	3300031747	Soil	MALHPALRQLIDTKLAHAQKPQWEMSIEEVRQAFRNLW
Ga0318537_103056522	3300031763	Soil	MALHPALRQLIDTKLAHAQKPQWEMSIEEVRQAFRNLWTPAMTGEPVPVHRTAHLNIPG
Ga0318554_105372662	3300031765	Soil	MALHPALRQLIDTKLAHAQKPQWEMSIEEVRQAFRNLWTPAMTGEPVPV
Ga0318547_102660112	3300031781	Soil	MALHPALRQLIDTKLAHAQKPQWEMSIEEVRQAFRNLWTPAMTGEPVPVHRTAHLNIPGANA
Ga0318550_101927132	3300031797	Soil	MALHPALRQLIDTKLAHAQKPQWEMSIEEVRQAFRNLWTPAMTGE
Ga0318536_106801141	3300031893	Soil	MLLNAALKQLIETKLAHTRALQWELPIAEVRQAFRNLW
Ga0307407_106824541	3300031903	Rhizosphere	MALNAALKQLIDAKLAHAHAPQWETPIEHVRQAFRALWTPVITG
Ga0311367_100333761	3300031918	Fen	MELNAALKQLIASKLAHTRQPQWELPIAEVRRAFRELWTPAITGEP
Ga0310916_114472402	3300031942	Soil	MPLHPALERLIQTKLAHTHKPQWALPISEVRQAFRDLWTPAITGDPMSVSRIEDISVPG
Ga0310884_104439001	3300031944	Soil	MPLDPALHRLIEDKLAHTQARQWEMPIADVRKGFRDFWTPAITGQPPA
Ga0310910_108822641	3300031946	Soil	MLLNAALKQLIETKLAHTRALQWELPIAEVRQAFRNLWTPAVTGE
Ga0308176_118855631	3300031996	Soil	MALNAALKQLIDTKLAHTSRPQWELPIADVRQAFRNLWTPALTGEPATLPRIEDITIP
Ga0307414_110588662	3300032004	Rhizosphere	MALNAALKQLIDAKLAHAHAPQWETPVEHVRQAFR
Ga0307411_122094351	3300032005	Rhizosphere	MPLNAALKQLIETKLAHTHEPQWALPISEVRQAFRNLWTPAITGEPVSMRR
Ga0307472_1001753922	3300032205	Hardwood Forest Soil	MALNAALKQLIETKLAHTREPQWALPIAEVRQAFRN
Ga0364943_0218938_507_704	3300034354	Sediment	MQSTAANTMALNAALKQLIETKLAHTHAPQWALPITEVRQAFRNLWTPAITGELVSIRRIEDVTIP
Ga0364941_109999_189_323	3300034417	Sediment	MALNAALKQLIETKLAHTHEPQWALPITEVRQAFRNPLDTRHHW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086316

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences