Metagenome Family F086298

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086298
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	52 residues
Representative Sequence	MSDYMPEEIQEIEDLQKINVAVEEPRQPLKSFYDWLESITSKEKGKSFFDWLN
Number of Associated Samples	71
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.48 %
% of genes near scaffold ends (potentially truncated)	25.23 %
% of genes from short scaffolds (< 2000 bps)	81.98 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (45.045 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (42.342 % of family members)
Environment Ontology (ENVO)	Unclassified (84.685 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.396 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.26% β-sheet: 0.00% Coil/Unstructured: 37.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03237	Terminase_6N	2.70
PF02608	Bmp	1.80
PF07486	Hydrolase_2	0.90
PF00959	Phage_lysozyme	0.90
PF13392	HNH_3	0.90
PF00005	ABC_tran	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	1.80
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.07 %
Unclassified	root	N/A	27.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	48.65 %
Unclassified	root	N/A	27.93 %
Viruses	superkingdom	All Organisms → Viruses	23.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.05 %
Unclassified	root	N/A	27.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.60 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.83 %
Unclassified	root	N/A	27.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.41 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	3.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	5.41 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	3.60 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.41 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	5.41 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5.41 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	5.41 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	5.41 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.32 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	5.41 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001450\|JGI24006J15134_10060938	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300002482\|JGI25127J35165_1006266	All Organisms → cellular organisms → Bacteria → Proteobacteria	3113	Open in IMG/M
3300002482\|JGI25127J35165_1058237	Not Available	824	Open in IMG/M
3300002482\|JGI25127J35165_1073010	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	713	Open in IMG/M
3300002483\|JGI25132J35274_1055368	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	851	Open in IMG/M
3300002488\|JGI25128J35275_1010216	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2454	Open in IMG/M
3300005430\|Ga0066849_10415933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	505	Open in IMG/M
3300006735\|Ga0098038_1024681	All Organisms → Viruses → Predicted Viral	2271	Open in IMG/M
3300006735\|Ga0098038_1029413	All Organisms → Viruses → Predicted Viral	2055	Open in IMG/M
3300006735\|Ga0098038_1168739	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300006735\|Ga0098038_1181681	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300006737\|Ga0098037_1117834	Not Available	909	Open in IMG/M
3300006737\|Ga0098037_1221369	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	614	Open in IMG/M
3300006737\|Ga0098037_1242870	Not Available	579	Open in IMG/M
3300006749\|Ga0098042_1068256	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300006749\|Ga0098042_1110018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	693	Open in IMG/M
3300006789\|Ga0098054_1311195	Not Available	562	Open in IMG/M
3300006921\|Ga0098060_1038075	All Organisms → Viruses → Predicted Viral	1448	Open in IMG/M
3300006928\|Ga0098041_1125576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	827	Open in IMG/M
3300006929\|Ga0098036_1144445	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300006990\|Ga0098046_1081678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	727	Open in IMG/M
3300007963\|Ga0110931_1084267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	959	Open in IMG/M
3300008219\|Ga0114905_1096868	Not Available	1026	Open in IMG/M
3300008220\|Ga0114910_1043193	All Organisms → Viruses → Predicted Viral	1470	Open in IMG/M
3300009412\|Ga0114903_1149515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	509	Open in IMG/M
3300009481\|Ga0114932_10521898	Not Available	698	Open in IMG/M
3300009593\|Ga0115011_10016355	All Organisms → Viruses → Predicted Viral	4923	Open in IMG/M
3300009593\|Ga0115011_10035428	Not Available	3370	Open in IMG/M
3300009593\|Ga0115011_11628642	Not Available	575	Open in IMG/M
3300009703\|Ga0114933_10133277	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300009790\|Ga0115012_10610431	Not Available	865	Open in IMG/M
3300010148\|Ga0098043_1092623	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	888	Open in IMG/M
3300010148\|Ga0098043_1171918	Not Available	607	Open in IMG/M
3300010153\|Ga0098059_1088795	Not Available	1230	Open in IMG/M
3300011013\|Ga0114934_10419129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	595	Open in IMG/M
3300011013\|Ga0114934_10427631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	588	Open in IMG/M
3300011254\|Ga0151675_1103580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	504	Open in IMG/M
3300012919\|Ga0160422_10962656	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	551	Open in IMG/M
3300012920\|Ga0160423_10240901	All Organisms → Viruses → Predicted Viral	1253	Open in IMG/M
3300012920\|Ga0160423_10295302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1116	Open in IMG/M
3300012928\|Ga0163110_10390795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1040	Open in IMG/M
3300012952\|Ga0163180_10000046	Not Available	57225	Open in IMG/M
3300012952\|Ga0163180_10000497	Not Available	22776	Open in IMG/M
3300012952\|Ga0163180_10200194	Not Available	1364	Open in IMG/M
3300012952\|Ga0163180_10580612	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	850	Open in IMG/M
3300012952\|Ga0163180_10885090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	706	Open in IMG/M
3300012953\|Ga0163179_10863436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	780	Open in IMG/M
3300017709\|Ga0181387_1064040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	738	Open in IMG/M
3300017720\|Ga0181383_1162859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	597	Open in IMG/M
3300017730\|Ga0181417_1154683	Not Available	553	Open in IMG/M
3300017738\|Ga0181428_1107705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	652	Open in IMG/M
3300017739\|Ga0181433_1111862	Not Available	658	Open in IMG/M
3300017746\|Ga0181389_1050737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1212	Open in IMG/M
3300017755\|Ga0181411_1232322	Not Available	511	Open in IMG/M
3300017758\|Ga0181409_1160127	Not Available	656	Open in IMG/M
3300017759\|Ga0181414_1056593	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300017760\|Ga0181408_1193368	Not Available	518	Open in IMG/M
3300017764\|Ga0181385_1103533	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	871	Open in IMG/M
3300017764\|Ga0181385_1139246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	738	Open in IMG/M
3300020246\|Ga0211707_1040616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	632	Open in IMG/M
3300020374\|Ga0211477_10336693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	502	Open in IMG/M
3300020403\|Ga0211532_10181796	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	847	Open in IMG/M
3300020409\|Ga0211472_10246455	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	718	Open in IMG/M
3300020410\|Ga0211699_10049578	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300020417\|Ga0211528_10105461	All Organisms → Viruses → Predicted Viral	1140	Open in IMG/M
3300020417\|Ga0211528_10403227	Not Available	501	Open in IMG/M
3300020422\|Ga0211702_10211664	Not Available	590	Open in IMG/M
3300020428\|Ga0211521_10138531	All Organisms → cellular organisms → Bacteria → Proteobacteria	1145	Open in IMG/M
3300020436\|Ga0211708_10107894	Not Available	1093	Open in IMG/M
3300020436\|Ga0211708_10427866	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300020442\|Ga0211559_10209424	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	919	Open in IMG/M
3300020470\|Ga0211543_10131462	Not Available	1264	Open in IMG/M
3300020470\|Ga0211543_10493787	Not Available	582	Open in IMG/M
3300022074\|Ga0224906_1000440	Not Available	23594	Open in IMG/M
3300022074\|Ga0224906_1001018	Not Available	14345	Open in IMG/M
3300022074\|Ga0224906_1013366	All Organisms → Viruses → Predicted Viral	3108	Open in IMG/M
3300022074\|Ga0224906_1020867	All Organisms → Viruses → Predicted Viral	2349	Open in IMG/M
3300022074\|Ga0224906_1194050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	556	Open in IMG/M
3300025086\|Ga0208157_1039463	All Organisms → Viruses	1317	Open in IMG/M
3300025086\|Ga0208157_1048531	All Organisms → Viruses → Predicted Viral	1149	Open in IMG/M
3300025086\|Ga0208157_1075971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	848	Open in IMG/M
3300025101\|Ga0208159_1066017	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300025101\|Ga0208159_1080334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	617	Open in IMG/M
3300025102\|Ga0208666_1041472	All Organisms → Viruses → Predicted Viral	1333	Open in IMG/M
3300025110\|Ga0208158_1085373	All Organisms → Viruses	749	Open in IMG/M
3300025127\|Ga0209348_1004922	All Organisms → cellular organisms → Bacteria	5840	Open in IMG/M
3300025127\|Ga0209348_1019370	All Organisms → Viruses	2565	Open in IMG/M
3300025127\|Ga0209348_1064118	All Organisms → Viruses	1204	Open in IMG/M
3300025128\|Ga0208919_1031967	All Organisms → Viruses	1900	Open in IMG/M
3300025128\|Ga0208919_1103752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	913	Open in IMG/M
3300025132\|Ga0209232_1003526	All Organisms → cellular organisms → Bacteria	7351	Open in IMG/M
3300025132\|Ga0209232_1021342	All Organisms → Viruses	2542	Open in IMG/M
3300025132\|Ga0209232_1081072	All Organisms → Viruses	1123	Open in IMG/M
3300025137\|Ga0209336_10042648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1451	Open in IMG/M
3300025264\|Ga0208029_1045801	Not Available	938	Open in IMG/M
3300025280\|Ga0208449_1027872	All Organisms → Viruses → Predicted Viral	1692	Open in IMG/M
3300025300\|Ga0208181_1083187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	623	Open in IMG/M
3300027906\|Ga0209404_10012685	All Organisms → Viruses → Predicted Viral	4605	Open in IMG/M
3300027906\|Ga0209404_10107314	Not Available	1659	Open in IMG/M
3300029309\|Ga0183683_1003619	All Organisms → Viruses	5260	Open in IMG/M
3300029309\|Ga0183683_1014489	All Organisms → Viruses → Predicted Viral	1825	Open in IMG/M
3300029309\|Ga0183683_1048653	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	616	Open in IMG/M
3300029318\|Ga0185543_1023274	All Organisms → Viruses	1439	Open in IMG/M
3300029319\|Ga0183748_1000289	Not Available	33683	Open in IMG/M
3300029319\|Ga0183748_1067704	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300029448\|Ga0183755_1039898	All Organisms → Viruses → Predicted Viral	1279	Open in IMG/M
3300029448\|Ga0183755_1043819	Not Available	1183	Open in IMG/M
3300029448\|Ga0183755_1046820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1119	Open in IMG/M
3300029448\|Ga0183755_1068247	Not Available	807	Open in IMG/M
3300029787\|Ga0183757_1012521	All Organisms → Viruses → Predicted Viral	2324	Open in IMG/M
3300029792\|Ga0183826_1042273	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	56.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	23.42%
Strait	Environmental → Aquatic → Marine → Strait	15.32%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.60%
Coastal	Environmental → Aquatic → Marine → Coastal	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	53.15%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	23.42%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	15.32%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.60%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	42.34%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	23.42%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	15.32%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	5.41%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	5.41%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	3.60%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.70%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.90%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300011254	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020422	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_100609384	3300001450	Marine	VSDYMPEEIQEIEDLQKINVAVEEPPQPLKTFYDWLENITAKEKGKSFFDWLK*
JGI25127J35165_10062669	3300002482	Marine	MSDYMPEEIQEINDLQKINVAMEELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN*
JGI25127J35165_10582372	3300002482	Marine	MSDYMPEEIQEINDLQTINVAMEELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN*
JGI25127J35165_10730102	3300002482	Marine	VDNDYMPEEIQEINDLQTINVAMEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN*
JGI25132J35274_10553682	3300002483	Marine	MSDYMPEEIQEINDLQKINVAIEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN*
JGI25128J35275_10102165	3300002488	Marine	VDNDYMPEEIQEINDLQKINVAVEELPQPSQPFFNWLETVTSEEKGKSFFDWLLK*
Ga0066849_104159332	3300005430	Marine	MPEETQETEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN*
Ga0098038_10246814	3300006735	Marine	MSDYMPEEIQEIEDLQKINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN*
Ga0098038_10294135	3300006735	Marine	MSDYMPEEIQEIEDLQKINVAVEEPKQPYKSFYDWLESITSKEKGKSFFDWLN*
Ga0098038_11687394	3300006735	Marine	MSDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKSFFDWLN*
Ga0098038_11816811	3300006735	Marine	MPDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDWL
Ga0098037_11178344	3300006737	Marine	MPEEIQEIEDLQKINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN*
Ga0098037_12213694	3300006737	Marine	MSDYMPEEIQEIEDLQKINVAVEEPRQPLKSFYDWLESITSNEKGKSFFDWLN*
Ga0098037_12428703	3300006737	Marine	VDSDYMPEEIQEIEDLQKINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN*
Ga0098042_10682564	3300006749	Marine	MPEEIQEIEDLQKINVAIEEPREPLKSFYDWLENITSKEKGKSFFDWLN*
Ga0098042_11100181	3300006749	Marine	KINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN*
Ga0098054_13111952	3300006789	Marine	MIDYLPEHIKEIKDLQKINVEIKELPRPTKSFFTWLDDTTSRETGKDFYTWLLGDK*
Ga0098060_10380752	3300006921	Marine	MPDYMPEEIQEIEDLQKINVAVEEPIQPLKTFYDWLESITSKEKGKSFFDWLN*
Ga0098041_11255761	3300006928	Marine	IRWRLYLMSDYMPEEIQEIEDLQKINVAVEEPKQPYKSFYDWLESITSKEKGKSFFDWLN
Ga0098036_11444454	3300006929	Marine	VDSDYMPEEIQEIEDLQKINVAIEEPREPLKSFYDWLENITSKEKGKSFFDWLN*
Ga0098046_10816782	3300006990	Marine	MPDYMPEEIQEIEDLQKINVAVEEPKQPYKSFYDWLESITSKEKGKSFFDWLN*
Ga0110931_10842672	3300007963	Marine	MPDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDWLN*
Ga0114905_10968683	3300008219	Deep Ocean	VSDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKGFFDWLLK*
Ga0114910_10431933	3300008220	Deep Ocean	VSDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKGFFDWLLK*
Ga0114903_11495152	3300009412	Deep Ocean	HMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKGFFDWLLK*
Ga0114932_105218981	3300009481	Deep Subsurface	RKRRRIHLMSDYMPEEIQEINDLQTINVAMEELPEPSQPFFDWLEKVTSQEKGKSFFDWLN*
Ga0115011_1001635510	3300009593	Marine	MPEETQEIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN*
Ga0115011_100354287	3300009593	Marine	MPDYLPEEIQEIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN*
Ga0115011_116286423	3300009593	Marine	MPKETPEIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN*
Ga0114933_101332771	3300009703	Deep Subsurface	MSDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLENITSKEKGKGFFD
Ga0115012_106104311	3300009790	Marine	MPKETPEIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSF
Ga0098043_10926234	3300010148	Marine	MSDYMPEEIQEIEDLQKINVAAEEPRQPLKSFYDWLESITSKEKGKSFFDWLN*
Ga0098043_11719183	3300010148	Marine	MSDYMPEEIQEIEDLQKINVAVEEPRQPLKSFYDWLESITSKEKGKSFFDWL
Ga0098059_10887951	3300010153	Marine	GSIVKDDLQTINVAAKEITQPLVPFFDWLTTITSKEKGKSFYSWLEGDK*
Ga0114934_104191292	3300011013	Deep Subsurface	VSDFMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKGFFDWLLK*
Ga0114934_104276312	3300011013	Deep Subsurface	PEEIQEIEDLQKINVAVEEPKQPLKPFYDWLETITSKEKGKSFFDWLLK*
Ga0151675_11035802	3300011254	Marine	GLQIMSDYMPEEIQEINDLQKINVAMEELPEPSQPFFSWLEKITSEEKGKSFFDWLLN*
Ga0160422_109626562	3300012919	Seawater	VANDYMPEEIQEINDLQKINVAIKELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN*
Ga0160423_102409014	3300012920	Surface Seawater	MPEEIQEIEDLQKINVAAEEPRQPLKSFYDWLENITSKEKGKSFFDWLN*
Ga0160423_102953022	3300012920	Surface Seawater	MSDYMPEEIQEINDLQKINVAIKELPKPSQPFFDWLEKVTSQEKGKSFFDWLLN*
Ga0163110_103907952	3300012928	Surface Seawater	MSDYMPEEIQEINDLQKINVAMEELPEPSQPFFSWLEKITSEEKGKSFFDWLLN*
Ga0163180_100000467	3300012952	Seawater	VDNDYMPEEINDLQKINVDMKELPQPTKSFFTWLDDITSREVGKDFYTWLLGDK*
Ga0163180_1000049728	3300012952	Seawater	MSDYMPEEIQEINDLQKINVAMEELPEPSQPFFDWLEKITSEEKGKSFFDWLLK*
Ga0163180_102001942	3300012952	Seawater	MSDYMPEEIQEINDLQKINVAIKELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN*
Ga0163180_105806123	3300012952	Seawater	MSDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDW
Ga0163180_108850902	3300012952	Seawater	MSDYMPEEIQEINDLQTINVAMEELPEPSQPFFNWLEKITSEEKGKSFFDWLLN*
Ga0163179_108634363	3300012953	Seawater	VSDHTPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDWLK*
Ga0181387_10640401	3300017709	Seawater	MPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDWLLK
Ga0181383_11628592	3300017720	Seawater	VADYMPEEIQEIEDLQKINVAVEEPKQPLKPFYDWLETITSKEKGKSFFDWLLK
Ga0181417_11546833	3300017730	Seawater	MPKETPEIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0181428_11077052	3300017738	Seawater	YLMSDYMPEEIQEIEDLQKINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN
Ga0181433_11118623	3300017739	Seawater	VSDHTPEEIQEIEDLQKINVSAEEPQQPLKTFFDWLESITSKEKGKSFFDWLN
Ga0181389_10507374	3300017746	Seawater	IKLKVEVIVANDYMPEEIQEIEDLQKINVAAEEPKQPLKPFYDWLETITSKEKGKSFFDWLLK
Ga0181411_12323222	3300017755	Seawater	VANDYVPEEIQEIEDLQKINVTVEEPPQPLKTFYDWLESITSKEKGKSFFDWLLK
Ga0181409_11601272	3300017758	Seawater	MSNDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLETITSKEKGKSFFDWLLK
Ga0181414_10565933	3300017759	Seawater	MSDYMPEEIQEIEDLQKINVAVEEPTQPLKTFYDWLETITSKEKGKSFFDWLLK
Ga0181408_11933681	3300017760	Seawater	MSDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKS
Ga0181385_11035334	3300017764	Seawater	MSDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKG
Ga0181385_11392461	3300017764	Seawater	EIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0211707_10406162	3300020246	Marine	IQEINDLQKINVAMEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN
Ga0211477_103366932	3300020374	Marine	MPNDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKGFFDWLLK
Ga0211532_101817963	3300020403	Marine	MSDYMPEEIQEINDLQKINVAIEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN
Ga0211472_102464553	3300020409	Marine	MSDYMPEEIQEINDLQKINVAIKELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN
Ga0211699_100495785	3300020410	Marine	MSDYMPEEIQEINDLQKINVAMEELPEPSQPFFDWLEKITSEEKGKSFFDWLLN
Ga0211528_101054613	3300020417	Marine	VDNDYMPEEINDLQKINVDMKELPQPTKSFFTWLDDITSREVGKDFYTWLLGDK
Ga0211528_104032271	3300020417	Marine	MSDYMPEEIQEINDLQKINVAIKELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN
Ga0211702_102116641	3300020422	Marine	MSDYMPEEIQEINDLQKINVAMEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN
Ga0211521_101385313	3300020428	Marine	EVIVANDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKGFFDWLLK
Ga0211708_101078941	3300020436	Marine	MPEEIQEINDLQKINVAVEELPQPTKSFFNWLDDITSREIGKDFYTWLLGDK
Ga0211708_104278662	3300020436	Marine	MSSDYMPEEIQEIDDLQKINVAIEELPQPTKSFFNWLDNITSRETGKDFYTWLLGDK
Ga0211559_102094242	3300020442	Marine	MPEEINDLQKINVDMKELPQPTKSFFTWLDDITSKEVGKDFYTWLLGDKQ
Ga0211543_101314624	3300020470	Marine	MPEEIQEINDLQKINVAIEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN
Ga0211543_104937873	3300020470	Marine	MPEEINDLQKINVDMKELPQPTKSFFTWLDDITSREVGKDFY
Ga0224906_100044011	3300022074	Seawater	MSNDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDWLLK
Ga0224906_100101817	3300022074	Seawater	MSDYMPEEIQEIEDLQKINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN
Ga0224906_10133668	3300022074	Seawater	MPEEIQEIEDLQKINVSAEEPQQPLKTFFDWLESITSKEKGKSFFDWLN
Ga0224906_10208674	3300022074	Seawater	MSDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLETITSKEKGKSFFDWLLK
Ga0224906_11940502	3300022074	Seawater	SDHTPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDWLK
Ga0208157_10394635	3300025086	Marine	MSDYMPEEIQEIEDLQKINVAAEEPRQPLKSFYDWLESITSKEKGKSFFDWLN
Ga0208157_10485315	3300025086	Marine	MSDYMPEEIQEIEDLQKINVAVEEPKQPYKSFYDWLESITSKEKGKSFFDWL
Ga0208157_10759711	3300025086	Marine	INVAVEEPKQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0208159_10660171	3300025101	Marine	MSDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0208159_10803342	3300025101	Marine	MPEEIQEIEDLQKINVAIEEPREPLKSFYDWLENITSKEKGKSFFDWLN
Ga0208666_10414724	3300025102	Marine	MSDYMPEEIQEIEDLQKINVAVEEPKQPYKSFYDWLESITSKEKGKSFFDWLN
Ga0208158_10853731	3300025110	Marine	MPDYLPEEIQEIEDLQKINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN
Ga0209348_100492215	3300025127	Marine	MSDYMPEEIQEINDLQKINVAMEELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN
Ga0209348_10193706	3300025127	Marine	MPEEIQEINDLQTINVAMEELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN
Ga0209348_10641185	3300025127	Marine	MPEEIQEINDLQTINVAMEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN
Ga0208919_10319674	3300025128	Marine	MPEEIQEIEDLQKINVAVEEPRQPFKSFYDWLESITSKEKGKSFFDWLN
Ga0208919_11037523	3300025128	Marine	VDSDYMPEEIQEIEDLQKINVAIEEPREPLKSFYDWLENITSKEKGKSFFDWLN
Ga0209232_100352610	3300025132	Marine	MSDYMPEEIQEINDLQTINVAMEELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN
Ga0209232_10213425	3300025132	Marine	MPEEIQEINDLQKINVAVEELPQPSQPFFNWLETVTSEEKGKSFFDWLLK
Ga0209232_10810724	3300025132	Marine	MPEEIQEINDLQKINVAMEELPEPSQPFFDWLEKVTSQEKGKSFFDWLLN
Ga0209336_100426483	3300025137	Marine	VSDYMPEEIQEIEDLQKINVAVEEPPQPLKTFYDWLENITAKEKGKSFFDWLK
Ga0208029_10458012	3300025264	Deep Ocean	VSDYMPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKGFFDWLLK
Ga0208449_10278724	3300025280	Deep Ocean	MPEEIQEIEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKGFFDWLLK
Ga0208181_10831872	3300025300	Deep Ocean	MSNDYMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKGFFDWLLK
Ga0209404_1001268510	3300027906	Marine	MPEETQEIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0209404_101073144	3300027906	Marine	MPDYLPEEIQEIEDLQKINVAVEEPTQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0183683_10036195	3300029309	Marine	MSDYMPEEIQEIEDLQKINVAVEEPRQPLKSFYDWLESITSKEKGKSFFDWLN
Ga0183683_10144894	3300029309	Marine	MPEEIQEIEDLQKINVAAEEPRQPLKSFYDWLENITSKEKGKSFFDWLN
Ga0183683_10486531	3300029309	Marine	MSDYMPEEIQEIEDLQKINVAVEEPKQPYKSFYDWLESITSKEKGKSFFDW
Ga0185543_10232742	3300029318	Marine	MSDYMPEEIQEINDLQKINVAIEELPEPSQPFFSWLEKITSEEKGKSFFDWLLN
Ga0183748_100028917	3300029319	Marine	MPEEIQEINDLQTINVAIEELPEPSQPFFDWLEKVTSEEKGKSFFDWLLN
Ga0183748_10677042	3300029319	Marine	MSDYMPEEIQEINDLQKINVAMEELPEPSQPFFSWLEKITSEEKGKSFFDWLLN
Ga0183755_10398982	3300029448	Marine	MPEEIQEIEEDLQKINVAVEEPRQPLKTFYDWLESITSKEKGKSFFDWLK
Ga0183755_10438193	3300029448	Marine	MPEEIQEIEDLQKINVAVEEPKQPLKPFYDWLETITSKEKGKSFFDWLLK
Ga0183755_10468203	3300029448	Marine	MSNDFMPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0183755_10682473	3300029448	Marine	MPEEIQEIEDLQKINVMVEEVPQPTKSFFNWLDSITSKEKGKDFYTWLLGDK
Ga0183757_10125213	3300029787	Marine	MPEEIQEIEDLQKINVAVEEPKQPLKTFYDWLESITSKEKGKSFFDWLN
Ga0183826_10422731	3300029792	Marine	VDNDYMPEEIQEINDLQTINVAVEELPQPSQPFFNWLETVTSEEKGKSFFDWLLN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086298

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences