Metagenome / Metatranscriptome Family F086236

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086236
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	148 residues
Representative Sequence	DRFIQANALPRLGCVRHHRPRTGGLFIRVEVRSRVPVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSETPEPNSGMETIYGMQTICGTQTISEMETIICGVTGKNTFSLTAQGIGIATATATATIGGMATNAPSLMDRG
Number of Associated Samples	102
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.86 %
% of genes near scaffold ends (potentially truncated)	57.66 %
% of genes from short scaffolds (< 2000 bps)	63.96 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.171 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.649 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.80% β-sheet: 3.59% Coil/Unstructured: 94.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01471	PG_binding_1	30.63
PF07883	Cupin_2	0.90
PF00881	Nitroreductase	0.90
PF02567	PhzC-PhzF	0.90
PF06736	TMEM175	0.90
PF00211	Guanylate_cyc	0.90
PF13533	Biotin_lipoyl_2	0.90
PF00210	Ferritin	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.90
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.17 %
Unclassified	root	N/A	28.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.17 %
Unclassified	root	N/A	28.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.17 %
Unclassified	root	N/A	28.83 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	62.16 %
Unclassified	root	N/A	28.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	62.16 %
Unclassified	root	N/A	28.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	54.95 %
Unclassified	root	N/A	28.83 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.80 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	44.14 %
Unclassified	root	N/A	28.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.81 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.80 %
Cellvibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	44.14 %
Unclassified	root	N/A	28.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.81 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.80 %
Teredinibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	44.14 %
Unclassified	root	N/A	28.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.81 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.80 %
Teredinibacter turnerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter → Teredinibacter turnerae	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	44.14 %
Unclassified	root	N/A	28.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.81 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.80 %
Teredinibacter turnerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter → Teredinibacter turnerae	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11619155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1000	Open in IMG/M
3300000956\|JGI10216J12902_109708120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	547	Open in IMG/M
3300004633\|Ga0066395_10288189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	894	Open in IMG/M
3300005290\|Ga0065712_10051774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	781	Open in IMG/M
3300005343\|Ga0070687_100056162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2059	Open in IMG/M
3300005539\|Ga0068853_100595200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1050	Open in IMG/M
3300005555\|Ga0066692_10803524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter → Teredinibacter turnerae	578	Open in IMG/M
3300005598\|Ga0066706_10978633	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005713\|Ga0066905_100046388	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300005764\|Ga0066903_103489842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	847	Open in IMG/M
3300005842\|Ga0068858_101289533	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300005844\|Ga0068862_100447790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1217	Open in IMG/M
3300005937\|Ga0081455_10090759	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300006031\|Ga0066651_10164710	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300006163\|Ga0070715_10292916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	868	Open in IMG/M
3300006173\|Ga0070716_100874221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	702	Open in IMG/M
3300006794\|Ga0066658_10171387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1123	Open in IMG/M
3300006904\|Ga0075424_100564298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1216	Open in IMG/M
3300006904\|Ga0075424_101407995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	740	Open in IMG/M
3300009137\|Ga0066709_100630833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1531	Open in IMG/M
3300009147\|Ga0114129_10205080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2668	Open in IMG/M
3300009162\|Ga0075423_10395590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1450	Open in IMG/M
3300009162\|Ga0075423_11866555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300009545\|Ga0105237_12481098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	529	Open in IMG/M
3300010047\|Ga0126382_12168843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	534	Open in IMG/M
3300010335\|Ga0134063_10346679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300010362\|Ga0126377_11935322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300010376\|Ga0126381_102954211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	676	Open in IMG/M
3300010396\|Ga0134126_11871795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	657	Open in IMG/M
3300012199\|Ga0137383_11365288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	502	Open in IMG/M
3300012205\|Ga0137362_11328435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	604	Open in IMG/M
3300012206\|Ga0137380_10565917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996	Open in IMG/M
3300012210\|Ga0137378_10267095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1592	Open in IMG/M
3300012285\|Ga0137370_10957527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300012355\|Ga0137369_10418656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	962	Open in IMG/M
3300012358\|Ga0137368_10830553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	569	Open in IMG/M
3300012902\|Ga0157291_10135367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	715	Open in IMG/M
3300012904\|Ga0157282_10258789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300012913\|Ga0157298_10035566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1059	Open in IMG/M
3300012924\|Ga0137413_10560148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	850	Open in IMG/M
3300012929\|Ga0137404_11814773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012957\|Ga0164303_10878280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300012989\|Ga0164305_11114667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	679	Open in IMG/M
3300013307\|Ga0157372_10518474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1390	Open in IMG/M
3300015077\|Ga0173483_10201556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	917	Open in IMG/M
3300015077\|Ga0173483_10581126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	613	Open in IMG/M
3300015371\|Ga0132258_10477355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3113	Open in IMG/M
3300016445\|Ga0182038_11205517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300018000\|Ga0184604_10175587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	721	Open in IMG/M
3300018027\|Ga0184605_10117134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1184	Open in IMG/M
3300018054\|Ga0184621_10225384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300018076\|Ga0184609_10217658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	891	Open in IMG/M
3300019356\|Ga0173481_10214307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	844	Open in IMG/M
3300019356\|Ga0173481_10359924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	698	Open in IMG/M
3300019873\|Ga0193700_1044236	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	713	Open in IMG/M
3300019878\|Ga0193715_1085117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	652	Open in IMG/M
3300022756\|Ga0222622_10005596	All Organisms → cellular organisms → Bacteria → Proteobacteria	5652	Open in IMG/M
3300025271\|Ga0207666_1070636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	562	Open in IMG/M
3300025552\|Ga0210142_1000144	All Organisms → cellular organisms → Bacteria	15912	Open in IMG/M
3300025552\|Ga0210142_1035739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	949	Open in IMG/M
3300025898\|Ga0207692_10694421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	660	Open in IMG/M
3300025923\|Ga0207681_10246267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1393	Open in IMG/M
3300025926\|Ga0207659_10297406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1325	Open in IMG/M
3300025926\|Ga0207659_10444109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1091	Open in IMG/M
3300025930\|Ga0207701_10217947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1672	Open in IMG/M
3300025933\|Ga0207706_10046080	All Organisms → cellular organisms → Bacteria	3861	Open in IMG/M
3300026041\|Ga0207639_10709880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	933	Open in IMG/M
3300026325\|Ga0209152_10165956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	832	Open in IMG/M
3300026537\|Ga0209157_1096290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	1415	Open in IMG/M
3300026836\|Ga0207612_1003279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	672	Open in IMG/M
3300026867\|Ga0207475_1006062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	729	Open in IMG/M
3300028380\|Ga0268265_10843140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	896	Open in IMG/M
3300028828\|Ga0307312_10495898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	806	Open in IMG/M
3300028884\|Ga0307308_10195922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	968	Open in IMG/M
3300031231\|Ga0170824_120675149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	723	Open in IMG/M
3300031719\|Ga0306917_11129893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300032013\|Ga0310906_10210006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1188	Open in IMG/M
3300032261\|Ga0306920_102554785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	701	Open in IMG/M
3300033475\|Ga0310811_10792569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	887	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.88%
Host-Associated	Host-Associated	17.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.58%
Plants	Host-Associated → Plants	17.12%
Aquatic	Environmental → Aquatic	6.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.21%
Sediment	Environmental → Aquatic → Sediment	4.50%
Marine	Environmental → Aquatic → Marine	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.47%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.60%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026836	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-10 (SPAdes)	Environmental	Open in IMG/M
3300026867	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-12 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_116191552	3300000890	Soil	SGPAVFHHSARHRCAHMAVDRFIRANAPPRLRCVRHHRPRTGGLPIRVEGRIRVRVHTPLQLSRNAIVLRHSQIAEIQLSHACGTSETAERSSGIGTIYETRIICGMETICGTQTISEMETIIYGETGKNTFSLTNQGIGIVTGTATATIGGMATNAPSSMGRG*
JGI10216J12902_1097081201	3300000956	Soil	PRRFTLRCGPAVFHRSGRRRCGHTAVDRFIQANAIPHLGCVRHDRPRTGGLSIRVAVRSCGPVHTPWQLSRNAIVWRHSRIAEIQLSHACGTSETAERSSGMETTYETRTIRGMETIYGVQSISEMETICGTETARGTQTICGMERIICVVTGKNTFSLTAQGIGVAIGTAIATTGGMVTDA
Ga0066395_102881892	3300004633	Tropical Forest Soil	RRCGHRAVDRFIQANVLPRLGCGRHHRSRTGRLFIRVEVRSRARVHTPWQLSRERAVCSRHGCLYSNAIVSRHSPIAEIQLSHACGTSKTPEPSFGVETIYETRTICGMETTCGTQTIRVMERTICVLTGKKMFLLAAQGIGIAIGTVMATTGGMATDAPSLMERG*
Ga0066673_106410392	3300005175	Soil	ANAIPRLEGVRHHRPRIGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRITEIQLSQTRGTSETPEPSSGTEIISEMQTIFGMETIIFVPAGKKTFSDSAQGIGIATGTVTVTIGGMVTDAASLMDRG*
Ga0066676_108746372	3300005186	Soil	RGNATRRLECVRHHRPRTGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRIAEVQLSQAGGTSETPECSSAMETISEMQTISEMQTIFEMETMSEMQTIIFVVTGKNTFSGSAQEIGIATGTVTATTGGMVTDAASLTARG*
Ga0065712_100517742	3300005290	Miscanthus Rhizosphere	AVPLRFILRCGPAVLHRSARHRCGHTAAGRFIQANALRRLGCGRHHPSRTGGLFIQIDLWLRVPVHTRWQLSRNAIVSRQWRIAEIQLSHAFGTSETHNSGMEIIFETRTISGIETIICAVTGKNTFSLTPQGIGIAIGTAIATTGGMVTDAPLLMERG*
Ga0070687_1000561624	3300005343	Switchgrass Rhizosphere	VFTQQEGHLTEAQLHVVPRRFTLRCGPAVFHHSARRRCGRTPVDRFIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG*
Ga0068853_1005952001	3300005539	Corn Rhizosphere	LRAWSRLLKRTQEVFTQQEGHLTEAQLHVVPRRFTLRCGPAVFHHSARRRCGRTPVDRFIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG*
Ga0066692_108035241	3300005555	Soil	RRFMLRCGPAVFHRSARRRCGHTAIDRLIPGNAIPRLACVRHRRPRTGSLSIQIEVRSRARVHTPWQLSRNAIESRHSRIAEIQLSHACGTSETPECSSGMETIYGTQTIFGMQTISGTETISEMETTNCAVTGKHTFSLTSHGIGMAIGTAIATIGGMVTDAPSLMDRG*
Ga0066670_110382872	3300005560	Soil	NAIPRLEGVRHHRPRIGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRITEIQLSQTRGTSETPEPSSGTEIISEMQTIFGMETIIFVPAGKKTFSDSAQGIGIATGTVTVTIGGMVTDAASLMDRG*
Ga0066694_104812901	3300005574	Soil	TGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRITEIQLSQTRGTSETPEPSSGTEIISEMQTIFGMETIIFVPAGKKTFSDSAQGIGIATGTVTVTIGGMVTDAASLMDRG*
Ga0066706_109786331	3300005598	Soil	GHPAVDRFIQASALPRLGCVRHHRPRTGGLSIRVEVRSRVPVHTPWQRSRNAIVSRHSRIAEIQLSHACGTSETPECSSGMETIYGTQTIFGMQTISGTETISEMETIICGATGKNTFSLTNQGIGIATGTATATIGGMATNAPSLMDRG*
Ga0066905_1000463881	3300005713	Tropical Forest Soil	LHLMVRRFSLRRGPVVFHRSGRRRCGHRAVDRFIQDNALPRLGCVRHHRPRTGALSIRVEVRSRARVHTPWQLSRKAIESHHSPIAEIQLSHACGTSETPERSSGMETIYETRTICGMETTYETQTICGMETVFGMQTISETETISEMERIICAVTGKNTSWLTAQGIGIATGTAIATIGGMAINAPSLMDRG*
Ga0066903_1034898422	3300005764	Tropical Forest Soil	LFIRVEVRSRARVHTPWQLSRERAVCSRHGCLYSNAIESRHSPIAEIQLSHAYGTSETTERSSRMETIYETRTICGMETICGMQTISEMETICGTQTISEAETIRGVERTNCVVTGKNTFSVNAQGIGIATGIATATIGGMATNAPSLMERG*
Ga0068858_1012895331	3300005842	Switchgrass Rhizosphere	AVFHRSARHRCAHMAADRCIRANAPPRLRCVRHHRPRTGGLPIRVEGRIRVRVHTPLQLSRNAIVLRHSQIAEIQLSHARGTSETPECSFGTETIYGTQTISEMETICGMEGTICVVTGKNTFSLVAQGIGIAIGTAIATTGGMVTDAPSLMERG*
Ga0068862_1004477902	3300005844	Switchgrass Rhizosphere	LLRARSRLLKRTQEVFTQQEGHLTEAQLHVVPRRFTLRCGPAVFHHSARRRCGRTPVDRFIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG*
Ga0081455_100907591	3300005937	Tabebuia Heterophylla Rhizosphere	QLRAAPRQFTLRCGRVVFHRSARRLCGHREVDRFIQANVLPRLGCVRHRRPRTGALSIRVELRSRARVHTPWQLSRNAIESRHSPIAEIQLSHACGTSETSERSSGMETIYETRTICGMERTICVVTGKNTFSLTAQAIGIAIGTAIVTTGGMVTNAPSLMERG*
Ga0066651_101647101	3300006031	Soil	MLRCGPAVFRHSARRRCGHTAVDRFIQANALPRLGCVRHHPSRIGGLFIQIDLWLRVPVHTRWQLSRNAIVSRQWRIAEIQLSHAFGTSETSERNSRMEIIYGTLTISGTETTCETQTISGIETIICGMTGKKTFSLTPQGIGIAIGTAIATTGGMVTDALLLMERG*
Ga0066651_102969411	3300006031	Soil	ATRRLECVRHHRSPIGGLTFIRVEVRSRVRVHTPWQRSRKAIVSRHSRITEIQLSQTCGTSETPGPSSGTETISEMQTISEMETIIFVPAGKKTFSDSAQGIGIATGTVTAIIGGMVTDAASLMDRG*
Ga0070715_102929162	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LGAAPRLFTLRCGPAVFHRSARRRCGHTAVDRFIQDNALPRLGCVRHHRPGTDGLSIRVEIRSRVRVHTPWQLSRNAIVSRRSRLAEIPLSHACGTSETPERSSVMETIRGTQTISKMEITCGTETISEMETIIYGETGKNTFSLINQGIGIATGTATATIGGMATNAPSLMDRG*
Ga0070716_1008742212	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FTLRCGPAVFHRSARRRCGHTAVDRFIQANALPRLGCVRHHPSRTGGLFIQIDLWLRVPVHTRWQLSRNAIVSRQWRIAEIQLSHAFGTSETHNSGMEIIYGTRTISGIETIVCGVTGKNTFSLTPQGIGIAIGTAIATTGGMVTDALLLMERG*
Ga0066658_101713872	3300006794	Soil	PPGRSLRARSRLLKRTQEVFPQRKRHLTEGQLHAVPRRLTLRCGPAVFHRSARRRCGHPAVDRFIQANAMPRLGCVRHHPPRTGGLFIRIEVRSRVPVHTRWQLSRKAIVSRHPQIAETQLSHACGTSETPERSSGMETIYGTQTIFGIQTICGTETISEMETIIYGGTGKNTFSLTNQGIGIATGTATATTNGMVTDAPSLMDCG*
Ga0066659_114434051	3300006797	Soil	RVEVRSRVRVHTRWQLSRKAIVSRHSRIAEVQLSQADGTSETPECSSAMETISEMQTIFEMETMSEMQTIIFVVTGKNTFSGSAQEIGIATGTVTATTGGMVTDAASLTARG*
Ga0075424_1005642982	3300006904	Populus Rhizosphere	PSRLLRARSRLLKRTQELFPPRKGKGQLHAVPRRFMLRSAPAVFHRSARPRCGHTAVDRFIQANALPRLGCGRHHPSRTGGLFIQIDLWLRVPAHTRWQLSRNAIVSRQWRIAEIQLSHAFGTSEPSERNSGTEIIYGTRTISGTETTCRTISGMETIICGMTGKNTFSLTPQEIGIAIGTAIATTGGMVTDAPLLMERG*
Ga0075424_1014079952	3300006904	Populus Rhizosphere	RRRCGHRVVDRFIQANVRRCGQTAVDRFIQANALPRLGCVRYHRPRTGRPFIRVEVRSRARVHTPWQLFREPAVCSRHGCLYSNAIVSRHSPIAEIQLSQLCGTSETRERSSRMETIYETRTICGMETICGKQTISEMETIRGTQTICGMERTNCVVTGKTTFSVNAQGIGIATGIATATIGGMATNAPSLMERG*
Ga0066709_1006308331	3300009137	Grasslands Soil	MLRCGQAVFYRSARRRCGHTAIDRLIPGNAIPRLACVRHRRPRTGSLSIQIEVRSRARVHTPWQLSRNAIESRHSRIAEIQLSHARGTSETPERSSGMETIYGMQTICGTRTICGMETIFETQTTVCGVIGKNTFSLTNQGIGIAAGTATAIIGGMATNALSLMDRG*
Ga0114129_102050801	3300009147	Populus Rhizosphere	LPSRLLREQSRLLKRTQELFPPREAHLAEGRLRAVPRRFMLRCGPVVFHRSARRRCGHTAVDRFIQANALPRLGCVRHHPSRTGGLFIQIDLWLRVPAHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSETHNSGMEIIYETRTISGTETTYRTIRETIICGVTGKNTCSLMPQGIGIAIGTAIATTGGMVTNAPLLMERG*
Ga0075423_103955901	3300009162	Populus Rhizosphere	MLRCGPAVFHRSAQRRCGHTAVDRFIQANALPRLGCVRHHPSRTGGLFIQIDLWLRVPGHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSESSERNSGMEIIYGTRTISGTETTCRTISEIETITCGMTGKNTFSLTPQGIGIAIGTAIATTGGMVTDAPLLMERG*
Ga0075423_118665551	3300009162	Populus Rhizosphere	VRSRVRVHTPWQLSREPAVRSRHGCLYSNAIVSRHLPIAEIQLSHACGTSETTERSSRMETIYETRTICGMEIICGAQTISEMETICGTQTICGMERTICVVTGKNTFSVNAQGIGIATGIATATIGGMATNAPSLMERG*
Ga0105237_124810981	3300009545	Corn Rhizosphere	KQNCLPSRLLRARSRLLRRTQELFPPRKGEGQLHAVPRRCMLRCGPAVLHRSARHRCGRTAVDRFIQANALPRSGCVRHHPSRTGGLFIRVDLWSRVPVHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSETHNSGMETTCGARIIFGIETIICGVTGKNTFSLTPQGIGIAIGTAI
Ga0126382_121688431	3300010047	Tropical Forest Soil	DRFIQANALPRLRCVRYHRPRTGRPFIRIEVRSRARVHTPWQLSPKAIESRHSSIAEIQLSHACGTNETPERSSRMETIYETRTICGTQTISEMETTCGTQTIRVMERTICVLTGKKMFLLTAQGIGIAIGTVIATTGGMATDAPSLMERG*
Ga0134109_100746301	3300010320	Grasslands Soil	RLECVHHHHPRTGGLTLIRIEVRSRVRVHTRWQLSRKAIVPRHSRITEIQLSQTRGTSETPEPSSGTEIISEMQTIFGMETIIFVPAGKKTFSDSAQGIGIATGTVTVTIGGMVTDAASLMDRG*
Ga0134063_103466791	3300010335	Grasslands Soil	PSRTGGLFIRVDLWLRVPVHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSETSERNSEMEIIYGTRTISGTETTCRTISGIATIICAMTGKNTFSLTPQGIGIAIGTAIATTGGMVTDAPSSMERG*
Ga0134071_103985642	3300010336	Grasslands Soil	MLIRIEVRSRARAHIRWQASRKAIVSRDSRIAEIQLSQMCGPSETPEPSSGMEIISEMQTTSGIETISETATIIFVVTGKNTFSRSARGIGIATGTVTVTIGGMVTDAASLMDRG*
Ga0134062_102962791	3300010337	Grasslands Soil	MQANAIPRLERVRHHHLRTGGLTFIRIEVRSRGRVHTRWQLSRKAIVSRHSRITEIQLSQTRGTSETPEPSSGTEIISEMQTIFGMETIIFVPAGKKTFSDSAQGIGIATGTVTAIIGGMVTDAASLMDRG*
Ga0126377_119353222	3300010362	Tropical Forest Soil	RLGCVRYHRPRTGRPFIRVEVRLRAPVHTPWQLSRKAIESRHSPIAEIQLSHACGTSETPERSSRMETIYETRTICGMETICGTQPISEMKTIRGTQTICGMERTISVVTGKNTFSLNAQGIGIAIGTAIATTGGMATDAPSLMERG*
Ga0126381_1027739171	3300010376	Tropical Forest Soil	RNVIVSRHSRITETQLSQTCGASEIPEPSYGMEIISEMQTLFGIQTISRTQTICKTETIIFVMAGKTTFSGSAQGIGIATGTVTAIIGGMVTDAASLTVRG*
Ga0126381_1029542111	3300010376	Tropical Forest Soil	ANALPRLGCVRYDRPRTGRPFIRVEVRSRARVHTPWQLSPKAIESRHSSIAEIQLSHACGTSETPERSSRMETIYATQTICGPQTIYEMETTCGTQTIRVMERTICVLTGKKMFLLTAQEVGIAIGTAIATIGGMVTNAHSLMERG*
Ga0134126_118717952	3300010396	Terrestrial Soil	SIRVEVRSRVRVHTPWQLSRNAIVSRRSRLAEIPLSHACGTSETPERSSVIETICGTQTISKMEITCGTETISEMETIIYGETGKNTFSLINQGIGIATGTATATIGGMATNAPSLMDRG
Ga0137383_113652881	3300012199	Vadose Zone Soil	RVHTPWQLSRKAIESRHSPIAEIQLSHACGTSKTPERSSRMETIYETRTICGMETICGTQTISEMETIRGTQTICGMERTICVVTGKNTFSLNAQGIGIAIGTAIATTGGMVTDAPSLMERG*
Ga0137362_113284351	3300012205	Vadose Zone Soil	RERTAVDQFTRGNATRRLECVRHHRLRTGGLTFIRVEVRSRVRVHTRWQLSRKAIVTRHSRIAEIQLSQAGGTSETPECSSAMETISEMQTFFEMQTIFGMETIIFVVTGKNTFSDSAQGIGIATGTVIATTGGMVTDAALLMDRG*
Ga0137380_105659171	3300012206	Vadose Zone Soil	RHHRPRTGGLSIRVKVRSRARVHTPWQRSRNAIVSRHSRIAETQLSHACGTSETPECSSGMETIYGTQTIFGMQTISGTETISEMETIICGATGKNTFSLTNQGIGIATGTATATIGGMATNAPSLMDRG*
Ga0137378_102670952	3300012210	Vadose Zone Soil	MLRCGPAVFHRSARRRCGHTAIDRLIPGNAIPRLACVRHRRPRTGSLSIQIEVRSRARVHTPWQLSRNAIESRHSRIAEIQLSHARGTSETPERSSGMETIYGTQTIFGMQTIGGTETISEMETTNCAVTGKNTFSLTSHGIGMAIGTAIATIGGMVTDAPSLMDRG*
Ga0137370_109575271	3300012285	Vadose Zone Soil	VRHHRPRTGGLSIRVEVRSRARVHTPWQRSRNAIVSRHSRIAEIQLSHACGTSETPECSSGMETIYGTQTIFGMQTISGTEIISEMETIICGATGKNTFSLTNQGIGIATGTATATIGGMATNAPSLMDRG*
Ga0137369_104186561	3300012355	Vadose Zone Soil	CGPAVLHRSARRRCGHTAVDRFIQANALPRLGCVRHHPSRTGGLFIRVDFWSRVPVHTRWQLSRNAIVSRQWRIAEIQLSHAFGTSETSERNSRMEIIYGTRTISGTETTCRTISGIETIICGMTGKNTFSLTPQAIGIAIGTAIATTGGMATDALLLMERG*
Ga0137368_108305531	3300012358	Vadose Zone Soil	RQFMLRCGPAVLHRSARRRCGHTAVDRFIQANALPRLGCVRHHPSRTGGLFIRVDFWSRVPVHTRWQLSRNAIVSRQWRIAEIQLSHAFGTSETSERNSRMEIIYGTRTISGTETTCRTISGIETIICGMTGKNTFSLTPQAIGIAIGTAIATTGGMATDALLLMERG*
Ga0137385_111699942	3300012359	Vadose Zone Soil	IQANAIHRLECVRHHHLRTGGLTFLRVEVRSRVRVHTPWQRSRKAIVLRHSRITEIELSQTCGTSETPGPSSGTETISEMQTIFEMGTIIFVVTGKNTFSRGAQGIGIATGTVTVTIGGMVTDAASLTDRG*
Ga0137360_117763521	3300012361	Vadose Zone Soil	TGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRIAEVQLSQAGGTSETPECSSAMETISEMQTIFEMETISGMQTISEMETIIFVVTGKNTFSGSAQEIGIATGTVTVTIGGMVTDAASLTDRG*
Ga0134050_13741861	3300012407	Grasslands Soil	IQANAIHRLECVRHHRPRTGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRIAEIQLSQACGTSETPEASSGMETISETQIISEMETIIFVPAGKNTFSRNAQAIGIATGTVTAIIGGMVTGAASLMARG*
Ga0157291_101353672	3300012902	Soil	FIQANALPRLGCVRYHRPRTGRPFIRVEVRLRARVHTPWQLSRKAIESRHSPIAEIQLSHACGTSETPERSSRMETIYETQTICGMERTICVVTGKNTFSLTAQGIGIAIGTAIATTGGMVTNAPSLMERG*
Ga0157282_102587891	3300012904	Soil	EPAVRSRHGCLYSNAIVSRHSPIAEIQLSHACGTSETPERSSGMETIYRTQTIFEMQIICGMEIICGAQTISEMETICGTQTTSEMETIICGVTGKNTFSLTPQGIGIAIGTAIATTCGTVTNALLLMERG*
Ga0157298_100355661	3300012913	Soil	TAVDRFIQANAIHRLECVRRHRLRTAGLTFLRVEVRSRVPVHIRWQLSRNAIVSRHSRIAGIQLSHACGTSETPECSSGMETIYGTQTICGTQTIICGVTGKNTFSLTAQGVGIATGTATATIGGMATNAPSLMDRG*
Ga0137413_105601482	3300012924	Vadose Zone Soil	HHRPLTGGLSIRVEVRSRVPVHTPWQPSRNAIVSRHSRIAEIQLSHACGTSETPECSSGMETIYGTQTIFGMQTISGTETISEMETIICGATGKNTFSLTNQGIGIATGTATATIGGMATNAPSLMDRG*
Ga0137404_118147731	3300012929	Vadose Zone Soil	PRLGCVRRHPSRTGGLFIRVDLWSLVPVHTRWQLSRNAIVSRQSRIGEIQLSHAFGTSETHNSGMEIIYGTRTISGIETIICGMTGKNTFSLTLREIGIAIGTAIATTGGMVTDAPLLMERG*
Ga0164303_108782802	3300012957	Soil	TGRPFIRVAVRSRVPVHTPWQLSREPAVCSRHGCLYSNAIVSRQSRIAEIQLSHARGASKTPEPSSGMEAIYETRTICGMETICGTQTISEMETIRGTQTICGMERTICVVTGKNTFSVNAQGIGIATGIATATIGGMATNAPSLMERG*
Ga0134077_101275621	3300012972	Grasslands Soil	EVRSRVRVHTRWQLSRKAIVSRHSRITEIQLSQTRGTSETPEPSSGTEIISEMQTIFGMETIIFVPAGKKTFSDSAQGIGIATGTVTVTIGGMVTDAASLMDRG*
Ga0164305_111146672	3300012989	Soil	PLTGRLSIRVEVRSRARVHTPWQLSRESAVCSRHGCLYSNAIVSRHSPIAEIQLSHACGTSETPEPNSGMETIYGTQTICGTQTISEMETIICGGTGKNTFSLTAQGIGIAIGTAIATTGGMVTDAPLLMERG*
Ga0157372_105184743	3300013307	Corn Rhizosphere	RTGGLSIRMEVRLRVRVHTPLQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG*
Ga0173483_102015561	3300015077	Soil	RPRTGGLSIRVEVRSRVPVHIRWQLSRNAIVSRHSRIAEIQLSPACGTSETPEPNSGMETIYGMQTICGTQTISEMETIICGVTGKNTFSLTAQRIGIATGTATAITGGMATNAPSLMDRG*
Ga0173483_105811262	3300015077	Soil	RPRTGGLSIRVEVRSRVPVHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSETHNSGMEIIYETRTTSGMETTCGARIIFGIETIICGVTGKNTFSLTPQGIGIAIGTAIATTGGMVTDAPLLMERG*
Ga0132258_104773555	3300015371	Arabidopsis Rhizosphere	MLRCGPAVFHRSARRRCGHTAIDRLIPGNAIPRLACVRHRRPRTGSLSIRIELRSRARAHTPWQLSRNAIESRHSRIAEIQLSHARGTSETPERSSEMETICGTQTICGMETIYETQTTVCGVIGKNTFSLTNQGIGIATGTATAIIGGMVTNALSLMDRG*
Ga0182038_112055171	3300016445	Soil	GCLYSNAIESPHSRIPEIQLSQACGTSKIPEPSFGMETIYETRTIYGMETTCGTQTIRVMERTICVLTGKKMFLLAAQGIGIAIGTVIATIGGMATDAPSLMERG
Ga0134112_101835401	3300017656	Grasslands Soil	MLIRIEVRSRARVHIRWQASRKAIVSRDSRIAEIQLSQMCGPSETPEPSSGMEIISEMQTTSGIETISETATIIFVVTGKKTFSRSAQGIGIATGTVTVTIGGMVTDAASLMDRG
Ga0184604_101755871	3300018000	Groundwater Sediment	NCLPLRLLRARSRLLKRTQELFPPRKGEGQLHVVPRRFTLRCGPAVFHRSARRRCGHTAVDRFIQANALPRLGCVRHHPSRTGGLFIQIDLWLRVPAHTRWQLSRNAIVSRQSRIGEIQLSHAFGTSETHNSGMEIIYGTQTISGIETIICGMTGKNTFSLTPQGIGIAIGTAIATTGGMVTDALLLMERG
Ga0184605_101171341	3300018027	Groundwater Sediment	LRARSRFLKRIQELFPPRKGEGQLHAVPRLFMLRCGPAVFHRSALRRCGHTAVDPFIQANALPRLGCVRHHPSRTGGLLIQIDLWLRVPVHTRWQLSRNAIVSRQSRIAEIQLSHALGTSETHNSGMEIIYGTRTISGIETIICGVTGKNTFSLTPQAIGIMIGTAIATTGGMVTDALLLMERG
Ga0184621_102253841	3300018054	Groundwater Sediment	CVRRHPSRTGGLFIRVDLWSLVPVHTRWQLSRNAIVSRQSRIGEIQLSHAFGTSETHNSGMEIIYGTRTISGIETIICAVTGKNTFSLTPQGIGIAIGTAIATTGGMVTDAPLLMERG
Ga0184609_102176582	3300018076	Groundwater Sediment	GHLAEVQLHAVPRPFTLRCGPAVFHRSARRRCGHKAVDRFIQANALPRSGCVRHHRPRTSGLSIRVEVPLRVRVHTRWQLSRNAIVSRHSRIAETQLSHACGTSETPECGSGMETIYGTQTISEMEAICGTETISEMETITCVVTGKNTFSLTAQGIGVAIGTAIATSGGMVTDAPSLMDRG
Ga0066667_120616131	3300018433	Grasslands Soil	RVEVRSRVRVHTRWQLSRKAIVSRHSRIAEVQLSQAGGTSETPECSSAMETISEMQTIFEMQTIFEMETMSEMETIIFVVTGKNTFSGSAQGIGIATGTVTATTGGMVTDAASLTARG
Ga0066669_115106961	3300018482	Grasslands Soil	RIEVRSRARAHIRWQASRKAIVSRDSRIAEIKRPQTSGTGGIPEASSAMEIIFGMEIISEMQTTSGIETISETATIIFVVTGKKTFSRSAQGIGIATGTVTVTIGGMVTDAASLMDRG
Ga0173481_102143071	3300019356	Soil	HRSVRRRCGHRAVDRFIQANAIPRLGCVRHHRPRTGRPFIRVEVRSRARVHTPWQVSRKAIESRHSPIAEIQLSHACGTSETTERSSRMETIYETRTICGMEIISEMETICGTQTICGTQTICGMERTICVATGKNTFSVNAQGIGIATGIATATIGGMATNAPSLMERG
Ga0173481_103599242	3300019356	Soil	LAEGQLHAVARRFMLRCGPAVLHRSARRRCGHTAVDRFIQANALPRLGCVRHHPSRTGGLLIRVDLWSRVPVHTRWQLSRNATVSRQSRIAEIQLSHAFGTSETHNSGMEIIYETRTTSGMETTCGARIIFGIETIICGVTGKNKFSLSAQGIGIAIGTAIATTGGMVTDVPLLMERG
Ga0193705_10121854	3300019869	Soil	DRFIQANAIRPLECVRHRRPRTDGLTFIRVEARSRVPVHSRPQLSDKGIVSRRSRITEIQRVQAYGTSETPEPSSGMETISGMETISGTETIVFVATGKNTFSGSVQGTGIAIGTVTATTGGMVTDAPSLADHG
Ga0193700_10442361	3300019873	Soil	SALRRCGHTVAVDRFIQANALPRLGCVRHHPSRTGGLLIQIDLWLRVPVHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSETHNSGMEIIYGTRTISGIETIICGVTGKNTFSLTPQAIGIMIGTAIATTGGMVTDALLLMERG
Ga0193715_10851172	3300019878	Soil	EAQLHAVPRRFTLRCGPAVFHRSARRRCGHTAADRFIQANALPRLGCVRHQRPRTSGLFIRVEVRLRVRVHTRWQLSRNAIVSRHSRIAEIQLSHACGTSETPECSSGMETIFGTQTIFGMQTIAGTETISEMETTNCAVTGKNTFSLTNQGVGIATGIETATIGGMATNAPSLMDRG
Ga0193713_10517773	3300019882	Soil	RRLECVRHHRLRTGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRITEIQLSQARGTSEIPECSSGMETISEMGTISEMQTIFGMETIFGMQTISGMETLSEMGTIIFVVTGKNTFSRSAQGIGIATGTVTVTIGGMVTDAASLMDRG
Ga0193733_10591073	3300020022	Soil	WQLSRKAIVLRHSRITEIQLSQARGTSEIPECSSGMETISEMGTISEMQTIFGMETIFGMQTISGMETLSEMGTIIFVVTGKNTFSRSAQGIGIATGTVTVTIGGMVTDAASLMDRG
Ga0222622_100055968	3300022756	Groundwater Sediment	VAVDRFIQANALPRLGCVRHHPSRTGGLLIQIDLWLRVPVHTRWQLSRNAIVSRQSRIAEIQLSHALGTSETHNSGMEIIYGTRTISGIETIICGVTGKNTFSLTPQAIGIMIGTAIATTGGMVTDALLLMERG
Ga0207666_10706362	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	FIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG
Ga0210142_10001442	3300025552	Natural And Restored Wetlands	MAVDRFIQANAIPRLPCVRYDPPRTAGLSIRVEIRSRGPVHTPWQLSRNKIVSRDSRIAETQRSHVCGTSETPEPNSGMETIYGTQTISEMETTCGKRTIRGMERTNCVATGKDTFSLIAQGIGIAIGTAIAITGGMVTNVPSLVDRG
Ga0210142_10357391	3300025552	Natural And Restored Wetlands	QANAIPRLPCVRYDPPRTAGLSIRVEIRSRGPVHTPWQLSRNAIVSRHSRIAETQLSRACGTSETPERSSGMETISGTQTISEMGRICGTRTISGMETIICVVTGKITFSLTAQGIGIATGTAIATTGGMATNAPSLMDRG
Ga0207692_106944211	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LSRLLRARSRLLKRTQEVFRQRKGHLAEAQLRAAPRLSTLRCGPAVFHRSARRRCGHTAVDRFIQDNALPRLGCVRHHRPGTDGLSIRVEIRSRVRVHTLWQLSRNAIVSRRSRLAEIPLSHACGTSETPERSSVIETICGTQTISKMEITCGTETISEMETIIYGETGKNTFSLINQGIGIATGTATATIGGMATNAPSLMDRG
Ga0207681_102462673	3300025923	Switchgrass Rhizosphere	LLRAWSRLLKRTQEVFTQQEGHLTEAQLHVVPRRFTLRCGPAVFHHSARRRCGRTPVDRFIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGASEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG
Ga0207659_102974061	3300025926	Miscanthus Rhizosphere	HRSARHRCAHMAADRCIRANAPPRLRCVRHHRPRTGGLPIRVEGRIRVRVHTPLQLSRNAIVLRHSQIAEIQLSHARGTSETPECSFGTETIYGTQTISEMETICGMEGTICVVTGKNTFSLVAQGIGIAIGTAIATTGGMVTDAPSLMERG
Ga0207659_104441093	3300025926	Miscanthus Rhizosphere	CVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG
Ga0207701_102179471	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TLRCGPAVFHRSAQRRCDHPAVDRFIQANALPRLGCVRHHPSRTGGLFIQIDLWSRVPVHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSETHNSGMEIIYETRTTSGMETTCGARIIFGIETIICGVTGKNTFLLTPQGIGIAIGTAIATTGGMVTDVPLLMERG
Ga0207706_100460801	3300025933	Corn Rhizosphere	LLRAWSRLLKRTQEVFTQQEGHLTEAQLHVVPRRFTLRCGPAVFHHSARRRCGRTPVDRFIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG
Ga0207639_107098802	3300026041	Corn Rhizosphere	VPRRFTLRCGPAVFHHSARRRCGRTPVDRFIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG
Ga0209268_11040161	3300026314	Soil	IQANAIHRLECVRHHHLRTGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRIAEVQLSQAGGTSETPECSSAMETISEMQTIFEMETMSEMQTIIFVVTGKNTFSGSAQEIGIATGTVTATTGGMVTDAASLTARG
Ga0209155_10847363	3300026316	Soil	QANAIPRLEGVRHHRPRIGGLTFLRVEVRSRVRVHTRWQLSRKAIVSRHSRITEIQLSQTRGTSETPEPSSGTEIISEMQTIFGMETIIFVPAGKKTFSDSAQGIGIATGTVTVTIGGMVTDAASLMDRG
Ga0209152_101659562	3300026325	Soil	LLKRTQEVFTQWQGDLTEAQLHAAPRRFTLRSGPAVFHRFVRCRCGQPAVDRFIQASALPRLGCVRHHPPRTGGLFIRIEVRSRVPVHTRWQLSRKAIVSRHPQIAETQLSHACGTSETPERSSGMETIYGTQTIFGIQTICGTETISEMETIIYGGTGKNTFSLTNQGIGIATGTATATTNGMVTDAPSLMDCG
Ga0209057_11907101	3300026342	Soil	RTAGLTFLRVEVRSRVRVHTRWPLSHKAIVSRHSRIAEIQLSQACGTSETPEASSGMETISETQIISEMETIIFVPAGKNTFSRNAQGIGIATGTVTATTGGMVTVAASLMDRG
Ga0209058_12767431	3300026536	Soil	FECVRHHHLRTAGLTFLRVEVRSRVRVHTRWPLSHKAIVSRHSRIAEIQLSQACGTSETPEASSGMETISETQIISEMETIIFVPAGKNTFSRNAQGIGIATGTVTATTGGMVTVAASLMDRG
Ga0209157_10962902	3300026537	Soil	LLRARSRLLKRTQEVFTQWQGDLTEAQLHAVPRRFTLRCGPAVFHRSAQRRCGHPAVDRFIQANALPRLGCVRPHRPRTGGLSIRVEVRLRVPVHTRWQLSRNAIVSRHSRIAEIQLSHACGTSETPERSSGMETICGTQTIFGMQTISGTETISEMETIICGVTGKNTFSLTNQGIGIATGTATATIGGMATNAPSLMDRG
Ga0209577_108240342	3300026552	Soil	RLPVRVHTLRQPSDNPVTVIVSRDFRIIEIQRPQACGTSKIPGASSRMETISEMQTTSGIETISETTTIIFVVTGKNMWSRSARGIGIAIGTVTVTIGGMVTDAASLMDRG
Ga0207612_10032791	3300026836	Soil	RSECVRHHRPRTGGLSLRVEVRSRVPVHTPWQLSRNAMVSRHSRIAEIQLSHVCGTSETTERSSGMETIFGTQTTCAMEIIYETQTISEMEIIICGVTGKNMLPVTAQEIGIATGTATAIIGGMDTNAPSLMDRG
Ga0207475_10060621	3300026867	Soil	QANATPRLGCVHHHPPRTGGLSIPVEVRSRVPVHTRWQLSRNAIVSRQSRIAEIQLSHAFGTSETHNSGMEIIYETRTTSGMETTCGARIIFGIETIICGVTGKNTFSLTPQGIGIATGTATATIGGMAINAPLLMDRG
Ga0268265_108431401	3300028380	Switchgrass Rhizosphere	LSRLLRAWSRLLKRTQEVFTQQEGHLTEAQLHVVPRRFTLRCGPAVFHHSARRRCGRTPVDRFIQANAIPRLGCVRHHRPRTGGLSIRVEVPLRVRVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSEKAERSSGMATIYGTQTLCGMETTICVLTGKNTFPRSAQEIGIATGIVAVIIGGMATNAPSLMDRG
Ga0307310_105918452	3300028824	Soil	CVRHRRPRTDGLTFIRVEARSRVPVHSRPQLSDKGIVSRRSRITEIQRVQAYGTSETPEPSSGMETISGTETIVFVATGKNTFSGSVQGTGIAIGTVTATTGGMVTDAPSLADHG
Ga0307312_104958982	3300028828	Soil	RCGHTAVDRFIQANALPRLGCVRRHPSRTGGLFIRVDLWSLVPVHTRWQLSRNAIVSRQSRIGEIQLSHAFGTSETHNSGMEIIYGTRTISGIETIVCGMTGKNTFSLTPQGIGIAIGTAIATTGGMVTDALLLMERG
Ga0307308_101959221	3300028884	Soil	KQNCLPSRSLRARSRLLKRTQELFPPRKGEEQLHAVPRRFMLRCGTAVFHRSALRRCGHTAVDRFIQANALPRLGCVRRHPSRTGGLFIRVDLWSLVPVHTRWQLSRNAIVSRQSRIGEIQLSHAFGTSETHNSGMEIIYGTRTISGIETIICAVTGKNTFSLTPQGIGIAIGTAIATTGGMVTDAPLLMERG
Ga0170834_1109972932	3300031057	Forest Soil	GSATRRLECVRRHRLRTGGLMFLRVEVRSRVLVHTRWQLSRKAIVSRHSQITEIQLSQARGTSETPECSSGMETIFGMQTISGMETISEMGTIIFVVTGKNTFSRSAQGIGIATGTITAIIGGMVTDAASLMVRG
Ga0170823_145908752	3300031128	Forest Soil	AYVRHHRSRTGGLTVIRIEVRSRVRGRTRSQPSRKEIALRHSRITEIKRQQWSGIGGLPETSSGIEAIFRTQTIFEMGTIISVVIGTNTFSRSAQGIGIATGTITAIIGGMVTDAASLTDRG
Ga0170824_1206751491	3300031231	Forest Soil	RLGCVRHHPPRTGGLSIRVEVRSRARVHTPWQLSRKAIESRHSPIAEIQLSHACGTSETPERSSRMETIYETRTICGMETICGTQTISEAETIRGMERTNCVVTGKNTFSVNAQGIGMAIGTAIATIGGMVTDARSLMERG
Ga0170820_138165302	3300031446	Forest Soil	FLRVEVRSRVRVHTRWQLSRKAIVLRHSRITETQQSQTCGTSETPECSSGMETISEMQTIFGMETLSEMGTIIFVVTGKNTFSRGAQGIGIATGTVTVTIGGMVTDAASLTDRG
Ga0170818_1072596971	3300031474	Forest Soil	NATRPSECVRRHRPRTGGLTFLRVEVRSRVRVHTRWQLSRKAIVLRHSRITETQQSQTCGTSETPECSSGMETISEMQTIFGMETLSEMGTIIFVVTGKNTFSRGAQGIGIATGTVTVTIGGMVTDAASLTDRG
Ga0170818_1144609912	3300031474	Forest Soil	SECVRHHRPRTGGLTFIRVAVRSRVRVHSWQQPSRKGIVSRHSRITEIKWPQTCGTSGIPEASSAMETIFGMEPIFEMETIVFVLTGTNTFSRSAQGIGIATGTITAIIGGMVTDAASLTDRG
Ga0306917_111298931	3300031719	Soil	RSRARVHTPWQLSRERAVCSRHGCLYSNAIESPHSRIPEIQLSHACGTSKIPEPSFGMETIYETRTICGMETTCGTQTIRVMERTICVLTGKKMFLLTAQEVGIAIGTATATIGGMVTDARSLMERG
Ga0310906_102100062	3300032013	Soil	LHAVPRRFTLRCGPAVFHRFARRRCGHKAVDRFIQANAIPRSECVRHHRPRTGGLSLRVEVRSRVPVHTPWQLSRNAIVSRHSRIAEIQLSHACGTSETPERSSGMETIYGTQTICEMETICGMGTICGTQTISEMETIICGVTGKNTFSLTAQGVGIATGTATATIGGMATNAPSLMDR
Ga0307471_1009986291	3300032180	Hardwood Forest Soil	HTAVDQFIQANAIPRLECVRHHRPRSGGLTLIRIEVRSRVRARTRWQISRKAIGSRHSRIAETQLSETCGTSETPEPSCGMEIISEMQTIFGMETIIFVAAGKTTFSDSAQGIGIATGTVTVTIGGMVTVAASLTDRG
Ga0306920_1025547852	3300032261	Soil	VAPRRFTLRCSPEVFHHSARRRYGYTAVARFIQANATPRLGCVRHYPPRTDRLFIRVEVRSRARVHTPWQLSRERAVCSRHGCLYSNAIESRHSRIPEIQLSHACGTSKIPEPSFGMETIYETQTICGAQTISEMETTCGTQTIRVMEKTICVLTGKKMFLLAARGIGIAIGTVIATTGGMATDAPSLMEHG
Ga0310811_107925692	3300033475	Soil	DRFIQANALPRLGCVRHHRPRTGGLFIRVEVRSRVPVHTPWQLSRNAIVSRHSRIAEIQLSPACGTSETPEPNSGMETIYGMQTICGTQTISEMETIICGVTGKNTFSLTAQGIGIATATATATIGGMATNAPSLMDRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences