NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F086180

Metagenome Family F086180

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086180
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 58 residues
Representative Sequence MQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESK
Number of Associated Samples 87
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 81.08 %
% of genes near scaffold ends (potentially truncated) 22.52 %
% of genes from short scaffolds (< 2000 bps) 95.50 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.784 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(62.162 % of family members)
Environment Ontology (ENVO) Unclassified
(96.396 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.694 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.23%    β-sheet: 22.89%    Coil/Unstructured: 69.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF09967DUF2201 18.92
PF12073DUF3553 12.61
PF13203DUF2201_N 6.31



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.78 %
All OrganismsrootAll Organisms16.22 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10064067All Organisms → Viruses → Predicted Viral1744Open in IMG/M
3300002484|JGI25129J35166_1069151Not Available649Open in IMG/M
3300002511|JGI25131J35506_1054976Not Available552Open in IMG/M
3300002514|JGI25133J35611_10013172All Organisms → Viruses → Predicted Viral3506Open in IMG/M
3300002514|JGI25133J35611_10120160Not Available750Open in IMG/M
3300002518|JGI25134J35505_10112708Not Available582Open in IMG/M
3300002519|JGI25130J35507_1049721Not Available837Open in IMG/M
3300004457|Ga0066224_1108966Not Available1135Open in IMG/M
3300005430|Ga0066849_10194598Not Available790Open in IMG/M
3300005514|Ga0066866_10292500Not Available557Open in IMG/M
3300005593|Ga0066837_10252119Not Available624Open in IMG/M
3300005603|Ga0066853_10102827Not Available971Open in IMG/M
3300006164|Ga0075441_10085279All Organisms → Viruses → Predicted Viral1220Open in IMG/M
3300006164|Ga0075441_10174987Not Available804Open in IMG/M
3300006736|Ga0098033_1120315Not Available742Open in IMG/M
3300006738|Ga0098035_1155737Not Available775Open in IMG/M
3300006738|Ga0098035_1216641Not Available636Open in IMG/M
3300006750|Ga0098058_1041820Not Available1308Open in IMG/M
3300006750|Ga0098058_1056673Not Available1097Open in IMG/M
3300006753|Ga0098039_1089283All Organisms → Viruses → Predicted Viral1063Open in IMG/M
3300006754|Ga0098044_1118578All Organisms → Viruses → Predicted Viral1076Open in IMG/M
3300006789|Ga0098054_1186052Not Available760Open in IMG/M
3300006789|Ga0098054_1223015Not Available684Open in IMG/M
3300006793|Ga0098055_1083388Not Available1256Open in IMG/M
3300006793|Ga0098055_1337709Not Available561Open in IMG/M
3300006921|Ga0098060_1061295Not Available1098Open in IMG/M
3300006921|Ga0098060_1087896Not Available887Open in IMG/M
3300006923|Ga0098053_1064022Not Available751Open in IMG/M
3300006923|Ga0098053_1092782Not Available610Open in IMG/M
3300006923|Ga0098053_1093155Not Available608Open in IMG/M
3300006923|Ga0098053_1119898Not Available528Open in IMG/M
3300006927|Ga0098034_1228125Not Available517Open in IMG/M
3300006929|Ga0098036_1046876All Organisms → Viruses → Predicted Viral1346Open in IMG/M
3300007276|Ga0070747_1311958Not Available540Open in IMG/M
3300007555|Ga0102817_1086240Not Available688Open in IMG/M
3300007963|Ga0110931_1200832Not Available595Open in IMG/M
3300008050|Ga0098052_1232642Not Available708Open in IMG/M
3300008050|Ga0098052_1282628Not Available629Open in IMG/M
3300008050|Ga0098052_1388321Not Available520Open in IMG/M
3300008216|Ga0114898_1069285All Organisms → Viruses → Predicted Viral1092Open in IMG/M
3300009409|Ga0114993_10876851Not Available644Open in IMG/M
3300009413|Ga0114902_1054728Not Available1145Open in IMG/M
3300009508|Ga0115567_10384766Not Available866Open in IMG/M
3300009512|Ga0115003_10544922Not Available678Open in IMG/M
3300009604|Ga0114901_1113520Not Available841Open in IMG/M
3300009786|Ga0114999_10129680Not Available2160Open in IMG/M
3300010150|Ga0098056_1121834Not Available885Open in IMG/M
3300010151|Ga0098061_1298628Not Available554Open in IMG/M
3300010153|Ga0098059_1120733All Organisms → Viruses → Predicted Viral1037Open in IMG/M
3300010155|Ga0098047_10396297Not Available517Open in IMG/M
3300017702|Ga0181374_1027337Not Available1004Open in IMG/M
3300017703|Ga0181367_1071128Not Available603Open in IMG/M
3300017703|Ga0181367_1093866Not Available516Open in IMG/M
3300017705|Ga0181372_1081396Not Available550Open in IMG/M
3300017708|Ga0181369_1039765Not Available1081Open in IMG/M
3300017709|Ga0181387_1110393Not Available564Open in IMG/M
3300017710|Ga0181403_1031955Not Available1110Open in IMG/M
3300017710|Ga0181403_1048340Not Available891Open in IMG/M
3300017713|Ga0181391_1121167Not Available586Open in IMG/M
3300017714|Ga0181412_1066917Not Available883Open in IMG/M
3300017715|Ga0181370_1027071Not Available745Open in IMG/M
3300017715|Ga0181370_1039128Not Available612Open in IMG/M
3300017718|Ga0181375_1024917Not Available1021Open in IMG/M
3300017718|Ga0181375_1035763Not Available837Open in IMG/M
3300017751|Ga0187219_1090598Not Available942Open in IMG/M
3300017755|Ga0181411_1219859Not Available529Open in IMG/M
3300017757|Ga0181420_1054976All Organisms → Viruses → Predicted Viral1271Open in IMG/M
3300017760|Ga0181408_1081301Not Available849Open in IMG/M
3300017760|Ga0181408_1168517Not Available561Open in IMG/M
3300017763|Ga0181410_1214414Not Available524Open in IMG/M
3300017764|Ga0181385_1254274Not Available526Open in IMG/M
3300017768|Ga0187220_1015546All Organisms → Viruses → Predicted Viral2292Open in IMG/M
3300017775|Ga0181432_1098376Not Available869Open in IMG/M
3300017775|Ga0181432_1146292Not Available724Open in IMG/M
3300017775|Ga0181432_1170081Not Available676Open in IMG/M
3300017775|Ga0181432_1238993Not Available572Open in IMG/M
3300017775|Ga0181432_1264712Not Available543Open in IMG/M
3300017775|Ga0181432_1276357Not Available532Open in IMG/M
3300017775|Ga0181432_1307907Not Available503Open in IMG/M
3300017782|Ga0181380_1055949All Organisms → Viruses → Predicted Viral1405Open in IMG/M
3300017786|Ga0181424_10329831Not Available630Open in IMG/M
3300020421|Ga0211653_10158048All Organisms → Viruses → Predicted Viral1000Open in IMG/M
3300020595|Ga0206126_10220385Not Available877Open in IMG/M
(restricted) 3300024520|Ga0255047_10578162Not Available563Open in IMG/M
3300025045|Ga0207901_1038157Not Available646Open in IMG/M
3300025052|Ga0207906_1012881All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300025066|Ga0208012_1014774Not Available1324Open in IMG/M
3300025078|Ga0208668_1049161Not Available784Open in IMG/M
3300025083|Ga0208791_1045361Not Available781Open in IMG/M
3300025108|Ga0208793_1147653Not Available624Open in IMG/M
3300025112|Ga0209349_1106712Not Available793Open in IMG/M
3300025114|Ga0208433_1156669Not Available532Open in IMG/M
3300025118|Ga0208790_1195755Not Available535Open in IMG/M
3300025122|Ga0209434_1136893Not Available674Open in IMG/M
3300025125|Ga0209644_1043199All Organisms → Viruses → Predicted Viral1023Open in IMG/M
3300025128|Ga0208919_1238356Not Available532Open in IMG/M
3300025131|Ga0209128_1076482All Organisms → Viruses → Predicted Viral1135Open in IMG/M
3300025131|Ga0209128_1225686Not Available513Open in IMG/M
3300025133|Ga0208299_1110517Not Available915Open in IMG/M
3300025141|Ga0209756_1016525All Organisms → Viruses → Predicted Viral4471Open in IMG/M
3300025267|Ga0208179_1048355Not Available969Open in IMG/M
3300025282|Ga0208030_1101082Not Available727Open in IMG/M
3300025873|Ga0209757_10162898Not Available701Open in IMG/M
3300027714|Ga0209815_1214113Not Available591Open in IMG/M
3300028196|Ga0257114_1076558All Organisms → Viruses → Predicted Viral1410Open in IMG/M
3300031519|Ga0307488_10336428Not Available957Open in IMG/M
3300031596|Ga0302134_10143631Not Available1004Open in IMG/M
3300031605|Ga0302132_10236631Not Available867Open in IMG/M
3300031625|Ga0302135_10039566Not Available2446Open in IMG/M
3300031851|Ga0315320_10257088All Organisms → Viruses → Predicted Viral1263Open in IMG/M
3300032138|Ga0315338_1204452Not Available576Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine62.16%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater19.82%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean4.50%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine3.60%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.80%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.90%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.90%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.90%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.90%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.90%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.90%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.90%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.90%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.90%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300005514Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263EnvironmentalOpen in IMG/M
3300005593Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86EnvironmentalOpen in IMG/M
3300005603Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007555Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555EnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300017702Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017715Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031596Marine microbial communities from Western Arctic Ocean, Canada - CB9_SCMEnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031625Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surfaceEnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032138Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1006406733300000101MarineMQIGDLVRVLAADLEGCFPLGVIVGFDEDEDPIVFERGEKFAHYREHLEVIYESR*
JGI25129J35166_106915123300002484MarineMQVGDLVRVLVGEHKEDFPLGVIIGFDEDDDPIVLERGQKLAHYRSHLEVIND*
JGI25131J35506_105497623300002511MarineMQVGDLVRVLVDGLRTDGGNFPLGVIVGFDEDEDPIVFERGEKLAHYRKHLEVIE*
JGI25133J35611_1001317243300002514MarineMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESR*
JGI25133J35611_1012016033300002514MarineMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR*
JGI25134J35505_1011270813300002518MarineQRRMDMQVGDLVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVIHERYESKSR*
JGI25130J35507_104972133300002519MarineMGRMAMRQTGQRGMDMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND*
Ga0066224_110896633300004457MarineMQVGDLVRVLVGEHKEDFPLGMVITFDEDDDPIVIERGQKLPHYRSHLEVIHESR*
Ga0066849_1019459833300005430MarineMQVGDLVRVLVGDHEGDFPLGMVVGFDEDDDPIVLERGQKLPHFRSHLEVIYENRNR*
Ga0066866_1029250033300005514MarineMQVGDLVRVLVGDHEGDFPLGMVVGFDEDDDPIVLERGQKLPHFRSHLEVIHESKSR*
Ga0066837_1025211923300005593MarineMRQTGQRGMDMQIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND*
Ga0066853_1010282733300005603MarineMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND*
Ga0075441_1008527953300006164MarineMQVGDLVRVLVGEHKEDFPLGMIIGFDEDDDPIVLERGQKLPHYRSHLEVIDESR*
Ga0075441_1017498723300006164MarineMQVGDLVRVLAGDLEGYFPLGVIVGFDEDDDPIVFERGQKLPHYRSHLEVIYENR*
Ga0098033_112031523300006736MarineMRETGERRMDMQIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND*
Ga0098035_115573733300006738MarineMQIGDLVRVKATMFKEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND*
Ga0098035_121664123300006738MarineMQIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVLERGQKLAHYRSHLEVIND*
Ga0098058_104182033300006750MarineMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVLERGEKLAHYRSHLEVIND*
Ga0098058_105667313300006750MarineIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVLERGQKLPHYRSHLEVIYENRSR*
Ga0098039_108928353300006753MarineDLVRVLAAIDGRPDFPLGVIIGFDEDEDPIVFERGQKLAHYPQHLEVINESKNR*
Ga0098044_111857823300006754MarineMQIGDLVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVIHERYESKSR
Ga0098054_118605223300006789MarineMQVGDLVRVLVGEHKEDFPLGMIIGFDEDDDPIVLERGQKLPHYRSHLEVIYENRSR*
Ga0098054_122301533300006789MarineMQVGDLVRVLVGDIEEDFPLGMVIGFDEDEDPIVFERGQKLAHYRKHLEVIYENRNR*
Ga0098055_108338813300006793MarineGHHCARRRQESCMGRMAVRQTGQRRVDMQIGDLVRVLVGEHKEDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEVIK*
Ga0098055_133770923300006793MarineMDMQIGDLVRVKATMFKEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVLND*
Ga0098060_106129533300006921MarineMQVGDLVRVLVGEHKEDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEAIHESKSR*
Ga0098060_108789623300006921MarineMQVGDLVRVLVGEHKKDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEVIK*
Ga0098053_106402233300006923MarineMQVGDLVRVLVGDIEEGFPLGMVVGLDEDDDPIVLERGQKLPHFRSHLEVIHESKSR*
Ga0098053_109278233300006923MarineMGRLAVRQIRQRGMDMQIGDLVRVLVGEHKEDFPLGVIIGFDEDDDPIVLERGQKLAHYPQHLEVIYENRNR*
Ga0098053_109315533300006923MarineMGRMAMRQTGQSRVDMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND*
Ga0098053_111989823300006923MarineMQVGDLVRILVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHLEVIK*
Ga0098034_122812513300006927MarineRQESLLGRLAVRQVRERRVDMQVGDLVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVIHERYESKSR*
Ga0098036_104687613300006929MarineMQVGDLVRVLVGEHKEDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEVIK*
Ga0070747_131195813300007276AqueousVKVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR*
Ga0102817_108624023300007555EstuarineMDMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR*
Ga0110931_120083233300007963MarineMQVGDLVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHLEVINESKSR*
Ga0098052_123264233300008050MarineMQIGDLVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVINESKNR
Ga0098052_128262833300008050MarineVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVIHERYESKSR*
Ga0098052_138832113300008050MarineMQVGDLVRVLVGDIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKH
Ga0114898_106928543300008216Deep OceanMQVGDLVRVLVADLEHEGDFPLGVIIAFDEDEDPIVFERGQKLEHYRKHIEVIHESKNR*
Ga0114993_1087685123300009409MarineMQIGDLVRVLAHNKVSDLMHDFPLGVIVGFDEDDDPIVFERGQKLAHYRKHLEVIE*
Ga0114902_105472813300009413Deep OceanMQVGDLVRVLVGDREGNYPLGLVIGFDEDDDPIVLERGQKLEHYRKH
Ga0115567_1038476633300009508Pelagic MarineMKVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR*
Ga0115003_1054492213300009512MarineMDMQVGDLVRVLIGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESR*
Ga0114901_111352013300009604Deep OceanMDMQIGDLVRVLVGDLEHEGDFPLGVIIAFDEDEDPIVFERGQKLEHYRKHIEVIHESKNR*
Ga0114999_1012968023300009786MarineMQVGDLVRVLVGDLEGYFPLGVVVGFDEDDDPIVFERGQKLAHYRKHLEVIE*
Ga0098056_112183413300010150MarineMQVGDLVRVLVGEHKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVIHERYESKSR
Ga0098061_129862823300010151MarineMGRMAMRQTGQRGMDMQVGDLVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVINESKNR*
Ga0098059_112073323300010153MarineMQIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND*
Ga0098047_1039629713300010155MarineMQVGDLVRVLVADLEHEGDFPLGVIIAFDEDEDPIVFERGQKLEHYRKHIEVIHERYESKSR*
Ga0181374_102733733300017702MarineMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGAKREHYRKHVEVIND
Ga0181367_107112813300017703MarineMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGDAKREHYRKHVEVIND
Ga0181367_109386613300017703MarineLGRMAVREVGQRRMDMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND
Ga0181372_108139623300017705MarineMQVGDLVRVLVGDHEGDFPLGMVVGFDEDDDPIVLERGQKLPHFRSHLEVIHESKSR
Ga0181369_103976513300017708MarineMDMQVGDLVRVLVGDHEGDFPLGIVIGFDEDHDPIVIERGQKLPHYRSHLEAIHESKSR
Ga0181387_111039323300017709SeawaterVREVGRREMDMQVGDLVRVLVGEHKEDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0181403_103195533300017710SeawaterMQVGDLVRVLVGDHEGDFPLGMVIGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0181403_104834033300017710SeawaterMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHFRSHLEVIHESKSR
Ga0181391_112116733300017713SeawaterMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESK
Ga0181412_106691733300017714SeawaterMQVGDLVRVLVGEHKEDFPLGIVIGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0181370_102707123300017715MarineMQVGDLVRVLVGAIEEDFPLCVIIGFYEADDPIVIGGGVKREHYRKHVEVIND
Ga0181370_103912813300017715MarineRVDMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND
Ga0181375_102491713300017718MarineMQVGDLVRVLVGEHKEDFPLGMIIGFDEDDDPIVLERGQKLPHYRSHLEVIYENRNR
Ga0181375_103576333300017718MarineMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYLKHVEVIND
Ga0187219_109059823300017751SeawaterMQVGDLVRVLVGDHEGDFPLGMVIGFDEDDDPIVIERGQKLPHFRSHLEVIYENRNR
Ga0181411_121985913300017755SeawaterRRMDMQVGDLVRVLVGDHEGDFPLGMVVGFDEDDDPIVLERGQKLPHFRSHLEVIYENRN
Ga0181420_105497623300017757SeawaterMQIGDLVRVLAHNKVSDLKEDLPLGVIVGFDEDDDPIVLERGQKLPHFRSHLEVIHESKS
Ga0181408_108130113300017760SeawaterVRVLVGEHKEDFPLGMVIGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0181408_116851713300017760SeawaterGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0181410_121441423300017763SeawaterMQVGDLVRVLVGDHEGDFPLGMVVGFDEDDDPIVLERGQKLPHFRSHLEVIYENRNR
Ga0181385_125427413300017764SeawaterMKTGDLVRVLVGDIEEGFPLGMVVGFDEDDDPIVLERGQKLPHFRSHLEVIYENRNK
Ga0187220_101554613300017768SeawaterVREVGRREMDMQVGDLVRVLVGDHEGDFPLGMVIGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0181432_109837633300017775SeawaterMQIGDLVRVLAHNKVSDLKKDFPLGVIVGFDEDDDPIVFEDRGGGGEKLAHYRKHLEVIE
Ga0181432_114629223300017775SeawaterMQVGDLVRVLVGDIEGHFPLGVVVGFDEDDDPIVLERGQKLPHYREHLEVIYENR
Ga0181432_117008123300017775SeawaterMQIGDLVRVLVGDINGRPDFPLGVIVGFDEDEDPIVFERGQKLPHYRKHLEVIE
Ga0181432_123899313300017775SeawaterMQVGDLVRVLVGDLEGGDFPLGVVVGFDEDDDPIVLERGQKLPHYRKHLEVIECTA
Ga0181432_126471243300017775SeawaterVGDHEGDFPLGVVVGFDEDDDPIVLERGQKLPHYRSHLEVIYENRNR
Ga0181432_127635723300017775SeawaterMGRMAMRQIRQRGMDMQVGDLVRVLVGDHEGDFPLGVVVGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0181432_130790723300017775SeawaterMQVGDLVRVLVGDHEGDFPLGVVVGFDEDDDPIVIEGGVKREHYRKHVEV
Ga0181380_105594933300017782SeawaterVREVGRREMDMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0181424_1032983133300017786SeawaterMQVGDLVRVLVGDHEGDFPLGMVVGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0211653_1015804823300020421MarineMQVGDLVRVLVGEHKKDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEVIK
Ga0206126_1022038533300020595SeawaterMQIGDLVRVLAADLEGCFPLGVIVGFDEDEDPIVFERGEKFAHYREHLEVIYESR
(restricted) Ga0255047_1057816223300024520SeawaterMQVGDLVRVKATMFKEDFPLGVIIGFDEDEDPIVFERGQKLEHYRKHIEVIHERYESKSR
Ga0207901_103815733300025045MarineMQVGDLVRVLVGDHEGDFPLGVVVGFDEDDDPIVFERGQKLPHYRSHLEVIE
Ga0207906_101288153300025052MarineMDMQVGDLVRVLVGDHEGDFPLGVVVGFDEDEDPIVFERGQKLAHYRKHLEVIE
Ga0208012_101477433300025066MarineMQVGDLVRVLVGEHKEDFPLGMIIGFDEDDDPIVLERGQKLPHYRSHLEVIYENRSR
Ga0208668_104916143300025078MarineMRETGERRMDMQIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND
Ga0208791_104536113300025083MarineVLVGEHKEDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0208793_114765333300025108MarineLVGEHKKDFPLGIVIGFDEDHDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0209349_110671233300025112MarineMGRLAVRQIRQRGMDMQVGDLVRVLVGEHKEDFPLGVIIGFDEDDDPIVLERGQKLAHYRSHLEVIND
Ga0208433_115666923300025114MarineMGRMAMRQIRQRGMDMQIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND
Ga0208790_119575523300025118MarineMQVGDLVRVLVGEHKEDFPLGVIIGFDEDDDPIVIERGQKVAHYPQHLEVIND
Ga0209434_113689333300025122MarineMQIGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKH
Ga0209644_104319933300025125MarineMQVGDLVRVLVDGLRTDGGNFPLGVIVGFDEDEDPIVFERGEKLAHYRKHLEVIE
Ga0208919_123835613300025128MarineMQVGDLVRVLVGEHKEDFPLGIVIGFDEDDDPIVIERGQKLPHYRSHLEAI
Ga0209128_107648233300025131MarineMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0209128_122568613300025131MarineMGRMAVREVGQRRMDMQVGDLVRVLVGGIEEDFPLGVIIGFDEDDDPIVIEGGVKREHYRKHVEVIND
Ga0208299_111051733300025133MarineMQVGDLVRVLVGDIEEDFPLGMVIGFDEDEDPIVFERGQKLAHYRKHLEVIYENRNR
Ga0209756_101652533300025141MarineMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESR
Ga0208179_104835533300025267Deep OceanMQVGDLVRVLVADLEHEGDFPLGVIIAFDEDEDPIVFERGQKLEHYRKHIEVIHESKNR
Ga0208030_110108213300025282Deep OceanMQVGDLVRVLVADIEHEGDFPLGVIIAFDEDEDPIVFERGQKLEHYRKHIEVIHESKNR
Ga0209757_1016289823300025873MarineMRQTGQRRMDMQVGDLVRVLVGDLEGDFPLGVVIGFDEDDDPIVLERGQKLPHYRKHLEVIND
Ga0209815_121411333300027714MarineMQVGDLVRVLAGDLEGYFPLGVIVGFDEDDDPIVFERGQKLPHYRSHLE
Ga0257114_107655813300028196MarineMQVGDLVRVLIGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0307488_1033642833300031519Sackhole BrineMQVGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0302134_1014363133300031596MarineMQIGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESR
Ga0302132_1023663123300031605MarineMQIGDLVRVLAHNKVSDLMHDFPLGVIVGFDEDDDPIVFEGGEKLAHYRKHLEVIE
Ga0302135_1003956643300031625MarineMQIGDLVRVLVGEHKEDFPLGMVIGFDEDDDPIVLERGQKLPHYRSHLEVIHESKSR
Ga0315320_1025708813300031851SeawaterEVGQRRMDMQVGDLVRVLIGEHKEDFPLGMVIGFDEDDDPIVIERGQKLPHYRSHLEVIHESKSR
Ga0315338_120445213300032138SeawaterCHCSRRRQESLLGRLAVRQVRERRVDMQIGDLVRVLVGDHEGDFPLGVVVGFDEDDDPIVLERGQKLPHYRKHLEVIE


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