Metagenome Family F086178

Basic Information
Family ID	F086178
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	64 residues
Representative Sequence	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMF
Number of Associated Samples	95
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	95.83 %
% of genes near scaffold ends (potentially truncated)	1.80 %
% of genes from short scaffolds (< 2000 bps)	16.22 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (90.991 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (36.036 % of family members)
Environment Ontology (ENVO)	Unclassified (91.892 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.288 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.63% β-sheet: 36.51% Coil/Unstructured: 42.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00154	RecA	2.70
PF13392	HNH_3	1.80
PF00111	Fer2	1.80
PF04965	GPW_gp25	0.90
PF00034	Cytochrom_C	0.90
PF06714	Gp5_OB	0.90
PF01883	FeS_assembly_P	0.90
PF00383	dCMP_cyt_deam_1	0.90
PF06945	DUF1289	0.90
PF13759	2OG-FeII_Oxy_5	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	2.70
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.90

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
All Organisms	root	All Organisms	9.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Viruses	superkingdom	All Organisms → Viruses	8.11 %
cellular organisms	root	All Organisms → cellular organisms	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.90 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10031368	All Organisms → Viruses → Predicted Viral	2914	Open in IMG/M
3300006947\|Ga0075444_10126900	All Organisms → Viruses → Predicted Viral	1090	Open in IMG/M
3300007236\|Ga0075463_10196660	Not Available	650	Open in IMG/M
3300007540\|Ga0099847_1023108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2017	Open in IMG/M
3300008219\|Ga0114905_1142722	Not Available	803	Open in IMG/M
3300009173\|Ga0114996_10530854	Not Available	883	Open in IMG/M
3300009426\|Ga0115547_1027889	All Organisms → Viruses → Predicted Viral	2142	Open in IMG/M
3300009437\|Ga0115556_1288541	Not Available	579	Open in IMG/M
3300009507\|Ga0115572_10206743	All Organisms → Viruses → Predicted Viral	1133	Open in IMG/M
3300009705\|Ga0115000_11017557	Not Available	505	Open in IMG/M
3300009786\|Ga0114999_10312312	All Organisms → Viruses → Predicted Viral	1261	Open in IMG/M
3300010300\|Ga0129351_1183814	Not Available	816	Open in IMG/M
3300021371\|Ga0213863_10104054	All Organisms → Viruses → Predicted Viral	1354	Open in IMG/M
3300021375\|Ga0213869_10128497	All Organisms → Viruses → Predicted Viral	1204	Open in IMG/M
3300021957\|Ga0222717_10000230	Not Available	49036	Open in IMG/M
3300022061\|Ga0212023_1063630	Not Available	511	Open in IMG/M
3300025280\|Ga0208449_1151378	Not Available	502	Open in IMG/M
3300025806\|Ga0208545_1159699	Not Available	531	Open in IMG/M
3300025849\|Ga0209603_1182520	Not Available	819	Open in IMG/M
3300027522\|Ga0209384_1089486	Not Available	748	Open in IMG/M
3300027668\|Ga0209482_1000361	Not Available	40578	Open in IMG/M
3300027779\|Ga0209709_10019307	All Organisms → Viruses → Predicted Viral	4517	Open in IMG/M
3300027801\|Ga0209091_10302916	Not Available	756	Open in IMG/M
3300031519\|Ga0307488_10207552	All Organisms → Viruses → Predicted Viral	1321	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.10%
Sediment	Environmental → Aquatic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	43.24%
Unclassified	Environmental → Aquatic → Marine → Unclassified	16.22%
Coastal	Environmental → Aquatic → Marine → Coastal	15.32%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.91%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	9.91%
Strait	Environmental → Aquatic → Marine → Strait	3.60%
Inlet	Environmental → Aquatic → Marine → Inlet	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	43.24%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	16.22%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.32%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	36.04%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.01%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.11%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	7.21%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	6.31%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	6.31%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.41%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.60%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.60%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.60%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.70%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.80%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.80%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.90%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.90%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.90%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008221	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022061	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025079	Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025237	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025832	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100313681	3300000101	Marine	MTTLAAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
DelMOSum2010_101236541	3300000101	Marine	MTTLCAKGYTTDGVPVFLWGYGNYKYEVEVKKLNFTECEVFDASFNEAVNKFEDRAINGVEFF*
DelMOSum2010_102620132	3300000101	Marine	MTTLCAKGYTTDGVPVFLWGYGNYKYEVEVKKLNFSESEVFDASYNEAVNKFEDRAINGVEFL*
DelMOSpr2010_101362542	3300000116	Marine	VTTLAAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
JGI20151J14362_102052151	3300001346	Pelagic Marine	KDDDMTTLAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
JGI20155J14468_101013423	3300001354	Pelagic Marine	VPLLVSPEKDDDMTTLAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
JGI24006J15134_101077472	3300001450	Marine	MTDIAFRAKGYPGNTMLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSECEVFEGPYEDAVSRFEDRAINGVEMY*
Ga0055584_1007448531	3300004097	Pelagic Marine	MTTLAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
Ga0066382_102051222	3300006013	Marine	MNMTDLAFRAKGYPGNTMLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMY*
Ga0075441_100940854	3300006164	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVRKDTFTDCEVFEGPYEDAVSRFEDRAINGVEMF*
Ga0075443_101146613	3300006165	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVRKDTFTDCEVFEGPYEDAVSRFEDRAINGVEM
Ga0066376_101744193	3300006900	Marine	MTMLDLCAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVDKFEFRAINGVVVY*
Ga0070748_10793251	3300006920	Aqueous	MPLLVSPEKDDDMTTLAAKGYTTDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY*
Ga0075444_101269002	3300006947	Marine	MTTLAAKGFTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSKFEDRAINGVEMF*
Ga0075468_101864581	3300007229	Aqueous	MTTLAAKGYTIDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY*
Ga0075463_101966603	3300007236	Aqueous	TDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
Ga0070747_10358922	3300007276	Aqueous	MTTLAAKGYTTDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY*
Ga0099847_10231082	3300007540	Aqueous	VSTLAAKGYTTDGVPVFLWSYGNYKYEVEVKKLNFSESEVFDASYNEAVNKFEDRAINGVEFL*
Ga0114905_11427222	3300008219	Deep Ocean	MTTLCAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
Ga0114916_10633171	3300008221	Deep Ocean	MTTLAAKGFTTDGVPVYLWAYGNYRYEVEVRKDTFTDCEVFEGPYEDAVSRFEDRAINGVEMF*
Ga0114916_11397782	3300008221	Deep Ocean	MLDLCAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVDKFEFRAINGVVVY*
Ga0118687_101049021	3300009124	Sediment	MTTLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFTESEVFDASFNEAVNKFEDRAINGVEFF*
Ga0114995_105412031	3300009172	Marine	MTTLAAKGYTTDGVPVFLWAYGNYRYEVEVKKLNFSECVVFEGPYEDAVSKFEDRAINGVEMF*
Ga0114996_105308541	3300009173	Marine	MTTLAAKGYTADGVPVYLWAYGGYEYAVEVKKDTFTDTECLDCTYEEAVDKFKERAINGLTMY*
Ga0115551_10540823	3300009193	Pelagic Marine	MPLLVSPEKDDDMTTLAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
Ga0114993_101915743	3300009409	Marine	MKGLMIMTTLAAKGFTTDGVPVYLWAYGNYRYEVEVKKLNFTDCEVFEGPYEDAVCKFEERAINGVEMF*
Ga0114908_11030491	3300009418	Deep Ocean	MTTLCAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSYCHVFDASFNEAVDKFKERAINGLTMY*
Ga0114994_102663313	3300009420	Marine	MRNNGDFDMTTLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFTESEVFDASFNEAVNKFEDRALNGVEFF*
Ga0114998_102008931	3300009422	Marine	MTTLAAKGYTTDGVAVYLWAYGGYEYAVEVKKDTFTDTECLDCTYEEAVNKFKERAINGLTMY*
Ga0114998_102689681	3300009422	Marine	LVPPMKGLMNMTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCVVFEGPYEDAVSRFEDRAINGVEMY*
Ga0114997_102099571	3300009425	Marine	MLDLCAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSECEVFEGPYEDAVSRFEDRAINGVEMY*
Ga0115547_10278893	3300009426	Pelagic Marine	MTTLCAKGYTTDGVPVFLWGYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
Ga0114915_10924241	3300009428	Deep Ocean	LLVSPTKGLMNMTTLAAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVSRFEGRAINGVEMY*
Ga0115008_112213021	3300009436	Marine	VTTLAAKGYTTDGVPVYLWAYGGYEYAVEVKKDTFTDTECLDCTYEEAVDKFKERAINGLTMY*
Ga0115556_12885411	3300009437	Pelagic Marine	MITLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFSESEVFDASFNEAVNKFEDRAINGVEFL*
Ga0115568_102705651	3300009498	Pelagic Marine	DDMTTLAAKGYTTDGVPVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY*
Ga0115572_102067433	3300009507	Pelagic Marine	MTTLCAKGYTTDGVPVFLWGYGNYKYEVEVKKLNFSESEVFDASFNEAVNKFEDRAINGVEFF*
Ga0115003_105024421	3300009512	Marine	AAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMF*
Ga0115000_103647292	3300009705	Marine	MTTLAAKGFTTDGVPVYLWAYGNYRYEVEVKKLNFTDCEVFEGPYEDAVCKFEERAINGIEMF*
Ga0115000_110175572	3300009705	Marine	MRNNGDFDMTTLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFTESEVFDASFNEAVNKFEDRAINGVEFF*
Ga0115002_102306741	3300009706	Marine	MTDIAFRAKGYPGNTMLAAKGYTTDGVPVYLWGYGNYRYEVEVKKLNFSECEVFEGPYEDAVSRFEDRAI
Ga0115001_103958652	3300009785	Marine	ATAGLSTKDDDMTTLAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY*
Ga0115001_105861991	3300009785	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSECVVFEGPYEDAVSKFEDRAINGVEMF*
Ga0114999_103123122	3300009786	Marine	MTLAGKGYTTDGVPVYLWAYGGYEYAVEVKKGTFTETECLDCSYEDAVDKLKERAINGLTLY*
Ga0114999_103742483	3300009786	Marine	TLAAKGFTTDGVPVYLWAYGNYRYEVEVKKLNFSDCVVFEGPYEDAVCKFEERAINGIEMF*
Ga0114999_105423094	3300009786	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRA
Ga0129351_11838141	3300010300	Freshwater To Marine Saline Gradient	MTTLCAKGYTTDGVPVFLWSYGNYKYEVEVKKLNFSESEVFDASFNEAVNKFEDRAINGVEFL*
Ga0129324_102531831	3300010368	Freshwater To Marine Saline Gradient	VTTLAAKGYTTDGVPVFLWGYGNYKYEVEVKKLNFSESEVFDASYNEAVNKFEDRAINGVEFL*
Ga0129327_101529571	3300013010	Freshwater To Marine Saline Gradient	MPLLVSPEKDDDMTTLAAKGYTIDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY*
Ga0180120_103302762	3300017697	Freshwater To Marine Saline Gradient	MTTLAAKGYTIDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY
Ga0181383_11751821	3300017720	Seawater	PVYLWAYGGYEYAVEVKKDTFTETECLDCTFEEAVDKFKERAINGLTMY
Ga0181405_11769951	3300017750	Seawater	MPLLDSPEKDDDMTDLAFRAKGYPGNTMLAAKGYTTDGVPVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY
Ga0181409_11145181	3300017758	Seawater	MPLLVSPEKDSNMTTLAAKGYTTDGVPVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTLY
Ga0187220_11366342	3300017768	Seawater	MTDLAFRAKGYPGNTMLAAKGYTTDGVPVYLWAYGGYEYAVEVKKDTFTETECLDCTFEEAVDKFKERAINGLTMY
Ga0206128_10649732	3300020166	Seawater	MTTLAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0206130_102410792	3300020187	Seawater	LAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0211686_102759171	3300020382	Marine	MTLAGKGYTTDGVPVYLWAYGGYEYAVEVKKDTFTETECLDCSYEDAVDKFKERAINGLTMY
Ga0211680_101638812	3300020389	Marine	MTMLDLCAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVDKFEFRAINGVVVY
Ga0206123_100120536	3300021365	Seawater	MPLLVSPEKDDDMTTLAAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0213863_101040545	3300021371	Seawater	MTTLAAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0213869_101284971	3300021375	Seawater	VTTLAAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0222717_1000023089	3300021957	Estuarine Water	MTTLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFTESEVFDASFNEAVNKFEDRAINGVEFF
Ga0212023_10636303	3300022061	Aqueous	MTTLCAKGYTTDGVPVFLWGYGNYKYEVEVKKLNFSESEVFDASYNEAVNKFEDRAINGVEFL
(restricted) Ga0233432_104198892	3300023109	Seawater	LIDMTSLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSECEVFEAPYEDAVSKFEDRAINGVEMF
Ga0244775_111848571	3300024346	Estuarine	MPLLVSPEKDDDMTTLAAKGYTIDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY
Ga0207890_10648421	3300025079	Marine	AAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMY
Ga0209336_101292914	3300025137	Marine	MTDIAFRAKGYPGNTMLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDR
Ga0209634_13129283	3300025138	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCVVFEGPYEDAVSKFED
Ga0209337_11195801	3300025168	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSECDVFEGPYEDAVSRFEDRAINGVEMF
Ga0209337_12271162	3300025168	Marine	MTDIAFRAKGYPGNTMLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMY
Ga0209337_12718212	3300025168	Marine	MTLAGKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFESPYEDAVSKFEERAINAIEMF
Ga0208031_10267521	3300025237	Deep Ocean	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVRKDTFTDCEVFEGPYEDAVSRFEDRAINGVEMF
Ga0208449_11513781	3300025280	Deep Ocean	MTTLCAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSYCHVFDASFNEAVDKFKERAINGLTMY
Ga0209195_11162661	3300025590	Pelagic Marine	DGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0208643_11507631	3300025645	Aqueous	GYTIDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY
Ga0208134_11091161	3300025652	Aqueous	MTTLAAKGYTTDGVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVDKFKERAINGLTMY
Ga0209532_12025701	3300025696	Pelagic Marine	TDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0208545_11596992	3300025806	Aqueous	MTTLCAKGYTTDGVPVFLWGYGNYKYEVEVKKLNFTECEVFDASFNEAVNKFEDRAINGVEFF
Ga0209307_12033941	3300025832	Pelagic Marine	GVAVYLWAYGGYEYAVEVKKDTFTETECLDCTYEEAVNKFKERAINGLTMY
Ga0209603_11825201	3300025849	Pelagic Marine	MITLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFSESEVFDASFNEAVNKFEDRAINGVEFF
Ga0209223_104209801	3300025876	Pelagic Marine	PVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0209335_102360383	3300025894	Pelagic Marine	MTTLAAKGYTTDGVPVFLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKER
Ga0209425_100754942	3300025897	Pelagic Marine	VPLLVSPEKDDDMTTLAAKGYTTDGVPVYLWSYGNYKYEVEVKKVNFSDCHVFDASFNEAVDKFKERAINGLTMY
Ga0209384_10894863	3300027522	Marine	MTTLCAKGYTTDGVPVFLWGYGNYRYEVEVKKVNFTECEVFDASFNEAVNKFEDRAINGVEFFGHDDIMTLFERF
Ga0209384_10980881	3300027522	Marine	GYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVDKFEFRAINGVVVY
Ga0209482_100036139	3300027668	Marine	MTTLAAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEAPYEDAVSRFEFRAINGVVVY
Ga0209383_11200231	3300027672	Marine	TLLVSPTKGLIDMTTLAAKGYTTDGVPVYLWRYGSYKYEVEVRKLNFTESEMLDASYIDAVSRFEERAINGVEVF
Ga0209554_11142801	3300027685	Marine	MTMLDLCAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVSRFEGRAINGVEMY
Ga0209710_10594645	3300027687	Marine	MTTLAAKGYTTDGVPVFLWAYGNYRYEVEVKKLNFSECVVFEGPYEDAVSKFEDRAINGVEMF
Ga0209816_11122201	3300027704	Marine	MTTLAAKGFTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSKFEDRAINGVEMF
Ga0209709_1001930710	3300027779	Marine	MTLAGKGYTTDGVPVYLWAYGGYEYAVEVKKGTFTETECLDCSYEDAVDKLKERAINGLTLY
Ga0209709_104326191	3300027779	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDR
Ga0209502_100414125	3300027780	Marine	VPLLVSPTKGLMIMTTLAAKGYTTDGVPVFLWAYGNYRYEVEVKKLNFSECVVFEGPYEDAVSKFEDRAINGVEMF
Ga0209711_103641971	3300027788	Marine	MTDLAFRSKGYPGNTMLAGKGYTTDGVPVYLWAYGGYEYAVEVKKGTFTETECLDCSYEDAVDKLKERAINGLTLY
Ga0209711_104023381	3300027788	Marine	LAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMF
Ga0209830_104081551	3300027791	Marine	PVYLWSYGNYKYEVEVKKVNFSDCHVFDPSFNEAVDKFKERAINGLTMY
Ga0209091_103029161	3300027801	Marine	MTMLDLCAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSECEVFEGPYEDAVSRFEDRAINGV
Ga0209089_100567028	3300027838	Marine	MTDLAFRAKGYPGNTMLAAKGYTTDGVPVYLWAKGSYIYEIEVRKDTVTDCEVFEGPYEDAVSKFEDRAINGVEMY
Ga0209501_104680441	3300027844	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCVVFEGPYEDAVCKFEERAINGIEMF
Ga0257110_12967541	3300028197	Marine	MTTLAAKGYTADGVPVYLWAYGGYEYAVEVKKDTFTDTECLDCTYEEAVDKFKERAINGLTMY
Ga0308025_11839971	3300031143	Marine	AKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVDKFEFRAINGVVVY
Ga0307488_102075522	3300031519	Sackhole Brine	MTTLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFTESEVFDASFNEAVNKFEDRALNGVEFF
Ga0307488_105376692	3300031519	Sackhole Brine	MTMLDLCAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMY
Ga0308019_102824341	3300031598	Marine	MTTLAAKGFTTDGVPVYLWAYGNYRYEVEVRKDTFTDCEVFEGPYEDAVSRFEDRAINGVEMF
Ga0308007_100433042	3300031599	Marine	MTTLAAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVSRFEGRAINGVEMY
Ga0308007_101570431	3300031599	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVLNFRDWRGDCEVFEGPYEDAVSRFEDRAINGVEMY
Ga0302126_103214471	3300031622	Marine	MTTLAAKGYTTDGVPVYLWAYGNYRYEVEVKKLNFSDCEVFEGPYEDAVSRFEDRAINGVEMF
Ga0302121_100821424	3300031626	Marine	MRNNGDFDMTTLAAKGYTTDGVPVFLWAYGNYKYEVEVKKLNFTESEVFDASFNEAVNKFEDRALNGVEFF
Ga0302118_100691833	3300031627	Marine	KGFTTDGVPVYLWAYGNYRYEVEVKKLNFTDCEVFEGPYEDAVCKFEERAINGIEMF
Ga0308001_102247222	3300031644	Marine	MTMLDLCAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEGPYEDAVDKFEFRAINGV
Ga0308001_102917921	3300031644	Marine	PPTKGLMNMTTLAAKGYTTDGVPVYLWAKGSYIYEIEVRKDTFTDCEVFEAPYEDAVSRFEFRAINGVVVY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086178

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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