Metagenome / Metatranscriptome Family F086154

Basic Information
Family ID	F086154
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	60 residues
Representative Sequence	VFAAFKIIGTFLLACASVVAAIVESGHPLLFGCLCAAFVAGIVGAEGYRAYRKHSVRSSIPS
Number of Associated Samples	86
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.98 %
% of genes near scaffold ends (potentially truncated)	24.32 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (49.550 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.315 % of family members)
Environment Ontology (ENVO)	Unclassified (53.153 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.955 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 61.11% β-sheet: 0.00% Coil/Unstructured: 38.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00248	Aldo_ket_red	18.02
PF07690	MFS_1	13.51
PF02698	DUF218	12.61
PF01266	DAO	2.70
PF01323	DSBA	2.70
PF07470	Glyco_hydro_88	1.80
PF16153	DUF4861	1.80
PF02771	Acyl-CoA_dh_N	0.90
PF07282	OrfB_Zn_ribbon	0.90
PF03413	PepSY	0.90
PF01047	MarR	0.90
PF12802	MarR_2	0.90
PF12146	Hydrolase_4	0.90
PF14031	D-ser_dehydrat	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	12.61
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	12.61
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.55 %
Unclassified	root	N/A	47.75 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.74 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.60 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.60 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	2.70 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	2.70 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	2.70 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.90 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.70 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.90 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.70 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %
unclassified Herbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	2.70 %
Pseudomonas sp. PIA16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	2.70 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Herbaspirillum sp. YR522	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	0.90 %
Achromobacter marplatensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10056826	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300002070\|JGI24750J21931_1081813	Not Available	538	Open in IMG/M
3300004081\|Ga0063454_101058716	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005176\|Ga0066679_10373636	Not Available	933	Open in IMG/M
3300005260\|Ga0074072_1056154	Not Available	1134	Open in IMG/M
3300005329\|Ga0070683_102066720	Not Available	547	Open in IMG/M
3300005331\|Ga0070670_100033007	All Organisms → cellular organisms → Bacteria → Proteobacteria	4461	Open in IMG/M
3300005332\|Ga0066388_105441585	Not Available	645	Open in IMG/M
3300005332\|Ga0066388_108434480	Not Available	513	Open in IMG/M
3300005335\|Ga0070666_10054412	All Organisms → cellular organisms → Bacteria → Proteobacteria	2700	Open in IMG/M
3300005337\|Ga0070682_100756288	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005339\|Ga0070660_101804053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	521	Open in IMG/M
3300005436\|Ga0070713_102391618	Not Available	511	Open in IMG/M
3300005455\|Ga0070663_100245326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1416	Open in IMG/M
3300005529\|Ga0070741_10943915	Not Available	743	Open in IMG/M
3300005530\|Ga0070679_101844015	Not Available	553	Open in IMG/M
3300005535\|Ga0070684_100747052	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300005547\|Ga0070693_101274102	Not Available	567	Open in IMG/M
3300005548\|Ga0070665_100221162	All Organisms → cellular organisms → Bacteria → Proteobacteria	1894	Open in IMG/M
3300005548\|Ga0070665_101020166	Not Available	839	Open in IMG/M
3300005617\|Ga0068859_100045798	All Organisms → cellular organisms → Bacteria → Proteobacteria	4394	Open in IMG/M
3300005719\|Ga0068861_100563949	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300005834\|Ga0068851_10344536	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300005843\|Ga0068860_101879317	Not Available	620	Open in IMG/M
3300006165\|Ga0075443_10302890	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300006354\|Ga0075021_10164954	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300006893\|Ga0073928_10665486	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300009093\|Ga0105240_11556226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	692	Open in IMG/M
3300009093\|Ga0105240_12364059	Not Available	550	Open in IMG/M
3300009101\|Ga0105247_10106237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1801	Open in IMG/M
3300009101\|Ga0105247_10135444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1609	Open in IMG/M
3300009174\|Ga0105241_10366092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300009545\|Ga0105237_10502997	Not Available	1218	Open in IMG/M
3300009551\|Ga0105238_11673326	Not Available	667	Open in IMG/M
3300009553\|Ga0105249_10285755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1649	Open in IMG/M
3300010043\|Ga0126380_11673563	Not Available	571	Open in IMG/M
3300010371\|Ga0134125_12101377	Not Available	614	Open in IMG/M
3300010375\|Ga0105239_10956394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PIA16	984	Open in IMG/M
3300010375\|Ga0105239_12775547	Not Available	572	Open in IMG/M
3300010376\|Ga0126381_103668176	Not Available	601	Open in IMG/M
3300010376\|Ga0126381_104935714	Not Available	512	Open in IMG/M
3300010397\|Ga0134124_11639432	Not Available	674	Open in IMG/M
3300010401\|Ga0134121_10181709	All Organisms → cellular organisms → Bacteria → Proteobacteria	1810	Open in IMG/M
3300011270\|Ga0137391_11076879	Not Available	652	Open in IMG/M
3300012206\|Ga0137380_11399004	Not Available	584	Open in IMG/M
3300012359\|Ga0137385_10539421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. YR522	985	Open in IMG/M
3300012359\|Ga0137385_10684089	Not Available	857	Open in IMG/M
3300012582\|Ga0137358_10628137	Not Available	720	Open in IMG/M
3300012924\|Ga0137413_10003286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7001	Open in IMG/M
3300012924\|Ga0137413_10336596	Not Available	1066	Open in IMG/M
3300012924\|Ga0137413_10636490	Not Available	802	Open in IMG/M
3300012927\|Ga0137416_10117456	All Organisms → cellular organisms → Bacteria → Proteobacteria	2031	Open in IMG/M
3300012929\|Ga0137404_10524777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300012930\|Ga0137407_10098940	All Organisms → cellular organisms → Bacteria → Proteobacteria	2496	Open in IMG/M
3300012930\|Ga0137407_10455824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300012931\|Ga0153915_11450488	Not Available	802	Open in IMG/M
3300012931\|Ga0153915_11662048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter marplatensis	747	Open in IMG/M
3300014168\|Ga0181534_10000276	All Organisms → cellular organisms → Bacteria → Proteobacteria	37114	Open in IMG/M
3300014969\|Ga0157376_11883792	Not Available	635	Open in IMG/M
3300015241\|Ga0137418_11033948	Not Available	591	Open in IMG/M
3300015245\|Ga0137409_11566658	Not Available	509	Open in IMG/M
3300015264\|Ga0137403_11365013	Not Available	556	Open in IMG/M
3300020580\|Ga0210403_11119135	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300021168\|Ga0210406_10496164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	966	Open in IMG/M
3300021168\|Ga0210406_11303493	Not Available	523	Open in IMG/M
3300022894\|Ga0247778_1007607	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300022897\|Ga0247764_1005025	All Organisms → cellular organisms → Bacteria → Proteobacteria	4488	Open in IMG/M
3300023265\|Ga0247780_1166699	Not Available	593	Open in IMG/M
3300024330\|Ga0137417_1298476	Not Available	688	Open in IMG/M
3300025321\|Ga0207656_10149222	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300025711\|Ga0207696_1176039	Not Available	566	Open in IMG/M
3300025900\|Ga0207710_10319633	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300025903\|Ga0207680_10332416	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300025903\|Ga0207680_11050267	Not Available	583	Open in IMG/M
3300025913\|Ga0207695_10441387	Not Available	1185	Open in IMG/M
3300025913\|Ga0207695_11564308	Not Available	540	Open in IMG/M
3300025914\|Ga0207671_10068182	All Organisms → cellular organisms → Bacteria → Proteobacteria	2650	Open in IMG/M
3300025914\|Ga0207671_10942805	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300025961\|Ga0207712_10138349	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300025986\|Ga0207658_10311128	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1360	Open in IMG/M
3300026555\|Ga0179593_1173102	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1527	Open in IMG/M
3300027681\|Ga0208991_1059716	All Organisms → cellular organisms → Bacteria → Proteobacteria	1150	Open in IMG/M
3300027771\|Ga0209279_10021566	All Organisms → cellular organisms → Bacteria → Proteobacteria	1967	Open in IMG/M
3300027842\|Ga0209580_10649693	Not Available	522	Open in IMG/M
3300027908\|Ga0209006_10493569	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1021	Open in IMG/M
3300028379\|Ga0268266_10021564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5487	Open in IMG/M
3300028379\|Ga0268266_10135910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2202	Open in IMG/M
3300028379\|Ga0268266_10345485	All Organisms → cellular organisms → Bacteria → Proteobacteria	1397	Open in IMG/M
3300028380\|Ga0268265_10810402	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300028381\|Ga0268264_11684710	Not Available	644	Open in IMG/M
3300029987\|Ga0311334_11576592	Not Available	557	Open in IMG/M
3300030521\|Ga0307511_10012658	All Organisms → cellular organisms → Bacteria → Proteobacteria	8265	Open in IMG/M
3300030521\|Ga0307511_10282412	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300030966\|Ga0075383_11163114	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031184\|Ga0307499_10296457	Not Available	531	Open in IMG/M
3300031231\|Ga0170824_114407744	Not Available	562	Open in IMG/M
3300031231\|Ga0170824_114851445	Not Available	725	Open in IMG/M
3300031231\|Ga0170824_124764887	Not Available	757	Open in IMG/M
3300031446\|Ga0170820_10855889	Not Available	712	Open in IMG/M
3300031446\|Ga0170820_12422534	Not Available	541	Open in IMG/M
3300031446\|Ga0170820_13551164	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031507\|Ga0307509_10000016	All Organisms → cellular organisms → Bacteria → Proteobacteria	266991	Open in IMG/M
3300031754\|Ga0307475_10737841	Not Available	784	Open in IMG/M
3300031902\|Ga0302322_100241568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1998	Open in IMG/M
3300031962\|Ga0307479_10534744	Not Available	1155	Open in IMG/M
3300032893\|Ga0335069_12606099	Not Available	521	Open in IMG/M
3300032955\|Ga0335076_10029054	All Organisms → cellular organisms → Bacteria → Proteobacteria	5551	Open in IMG/M
3300032955\|Ga0335076_10642037	Not Available	943	Open in IMG/M
3300032955\|Ga0335076_11061325	Not Available	693	Open in IMG/M
3300033180\|Ga0307510_10000011	All Organisms → cellular organisms → Bacteria → Proteobacteria	355464	Open in IMG/M
3300033180\|Ga0307510_10007169	All Organisms → cellular organisms → Bacteria → Proteobacteria	13279	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.26%
Host-Associated	Host-Associated	38.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.95%
Plants	Host-Associated → Plants	38.74%
Aquatic	Environmental → Aquatic	6.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.21%
Roots	Host-Associated → Plants → Roots	4.50%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.70%
Marine	Environmental → Aquatic → Marine	1.80%
Peat	Environmental → Terrestrial → Peat	1.80%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Sediment	Environmental → Aquatic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.22%
Loam	Environmental → Terrestrial → Soil → Loam	10.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.21%
Unclassified	Host-Associated → Plants → Roots → Unclassified	4.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.70%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.90%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.50%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.70%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.70%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.80%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.90%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086154

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100568263	3300001661	Forest Soil	VFAAFKIIVAFLLACASVAAAIVESGHPLLFGCSCVAFVAGIVGAEALRVHRNRTVRSTSR*
JGI24750J21931_10818132	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	VFAAFKVIAAFLLACASVAAAIFESGHPLLFGCACVAFVIGIVGAEALRIHRK
Ga0063454_1010587162	3300004081	Soil	TLLVACVSVVAAVFESGHPLLFGCLGGAFAVGIFGSELYRWYRNNSVRSSIPR*
Ga0066679_103736362	3300005176	Soil	VFAAFKIIGTLLLACVSIVAAIVESKYPVIFGCACVAFVAGIVGSEALRAYRNRTVRTSLQ*
Ga0074072_10561541	3300005260	Soil	VFAAFKIVLTLLVACASVVAAVFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNSVRSSIPR*
Ga0070683_1020667201	3300005329	Corn Rhizosphere	VFAAVKIIGTFLLACVSVIAAILESNHPVLFGGAGAAFLLGIALAEGLRAYRNRIVRSSPTH*
Ga0070670_1000330073	3300005331	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNNVRSSIPR*
Ga0066388_1054415851	3300005332	Tropical Forest Soil	MEESIVFAAFKIVGTLLIACASVVAAILESGHPLLFGCACAAFVLGAIAAEAFRSYRNGTVRSS
Ga0066388_1084344802	3300005332	Tropical Forest Soil	VFAAFKVIGSFLLACASIVAAIWESGHPLLFGCACVAFVTGLIGAEVFRAYRVRTVRSSIRS*
Ga0070666_100544124	3300005335	Switchgrass Rhizosphere	VFAAFKVIAAFLLACASVAAAIFESGHPLLFGCACVAFVIGIVGAEALRIHRKRTVRSTSAR*
Ga0070682_1007562882	3300005337	Corn Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNTVRSSIPR*
Ga0070660_1018040531	3300005339	Corn Rhizosphere	VFAAFKIVLTFLVACASVVAAIVESGHPLLFGCLCAAFAIGIVGSEGYRWYRNNSVRSSIPR*
Ga0070713_1023916182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VFAAFKVIGTLMVACVSVAAAIVESGHPVLFGCSCVAFVLGIVGAEALRVHRNRTVR
Ga0070663_1002453263	3300005455	Corn Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRKNSVRSSIPR*
Ga0070741_109439152	3300005529	Surface Soil	VFAAFKIIGTFLLACASIVAAIWESGHPLLFGCACAAFVAGLIGAEVFRAYRNGT
Ga0070679_1018440151	3300005530	Corn Rhizosphere	LACVSVIAAIVESNHPILFGCACGAFLLGIVGAEGLRAYRSRTVRSSIPR*
Ga0070684_1007470522	3300005535	Corn Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRKNTVRSSIPR*
Ga0070693_1012741022	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLGGAFAVGIFGSELYRWYRKNTVRSSIPR*
Ga0070665_1002211622	3300005548	Switchgrass Rhizosphere	VFAAFKIIATVLLACASVAAAIVESAHPLLFACLFTAFLVGIFGAEGYRWYRNHTVRSSIPR*
Ga0070665_1010201661	3300005548	Switchgrass Rhizosphere	RWRWAENVGVSVFAAFKIVLTFLVACASVVAAIVESGHPLLFGCLCAAFAIGIVGSEGYRWYRNNSVRSSIPR*
Ga0068859_1000457982	3300005617	Switchgrass Rhizosphere	VNVFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNNVRSSIPR*
Ga0068861_1005639492	3300005719	Switchgrass Rhizosphere	VFAAFKVIAAFLLACASVAAAIFESGRPLLFGCACVAFVIGIVGAEALRIHRKRTVRSTSAR*
Ga0068851_103445362	3300005834	Corn Rhizosphere	VSVFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYR
Ga0068860_1018793172	3300005843	Switchgrass Rhizosphere	VFAAFKIIGTFLLACVSIVAAIVESKHPVIFGCACVAFVAGVVGSEALRAYRNRTVRTSLN*
Ga0075443_103028902	3300006165	Marine	AVFAAFKIIATIMLACASVVAAIVESEHPLVLGCVCAAFAIGIVGAEGYRWYRNNSVRSSIPR*
Ga0075021_101649541	3300006354	Watersheds	VFAAFKIIATFVLACVSVGAAIVKSGHPLLFGCLSAAFLVGVFGAEAMRFYRAHTVRSSISQ*
Ga0073928_106654862	3300006893	Iron-Sulfur Acid Spring	VFAAFKIISTLVLACASVIAAIVESGHPVLFGCLCAAFVVGIVGAEALRVYRNHNVRSSIN*
Ga0105240_115562262	3300009093	Corn Rhizosphere	VFAAFKIIATIMLACASVVAAIVESEHPLVLGCVCAAFVIGIVGAEGYRWYRNHSVRSSIPR*
Ga0105240_123640591	3300009093	Corn Rhizosphere	VFAAFKVIGTFLLACVSIVAAIWNSKHPLLFSCACGAFVIGIVGAEIFRAHRSRTVRSLIR*
Ga0105247_101062371	3300009101	Switchgrass Rhizosphere	LVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRKNSVRSSIPR*
Ga0105247_101354443	3300009101	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNSVRSSIPR*
Ga0105241_103660922	3300009174	Corn Rhizosphere	VFAAFKIVLTFLVACASVVAAVFESGHPLLFGCLCGAFTIGIFGSEVYRWYRNNTVRSSIPR*
Ga0105237_105029972	3300009545	Corn Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRKNNVRSSIPR*
Ga0105238_116733262	3300009551	Corn Rhizosphere	VFAAFKIVLTFLVACASVVAAIFESGHPLLFGCLGGAFAVGIFGSELYRWYRKNTV
Ga0105249_102857552	3300009553	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNHTVRSSIPR*
Ga0126380_116735632	3300010043	Tropical Forest Soil	FLLACASIVAAILESGHPVLFGCACVAFVGGIAAAEALRAHRNRTVRSSIH*
Ga0134125_121013771	3300010371	Terrestrial Soil	AAFLLACASVAAAIFESGHPLLFGCACVAFVIGIVGAEALRIHRKRTVRSTSAR*
Ga0105239_109563942	3300010375	Corn Rhizosphere	VFAAFKIVLTFLVACGAGLAAIFESGHPLLFGCLCGAFVVGIFGSELYRWYRNNSVRSSIPR*
Ga0105239_127755472	3300010375	Corn Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYR
Ga0126381_1036681761	3300010376	Tropical Forest Soil	VFAAFKVIGTFLVACLSVTAAIVESGHPVLFGCACVAFVIGIVGAEALRAYRNRTVRSSIR*
Ga0126381_1049357142	3300010376	Tropical Forest Soil	VFAAFKFIGTFVLACGSIVAAIWESRHPLLFGCACLAFVIGIVGAEIFRAYRSRTVRSAIR*
Ga0134124_116394322	3300010397	Terrestrial Soil	LQALTIEPLQGVSVLAAFKILLTFLVASASVIAAIVESGHPLLFGCLCAAFVVGIVGSEGYRWYRSNNVRSSIPR*
Ga0134121_101817093	3300010401	Terrestrial Soil	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCAAFAVGIFGSELYRWYRKNTVRSSIPR*
Ga0137391_110768791	3300011270	Vadose Zone Soil	VFAAFKIMGTLLLACASVIAAIVESAHPVLFGCLCAAFVAGIVGAEALRSYRNRNVRSSIN*
Ga0137380_113990042	3300012206	Vadose Zone Soil	VFAAFKVIVTFLLACVSVVAAIVESGHPLLFGCSCVAFVAGLIGAEALRAYRNRTVRSVSR*
Ga0137385_105394211	3300012359	Vadose Zone Soil	VFAAFKVIAAFLLACASVAAAIVESGHPLLFGCACVAFVAGIVGAEALRIYRNRAVRSASS*
Ga0137385_106840892	3300012359	Vadose Zone Soil	VFAAFKVIVTFLLACVSVGAAIVESGHPLLFGCSCVAFVAGLFGAEALRAYRNRTVRCVSR*
Ga0137358_106281371	3300012582	Vadose Zone Soil	VFAAFKVIAAFLLACVSVAAAIFESAHPLLFGCACVAFVIGIVGAEALRVHRNRTVRSTTR*
Ga0137413_100032868	3300012924	Vadose Zone Soil	VFAAFKIIATIMLACASIAAAIVESAHPLLFACLCAAFVVGIVGAEGYRWYRNNTVRSSIPR*
Ga0137413_103365962	3300012924	Vadose Zone Soil	VFAAFKIIGTFLLACASVVAAIVESGHPLLFGCLCAAFVAGIVGAEGYRAYRKHSVRSSIPS*
Ga0137413_106364902	3300012924	Vadose Zone Soil	VFAAFKIIGTLLLACASVIAAIVESAHPLLFGCLCAAFVAGIVGAEALRSYRNRIVRSSIN*
Ga0137416_101174562	3300012927	Vadose Zone Soil	VFAAFKVIAAFLLACASVAAAIVESGHPVLFGCSCVAFVAGIVGAEALRVHRNRTVRSTSR*
Ga0137404_105247772	3300012929	Vadose Zone Soil	VFAAFKVIVTFLLACVSLGAAIVESGHPLLFGCSCVAFVAGLIGAEALRAYRNRAVRCVSR*
Ga0137407_100989403	3300012930	Vadose Zone Soil	VFAAFKVIVTFLLACVSVGAAIVESGHPLLFGCSCVAFVAGLIGAEALRAYRNRAVRCVSR*
Ga0137407_104558242	3300012930	Vadose Zone Soil	VFAAFKVIAAFLLACASVAAAIVESGHPLLFGCACVAFVAGIVGAEALRIYRSRAVRSVSS*
Ga0153915_114504881	3300012931	Freshwater Wetlands	VFAAFKIIATFVLACVSVIAAIVETGHPVLFGCLCVAFVAGVLGAEAVRAYRNHSVRSSVN*
Ga0153915_116620482	3300012931	Freshwater Wetlands	AVFAAFKIIATFVLACVSVIAAIVETGHPVLFGCLCAAFVAGVLGAEAVRAYRNHSVRAPSMRRDPARH*
Ga0181534_1000027635	3300014168	Bog	VLAAFKIVLTFLVASVSVIAAIVESGHPLLFGCLCGAFVVGIVGSEGYRWYRSHSVRSSIPR*
Ga0157376_118837922	3300014969	Miscanthus Rhizosphere	VFAAFKIVLTFLVACASVVAAVFESGHPLLFGCLCGAFAVGIFGSEVYRWYRNNTVRSSIPR*
Ga0137418_110339481	3300015241	Vadose Zone Soil	VFAAFKIIGTFLLACASVVATIVESGHPLLFGCLCAAFVAGIVGAEGYRAYRKHSVRSSIPS*
Ga0137409_115666581	3300015245	Vadose Zone Soil	VFAAFKIIGTFLLACASVVATIVESGHPLLFGCLCAAFVAGIVGAEGYRAYRKHSVRSSISS*
Ga0137403_113650131	3300015264	Vadose Zone Soil	VFAAFKVIAAFLLACVSVAAAIFESAHPLLFGCACVAFVIGIVGAEALRVHRNRKVRSTTR*
Ga0210403_111191352	3300020580	Soil	VFAAFKIIGTLVLACASVIAAIVESGHPVLFGCLCAAFVVGIVGAEALRVYRNHNVRSSI
Ga0210406_104961641	3300021168	Soil	VFAAFKIVATFLLACVSVVVAILQSGHPVLFGCSGAAFVIGITSAELVRV
Ga0210406_113034932	3300021168	Soil	KIIGTLVLACASVIAAIVESGHPVLFGCLCAAFVAGIVGAEALRSYRNRNVRSSIN
Ga0247778_10076072	3300022894	Plant Litter	VFAVFKIIGTIVLACASVGAAIVESGHPLLFGCLCTAFVVGIIGAEGFQWHRKHTVRSSIPR
Ga0247764_10050254	3300022897	Plant Litter	VFAAFKIIGTIVLACASVGAAIVESGHPLLFGCLCGAFVVGIVGAEGFQWYRKHSVRSWTPK
Ga0247780_11666992	3300023265	Plant Litter	VFAAFKIVLTFLLASASVIAAIVESGHPLLFGCLFSAFVVGIVGSEGYRWYRNNSV
Ga0137417_12984762	3300024330	Vadose Zone Soil	VFAAFKIIGTFLLACASVVATIVESGHPLLFGCLCAAFVAGIVGAEGYRAYRKHSVRSSISS
Ga0207656_101492222	3300025321	Corn Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNTVRSSIPR
Ga0207696_11760392	3300025711	Switchgrass Rhizosphere	AFLLACASVAAAIFESGRPLLFGCACVAFVIGIVGAEALRIHRKRTVRSTSAR
Ga0207710_103196332	3300025900	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNSVRSSIPR
Ga0207680_103324162	3300025903	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNNVRSSIPR
Ga0207680_110502672	3300025903	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRKNTVRSSIPR
Ga0207695_104413872	3300025913	Corn Rhizosphere	VFAAFKIVLTFLVACASVVAAIVESGHPLLFGCLCAAFAIGIVGSEGYRWYRNNSVRSSIPR
Ga0207695_115643082	3300025913	Corn Rhizosphere	VFAAFKVIGTFLLACVSIVAAIWNSKHPLLFSCACGAFVIGIVGAEIFRAHRSRTVRSLI
Ga0207671_100681822	3300025914	Corn Rhizosphere	VFAAFKIIATIMLACASVVAAIVESEHPLVLGCVCAAFVIGIVGAEGYRWYRNHSVRSSIPR
Ga0207671_109428052	3300025914	Corn Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRKNNVRSSIPR
Ga0207712_101383493	3300025961	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNHTVRSSIPR
Ga0207658_103111281	3300025986	Switchgrass Rhizosphere	AAFLLACASVAAAIFESGHPLLFGCACVAFVIGIVGAEALRIHRKRTVRSTSAR
Ga0179593_11731022	3300026555	Vadose Zone Soil	VFAAFKIIAAFLLACASVAAAIVESGHPLLFGCSCVAFVAGIVGAEALRVYRNRIVRSAS
Ga0208991_10597162	3300027681	Forest Soil	VFAAFKIIVAFLLACASVAAAIVESGHPLLFGCSCVAFVAGIVGAEALRVHRNRTVRSTS
Ga0209279_100215661	3300027771	Marine	VFAAFKIIATIMLACASVVAAIVESEHPLVLGCVCAAFAIGIVGAEGYRWYRNNSVRSSIPR
Ga0209580_106496932	3300027842	Surface Soil	VFAAFKVIGTFLVACLSVTAAIVESGHPVLFGCACVAFVIGIVGAEALRAYRNRTVRSSI
Ga0209006_104935691	3300027908	Forest Soil	AAFKIIGTLVLACASVIAAIVESGHPVLFGCLCAAFVAGIVGAEALRVYRNHNVRSSIN
Ga0268266_100215644	3300028379	Switchgrass Rhizosphere	VFAAFKIIATVLLACASVAAAIVESAHPLLFACLFTAFLVGIFGAEGYRWYRNHTVRSSIPR
Ga0268266_101359103	3300028379	Switchgrass Rhizosphere	RSLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRNNNVRSSIPR
Ga0268266_103454853	3300028379	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWYRN
Ga0268265_108104021	3300028380	Switchgrass Rhizosphere	VFAAFKIVLTLLVACASVVAAIFESGHPLLFGCLCGAFAVGIFGSELYRWY
Ga0268264_116847102	3300028381	Switchgrass Rhizosphere	VFAAFKIIGTFLLACVSIVAAIVESKHPVIFGCACVAFVAGVVGSEALRAYRNRTVRTSL
Ga0311334_115765922	3300029987	Fen	VFAAFKIIGAILLACASVGAAIVESGYPLLFGCLCSAFVIGIMGAEGYHWYRNHTVRSDVPR
Ga0307511_100126584	3300030521	Ectomycorrhiza	VFAAFKIIGTLLLACASVIAAIVESGHPVLFGCLCAAFVAGIVGAEGYRAYRNRIVRSSIPG
Ga0307511_102824122	3300030521	Ectomycorrhiza	VFAAFKVIVTFLLACVSVGAAIVESGHPLLFGCSCVAFVAGLIGAEALRAYRNRTVRCVS
Ga0075383_111631141	3300030966	Soil	VFAAFKIIGTLLLACASVIAAIVESGHPVLFACLCAAFVIGIVGAEVVRVHRSRTVRSST
Ga0307499_102964571	3300031184	Soil	TFVVACVSIVVGIVESGHPLLFGCAGAAFVIGIVGSELFRAYRSHTVRSSIHQ
Ga0170824_1144077441	3300031231	Forest Soil	VFAAFKIIGTVLLACASVIAAIVESGHPVLFGCLCAAFVGGIVGAEGIRAYRKHNVRSSIHN
Ga0170824_1148514452	3300031231	Forest Soil	VFAAFKIIGTVLLACASVIAAIVESGHPVLFGCLCAAFVIGIVAAEALRVHRNHNVRSSI
Ga0170824_1247648871	3300031231	Forest Soil	VFAAFKVVAAFLLACASVAAAIVESGHPVLFGCACVAFVAGIVGAEALRIYRKRTVRSTS
Ga0170820_108558892	3300031446	Forest Soil	VFAAFKIIGTLLLACASVIAAIVESGHPVLFGCLCAAFVIGIVAAEALRVHRNHNVRSSI
Ga0170820_124225341	3300031446	Forest Soil	VFAAFKVVAAFLLACASVAAAIVESGHPVLFGCSCVAFVAGIVGAEALRIYRKRTVRSTS
Ga0170820_135511642	3300031446	Forest Soil	VFAAFKIIGTLLLACASVIAAIVESGHPVLFGCLCAAFVAGIVGAEGYRAYRSRIVRSSIPG
Ga0307509_10000016200	3300031507	Ectomycorrhiza	VFAAFKILATFVLACVSVVVAIVESGHPLLFGCAGAAFVIGIVGSELFRAYRNHTVRSSIQQ
Ga0307475_107378412	3300031754	Hardwood Forest Soil	FAAFKVIGTFLVACLSVTAAIVESGHPVLFGCACVAFVIGIVGAEALRAYRNRTVRSSIR
Ga0302322_1002415684	3300031902	Fen	VFAAFKIIGAILLACASVGAAIVESGYPLLFGCLCSAFVIGIMGAEGYHWYRNNTVRSDVPR
Ga0307479_105347442	3300031962	Hardwood Forest Soil	VFAAFKVVGSFLVACASIVAAIWESGHPLLFGCASVAFVIGLIGAELFRAYRNRTVRSAI
Ga0335069_126060992	3300032893	Soil	VLAAFKIVLTFLVACAAGFAAIVESGHPLLFGCLSAAFAVGIVGSEGYRWYRNNS
Ga0335076_100290541	3300032955	Soil	VFAAFKIIASLVIACVSVVAAIVESRHPYLVGCLSGAFGVGVLGAEALRAYRNNTVRSSI
Ga0335076_106420372	3300032955	Soil	VFAAFKFIGTFIVACASVVAAIVESGHPWLLSCACAAFGLGALGAEVFRMYRRNTVRSAI
Ga0335076_110613252	3300032955	Soil	VFAGIKVIGTFLLACASIVAAIWESGHPMLFGCACVAFLVGIIGAEAFRAHRNRTVRSSI
Ga0307510_1000001115	3300033180	Ectomycorrhiza	VFAAFKIVLTFLVACAAGFAAIVESGHPLLIGCLSGAFVVGIVGSEGYRWYRNNSVRSSIPR
Ga0307510_100071692	3300033180	Ectomycorrhiza	VFAAFKIIATIMLACASVAAAIVESAHPFLFACLCAAFVVGIVGAEGYRWYRNNSVRSSIPR

Hidden Markov Model


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