Metagenome Family F086106

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086106
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	118 residues
Representative Sequence	LAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE
Number of Associated Samples	100
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.00 %
% of genes near scaffold ends (potentially truncated)	47.75 %
% of genes from short scaffolds (< 2000 bps)	86.49 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.955 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (7.207 % of family members)
Environment Ontology (ENVO)	Unclassified (25.225 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.144 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.09% β-sheet: 33.57% Coil/Unstructured: 57.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF07690	MFS_1	2.70
PF02702	KdpD	2.70
PF00753	Lactamase_B	2.70
PF12697	Abhydrolase_6	1.80
PF01609	DDE_Tnp_1	1.80
PF04075	F420H2_quin_red	1.80
PF00872	Transposase_mut	1.80
PF00501	AMP-binding	0.90
PF02371	Transposase_20	0.90
PF12681	Glyoxalase_2	0.90
PF00005	ABC_tran	0.90
PF07836	DmpG_comm	0.90
PF00278	Orn_DAP_Arg_deC	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	2.70
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.80
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.80
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.80
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.80
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.80
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.80
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.80
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.90
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.90
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.90
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.95 %
Unclassified	root	N/A	45.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.95 %
Unclassified	root	N/A	45.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.95 %
Unclassified	root	N/A	45.05 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.05 %
Unclassified	root	N/A	45.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.44 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.80 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	25.23 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.80 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	20.72 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	1.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.80 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.80 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	14.41 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	3.60 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	1.80 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.80 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	1.80 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	3.60 %
Nocardia africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia africana	1.80 %
Paenibacillus sonchi group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group	1.80 %
Mycobacterium simiae complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex	1.80 %
unclassified Microbispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora	1.80 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1.80 %
Mycobacterium nebraskense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	0.90 %
Mycolicibacterium moriokaense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	0.90 %
Mycolicibacterium xanthum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Mycobacterium sp. IWGMT90018-18076	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. IWGMT90018-18076	1.80 %
Mycobacterium parascrofulaceum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parascrofulaceum	1.80 %
Microbispora sp. ATCC PTA-5024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	1.80 %
Paenibacillus riograndensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group → Paenibacillus riograndensis	1.80 %
Nocardia africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia africana	1.80 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1.80 %
Mycobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	0.90 %
Mycobacterium sp. JS623	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	0.90 %
Mycobacterium nebraskense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	0.90 %
Mycolicibacterium moriokaense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	0.90 %
Mycolicibacterium xanthum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Mycobacterium parascrofulaceum ATCC BAA-614	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parascrofulaceum → Mycobacterium parascrofulaceum ATCC BAA-614	1.80 %
Mycobacterium sp. IWGMT90018-18076	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. IWGMT90018-18076	1.80 %
Microbispora sp. ATCC PTA-5024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	1.80 %
Paenibacillus riograndensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group → Paenibacillus riograndensis	1.80 %
Nocardia africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia africana	1.80 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1.80 %
Mycobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	0.90 %
Mycobacterium sp. JS623	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	0.90 %
Mycobacterium nebraskense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	0.90 %
Mycolicibacterium moriokaense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	0.90 %
Mycolicibacterium xanthum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01A5RSK	Not Available	536	Open in IMG/M
3300001661\|JGI12053J15887_10239621	Not Available	905	Open in IMG/M
3300003368\|JGI26340J50214_10019864	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300004092\|Ga0062389_104969448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	501	Open in IMG/M
3300004114\|Ga0062593_101526744	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300004152\|Ga0062386_100512509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	975	Open in IMG/M
3300005330\|Ga0070690_101436731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group → Paenibacillus riograndensis	556	Open in IMG/M
3300005335\|Ga0070666_10787532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group → Paenibacillus riograndensis	700	Open in IMG/M
3300005337\|Ga0070682_100437996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parascrofulaceum → Mycobacterium parascrofulaceum ATCC BAA-614	998	Open in IMG/M
3300005356\|Ga0070674_100665432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	886	Open in IMG/M
3300005365\|Ga0070688_100164600	Not Available	1526	Open in IMG/M
3300005366\|Ga0070659_100578311	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005434\|Ga0070709_10607499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	843	Open in IMG/M
3300005436\|Ga0070713_100067475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3012	Open in IMG/M
3300005437\|Ga0070710_10031160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	2875	Open in IMG/M
3300005459\|Ga0068867_100442807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1105	Open in IMG/M
3300005459\|Ga0068867_101286458	Not Available	675	Open in IMG/M
3300005578\|Ga0068854_102202701	Not Available	510	Open in IMG/M
3300005602\|Ga0070762_10349670	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300006052\|Ga0075029_100343948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	960	Open in IMG/M
3300006059\|Ga0075017_100431177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	993	Open in IMG/M
3300006059\|Ga0075017_100638610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300006173\|Ga0070716_100123369	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300007258\|Ga0099793_10479737	Not Available	617	Open in IMG/M
3300009093\|Ga0105240_10662206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1143	Open in IMG/M
3300009094\|Ga0111539_12021315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300009148\|Ga0105243_10970405	Not Available	850	Open in IMG/M
3300009156\|Ga0111538_10164584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2817	Open in IMG/M
3300009156\|Ga0111538_10779429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1211	Open in IMG/M
3300009174\|Ga0105241_10843396	Not Available	847	Open in IMG/M
3300009645\|Ga0116106_1068392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1167	Open in IMG/M
3300009683\|Ga0116224_10436102	Not Available	624	Open in IMG/M
3300009698\|Ga0116216_10138585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia africana	1496	Open in IMG/M
3300009700\|Ga0116217_10415959	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300010339\|Ga0074046_10051409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2738	Open in IMG/M
3300010341\|Ga0074045_10449246	Not Available	832	Open in IMG/M
3300010341\|Ga0074045_10808605	Not Available	593	Open in IMG/M
3300010371\|Ga0134125_10321601	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300010373\|Ga0134128_10749686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1083	Open in IMG/M
3300010379\|Ga0136449_101470539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia africana	1045	Open in IMG/M
3300010397\|Ga0134124_11496190	Not Available	703	Open in IMG/M
3300010401\|Ga0134121_12906617	Not Available	526	Open in IMG/M
3300012203\|Ga0137399_10084360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	2420	Open in IMG/M
3300012683\|Ga0137398_10813932	Not Available	653	Open in IMG/M
3300012915\|Ga0157302_10562220	Not Available	505	Open in IMG/M
3300012957\|Ga0164303_10051221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parascrofulaceum → Mycobacterium parascrofulaceum ATCC BAA-614	1831	Open in IMG/M
3300012957\|Ga0164303_10305640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	940	Open in IMG/M
3300012985\|Ga0164308_10142592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1758	Open in IMG/M
3300012985\|Ga0164308_10452292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1063	Open in IMG/M
3300012987\|Ga0164307_10006597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	5471	Open in IMG/M
3300012989\|Ga0164305_11429729	Not Available	610	Open in IMG/M
3300013296\|Ga0157374_11121317	Not Available	807	Open in IMG/M
3300013297\|Ga0157378_10449530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1278	Open in IMG/M
3300013306\|Ga0163162_10142959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	2507	Open in IMG/M
3300013306\|Ga0163162_10438374	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300013307\|Ga0157372_11646742	Not Available	739	Open in IMG/M
3300014158\|Ga0181521_10230561	Not Available	990	Open in IMG/M
3300014159\|Ga0181530_10307696	Not Available	829	Open in IMG/M
3300014326\|Ga0157380_10518319	Not Available	1162	Open in IMG/M
3300014326\|Ga0157380_11360320	Not Available	759	Open in IMG/M
3300014490\|Ga0182010_10216908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1007	Open in IMG/M
3300014491\|Ga0182014_10003655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	18271	Open in IMG/M
3300014491\|Ga0182014_10115003	Not Available	1587	Open in IMG/M
3300014491\|Ga0182014_10504949	Not Available	592	Open in IMG/M
3300014498\|Ga0182019_10712341	Not Available	712	Open in IMG/M
3300014499\|Ga0182012_10001454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	25946	Open in IMG/M
3300014838\|Ga0182030_10065294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	5499	Open in IMG/M
3300014968\|Ga0157379_12676490	Not Available	500	Open in IMG/M
3300014969\|Ga0157376_12659431	Not Available	540	Open in IMG/M
3300016445\|Ga0182038_11262546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300017822\|Ga0187802_10080159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1217	Open in IMG/M
3300017924\|Ga0187820_1056306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1071	Open in IMG/M
3300017946\|Ga0187879_10164169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1252	Open in IMG/M
3300018025\|Ga0187885_10168419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1028	Open in IMG/M
3300018030\|Ga0187869_10456979	Not Available	607	Open in IMG/M
3300018043\|Ga0187887_10220059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. IWGMT90018-18076	1127	Open in IMG/M
3300018057\|Ga0187858_10696832	Not Available	606	Open in IMG/M
3300019787\|Ga0182031_1551515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. IWGMT90018-18076	1273	Open in IMG/M
3300021168\|Ga0210406_10985957	Not Available	628	Open in IMG/M
3300021170\|Ga0210400_10787923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	779	Open in IMG/M
3300021361\|Ga0213872_10368070	Not Available	587	Open in IMG/M
3300023046\|Ga0233356_1012754	Not Available	932	Open in IMG/M
3300023101\|Ga0224557_1007760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	6887	Open in IMG/M
3300025898\|Ga0207692_10527351	Not Available	752	Open in IMG/M
3300025899\|Ga0207642_10100408	Not Available	1451	Open in IMG/M
3300025906\|Ga0207699_10425037	Not Available	950	Open in IMG/M
3300025937\|Ga0207669_10894591	Not Available	741	Open in IMG/M
3300025939\|Ga0207665_10210609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1420	Open in IMG/M
3300025981\|Ga0207640_10843501	Not Available	797	Open in IMG/M
3300025986\|Ga0207658_10114956	Not Available	2135	Open in IMG/M
3300026067\|Ga0207678_10716557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	881	Open in IMG/M
3300026075\|Ga0207708_10852719	Not Available	787	Open in IMG/M
3300027381\|Ga0208983_1008064	Not Available	1969	Open in IMG/M
3300027546\|Ga0208984_1036410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1036	Open in IMG/M
3300027634\|Ga0209905_1005798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1473	Open in IMG/M
3300027681\|Ga0208991_1057893	Not Available	1170	Open in IMG/M
3300028536\|Ga0137415_10074415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3256	Open in IMG/M
3300028587\|Ga0247828_10810146	Not Available	595	Open in IMG/M
3300028587\|Ga0247828_11186527	Not Available	510	Open in IMG/M
3300028809\|Ga0247824_10560872	Not Available	681	Open in IMG/M
3300030000\|Ga0311337_10734981	Not Available	854	Open in IMG/M
3300030002\|Ga0311350_11268301	Not Available	656	Open in IMG/M
3300030707\|Ga0310038_10336338	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031764\|Ga0318535_10438411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300031946\|Ga0310910_10940262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300031954\|Ga0306926_12678314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300031962\|Ga0307479_11265800	Not Available	699	Open in IMG/M
3300032060\|Ga0318505_10505490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300032205\|Ga0307472_101407311	Not Available	677	Open in IMG/M
3300034195\|Ga0370501_0134822	Not Available	849	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.77%
Host-Associated	Host-Associated	25.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.36%
Plants	Host-Associated → Plants	25.23%
Aquatic	Environmental → Aquatic	14.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.02%
Freshwater	Environmental → Aquatic → Freshwater	11.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.21%
Sediment	Environmental → Aquatic → Sediment	2.70%
Peat	Environmental → Terrestrial → Peat	2.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.53%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.01%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.41%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.70%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_5374310	2040502001	Soil	DWYVRVFDFAALLMEERESAVMAVLLQHPCGVRLLLRRAAAPLPTLRGYPLFGLTVPSYTELQHWVEHLTTLNVEHSAVHQAHPGSAVTLTGPDLVRIQLQTNEGPSGEDG
JGI12053J15887_102396212	3300001661	Forest Soil	MLTGLNHVTVPTSDPLAASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPMAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHEAHPGWAVTLTGPDLVRIQLQTAAGPSGEDE*
JGI26340J50214_100198642	3300003368	Bog Forest Soil	VTVPTSDPLAGSDWYVRVFDFATLLIEERESEVVAVLLQHPCGARLLLRRAAAPLDALNGYPLFGLTVDSYTELLSWVEHFTTLDVEHSAMHQAHLGWAVTVIGPDLVRIQLHTDEGPSGDGE*
Ga0062389_1049694481	3300004092	Bog Forest Soil	AASDWYVRVFDFAALLIEELENEVTAVLLQHPCGARLLLRSAAESLATLRGYPLFGLSVANHDELLRWVERLTTFDVEHSGVHQAHLGWAVTVTGPDLVQIQLHTDEGPSGEGT*
Ga0062593_1015267441	3300004114	Soil	WQRLVCTGIDFAAVLIEERETEVVAVPLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWLEHLTSFGVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0062386_1005125092	3300004152	Bog Forest Soil	GKGRARRAEGHQGPELTSCLAAGENNRVPQLVGVHHVAVPTSDPLAASDWYVRVFDFAELLVGERENEVMTVLLQHPCGARLLLWRVDAPLALGSYPLFGLGVANHNELLRWVERLTAFDVEHSDVHEAHLGWALIATGPDLVRIQLHTDEGPSGEGE*
Ga0070690_1014367311	3300005330	Switchgrass Rhizosphere	PLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0070666_107875321	3300005335	Switchgrass Rhizosphere	PLAGSDWYVRVFDFAAVLIEERETEVVAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGGDD*
Ga0070682_1004379962	3300005337	Corn Rhizosphere	DPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0070674_1006654321	3300005356	Miscanthus Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAAAPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0070688_1001646001	3300005365	Switchgrass Rhizosphere	LAGTDWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGGG*
Ga0070659_1005783112	3300005366	Corn Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTSFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0070709_106074991	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTITGPDLVRIQLQTDEGPSGEDE*
Ga0070713_1000674755	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TSDPLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVERLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0070710_100311606	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0068867_1004428072	3300005459	Miscanthus Rhizosphere	MEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0068867_1012864581	3300005459	Miscanthus Rhizosphere	LIEERETEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0068854_1022027011	3300005578	Corn Rhizosphere	SDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAAAPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0070762_103496703	3300005602	Soil	MEERESEVVAVLLQHPCGARLLLRRGDAPLADLRGYPLFGLTVPSYTELQHWVEHLTTLDVEHSAVHQAHPGSAVTLTGPDLVRIQLQTDEGPSGEDE*
Ga0075029_1003439482	3300006052	Watersheds	GLHHVTVPSSDPVAASDWYVRVFDFAALLIEELENEVTAVLLQHPCGARLLLRRAAEPLATLRGYPLFGLSVANQHELLRWVEHLTTFDVEHSGVHEAHLGWAVTVTGPDLVRIQLHTDEGPSGEVE*
Ga0075017_1004311771	3300006059	Watersheds	RENEVTAVLLQHPCGARLLLRQAAEPLATLRGYPLFGLSVVNHDELLRWVERLTTFDVEHSGVHQAHLGWAVTVTGPDLVLIQLHTDEGPSGEGE*
Ga0075017_1006386103	3300006059	Watersheds	VFEFAELLVGERENEVMTVLLQHPCGARLLLRRVDAPLALGSYPLFGLGVANHNELLRWMERLTAFDVEHSDVHEAHLGWALIATGPDLVRIQLHTDEGPSGEGE*
Ga0070716_1001233693	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEESENEVAAVLLQHPCGIRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0099793_104797371	3300007258	Vadose Zone Soil	MLTGLNHVTVPTSDPLAASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPVAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHEAHPGWAVTLTGPDLVRIQLQTAAGPSDEDE*
Ga0105240_106622063	3300009093	Corn Rhizosphere	AVPTTEPLAGSDWYVRVFDFAAVVIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGGDD*
Ga0111539_120213151	3300009094	Populus Rhizosphere	SDPLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVERLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0105243_109704051	3300009148	Miscanthus Rhizosphere	LIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFGVEHGAVHLAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0111538_101645844	3300009156	Populus Rhizosphere	VSTTTVSPSSDPLAGTDWYVHVFGFSALLMEESENEVAAVLLQHPCGIRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIPLQTDDGPGGDDD*
Ga0111538_107794293	3300009156	Populus Rhizosphere	VAVPTSDPLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVERLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0105241_108433962	3300009174	Corn Rhizosphere	LIEESESEVVAVLLQHPCGVRLLLRRASTPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0116106_10683921	3300009645	Peatland	LAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLRRADEPLAALRGYPMFGLSVANHEELLRWVEHLTTFDVEHSDVHQAHLGWAVIVTRQLLWRRPWRGT*
Ga0116224_104361021	3300009683	Peatlands Soil	VPSSDPLAASDWYVRVFDFVALVVEERENEVTAVLLQHPCGARLLLRHAAEPLAALRGYPFFGLSVANHDELLRWVEHLTTFDVEHSEVHQAHLGWAVIVTGPDLVRIQLHTDEGPSGEVE*
Ga0116216_101385851	3300009698	Peatlands Soil	VPASDPLAASDWYVRVFDFVALVVEERENEVTAVLLQHPCGARLLLRHAAEPLAALRGYPFFGLSVANHDELLRWVEHLTTFDVEHSGLHEAHLGWAVTVIGPDLVRIQLHTDEGPSAEDE*
Ga0116217_104159591	3300009700	Peatlands Soil	IEERENEVTAVLLQHPCGARLLLRRAAEPLATLRGYPLFGLSVANQHELLRWVEHLTTFDVEHSGLHEAHLGWAVTVIGPDLVRIQLHTDEGPSAEDE*
Ga0074046_100514092	3300010339	Bog Forest Soil	VPTSDPLAASDWYVRVFDFAELLVGERENEVMTVLLQHPCGARLLLWRVDAPLALGSYPLFGLGVANHNELLRWVERLTAFDVEHSDVHEAHLGWALIATGPDLVRIQLHTDEGPSGEGE
Ga0074045_104492461	3300010341	Bog Forest Soil	VPTSDPLAASDWYVRVFDFAELLVEERENEVMTVLLQHPCGARLLLWRVDAPLALGSYPLFGLGVANHNELLRWVERLTAFDVEHSDVHEAHLGWALIATGPDLVRIQLHTDEGPSGEGE
Ga0074045_108086051	3300010341	Bog Forest Soil	VPSSDPVAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLRRAAEPLATLRGYPLFGLSVANQHELLRWVEHLTTFDVEHSGLHEAHLGWAVTVIGPDLVRIQLHTDEGPSAEDE*
Ga0134125_103216011	3300010371	Terrestrial Soil	VAVPTTDPLAGSDWYVRVFDFAAVLIEERETEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFGVEHGAVHLAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0134128_107496861	3300010373	Terrestrial Soil	HVAVPTTDPLAGSDWYVRVFDFAAVLIEERETEVVAVLLQHPCGVRLLLRRTAAQLAALREYPLFGLTVASYTELQHWVEHLTSFGVEHGAVHLAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0136449_1014705391	3300010379	Peatlands Soil	VPASDPLAASDWYVRVFDFVALVVEERENEVTAVLLQHPCGARLLLRHAAEPLAALRGYPFFGLSVANHDELLRWVEHLTTFDVEHSEVHQAHLGWAVIVTGPDLVRIQLHTDEGPSGEVE*
Ga0134124_114961901	3300010397	Terrestrial Soil	EERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFGVEHGAVHLAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0134121_129066171	3300010401	Terrestrial Soil	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREYPLFGLTVASYTELQHWVERLTTFDVEHGAVHQAHRGWAVTVTRPDLVRIQLQTDEGPTGEDE*
Ga0137399_100843604	3300012203	Vadose Zone Soil	MLTGLNHVTVPTSDPLAASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPVAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHEAHPGWAVTLTGPDLVRIQLQTAAGPSGEDE*
Ga0137398_108139321	3300012683	Vadose Zone Soil	MLTGLNHVTVPTSDPLAASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPVAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHDAHPGWAVTLTGPDLVRIQLQTAAGPSGEDE*
Ga0157302_105622201	3300012915	Soil	LIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWLEHLTSFGVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0164303_100512212	3300012957	Soil	MPTTDPLACSDWYVRVFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAAAPLAALREFPLFGLTVPSYTELQHWVQHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0164303_103056403	3300012957	Soil	EESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLLGLTVPSYPRLQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0164308_101425921	3300012985	Soil	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTCPDLVRIQLQTDEGPSGEDE*
Ga0164308_104522921	3300012985	Soil	ESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDEPAAATTKCVGARATRW*
Ga0164307_100065978	3300012987	Soil	MPTTDPLACSDWYVQIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAAAPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0164305_114297291	3300012989	Soil	VAVPTTDPLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASHTELQHWVEHLTSSGVEHGAVHQAHRGWAVTVTGP
Ga0157374_111213172	3300013296	Miscanthus Rhizosphere	LAGTDWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHRSSSGVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0157378_104495303	3300013297	Miscanthus Rhizosphere	VPTNDPLAGTDWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0163162_101429596	3300013306	Switchgrass Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0163162_104383742	3300013306	Switchgrass Rhizosphere	VAVPTTDPLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFGVEHGAVHLAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0157372_116467421	3300013307	Corn Rhizosphere	VAVPTTDPLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0181521_102305611	3300014158	Bog	VPSSDPLAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLLGAAEPLAAFRGYPLFGLSVANHDELLRWVERLTTFDVEHSGVHQAHLGWAVTVTGPDLVRIQLHTDEGPSGEDE*
Ga0181530_103076961	3300014159	Bog	VPSSDPLAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLLGAAEPLAAFRGYPLFGLSVANHDELLRWVERLTTFDVEHSGVHQAHLGWAVTVTGPDLVHTQLHTDEGPSGEDE*
Ga0157380_105183193	3300014326	Switchgrass Rhizosphere	DWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0157380_113603201	3300014326	Switchgrass Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEERETEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFGVEHGAVHLAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0182010_102169081	3300014490	Fen	VSVPASDPIVASDWYVRVFGFVNLLIEEHETGVAAVLLQHPCGARVLLRRAPTPLAALRGYPLLALSVASYTELLNWVNHLATFDVEHSAIHQAHLGWAVTVTGPDQLCIQLRTDEGPSGEDE*
Ga0182014_100036551	3300014491	Bog	VSVPASDPVACSDWWVRVFGFATVLIEERETEVVTVLLQHPCGVRLLLRRAAAPVVGLPEYPLFGLTVASYAELLRWVEHLTTLEVEHSAVHQAHPGAAVTVTGPDLVRIQLQTDEGPSGEDD*
Ga0182014_101150032	3300014491	Bog	VPSSDPLAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLRRADEPLATLRGYPMFGLSVANHDELLRWVEHLTTFDVEHSDVHQAHLGWAVTVTGPDLVQIQLHTDEGPSGEAE*
Ga0182014_105049491	3300014491	Bog	RVLGFTTLLIEEHENDVVTVLLQHACGARLLLRRGEIPLAALREYPLFALGVASYTELLDWEEHLTTVDAEHSAVHAAHLGWAVTVTGPDLILIELRTDDGPSGEDE*
Ga0182019_107123411	3300014498	Fen	MRWVGVDEVAGGGKNRRVPTFTRLHHVSVPTRDPVASSDWFERVLGFTTLLIEEHENDVVAVLLQHACGARLLLRRGEIPLAALREYPLFALGVASYTELLDWEEHLTTVDAEHSAVHAAHLGWAVTVTGPDLILIELRTDDGPSGEDE*
Ga0182012_1000145421	3300014499	Bog	VSVPASDPVACSDWWVRVFGFATVLIEERETEVVTVLLQHPCGVRLLLRRAAAPVVGLPEYPLFGLTVASYAELLRWVEHLTTLEVEHSAVHQAHPGAAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0182030_100652943	3300014838	Bog	MRWVGVDEVAGGGKNRRVPTFTRLHHVSVPTRDPLASSDWFERVLGFTTLLIEEHENDVVTVLLQHACGARLLLRRGEIPLAALREYPLFALGVASYTELLDWEEHLTTVDAEHSAVHAAHLGWAVTVTGPDLILIELRTDDGPSGEDE*
Ga0157379_126764901	3300014968	Switchgrass Rhizosphere	DPLAGSDWDVLVFDFAAVLIEGRESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE*
Ga0157376_126594311	3300014969	Miscanthus Rhizosphere	LAGTDWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD*
Ga0182038_112625461	3300016445	Soil	ASDPLAASDWYVRVFDFAPLLIEEREDEVTAVLLQHPCGARVMLRSSADPLAALRGYPLFSLSVADHDELLRWAERLTALDVEHSDVHEAHLGWAVTVIGPDLVRIQLHTAEGPSGEVE
Ga0187802_100801593	3300017822	Freshwater Sediment	WYVRVFDFVALLVEERENEVSAVLLQHPCGARLMLRSSADPLAALRGYPLFSLSVANHDELLRWAGHLTTLDVEHNGVHQAHLGWAVTVTGPDLVHIQLHTEEGPSGEVE
Ga0187820_10563062	3300017924	Freshwater Sediment	VTVGARFNELSRGGKNNQVPLLIGLHHVTVPSSDPVAASDWYVRVFDFAALLIAELENEVTAVLLQHSCGARLLLRRAAEPLATLRGYPLFGLSVANHDELLRWAGHLTTLDVEHNGVHQAHLGWAVTVTGPDLVHIQLHTEEGPSGEVE
Ga0187879_101641691	3300017946	Peatland	PSSDPLAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLLGAAEPLAAFRGYPLFGLSVANHDELLRWVERLTTFDVEHSGVHQAHLGWAVTVTGPDLVHIQLHTDEGPSGEDE
Ga0187885_101684192	3300018025	Peatland	LSRGGKNNRVPLLIGLHHVTVPSSDPLAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLLRAAEPLAALRGYPLFGLSVANHDELLRWVERLTTFDEEQSGVHQAHLGWAVTVTGPDLVHIQLHTDEGPSGEDE
Ga0187869_104569791	3300018030	Peatland	MRWVGVDEVAGGGKNRRVPTFTRLHHVSVPTRDPLASSDWFERVLGFTTLLIEEHENDVVTVLLQHACGARLLLRRAEIPLAALREYPLFALGVASYTELLDWEEHLTTVDAEHSAVHAAHLGWAVTVTGPDLILIELRTDDGPSGEDE
Ga0187887_102200591	3300018043	Peatland	MRWVGVDEVAGGGKNRRVPTFTRLHHVSVPTRDPLASSDWFERVLGFTTLLIEEHENDVVTVLLQHACGARLLLRRAEIPLAALREYPLFALGVASYTELLDWEEHLTTVDAEHSAVHAAHLGWAVTVTGPDLILIELRTDD
Ga0187858_106968321	3300018057	Peatland	IDPLAASDRYVRVLDFAALLMEERESEVVAVLLQHPCSARLLLRRAASPLAALGGYPLLGLTVASYTELLHWVEHLTTLKVEHSLVHQAHPGWAVTLTGPDLVVFSSKQTRDRVAKTSRRFGRGR
Ga0182031_15515152	3300019787	Bog	MRWVGVDEVAGGGKNRRVPTFTRLHHVSVPTRDPLASSDWFERVLGFTTLLIEEHENDVVTVLLQHACGARLLLRRGEIPLAALREYPLFALGVASYTELLDWEEHLTTVDAEHSAVHAAHLGWAVTVTGPDLILIELRTDDGPSGEDE
Ga0210406_109859572	3300021168	Soil	VLIEERESEVVTVLLQHPCGARLLLRRAAAPVVASREYPWFGLTIASYAELERWVQHLTALDVEHSAVHQAHPGWAVTVTGPDLVGIQLQTDEGPSGEGD
Ga0210400_107879232	3300021170	Soil	DFAALLMEERESDVMAVLLQHPCGIRLLLRRAAAPLATLRGYPLFGLTVPSYTELQHWVEHLTTLNVEHSAVHQAHPGSAVTLTGPDLVRIQLQTDEGPSGEDE
Ga0213872_103680701	3300021361	Rhizosphere	LAASDWYVRVFDFTELLVEELENEVTAVLLEHRCGVRLLLRRADEPLTALRGYPLFGLSVANHDELLRWVEHFTTFDVEHNDVHRAHLGWAVTVTGPDLVRIQLHTDEGPSGEGE
Ga0233356_10127541	3300023046	Soil	EERESEVVAVLMQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWAEHLTKFDVEHGGVRQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE
Ga0224557_10077601	3300023101	Soil	MPLLTAIHHVSVPASDPVACSDWWVRVFGFATVLIEERETEVVTVLLQHPCGVRLLLRRAAAPVVGLPEYPLFGLTVASYAELLRWVEHLTTLEVEHSAVHQAHPGAAVTVTGPDLVRIQLQTDEGPSGEDE
Ga0207692_105273511	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGED
Ga0207642_101004081	3300025899	Miscanthus Rhizosphere	DPLAGTDWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD
Ga0207699_104250371	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTDPLACSDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAAAPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTITGPDLVRIQLQTDEGPSGED
Ga0207669_108945912	3300025937	Miscanthus Rhizosphere	TDWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD
Ga0207665_102106092	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEESENEVAAVLLQHPCGIRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD
Ga0207640_108435012	3300025981	Corn Rhizosphere	SDWYVRIFDFAALLIEESESEVVAVLLQHPCGVRLLLRRAAAPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVLQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE
Ga0207658_101149567	3300025986	Switchgrass Rhizosphere	PLAGTDWYVQVFGFSALLMEESENEVAAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSYTELQHWEEHLSSSEVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGDDD
Ga0207678_107165571	3300026067	Corn Rhizosphere	MPTTDPLADSDWYARVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGED
Ga0207708_108527192	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PTTDPLAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTSFGVEHGAVHLAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE
Ga0207648_101716211	3300026089	Miscanthus Rhizosphere	SESEVVAVLLQHPCGVRLLLRRAATPLAALREFPLFGLTVPSYTELQHWVEHLTTFDVEHSVVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE
Ga0208983_10080642	3300027381	Forest Soil	MLTGLNHVTVPTSDPLVASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPMAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHEAHPGWAVTLTGPDLVRIQLQTAAGPSGEDE
Ga0208984_10364102	3300027546	Forest Soil	MLTGLNHVTVPTSDPLAASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPMAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHEAHPGWAVTLTGPDLVRIQLQTAAGPSGEDE
Ga0209905_10057982	3300027634	Thawing Permafrost	MPLLTAIHHVSVPASDPVACSDWWVRVFGFATVLIEERETEVVTVLLQHPCGVRLLLRRAAAPVVGLPEYPLFGLTVASYAELLRWVEHLTTLEVEHSAVHQAHPGAAVTVTGPDLVRIQLQTDEGPSGEDD
Ga0208991_10578931	3300027681	Forest Soil	DPLAASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPMAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHEAHPGWAVTLTGPDLVRIQLQTAAGPSGEDE
Ga0137415_100744152	3300028536	Vadose Zone Soil	MLTGLNHVTVPTSDPLAASDWYVRVFDFAALLMEEHENEVVAVLLQHPCGARLLLRRTDAPVAALREYPSFGLTVASYTELQHWGEHLTTFDVEHSVVHEAHPGWAVTLTGPDLVRIQLQTAAGPSGEDE
Ga0247828_108101461	3300028587	Soil	VLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE
Ga0247828_111865271	3300028587	Soil	MEESESEVVAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSFTELQHWEEHLSSSGVEHSAVHRAHPGWAVTVTGPDLVRIQLQTDDGPGGGDD
Ga0247824_105608721	3300028809	Soil	VQVFGLTALLMEESESEVVAVLLQHPCGVRLLLRRAAAPLPALRGFPLFGLTVPSFTELQHWEEHLSSSGVEHSAVHQAHPGWAVTVTGPDLVRIQLQTDDGPGGGDD
Ga0311337_107349811	3300030000	Fen	GSDWYVRVFGFATLLIEEHESDVVAVLLQHPCGARLLLRRAAAPLTALHGSPLFAFSVASYTELVHWVEHLTTVDAEHSAVHPAHPGWAVTVTGPDLILIQLRTDEGPSGEDD
Ga0311350_112683011	3300030002	Fen	DPLAGSDWYVRVFGFATLLIEEHESDVVAVLLQHPCGARLLLRRAAAPLTALHGSPLFAFSVASYTELVHWVEHLTTVDAEHSAVHPAHPGWAVTVTGPDLILIQLRTDEGPSGEDD
Ga0310038_103363382	3300030707	Peatlands Soil	GKNNRVPLLIGLHHVTVPSSDPLAASDWYVRVFDFAALLIEERENEVTAVLLQHPCGARLLLRRAAEPLATLRGYPLFGLSVANQHELLRWVEHLTTFDVEHSGLHEAHLGWAVTVIGPDLVRIQLHTDEGPSAEDE
Ga0318535_104384111	3300031764	Soil	YVRVFDFAPLLIEEREDEVTAVLLQHPCGARVMLRSSADPLAALRGYPLFSLSVADHDELLRWAERLTALDVEHSDVHEAHLGWAVTVIGPDLVRIQLHTAEGPSGEVE
Ga0310910_109402622	3300031946	Soil	FAPLLIEEREDEVTAVLLQHPCGARVMLRSSADPLAALRGYPLFSLSVADHDELLRWAERLTALDVEHSDVHEAHLGWAVTVIGPDLVRIQLHTAEGPSGEVE
Ga0306926_126783141	3300031954	Soil	SDPLAASDWYVRVLDFAPLLIEEREDEVTAVLLQHPCGARVMLRSSADPLAALRGYPLFSLSVADHDELLRWAERLTALDVEHSDVHEAHLGWAVTVIGPDLVRIQLHTAEGPSGEVE
Ga0307479_112658001	3300031962	Hardwood Forest Soil	DWYVRVFGFATVLIEERETEVVTVLLQHPCGVRLLLRRAAAPVVGLPEYPLFGLTVPSYTELQHWVEHLTTLDVEHSAMHRAHPGSAVTLTGPDLVRIQLQTDEGPSGEDE
Ga0318505_105054901	3300032060	Soil	LAASDPLAASDWYVRVFDFAPLLIEEREDEVTAVLLQHPCGARVMLRSSADPLAALRGYPLFSLSVADHDELLRWAERLTALDVEHSDVHEAHLGWAVTVIGPDLVRIQLHTAEGPSGEV
Ga0307472_1014073111	3300032205	Hardwood Forest Soil	LAGSDWYVRVFDFAAVLIEERESEVVAVLLQHPCGVRLLLRRTAAPLAALREYPLFGLTVASYTELQHWVEHLTTFDVEHGAVHQAHRGWAVTVTGPDLVRIQLQTDEGPSGEDE
Ga0370501_0134822_325_696	3300034195	Untreated Peat Soil	VSVPASDPIVASDWYVRVFGFVNLLIEEHETGVAAVLLQHPCGARVLLRRAPTPLAALRGYPLLALSVASHTELLNWVNHLATFDVEHSAIHQAHLGWAVTVTGPDQLCIQLRTDEGPSGEDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086106

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences