Metagenome Family F086096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086096
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	110 residues
Representative Sequence	MTDIGRSRRIWRRSFFILLGVSVVVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVLSR
Number of Associated Samples	87
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.07 %
% of genes near scaffold ends (potentially truncated)	31.53 %
% of genes from short scaffolds (< 2000 bps)	79.28 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.622 % of family members)
Environment Ontology (ENVO)	Unclassified (32.432 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.054 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.14% β-sheet: 14.29% Coil/Unstructured: 43.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF16344	DUF4974	24.32
PF04773	FecR	7.21
PF01263	Aldose_epim	5.41
PF12867	DinB_2	2.70
PF01636	APH	1.80
PF13414	TPR_11	0.90
PF12704	MacB_PCD	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	5.41
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	5.41

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	91.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	91.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	78.38 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	13.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.38 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	13.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.38 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	13.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.38 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	12.61 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.38 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	12.61 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10229641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300001686\|C688J18823_10003687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	9684	Open in IMG/M
3300002568\|C688J35102_120968494	All Organisms → cellular organisms → Bacteria	3595	Open in IMG/M
3300002916\|JGI25389J43894_1020057	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1159	Open in IMG/M
3300003267\|soilL1_10019465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4787	Open in IMG/M
3300004081\|Ga0063454_102010964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300004479\|Ga0062595_100296432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1086	Open in IMG/M
3300005171\|Ga0066677_10635602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300005175\|Ga0066673_10578449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	655	Open in IMG/M
3300005177\|Ga0066690_10285102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1113	Open in IMG/M
3300005178\|Ga0066688_10104781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1732	Open in IMG/M
3300005187\|Ga0066675_10007441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5571	Open in IMG/M
3300005434\|Ga0070709_10003199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8792	Open in IMG/M
3300005434\|Ga0070709_10012002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4844	Open in IMG/M
3300005434\|Ga0070709_11089241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	639	Open in IMG/M
3300005435\|Ga0070714_100059313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3281	Open in IMG/M
3300005436\|Ga0070713_100116056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2341	Open in IMG/M
3300005437\|Ga0070710_10008917	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4896	Open in IMG/M
3300005437\|Ga0070710_10062649	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300005446\|Ga0066686_10263149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1166	Open in IMG/M
3300005451\|Ga0066681_10418844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	823	Open in IMG/M
3300005454\|Ga0066687_10012189	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3364	Open in IMG/M
3300005458\|Ga0070681_10018125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7039	Open in IMG/M
3300005535\|Ga0070684_100436786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1209	Open in IMG/M
3300005536\|Ga0070697_100285302	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005539\|Ga0068853_102128153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300005540\|Ga0066697_10428444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300005545\|Ga0070695_101027770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300005545\|Ga0070695_101279818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	605	Open in IMG/M
3300005558\|Ga0066698_10156934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1540	Open in IMG/M
3300005560\|Ga0066670_10847442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300005561\|Ga0066699_10003788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6339	Open in IMG/M
3300005561\|Ga0066699_10142941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1624	Open in IMG/M
3300005562\|Ga0058697_10663476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300005566\|Ga0066693_10054307	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1347	Open in IMG/M
3300005614\|Ga0068856_100473271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1274	Open in IMG/M
3300005614\|Ga0068856_101664930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	651	Open in IMG/M
3300005834\|Ga0068851_10860049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300005885\|Ga0075284_1011348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1013	Open in IMG/M
3300006028\|Ga0070717_11395472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	636	Open in IMG/M
3300006028\|Ga0070717_11625036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300006032\|Ga0066696_10767975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300006046\|Ga0066652_100141580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2004	Open in IMG/M
3300006173\|Ga0070716_100387372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1001	Open in IMG/M
3300006755\|Ga0079222_10036388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2161	Open in IMG/M
3300006755\|Ga0079222_10757956	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	782	Open in IMG/M
3300006755\|Ga0079222_11617749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300006794\|Ga0066658_10057898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1690	Open in IMG/M
3300006794\|Ga0066658_10504098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300006794\|Ga0066658_10657648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300006800\|Ga0066660_11262994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300006804\|Ga0079221_10351024	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300006804\|Ga0079221_10502682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	787	Open in IMG/M
3300006804\|Ga0079221_10562442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	758	Open in IMG/M
3300006804\|Ga0079221_10699384	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300006806\|Ga0079220_10162401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1247	Open in IMG/M
3300006806\|Ga0079220_10301855	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300006806\|Ga0079220_11864309	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300006854\|Ga0075425_100229404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2136	Open in IMG/M
3300006871\|Ga0075434_102267698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300006904\|Ga0075424_100360886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1548	Open in IMG/M
3300006904\|Ga0075424_101068640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	860	Open in IMG/M
3300006914\|Ga0075436_101529544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300007076\|Ga0075435_101992657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300009012\|Ga0066710_101544390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1021	Open in IMG/M
3300009137\|Ga0066709_101917799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	824	Open in IMG/M
3300009551\|Ga0105238_11074662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300009551\|Ga0105238_12632469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300010359\|Ga0126376_10852069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	896	Open in IMG/M
3300010366\|Ga0126379_10506238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1280	Open in IMG/M
3300010373\|Ga0134128_11754982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	683	Open in IMG/M
3300010399\|Ga0134127_12123545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300012198\|Ga0137364_10991050	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M
3300012200\|Ga0137382_10673211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300012212\|Ga0150985_104837726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1864	Open in IMG/M
3300012212\|Ga0150985_109314798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1022	Open in IMG/M
3300012212\|Ga0150985_117075788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1134	Open in IMG/M
3300012469\|Ga0150984_115366000	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300012958\|Ga0164299_11058823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300012972\|Ga0134077_10423982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300012975\|Ga0134110_10150736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300013307\|Ga0157372_10563886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1327	Open in IMG/M
3300013307\|Ga0157372_11428504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	797	Open in IMG/M
3300014487\|Ga0182000_10013038	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300018482\|Ga0066669_10534888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1019	Open in IMG/M
3300021445\|Ga0182009_10401861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300025898\|Ga0207692_10048700	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300025898\|Ga0207692_10748107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300025912\|Ga0207707_10326449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1324	Open in IMG/M
3300025928\|Ga0207700_10002834	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9973	Open in IMG/M
3300025928\|Ga0207700_10116651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2158	Open in IMG/M
3300025988\|Ga0208141_1014127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	715	Open in IMG/M
3300026036\|Ga0208650_1058962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300026078\|Ga0207702_10182028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1936	Open in IMG/M
3300026300\|Ga0209027_1036412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1857	Open in IMG/M
3300026308\|Ga0209265_1233717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300026310\|Ga0209239_1148490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	935	Open in IMG/M
3300026315\|Ga0209686_1232009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300026325\|Ga0209152_10026831	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1973	Open in IMG/M
3300026331\|Ga0209267_1217331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	714	Open in IMG/M
3300026536\|Ga0209058_1093633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1540	Open in IMG/M
3300026537\|Ga0209157_1129116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1160	Open in IMG/M
3300026547\|Ga0209156_10022231	All Organisms → cellular organisms → Bacteria	3767	Open in IMG/M
3300027725\|Ga0209178_1178992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300027765\|Ga0209073_10339266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300027765\|Ga0209073_10501872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300028881\|Ga0307277_10161402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	974	Open in IMG/M
3300030511\|Ga0268241_10048132	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	909	Open in IMG/M
3300031938\|Ga0308175_100148992	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300032174\|Ga0307470_11222858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300034268\|Ga0372943_0010676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4771	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.98%
Host-Associated	Host-Associated	18.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.98%
Plants	Host-Associated → Plants	18.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.21%
Phylloplane	Host-Associated → Plants → Phylloplane	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.95%
Loam	Environmental → Terrestrial → Soil → Loam	24.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.01%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	11.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026036	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_102296411	3300001305	Soil	MTDIGRSRRLWRRGFFILLGVSVVVIGILTIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVTIGNLTF
C688J18823_100036877	3300001686	Soil	MTDIGRSRRLWRRGFFILLGVSVVVIGILTIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVTIGNLTFYFAKGGRLDRVSSGK*
C688J35102_1209684944	3300002568	Soil	LGVSVVVIGILTIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVTIGNLTFYFAKGGRLDRVSSGK*
JGI25389J43894_10200571	3300002916	Grasslands Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVLSR*
soilL1_100194652	3300003267	Sugarcane Root And Bulk Soil	MTDIGRSRRLWRRGFFILLGFSVAVIGILLLSRSDRKVSYARESDDAAGQSLEIVAGVLIAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGSLTFHFAKTGRLERVTSNR*
Ga0063454_1020109641	3300004081	Soil	MTDIGRSRRLWRRGFFVLLGVSVVVIGILLIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSTVLKSLRHDNPRARILATDSTVAIGNLTFYFAKSGRLDRVSSGK*
Ga0062595_1002964321	3300004479	Soil	LLGVSVVVVGTLLIARSDRKVSYAREGPDAAQQNLDLVAHILEQQQPPANRATVLRVLRHDNPKARILATDTTVTMGSLTFVFAKNGRLERVSTR*
Ga0066677_106356021	3300005171	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLER
Ga0066673_105784492	3300005175	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKMSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGRLERVMAR*
Ga0066690_102851022	3300005177	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQEQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVLSR*
Ga0066688_101047812	3300005178	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQEQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVMAR*
Ga0066675_100074414	3300005187	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGMLLIVRPDKKVSYAGESHDTAEQSLEIVARVLEQQQPPATRANVLKLLRHDKPKARIMATDTTVSIGNLTFHFAKNGRLGHVAVR*
Ga0070709_100031996	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRIWRRSFFILLGASVVVIGSLLIGRSDKKVSYALESQDRAQQSVEVLTRLLEEQQPPATRSTILKSLRHDNPKAKILATDTTVSLGSLTFYFAKSGRLERVASSR*
Ga0070709_100120022	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRIWRQSFFILLGASVLVIGILLIARSDKKVTYASESQDRAQQSVEMLARLVEAQQPPVTRSNLLKVLRHDNPKAKIFATDTTVALGSVTFYFAKSGRLERVATTR*
Ga0070709_110892411	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGQSRRIWRRSFFILLGLSVVVIGILLIARSDKKVSYARESSEGAEQNLAIVARVLEEQQPPATRSGVLKILRHDNPKARIFATDSTVAIGNVTFVFAKTGKLERVTTH*
Ga0070714_1000593133	3300005435	Agricultural Soil	MTDIGRSRRLWRRAFFILLGASVVVIGILLIARSDRKVSYAGESQDALEQNLEVVARLLEAQQPPATRSSVLKSLRHDNPRAKILATDTTVSIGSLTFFFAKSGRLERVASSER*
Ga0070713_1001160562	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRIWRRSFFTLLGVSVVVVGSLLIARSDRKVSYAREGPDAAQQNLEMVAHILEQQQPPANRSTVLRVLRRDNPKGRIFATDTSVTMGNLTFMFAKTGKLERVVTR*
Ga0070710_100089174	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRIWRQSFFILLGASVLVIGILLIARSDKKVTYASESQDRAQQSVEMLARLVEAQQPPVTRSNLLKVLRHYNPKAKIFATDTTVALGSVTFYFAKSGRLERVATTR*
Ga0070710_100626493	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RIWRRSFFILLGASVVVIGSLLIGRSDKKVSYALESQDRAQQSVEVLTRLLEEQQPPATRSTILKSLRHDNPKAKILATDTTVSLGSLTFYFAKSGRLERVASSR*
Ga0066686_102631492	3300005446	Soil	MTDIGRSRRQWRQAFFILLGVAVVVVGGLMIAVADKKVSYAGERESHDEAQQDLAVVARLLEEQQPPASRSSVLRILRRDNPKARIFATDTTVSIGGLTFVFSRAGRLEQVLHHSP*
Ga0066681_104188442	3300005451	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQEQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGRLERVMAR*
Ga0066687_100121893	3300005454	Soil	MTDIGRSRRIWRRSFFILLGVSVVVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVLSR*
Ga0070681_100181256	3300005458	Corn Rhizosphere	MTDIGRSRRLWRRGFFILLGVSVAVIGILLLSRSDRKVSYARESDDAAGQSLEIVARVLVAQQPPANRSTVLKSLRHDNPRARILATDSTVSIGSLTFYFAKNGRLERVSSGK*
Ga0070684_1004367861	3300005535	Corn Rhizosphere	MTDIGRSRRLWRRGFFALLGVSVVVIGILLIARSDRKVSYARESDDAAGQSLEIVTRVLLAQQPPATRSSVLKSLRHDNPRARILATDSTVSIANLTF
Ga0070697_1002853022	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRIWRRSFFILLGVSVVVIGSLLIARSDKKVSYAGESRDTAEQSLGIVARLLEEQQPPATRSSVLKILRHDNPKARILATDTSVTIGALTFLFAKNGRLERVLGGR*
Ga0068853_1021281531	3300005539	Corn Rhizosphere	MTDIGRSRRLWRRGFFALLGVSVVVIGILLIARSDRKVSYARESDDAAGQSLEIVTRVLLAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGSLTFYFAKNGRLERVSSGK*
Ga0066697_104284441	3300005540	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQSLEIVARVLQEQQPPATRSNVLKALRHDNPKARIFATDTTVSIGGLTFHFARTGKLERVTSR*
Ga0070695_1010277702	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRIWRRSFFILLGVSVVVIGSLLIARSDKKVSYAGESRDTAEQSLGIVARLLEEQQPPATRSSVLKILRHDNPKARILATDTSVTIGALT
Ga0070695_1012798183	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRLWRRGFFILLGVSVGVIGILLLSRSDRKVSYARESDDAAGQSLEIVARVLVAQQPPANRSTVLKSLRHDNPRARILATDSTVSIGSLTFYFAKNGRLERVSSGK*
Ga0066698_101569342	3300005558	Soil	QFAMTDIGRSRRQWRQAFFILLGVAVVVVGGLMIAVADKKVSYAGERESHDEAQQDLAVVARLLEEQQPPASRSSVLRILRRDNPKARIFATDTTVSIGGLTFVFSRAGRLEQVLHHSP*
Ga0066670_108474421	3300005560	Soil	MTDIGQSRRIWRRSFFILLGVSVVVIGFLLIVRPDKKVSYAGESRDTVEQSLEIVARVLEQQQPPAMRSNVLKILRHENPRARILASDSTVSIGTLTFYFAKNGRLER
Ga0066699_100037882	3300005561	Soil	MTDIGRSRRIWRRSFFILLGVSVVVIGILLIARTDKKVSYARESPDSAEQNLAIVARILEEQQPPAMRSTVLKVLRHDNPKARILATDSTVTIGNLIFLFAKNGKLERVTAR*
Ga0066699_101429412	3300005561	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGRLERVMAR*
Ga0058697_106634761	3300005562	Agave	MTDIGRSRRLWRRGFFVLLGVSIVVIGILMIARSDRKVSYARESDDVAEQSLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGNLLFWFAKSGRLERVTSVK*
Ga0066693_100543072	3300005566	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKMSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLRVLRRDNPKARILATDTTVSIGNLTFLFARNGRLERVMAR*
Ga0068856_1004732712	3300005614	Corn Rhizosphere	MTDIGRSRRLWRRGFFALLGVSVVVIGILLIARSDRKVSYARESDDAAGQSLEIVTRVLLAQQPPATRSSVLKSLRHDNPRARILATDSTVSIANLTFYFAKNGRLERVTPNK*
Ga0068856_1016649302	3300005614	Corn Rhizosphere	MTDIGRSRRLWRRGFFVLLGVSVVVIGTLLIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGNLTFYFAKNGRLERVTPEK*
Ga0068851_108600492	3300005834	Corn Rhizosphere	SRTGCLRQDRLRGWIMTDIGRSRRLWRRGFFALLGVSVVVIGILLIARSDRKVSYARESDDAAGQSLEIVTRVLLAQQPPATRSSVLKSLRHDNPRARILATDSTVSIANLTFYFAKNGRLERVTPNK*
Ga0075284_10113482	3300005885	Rice Paddy Soil	MTDIGRSRRIWRRSFFILLGVSLAVIAIMLIVRTDRKVSYAGESDDRARENMEIVTRLLEEQQPPTNRSNVLRILRRQNPTAKIFATDTTVMIGDLTFFFAKNGRLERVQEAARR*
Ga0070717_113954722	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	WRRSFFILLGASVVVIGSLLIARSDKKVSYALESQDRAQQSVEVLARLLEEQQPAATRSSVLKVLRRDNPKAKIFATDTTVALGSLTFHFARNGRLERVTSAR*
Ga0070717_116250362	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QSFFILLGASVLVIGILLIARSDKKVTYASESQDRAQQSVEMLARLVEAQQPPVTRSNLLKVLRHDNPKAKIFATDTTVALGSVTFYFAKSGRLERVATTR*
Ga0066696_107679751	3300006032	Soil	GRSRRIWRRSFFILLGVSVAVIGMLLIVRPDKKVSYAGESHDTAEQSLEIVARVLEQQQPPATRANVLKLLRHDKPKARIMATDTTVSIGNLTFHFAKNGRLGHVAVR*
Ga0066652_1001415802	3300006046	Soil	MTDIGRSRRLWRQSFFILLGVSVLVIGILLIVRTDRKVSYARESPGAAEQNLEIVARILEEQQPPATRSAVLRALRHDNPKAKIFATDTTVMIGNLTFQFAKNGRLERVAAK*
Ga0070716_1003873722	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGQSRRIWRRSFFILLGLSVVVIGILLIARSDKKVSYARESSEGAEQNLAIVARVLEEQQPPATRSAVLKILRHDNPKARIFATDSTVAIGNVTFVFAKTGKLERVTTH*
Ga0079222_100363882	3300006755	Agricultural Soil	MTDIGRSRRIWRRSFFILLGVSVVVVGILLIARTDKKVSYAREGPNGVEQNLEIIARLLEEQQPPATRAGVLRVLRHDNPKAKIFATDSTVSIGNLTFVFAKSGKLERVQAR*
Ga0079222_107579562	3300006755	Agricultural Soil	IMTDIGRSRRLWRRGFFALLGVSVVVIGSLLIARSDRKVSYARESNDVAGQNLEIVARVLLSQQPPATRSSVLKSLRHDNPRARILATDSTVSIGNLTFSFAKNGRLERVTPGK*
Ga0079222_116177491	3300006755	Agricultural Soil	MTDIGRSRRIWRRSFFVLLGISVLVIGILLIARSDRKVSYAREGPDAAQQNLEIMAHVLEAQQPPANRSTVLRVLRHDNPKARILATDTTVTMGSLTFVFAKNGKLERVTTH*
Ga0066658_100578982	3300006794	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEKNLEIVARALQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARSGKLERVLSR*
Ga0066658_105040982	3300006794	Soil	LGASIVVIGSLLIARSDRKVSYAGESHDAAEQNLEIVARVLTAQQPPATRSTVLKSLRHDYPRARILATDTTVTLGNLIFYFGKGGRLERVESGK*
Ga0066658_106576482	3300006794	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQSLEIVARLLEQQQPPATRSNVLKVLRHDNPRARILATDSTVAIGNVSFVFAKTGRLERVITAK*
Ga0066660_112629941	3300006800	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARSGKLERVLSR*
Ga0079221_103510242	3300006804	Agricultural Soil	MTDIGRSRRLWRRSFFILLGVSAVVITILLLSRTDRKVSYAGESQDILREDFSVVARLLEEQQPPTTRATVLRVLRRENPKGRILATDSTVTMGDVIFHFAKTGRLQRVEKIER*
Ga0079221_105026821	3300006804	Agricultural Soil	MTDIGRSRRLWRRGFFILLGVSIVVVGALLLARSDKKVSYASESHDAAEQNLEIVARVLLAEQPSATRSSVLKSLRHDNPRAKILATDTTVSIGTLTFYFAKNGRLERVAQSAAR*
Ga0079221_105624422	3300006804	Agricultural Soil	PGWIMTDIGRSRRIWRRSFFILLGASVVVIGSLLIARSDKKVSYALESQDRAQQSVEVLARLLEEQQPAATRSSVLKVLRRDNPKAKIFATDTTVALGSLTFHFARNGRLERVTSAR*
Ga0079221_106993841	3300006804	Agricultural Soil	RLAMTDIGRSRRIWRRSFFTLLGVSVVVVGTLLIARSDRKVSYAREGPDAAQQNLDIVAHILEQQQPPANRATVLRVLRHDNPKARILATDTTVTMGSLTFVFAKNGKLERVSTR*
Ga0079220_101624011	3300006806	Agricultural Soil	MTDIGRSRRIWRRSLFILLGVSVVVVGILLIARTDKKVSYAREGPNGVEQNLEIIARLLEEQQPPATRAGVLRVLRHDNPKAKIFATDSTVSIGNLTFVFAKSGKLERVQAR*
Ga0079220_103018552	3300006806	Agricultural Soil	MTDIGRSRRLWRRGFFALLGVSVVVIGSLLIARSDRKVSYARESNDVAGQNLEIVARVLLSQQPPATRSSVLKSLRHDNPRARILATDSTVSIGNLTFSFAKNGRLERVTPGK*
Ga0079220_118643091	3300006806	Agricultural Soil	MTDIGRSRRIWRRSFFTLLGVSVVVVGTLLIARSDRKVSYAREGPDAAQQNLDLVAHILEQQQPPANRATVLRVLRHDNPKARILATDTTVTMGSLTFVFAKNGKLERVSTR*
Ga0075425_1002294042	3300006854	Populus Rhizosphere	MTDIGRSRRIWRRSFFILLGVSVVIVGSLLLARTDKKVSYAREGPNGAEQNLAIIARLLEEQQPPATRSGVLKILRHDNPKAKIFATDSTVSIGNLTFVFAKSGKLERVQSP*
Ga0075434_1022676981	3300006871	Populus Rhizosphere	MTDIGRSRRLWRRAFFILLGVSVVLISILLIARSDRKVSYAGESNDSAEQGFEIVARLLEQQQPPATRSNVLKVLRQRNPKARILATDTTVTLGSVTFFFAKSGRLERVSSK*
Ga0075424_1003608862	3300006904	Populus Rhizosphere	MTDIGRSRRIWRRSFFILLGISVVVIGILLIARSDRKVSYAREGPDAAQQNLEIMAHVLEAQQPPANRSTVLRVLRHDNPKARILATDTTVTMGSLTFVFARNGKLERVTTH*
Ga0075424_1010686401	3300006904	Populus Rhizosphere	MTDIGRSRRLWRRGFFVLLGVSVVVIGILLIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPANRSTVLKSLRHDNPRARILATDSTVSIGSLTFYFAKNGRLERVSSGK*
Ga0075436_1015295442	3300006914	Populus Rhizosphere	LGASVVVIGSLLIARSDKKVSYALESQDRAQQSVEVLARLLEEQQPAATRSSVLKVLRRDNPKAKIFATDTTVALGSLTFHFARNGRLERVTSAR*
Ga0075435_1019926571	3300007076	Populus Rhizosphere	MTDIGRSRRIWRRSFFILLGVSVVIVGSLLLARTDKKVSYAREGPNGAEQNLEIIARLLEEQQPPATRSGVLKILRHDNPKAKIFATDSTVSIGNLTFVFAKSGKLERVQSP*
Ga0066710_1015443901	3300009012	Grasslands Soil	MTDIGRSRRQWRQAFFILLGVAVVVVGGLMIAVADKKVSYAGERESHDEAQQDLAVVARLLEEQQPPASRSSVLRILRRDNPKVRIFATDTTVSIGGLTFVFSRAGRLEQVLHHSP
Ga0066709_1019177991	3300009137	Grasslands Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGMLLIVRPDKKVSYAGESHDTAEQSLEIVARVLEQQQPPATRANVLKLLRHDKPKARIMATDTTVSIGNLT
Ga0105238_110746622	3300009551	Corn Rhizosphere	MTDIGRSRRLWRRGFFILLGVSVAVIGILLLSRSDRKVSYARESDDAAGQSLEIVARVLVAQQPPANRSTVLKSLRHDNPRARILATDSTVSIGSLTFYFA
Ga0105238_126324692	3300009551	Corn Rhizosphere	MTDIGRSRRLWRRGFFALLGVSVVVIGTLLIARSDRKVSYARESDDAAGQSLEIVTRVLLAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGSLTFYFA
Ga0126376_108520691	3300010359	Tropical Forest Soil	MTDIGRSRRIWRRSFFALLGVSVFVIGTLLISRTDKKVSYAREGPDGAEQSLQIVSRLLEEQQPPATRATVLKVLRHDNPKARILATDTTVMIGNLTFVFAKTGKLERVTTH*
Ga0126379_105062382	3300010366	Tropical Forest Soil	MTDIGRSRRIWRRSFFALLGVSVIVISTLLIARTDKKVSYAREGPNGVEQSLEIVSRLLEEQQPPATRATVLKVLRHDNPKARILATDTTVMIGNLTFVFAKTGKLERVTAH*
Ga0134128_117549821	3300010373	Terrestrial Soil	MTDIGRSRRLWRRGFFVLLGVSVVVIGTLLIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARIIATDSTVSIGNLTFYFAKNGRLERVTPEK
Ga0134127_121235452	3300010399	Terrestrial Soil	MTDIGRSRRLWRRGFFVLLGVSVVVIGTLLIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGNLTFYFAKNGRLERVSSGK*
Ga0137364_109910501	3300012198	Vadose Zone Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDMKMSYAGESHYTAEQNLEIVPRVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGRLERVMAR*
Ga0137382_106732112	3300012200	Vadose Zone Soil	MTDIGQSRRIWRRSFFILLGLSVVVIGILLIARTDKKVSYARESSDGAEQNLAIVARVLEEQQPPATRSGVLKILRHDNPKARIFATDSTVAIGNVTFVFAKTGKLERVTTH*
Ga0150985_1048377262	3300012212	Avena Fatua Rhizosphere	MTDIGRSRRVWRRSFFILLGVSVAVIGFLLIVRPDKKVSYAGESRDTVEQSLELVARVLEQQQPPATRSNVLKILRHENPRARILASDTTVSIGNLTFYFAKSGRLERVGTTK*
Ga0150985_1093147981	3300012212	Avena Fatua Rhizosphere	MTDIGRSRRLWRRGFFILLGVSVVVIGILTIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVTIG
Ga0150985_1170757881	3300012212	Avena Fatua Rhizosphere	RGFFILLGVSVGVIGILTIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVTIGNLTFYFAKSGRLDRVSSGK*
Ga0150984_1153660001	3300012469	Avena Fatua Rhizosphere	IGRSRRLWRQGFFILLGVSVAVIGILLIARSDRKGRYARERGDAAGLNLEIVARRLVSPQPPANRSTVLKSLRHDNPRARILATDSTVSIGNLTFYFAKNGRLDRVASSK*
Ga0164299_110588232	3300012958	Soil	FFILLGLSVVVVGILLIARSDKKVSYARESSEGAEQNLAIVARVLEEQQPPATRSGVLKILRHDNPKARIFATDSTVAIGNVTFVFAKTGKLERVTTH*
Ga0134077_104239821	3300012972	Grasslands Soil	SFQFAMTDIGRSRRQWRQAFFILLGVAVVVVGGLMIAVADKKVSYAGERESHDEAQQDLAVVARLLEEQQPPASRSSVLRILRRDNPKARIFATDTTVSIGGLTFVFSRAGRLEQVLHHSP*
Ga0134110_101507362	3300012975	Grasslands Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHETAEQSLEIVARVLQEQQPPATRSNVLKALRHDNPKARIFATDTTVSIGGLTFHFARTGKLERVTSR*
Ga0157372_105638862	3300013307	Corn Rhizosphere	MTDIGRSRRLWRRGFFVLLGVSVVVIGTLLIARSDRKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGNLTFYFAKNGRLERVTPQK*
Ga0157372_114285042	3300013307	Corn Rhizosphere	MTDIGRSRRIWRQSFFILLGVSVLVIGILLIARSDKKVTYASESQDRAQQSVEMLARLVEAQQPPVTRSNLLKVLRHYNPKAKIFATDTTVALGSVTFYFAKSGRLERVATTR*
Ga0182000_100130382	3300014487	Soil	MTDIGRSRRLWRQSFFILLGVSVVVIGILLIVRPDKKVSYAGESRDTAEQGVGIVAKLLEEQQPPATRSNILKLLRHDNPRARIFATDTTVAIGSLTFFFSKNGRLERVMTGNR*
Ga0066669_105348881	3300018482	Grasslands Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKMSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVLSR
Ga0182009_104018612	3300021445	Soil	MTDIGRSRRLWRRGFFALLGVSVVVIGILLIARSDRKVSYARESDDAAGQSLEIVTRVLLAQQPPATRSSVLKSLRHDNPRARILATDSTVSIANLT
Ga0207692_100487001	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GRSRRIWRRSFFILLGASVVVIGSLLIGRSDKKVSYALESQDRAQQSVEVLTRLLEEQQPPATRSTILKSLRHDNPKAKILATDTTVSLGSLTFYFAKSGRLERVASSR
Ga0207692_107481072	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RIWRQSFFILLGASVLVIGILLIARSDKKVTYASESQDRAQQSVEMLARLVEAQQPPVTRSNLLKVLRHYNPKAKIFATDTTVALGSVTFYFAKSGRLERVATTR
Ga0207707_103264492	3300025912	Corn Rhizosphere	MTDIGRSRRLWRRGFFILLGVSVAVIGILLLSRSDRKVSYARESDDAAGQSLEIVARVLVAQQPPANRSTVLKSLRHDNPRARILATDSTVSIGSLTFYFAKNGRLERVSSGK
Ga0207700_100028341	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SFFILFGASVVVIGSLLIGRSDKKVSYALESQDRAQQSVEVLTRLLEEQQPPATRSTILKSLRHDNPKAKILATDTTVSLGSLTFYFAKSGRLERVASSR
Ga0207700_101166512	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIGRSRRIWRRSFFTLLGVSVVVVGSLLIARSDRKVSYAREGPDAAQQNLEMVAHILEQQQPPANRSTVLRVLRRDNPKGRIFATDTSVTMGNLTFMFAKTGKLERVVTR
Ga0208141_10141272	3300025988	Rice Paddy Soil	MTDIGRSRRIWRRSFFILLGVSLAVIAIMLIVRTDRKVSYAGESDDRARENMEIVTRLLEEQQPPTNRSNVLRILRRQNPTAKIFATDTTVMIGDLTFFFAKNGRLERVQEAARR
Ga0208650_10589621	3300026036	Rice Paddy Soil	LGVSLAVIAIMLIVRTDRKVSYAGESDDRARENMEIVTRLLEEQQPPTNRSNVLRILRRQNPTAKIFATDTTVMIGDLTFFFAKNGRLERVQEAARR
Ga0207702_101820282	3300026078	Corn Rhizosphere	MTDIGRSRRLWRRGFFALLGVSVVVIGILLIARSDRKVSYARESDDAAGQSLEIVTRVLLAQQPPATRSSVLKSLRHDNPRARILATDSTVSIANLTFYFAKNGRLERVTPNK
Ga0209027_10364121	3300026300	Grasslands Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVLSR
Ga0209265_12337171	3300026308	Soil	MTDIGRSRRIWRRSFFILLGLSIVVIGFLLIVRPDKKVSYAGESRDTVEQSLEIVARVLEQQQPPAMRSNVLKILRHENPRARILASDSTVSIGTLTFYFAKNGRLERVASGK
Ga0209239_11484901	3300026310	Grasslands Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQEQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVLSR
Ga0209686_12320091	3300026315	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVL
Ga0209152_100268312	3300026325	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQDQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARSGKLERVLSR
Ga0209267_12173311	3300026331	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGILLIVRPDKKVSYAGESHDTAEQNLEIVARVLQEQQPPAMRSGVLKVLRRDNPKARILATDTTVSIGNLTFLFARNGKLERVMAR
Ga0209058_10936332	3300026536	Soil	QFAMTDIGRSRRQWRQAFFILLGVAVVVVGGLMIAVADKKVSYAGERESHDEAQQDLAVVARLLEEQQPPASRSSVLRILRRDNPKARIFATDTTVSIGGLTFVFSRAGRLEQVLHHSP
Ga0209157_11291162	3300026537	Soil	MTDIGRSRRQWRQAFFILLGVAVVVVGGLMIAVADKKVSYAGERESHDEAQQDLAVVARLLEEQQPPASRSSVLRILRRDNPKARIFATDTTVSIGGLTFVFSRAGRLEQVLHHSP
Ga0209156_100222312	3300026547	Soil	MTDIGRSRRIWRRSFFILLGVSVAVIGMLLIVRPDKKVSYAGESHDTAEQSLEIVARVLEQQQPPATRANVLKLLRHDKPKARIMATDTTVSIGNLTFHFAKNGRLGHVAVR
Ga0209178_11789922	3300027725	Agricultural Soil	MTDIGRSRRIWRRSFFILLGVSVVVVGILLIARTDKKVSYAREGPNGVEQNLEIIARLLEEQQPPATRAGVLRVLRHDNPKAKIFATDSTVSIGNLTFVFAKSGKLERVQAR
Ga0209073_103392661	3300027765	Agricultural Soil	FILLGVSVVVVGILLIARTDKKVSYAREGPNGVEQNLEIIARLLEEQQPPATRAGVLRVLRHDNPKAKIFATDSTVSIGNLTFVFAKSGKLERVQAR
Ga0209073_105018722	3300027765	Agricultural Soil	MTDIGRSRRIWRRSFFTLLGVSVVVVGTLLIARSDRKVSYAREGPDAAQQNLDLVAHILEQQQPPANRATVLRVLRHDNPKARILATDTTVTMGSLTFVFAKNGKLERVSTR
Ga0307277_101614021	3300028881	Soil	MTDIGRSRRAWRQAFFILLGVAVVVVGGLMIAVADKKVSYAGERESHDEAQQDLTVVARLLEEQQPPASRSTVLRILRRDNPKARIFATDTTVTIGGLTFVFSRAGRLEQVMHHSP
Ga0268241_100481322	3300030511	Soil	MTDIGRSRRLWRRGFFVLLGVSVVVIGILMIARSDRKVSYARESDDAAGQSLEIVARVLVAQQPPATRSSVLKSLRHDNPHARILATDSTVSIGNLVFYFAKSGRLERVAPTK
Ga0308175_1001489922	3300031938	Soil	MTDIGRSRRLWRRGFFVLLGVSVVVIGILLIARSNGKVSYARESDDAAGQNLEIVARVLVAQQPPATRSSVLKSLRHDNPRARILATDSTVSIGNLVFSFAKSGRLERVAPVK
Ga0307470_112228582	3300032174	Hardwood Forest Soil	MTDIGRSRRIWRRSFFALLGVSVFVIGSLLIARTDKKVSYAREGPNGAEQSLEVVSRLLEEQQPSATRATVLKVLRHDNPKARILATDTTVTIGNLTFVFAKTGKLERVMTR
Ga0372943_0010676_269_610	3300034268	Soil	MTDIGRSRRIWRRSFFILLGLSVVVIGFLLIVRPDKKVSYAGESRDTVEQSLEIVARVLEQQQPPAMRSNVLKILRHENPRARILASDSTVSIGTLTFYFAKNGRLERVASGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences