Metagenome Family F086085

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086085
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	85 residues
Representative Sequence	MTVSRRRLFQSLALTAGYGTAAEGAEPAITLDVLRNVSAAHGTNLSDDRLRVVKPVLEHRLSQLRALRDFEVDDTVAPTQGILDK
Number of Associated Samples	94
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.58 %
% of genes near scaffold ends (potentially truncated)	22.52 %
% of genes from short scaffolds (< 2000 bps)	90.09 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.243 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.36% β-sheet: 0.00% Coil/Unstructured: 56.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01425	Amidase	55.86
PF03781	FGE-sulfatase	2.70
PF00535	Glycos_transf_2	1.80
PF16277	DUF4926	1.80
PF14559	TPR_19	1.80
PF02826	2-Hacid_dh_C	1.80
PF00015	MCPsignal	0.90
PF00216	Bac_DNA_binding	0.90
PF13378	MR_MLE_C	0.90
PF08241	Methyltransf_11	0.90
PF04909	Amidohydro_2	0.90
PF07171	MlrC_C	0.90
PF00144	Beta-lactamase	0.90
PF13620	CarboxypepD_reg	0.90
PF13354	Beta-lactamase2	0.90
PF07992	Pyr_redox_2	0.90
PF03050	DDE_Tnp_IS66	0.90
PF13610	DDE_Tnp_IS240	0.90
PF02852	Pyr_redox_dim	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	55.86
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	2.70
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.80
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.90
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.90
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.90
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.90
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.90

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.39 %
Unclassified	root	N/A	12.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.39 %
Unclassified	root	N/A	12.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.39 %
Unclassified	root	N/A	12.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.94 %
Unclassified	root	N/A	12.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.93 %
Unclassified	root	N/A	12.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.41 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.90 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.93 %
Unclassified	root	N/A	12.61 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.50 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.90 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.93 %
Unclassified	root	N/A	12.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.70 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.80 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.90 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.90 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.93 %
Unclassified	root	N/A	12.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.70 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.80 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.90 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.93 %
Unclassified	root	N/A	12.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.70 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.90 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.90 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.93 %
Unclassified	root	N/A	12.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.70 %
Planctomycetaceae bacterium SCGC AG-212-F19	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	0.90 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.90 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101768577	Not Available	764	Open in IMG/M
3300004092\|Ga0062389_100758181	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300004152\|Ga0062386_101529360	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005172\|Ga0066683_10899958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300005332\|Ga0066388_103838475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300005332\|Ga0066388_105626696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300005336\|Ga0070680_100485333	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300005343\|Ga0070687_100252572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1096	Open in IMG/M
3300005436\|Ga0070713_101363778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005440\|Ga0070705_101621297	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300005518\|Ga0070699_101997399	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005534\|Ga0070735_10515984	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005535\|Ga0070684_101515100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	632	Open in IMG/M
3300005536\|Ga0070697_102033557	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005538\|Ga0070731_11171960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	507	Open in IMG/M
3300005554\|Ga0066661_10665401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	613	Open in IMG/M
3300005558\|Ga0066698_10458290	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005610\|Ga0070763_10933453	Not Available	517	Open in IMG/M
3300006173\|Ga0070716_100675132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	786	Open in IMG/M
3300006796\|Ga0066665_11665193	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300006797\|Ga0066659_11281331	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006854\|Ga0075425_101882051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300009012\|Ga0066710_101375196	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300009012\|Ga0066710_102021306	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300009088\|Ga0099830_10761357	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300009100\|Ga0075418_13184042	Not Available	500	Open in IMG/M
3300009137\|Ga0066709_101661966	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300009137\|Ga0066709_103245552	Not Available	592	Open in IMG/M
3300009177\|Ga0105248_11136769	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	883	Open in IMG/M
3300009524\|Ga0116225_1045552	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300009524\|Ga0116225_1385847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300009700\|Ga0116217_10326893	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300009824\|Ga0116219_10563277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	627	Open in IMG/M
3300009839\|Ga0116223_10244021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300010046\|Ga0126384_12507786	Not Available	501	Open in IMG/M
3300010376\|Ga0126381_102665395	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010379\|Ga0136449_100444180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2278	Open in IMG/M
3300010379\|Ga0136449_100454203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2246	Open in IMG/M
3300010379\|Ga0136449_101036040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300010379\|Ga0136449_101162564	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300010391\|Ga0136847_13029695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2891	Open in IMG/M
3300011269\|Ga0137392_10913047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300012199\|Ga0137383_10297781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300012205\|Ga0137362_10278513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300012206\|Ga0137380_10219564	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300012208\|Ga0137376_11183154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300012210\|Ga0137378_11623554	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012211\|Ga0137377_11094034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300012285\|Ga0137370_11024542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	508	Open in IMG/M
3300012361\|Ga0137360_11599295	Not Available	557	Open in IMG/M
3300012363\|Ga0137390_11299430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300012582\|Ga0137358_10636367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300012923\|Ga0137359_10598338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300012924\|Ga0137413_10782556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300012930\|Ga0137407_11494585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300012944\|Ga0137410_10937587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	734	Open in IMG/M
3300012948\|Ga0126375_10057881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2105	Open in IMG/M
3300014493\|Ga0182016_10572367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645	Open in IMG/M
3300014501\|Ga0182024_10602788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1375	Open in IMG/M
3300014873\|Ga0180066_1028972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300015242\|Ga0137412_10664867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300015264\|Ga0137403_10962291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300015371\|Ga0132258_12607692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300017926\|Ga0187807_1193401	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300017970\|Ga0187783_10148629	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300018007\|Ga0187805_10233425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300018026\|Ga0187857_10359071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300018068\|Ga0184636_1290073	Not Available	577	Open in IMG/M
3300018076\|Ga0184609_10515542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	543	Open in IMG/M
3300018468\|Ga0066662_10818812	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300019458\|Ga0187892_10087173	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300019487\|Ga0187893_10143097	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300019487\|Ga0187893_10371363	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300021168\|Ga0210406_10100124	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300021170\|Ga0210400_11159826	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300021178\|Ga0210408_10908874	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300021401\|Ga0210393_10745942	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	798	Open in IMG/M
3300021420\|Ga0210394_11309920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300021432\|Ga0210384_11335784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	622	Open in IMG/M
3300025912\|Ga0207707_10447635	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300025913\|Ga0207695_10001654	All Organisms → cellular organisms → Bacteria	35916	Open in IMG/M
3300025941\|Ga0207711_11213231	Not Available	696	Open in IMG/M
3300026319\|Ga0209647_1093043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1456	Open in IMG/M
3300026551\|Ga0209648_10639693	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10014241	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10332095	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300027815\|Ga0209726_10156977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1260	Open in IMG/M
3300027855\|Ga0209693_10604947	Not Available	517	Open in IMG/M
3300027905\|Ga0209415_10390639	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300027986\|Ga0209168_10489328	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10036519	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300031128\|Ga0170823_13375197	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031231\|Ga0170824_101576717	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031231\|Ga0170824_117797358	Not Available	696	Open in IMG/M
3300031576\|Ga0247727_10040803	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5991	Open in IMG/M
3300031576\|Ga0247727_10044375	All Organisms → cellular organisms → Bacteria	5612	Open in IMG/M
3300031576\|Ga0247727_10063489	All Organisms → cellular organisms → Bacteria → Acidobacteria	4285	Open in IMG/M
3300031716\|Ga0310813_11136630	Not Available	717	Open in IMG/M
3300031753\|Ga0307477_10272674	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300031753\|Ga0307477_10703499	Not Available	676	Open in IMG/M
3300032160\|Ga0311301_10558352	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300032160\|Ga0311301_10681036	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300032160\|Ga0311301_11048437	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300032160\|Ga0311301_11160128	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300032770\|Ga0335085_10721432	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300032829\|Ga0335070_10524514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300032892\|Ga0335081_12049853	Not Available	608	Open in IMG/M
3300032893\|Ga0335069_10454557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300032893\|Ga0335069_12784569	Not Available	501	Open in IMG/M
3300032898\|Ga0335072_11274018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300033405\|Ga0326727_10466530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1117	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.59%
Host-Associated	Host-Associated	5.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.88%
Aquatic	Environmental → Aquatic	11.71%
Plants	Host-Associated → Plants	5.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.58%
Freshwater	Environmental → Aquatic → Freshwater	9.01%
Cave	Environmental → Terrestrial → Cave	5.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.50%
Sediment	Environmental → Aquatic → Sediment	2.70%
Peat	Environmental → Terrestrial → Peat	0.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.86%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.11%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	5.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.50%
Lake	Environmental → Aquatic → Freshwater → Lake	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.22%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.70%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	2.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.80%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1017685772	3300000559	Soil	VKDEMTVSRRRLFKALALTAGSXXXXXXXXXXXTLEVLRNVSAAHGTNLSDDRLRVLKLVLESRLPQLRTLRNLEFDDTVAPTQGILDK*
Ga0062389_1007581812	3300004092	Bog Forest Soil	MIVTRRQVFQSLALTAGCGTAAEGADPEISLQALRDVSVADGVNLTDDRLRVLKPILEHRLPQLRALRDFEIDDSVEPTQGILGK*
Ga0062386_1015293602	3300004152	Bog Forest Soil	MKVSRRRLFYSLAATAGCGASADAAEPAISVEVLRDVSAFDGTNLSDERLRAIQPALEHKLPQLRALREFKVDSAVEPTQGILKHG*
Ga0066683_108999581	3300005172	Soil	TKGRRSVTTISRRRLFQSLTLTAGYSAATEGAAPAITLDVLRNVSEAHGTNLSDDRLRVVKPVLEHRLPQLRALRDFEIDDIVAPIQGILDK*
Ga0066388_1038384752	3300005332	Tropical Forest Soil	MFQCLALSAGRSAAAEASDPALSVDALRKVSAAHGSNLSESRLRIIQPVLEHRLPQVRALRDFEIGDTVAPTQGILDK*
Ga0066388_1056266961	3300005332	Tropical Forest Soil	SVMAFSRRRLLTSLALAAGGPAGGEGAEHAISLDLLRNVSAAHGTNLSDDRLRIIQAVLQDRLPQLRSVREFEIDDSVAPTQGILER*
Ga0070680_1004853333	3300005336	Corn Rhizosphere	MTVSRRRLLQSLALTGGTAVAAPESAVTLDVLRNVSAAHGTNLTDDRLRVVKPVLEHNLPQLRELRAFEIDDAIAPTQGILDH*
Ga0070687_1002525722	3300005343	Switchgrass Rhizosphere	MTVTRRRLFQSLALTGTAAAGAEPAIPLDVLRNVSAAHGTNLTDDRLRVVKPVLENRLPQLRSLRDFEVDDTVAPTQGILDK*
Ga0070713_1013637781	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSRRQLVQSLALTGAYGALADAAEPAITLDMLRNVSAAHGTSLSDDRLRVVKPVLENRQRQLQALREFEVDDTVEPTQGILA*
Ga0070705_1016212972	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LQSLALTAGSSTAAEAAEPANALEALRNVSAAHGANLSDDRLRVVQPVLERRGAQLQALRDFEVDDTVEPTQGILDK*
Ga0070699_1019973992	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SLALTAGHSAAAQGAEPVITLDALRNVSAAHGTNLSDDRLRVLKPVLEHRLPQLRALREFEVDDAVAPTQGILG*
Ga0070735_105159842	3300005534	Surface Soil	MTVSRRRLFYSLALTAGGGAAAEGAEPALSLDVLRDVSVFHGTDFNDDRLRVVKPVLEHRLPQVQALRDFPIDSAVEPTQGILKHG*
Ga0070684_1015151002	3300005535	Corn Rhizosphere	MTVSRRRLLQSLALTGGTAVAAPESAVTLDVLRNVSTAHGTNLTDDRLRVVKPVLEHNLPQLRELRAFEIDDAIAPTQGILDH*
Ga0070697_1020335572	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTVSRRRLFQSLALTGGYSAGAEGAEPSITLDVLRHVSAAHGTNLSDDRLRVVKPVLEHRLPQLRALRDFEIDDNVPPTQGILDK*
Ga0070731_111719602	3300005538	Surface Soil	MTVSRRRLIQSLALAGGYSEAAEGAEPALTLDVLRDVSAVHGTNLSDDRLRVIKPALEHLLPQLHALRDFEVDDAVAPTQGILDK*
Ga0066661_106654012	3300005554	Soil	MTVSRRRLFQSLALAGGCGAAAESGITLDALRNVSAAHGINLSDDQLRVVKPVLEHRLPQLRALRDFEIDDTIAPTQGILDK*
Ga0066698_104582902	3300005558	Soil	MTVSRRRLFQSLALTGGYSAGAEGAEPAIALDVLRHVSAAHGTNLSDDRLRIVKPVLEHRLPQLRALRDFEIDDNVPPTQGILDK*
Ga0070763_109334532	3300005610	Soil	MAVSRRRLLKSMALAAGSGTAVEAAEPSSGIDAIRNVSAAHGTNLTDDRLRVVQPVLEQRLSQLQDLRAFEPDDAVEPTQGI*
Ga0070716_1006751321	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSEKLRSGSTVNRRRLLESLALMSAYGSTAEAADPEISLDALRNVSLAHGSNLSDDRLRVVQPVIERRLSQLAAFRNLEIDDAVAPAPG
Ga0066665_116651932	3300006796	Soil	MTVSRRRLFQSLALSGGYSAAAGGAEPAITLDVLRSVSAAHGTHLSDERLQVLRPVLENRLPQLRVLRDFEVDDTVAPTQGILA*
Ga0066659_112813312	3300006797	Soil	MAVSRRQLVQSLALTAGYSAVADAAEPAITLDALRNVSAAHGTSLSDDRLRVVKPVLENRQRQLQALREFEVDETVEPTQGILA*
Ga0075425_1018820511	3300006854	Populus Rhizosphere	ADSASRCSEKRRDRMGNGPQKEGGVMTVSRRRLFQSLALAGGCGAAAEGAESGITLDVLRNVSSAHGTNLSDDRLRVVKPVLEHRLPQLRALRDFEVDDVVAPTQGILRF*
Ga0066710_1013751962	3300009012	Grasslands Soil	MTVSRRRLFQSLALTGGYSAGAEGAEPAIALDVLRHVSAAHGTNLSDDRLRIVKPVLEHRLPQLRALRDFEIDDNVPPTQGILDK
Ga0066710_1020213062	3300009012	Grasslands Soil	MTVSRRRLFQSLALAGGCGAAAESGITLDALRNVSAAHGINLSDDQLRVVKPVLEHRLPQLRALRDFEVDDAVAPTQGILRF
Ga0099830_107613572	3300009088	Vadose Zone Soil	MTVSRRRLFRSLALGGGYSAAAGGAEPAITLDALRNVSAAHGTHLSDERLRVVKPVLEHRLPQLRALRDFEVDDTVAPTQGILA*
Ga0075418_131840421	3300009100	Populus Rhizosphere	MPITRRRLVHSLALAGGYKTTAEGAEPRITVDVLRDMSAVHGTNLSDDRLRVLAPVLKNRLTRIQALRDFEVDDSVTPTPGILG*
Ga0066709_1016619662	3300009137	Grasslands Soil	VTTISRRRLFQSLTLTAGYSAATEGAAPAITLDVLRNVSEAHGTNLSDDRLRVVKPVLEHRLPQLRALRDFEIDDIVAPIQGILDK*
Ga0066709_1032455521	3300009137	Grasslands Soil	MTVSRRRLFQSLALSGGYSAAAGGAEPAITLDVLRSVSAARGTHLSDERLRVLKPVLENRLPQLRALRDFEVDDTVAPTQGILV*
Ga0105248_111367691	3300009177	Switchgrass Rhizosphere	LFQALALTGGYSTKAAGAEPSITLDSLRTVSAAHGANLSDDRLRVVKPVLEQRLSQLRSLRDFEVDDSVAPTQGILA*
Ga0116225_10455523	3300009524	Peatlands Soil	LQSLALTAGGSSAAEGAEPAVTLDVLRNVSAAHGTNLSDDRLRVVKPVLERFLPQLRALRDFEIDDSVAPTQGILNK*
Ga0116225_13858472	3300009524	Peatlands Soil	LAGGYSAAADGAEPAITLDALRNVSAVHGAGLSVDRLRIVMPVLEHRAPQLQALRDFEVDDTVEPTQGILNE*
Ga0116217_103268932	3300009700	Peatlands Soil	LQSLALAGGGSSAVEGAEPAVTLDVLRNVSAAHGTNLSDDRLRVVKPVLERFLPQLRALRDFEIDDSVAPTQGILDK*
Ga0116219_105632772	3300009824	Peatlands Soil	MTVSRRRLLQSLALTAGGSSAAEGAEPAVTLDVLRNVSAAHGTNLSDDRLRVVKPVLERFLPQLRALRDFEIDDSVAPTQGILNK*
Ga0116223_102440212	3300009839	Peatlands Soil	MPVSRRRLLQSLALAAGAGPAVEGAEPGIALDVLRDVSVAHGTNLSDDRLRVVKPVLERFLPQLRALRDFEIDDSVAPTQGILDK*
Ga0126384_125077861	3300010046	Tropical Forest Soil	RRPWLLDETSMWLRMLLALTLGFESTIGESMTISRRQLFQSLALAGGYSAAAAGAEPTITLDALRNVSAAHGTNLSDERLGVIKPVLEHRLPQLRTLREFEVDDTIAPTQGILA*
Ga0126381_1026653951	3300010376	Tropical Forest Soil	MTVSRRRLFRSLAVTGGCSLADGAEPPLALEALRNVSAANGTNLTDERLRVVKPVLENRLPQVRALREFAFDDTVEPPQGILEY*
Ga0136449_1004441803	3300010379	Peatlands Soil	MGVSRRQLVQSLALTAGIGAAADGAEPTVTLNVLRNVSAANGTNLSDVRLRIVAPVLENRLPQLRALRDFEFDDTVEPTQGILDR*
Ga0136449_1004542033	3300010379	Peatlands Soil	LQSLALAAGAGPAVEGAEPGIALDVLRDVSVAHGTNLSDDRLRVVKPVLEHLLPELRAFRDLEIDDTVSPTQGILGY*
Ga0136449_1010360401	3300010379	Peatlands Soil	REGTSVMTVNRRQLLQSLALAGGYSAASDGAEPAITLDALRNVSAVHGAGLSDDRLRIVMPVLEHRAPQLQALRDFEVDDTVEPTQGILNE*
Ga0136449_1011625642	3300010379	Peatlands Soil	MTVNRRQLLQSLALAGGYSAAADGAEPAITLDALRNVSAVHGAGLSEDRLRIAMPVLEHRAPQLRALRDFEVDDTVEPTQGILSE*
Ga0136847_130296951	3300010391	Freshwater Sediment	MTVSRRRLLQSLALTGGYSTVAEGAEPALALEVLRHVSAAHGANLSDDRLRVVQPVLAHRLPQLQALRDFEIDDTVEPAQGILS*
Ga0137392_109130472	3300011269	Vadose Zone Soil	VMIVSRRRLFHVLALTGGYSAAAEGAQPAITLDVLRNVSAAHGTNLSDDRLRVVKPVLEHRLPQVRALRDFEVDDAVAPTQGILG*
Ga0137383_102977812	3300012199	Vadose Zone Soil	MTVSRRRLFESLALIGGCSAGADGAQAAITLEVLRNVSAAHGTNLSDDRLRVVQPVLEHRLPQLQAFRDFEVDDAIAPTQGILG*
Ga0137362_102785132	3300012205	Vadose Zone Soil	MTVSRRRLFESLALIGGCSAGADGAQAAITLEVLRDVSSAHGTNLSDDRLRVVQPVLEHRLPQLQAFRDFEVDDAIAPTQGILG*
Ga0137380_102195641	3300012206	Vadose Zone Soil	MTVSRRRLFQSLALTAGYSTAAEGAEPTITLDVLRNVSAAHGTNLSDDRLRVVKPVLEHRLPQLRALRDFEIDDIVAPTQGILDK*
Ga0137376_111831542	3300012208	Vadose Zone Soil	RERVMTVSRRRLFESLALIGGCSAGADGAQAAITLEVLRDVSSAHGTNLSDDRLRVVQPVLEHRLPQLQAFRDFEVDDAIAPTQGILG*
Ga0137378_116235541	3300012210	Vadose Zone Soil	LYLSDHMPQKKGSAITVSRRRLFRSLALVGGYSAAAEGAEPVITLDALRNVSAAHGTNLSDDRLRVVKPVLEHRLPQLRALRDFEVDDAVAPTQGILRF*
Ga0137377_110940342	3300012211	Vadose Zone Soil	AGGCGAAAEGAEPGIALEALRNVSAAHGTNLSDDRLRVVKPVLEHRLPQLRALRDFEVDDAVAPTQGILRF*
Ga0137370_110245422	3300012285	Vadose Zone Soil	MTVSRRRLFQSLALGSGYSAAAVGAEPAITLDVLRSVSAAHGINLSDERLRVLKPVLEHRLPQLRALRDFEVDDTVAPTQGILA*
Ga0137360_115992952	3300012361	Vadose Zone Soil	MTVSRRRLFQSLALAGGCGAAADGAESGITLDALRNVSAAHGTNLSDERLRVVKPVLEHRLPQLRALRDFEVDDAVAPTQGILRF*
Ga0137390_112994302	3300012363	Vadose Zone Soil	QSLALSGGYSGAAGGAEPAITLDVLRSVSAAHGTNLSDERLRVVKPVLEHRLPQLRALRDFEVDDTVAPTQGILA*
Ga0137358_106363672	3300012582	Vadose Zone Soil	MTVSRRRLFQSLALAGGCGAAAEAAESGITLDVLRNVSAAHGTNLSDDRLRIVKPVLEQRLPQVRALRDFEADDAVAPTQGILD*
Ga0137359_105983381	3300012923	Vadose Zone Soil	LSGAYSGAASGAEPAITLDVLRSVSAAHGTNLSDERLRVVKPVLEHRLPQLRALRDFEVDDTVAPTQGILA*
Ga0137413_107825562	3300012924	Vadose Zone Soil	MTVNRRRLFQSLALTAGFRTQVEGAETTITLDVLRNVSAVHGTNLSEDRLRVLKPVLEHSLPQLRAFRDFEVDDAIAPTQGILR*
Ga0137407_114945852	3300012930	Vadose Zone Soil	MIVSRRRLFQSLALSGGYSAAARGAEPAIALDVLRSVSMAHGTNLSDERLRVVKPVLEQRLPQLRALRDFEVDDTIAPTQGILA*
Ga0137410_109375872	3300012944	Vadose Zone Soil	MTVSRRRLFQSLALSGAYSGAASGAEPAITMDVLRSVSAAHGTNLSDERLRVVKPVLEHRLPQLRALRDFEVDDTVAPTQGILA*
Ga0126375_100578812	3300012948	Tropical Forest Soil	MLLALTLGFESTIGESMTISRRQLFESLALAGGYSAAAAGAEPTITLDALRNVSAAHGTNLSDERLGVIKPVLEHRLPQLRTLREFEVDDTIAPTQGILA*
Ga0182016_105723672	3300014493	Bog	MSISRRRFIPSLALTVGCTRTAEAAAPAINLDALRNVSTAHGTNLSDDRLRVVKPVLEQRLPQLRSLRDFDVDDSVAPTQGILDK*
Ga0182024_106027882	3300014501	Permafrost	MPEFKTSVRNGLYVRNPMTVSRRRLFQSLALAGVYGPQAEGADPAITVDVLRDVSAVHGTNLSDDRLGVIKPALEHSLPQLRVLRDFEVDATVEPTQGILDK*
Ga0180066_10289721	3300014873	Soil	LQSLALTGGYSTAAEGAEPVIALEVLRNVSAAHGTNLSDDRLRVVQPVLERRLPQLRALRDFEVDDTVAPTQGILS*
Ga0137412_106648672	3300015242	Vadose Zone Soil	MTVNRRRLFQSLALTAGFRTQVEGAETTITLDVLRNVSAVHGTNLSDDRLRVLKPVLEHSLPQLRAFRDFEVDDAIAPTQGILR*
Ga0137403_109622912	3300015264	Vadose Zone Soil	TGTGMPQKKGSASTVSRRRLFQSLALAGGYSAAAEGAEPVITLDALRNVSAAHGINLSDDRLRVVKPVLENRLPQLRALRDFEVDDTVAPVQGILDK*
Ga0132258_126076922	3300015371	Arabidopsis Rhizosphere	MNRQQKKGNVMALSRRRLFQSLALTAGYGAGAEGAEPATPVDVLRNVSAAHGTNFSDDRLRVIQPVLENRLPQLRTVRDFELEDSVAPTPGILYK*
Ga0187807_11934012	3300017926	Freshwater Sediment	MIVSRRRLFQSLAVAGGCRVAEGTEPPLALEALRNVSAAHGTNLTDDRLRVVKPVLENRLPQVRALREFAFDETVEPPQGILEY
Ga0187783_101486292	3300017970	Tropical Peatland	MAFSRRRLFQSLVLTGGCSTASEAAEPAIGLDMLRHVTAAHGTNLSDDRLRLIKAVVEQRLSELHAIRDFEVNDSIAPTAGILDK
Ga0187805_102334251	3300018007	Freshwater Sediment	MTVSRRRLFQSLAVAGGCSVAEGAEPPLALEALRNVSAAHGTNLTDDRLRVVKPVLENRLPQVRALREFAFDETVEPPQGILEY
Ga0187857_103590711	3300018026	Peatland	ANSNRREKERSVMTVNRRQLLQSLALAGGYSAAADGAEPAITLEALRNVSAVHGAGLSDDRLRIVMPVLEHRLPQLRALRDFEVGDTVEPTQGILNE
Ga0184636_12900731	3300018068	Groundwater Sediment	HRALTAGFEWTNVISACPRKGGVMTVSRRRLLQSLALTGGYSTAAEGAEPVIALEVLRNVSAAHGANLSDDRLRVVQPVLERRLPQLRALRDFEVDDTVAPTQGILS
Ga0184609_105155422	3300018076	Groundwater Sediment	MIVNRRRLFQSLALAGGYSAAAAGAEPEITLDVLRNVSVAHGTNLSDDRLRVVKPVLEHRLPQLRSLRDFEVDDTVAPTQGILYR
Ga0066662_108188122	3300018468	Grasslands Soil	MTVSRRRLFQSLALTAGYGTAAEGAEPAITLDVLRNVSAAHGTNLSDDRLRVVKPVLEHRLSQLRALRDFEVDDTVAPTQGILDK
Ga0187892_100871732	3300019458	Bio-Ooze	MTVSRRRLLQSLALTGPYSRAAAEPAEPAIALDALRSVAEAHGTKLSDSRLRVLKPVLERRLGQLQALRDFEIDDSIAPTQGILDK
Ga0187893_101430973	3300019487	Microbial Mat On Rocks	MSVSRRRLFQSLALASGCGAAAEAAESTGALDALRNVSAAHGINLSDDRLRVLKPVLEQRAARLRALRDFELDDAVEPSRGILE
Ga0187893_103713632	3300019487	Microbial Mat On Rocks	MSVSRRRLFQSLALASGCGTAAEAAAESDVALDALRNVSAAHGMNLSDDRLRVLKPVLEQRVARLRALRDFEIDDAVEPSQGIIDK
Ga0210406_101001243	3300021168	Soil	MTVNRRRLFQSLALIGGYGQTTAGAEPAVTLEALRNVSVAHGTSLSDDRLRVVKPVLEHRLPQLQAFRDFEVDDTVEPTQGILDK
Ga0210400_111598262	3300021170	Soil	MTVNRRRLIQSLALIGGYGKTAAGAEPAITLEALRNVSVAHGTNLSDDRLRVVQPVLEHRLPQLQAFRDFEVDDAIAPTQGILG
Ga0210408_109088743	3300021178	Soil	MTVSRRRLFQSLALIGGCSTAAEGAEPAITLEVLRDVSAAHGTNLSDDRLRVVKPVLEHRLPQLQAFRDFEVDDAIAPTQGILG
Ga0210393_107459422	3300021401	Soil	MTVSRRRLFQSLALAAGCSAAAEGAEPAITLDVLRDVSAMHGTNLSDDRLRVVKPVLDHLLPQLQALRDFEVDDAVAPTQGILDK
Ga0210394_113099202	3300021420	Soil	LMTVSRRRLFQSLALAGAYCAKAEGAEPAITLDVLRDVSALHGTNLSDDRLRVLQPVLGHSLPELRTLRDFEFDDAVAPTQGILDK
Ga0210384_113357841	3300021432	Soil	MTVSRRRLFQSLALIGGCSTAAEGAEPSITLEVLRDVSAAHGTNLSDDRLRVVKPVLEHRLPQLQAFRDFEVDDAIAPTQGILG
Ga0207707_104476351	3300025912	Corn Rhizosphere	MTVSRRRLLQSLALTGGTAVAAPESAVTLDVLRNVSAAHGTNLTDDRLRVVKPVLEHNLPQLRELRAFEIDDAIAPT
Ga0207695_1000165416	3300025913	Corn Rhizosphere	MTVSRRRLLQSLALTGGTAVAAPESAVTLDVLRNVSAAHGTNLTDDRLRVVKPVLEHNLPQLRELRAFEIDDAIAPTQGILDH
Ga0207711_112132311	3300025941	Switchgrass Rhizosphere	VITVSRRRLFQALALTGGYSTKAAGAEPSITLDSLRTVSAAHGANLSDDRLRVVKPVLEQRLSQLRSLRDFEVDDSVAPTQGILA
Ga0209647_10930432	3300026319	Grasslands Soil	MTVSRRRLFRSLALGGGYSAAAGGAEPAITLDALRNVSAAHGTNLSDERLRVVKPVLEHRLPQLRALRDFEVDDTVAPTQGILA
Ga0209648_106396931	3300026551	Grasslands Soil	LLRLCCTMTCTITRLTSGIEATIRERVMTVSRRRLFESLALIGGCSAGADGAQAAITLEVLRDVSSAHGTNLSDDRLRVVQPVLEHRLPQLQAFRDFEVDDAIAPTQGILG
(restricted) Ga0233416_100142412	3300027799	Sediment	VTTMNRRRLLHSLALTGAVGKAAEGAEVAIPLEVLRNVSAAHGANLSDERLTAVKPVLEHRLPQLRALRDFAVDDTVEPTQGILEM
(restricted) Ga0233416_103320952	3300027799	Sediment	LFRSLALTGACGTVAEGAEADIGLDVLRSVSAAHGANFSDDRLRVVKPVLEHRLPQLRALRNFEFDDSVAPTQGILDK
Ga0209726_101569772	3300027815	Groundwater	MAVSRRRLLQSVALTSACGVSAEAAESTTALDVLRNVSAAHGTNFTDDRLRILAPVLESRRAQLQALRDFAIDDTVAPVQGILDR
Ga0209693_106049471	3300027855	Soil	MAVSRRRLLKSMALAAGSGTAVEAAEPSSGIDAIRNVSAAHGTNLTDDRLRVVQPVLEQRLSQLQDLRAFEPDDAVEPTQGI
Ga0209415_103906392	3300027905	Peatlands Soil	MTVSRRRLLQSLALAGGGSSAVEGAEPAVTLDVLRNVSAAHGTNLSDDRLRVVKPVLERFLPQLRALRDFEIDDSVAPTQGILDK
Ga0209168_104893282	3300027986	Surface Soil	MTVSRRRLFYSLALTAGGGAAAEGAEPALSLDVLRDVSVFHGTDFNDDRLRVVKPVLEHRLPQVQALRDFPIDSAVEPTQGILKHG
(restricted) Ga0233417_100365192	3300028043	Sediment	MGRKRKDSVTAVSRRRLFRSLALTGACGTVAEGAEADIGLDVLRSVSAAHGANFSDDRLRVVKPVLEHRLPQLRALRNFEFDDSVAPTQGILDK
Ga0170823_133751972	3300031128	Forest Soil	MTVNRRRVIQSLALIGGYSKTAAAAEPAITLEALRNVSVAHGTNMSDDRLRVVKPVLEHRLPQLQAFRDFEVDDTVEPTQGILDK
Ga0170824_1015767172	3300031231	Forest Soil	MTVSRRRLFQSLALIGGYSKTAAAAEPAITLEALRNVSVAHGTNMSDDRLRVVKPVLEHRLPQLQAFRDFEVDDTVEPTQGILDK
Ga0170824_1177973582	3300031231	Forest Soil	LQSLALTAGSSAVAEGAAETTITLDALRNASTVHGTNLSDDRLRVLKPVLEHSLPELHALRDFEIDDAVAPTQGILNR
Ga0247727_100408035	3300031576	Biofilm	MTVSRRRLLQSLALTGVGNPAVEGAEPAIALDVLRNVSAAHGANLSDDRLRVASPVLERRLPQLRAFREVEIEDTVTPTQGILDK
Ga0247727_100443753	3300031576	Biofilm	MTVSRRRLLQSLALTGGGGSAAKAQQRTIPLDVLRNVSAAHGTNLSDERLRVVQPVLERRLLQLQALRDFEIDDAVEPTQGLSDGGF
Ga0247727_100634896	3300031576	Biofilm	MTVSRRRLLQSLALTGGGNSAVEGAEPAIALDVLRNVSAAHGTNLSDDRLRVVKPALERRLPPLQAFRDFEIDDTVAPTQGILDK
Ga0310813_111366302	3300031716	Soil	VITVSRRRLFQALALTGGYSTKPAGAEPSITLDSLRNVSAAHGSNLGDDRLRVVKPVLEQRLSQLRALRDFEVDDSVAPTQGILA
Ga0307477_102726742	3300031753	Hardwood Forest Soil	MTVNRRRLFQSLALIGGYGKTAAGAEPVITLDVLRDVSAAHGTNLSDDRLRVVKPVLEHRLPQVRVLRDFEVDDTVEPTQGILDK
Ga0307477_107034992	3300031753	Hardwood Forest Soil	MTTVSRRRLFQSLALIGGCGAAAEGAEPAITLSVLRDVSAAHGTNLSDDRLRVLKPVLEHRLAQLRALRE
Ga0311301_105583522	3300032160	Peatlands Soil	MPVSRRRLLQSLALAAGAGPAVEGAEPGIALDVLRDVSVAHGTNLSDDRLRVVKPVLEHLLPELRAFRDLEIDDTVSPTQGILGY
Ga0311301_106810362	3300032160	Peatlands Soil	MTVSRRRLLQSLALTAGGSSAAEGAEPAVTLDVLRNVSAAHGTNLSDDRLRVVKPVLERFLPQLRALRDFEIDDSVAPTQGILDK
Ga0311301_110484371	3300032160	Peatlands Soil	MTVNRRQLLQSLALAGGYSAAADGAEPAITLDALRNVSAVHGAGLSDDRLRIVMPVLEHRAPQLQALRDFEVDDTVEPTQGILNE
Ga0311301_111601282	3300032160	Peatlands Soil	MTVNRRQLLQSLALAGGYSAAADGTEPAITLDALRNVSAVHGAGLSEDRLRIAMPVLEHRAPQLRALRDFEVDDTVEPTQGILSE
Ga0335085_107214321	3300032770	Soil	MTVSRRRMFQSLAVAGGCSAAEGAEPPSALEALRNVSAAHGTNLTDDRLRIVKPVLENRLPQVRALREFAFDDRVEPPQGILEY
Ga0335070_105245142	3300032829	Soil	MTVSRRRLFQSLAVAGGCSVAEGAESPLALEALRNVSAAHGTNLTDDRLRVVKPVLENRRPQVRALREFAFDDTVEPPQGIFEY
Ga0335081_120498532	3300032892	Soil	MKNVTQVEAVSGEDFMAVSRRQLFWFMALSGGYSAAADAAEPAATLDVLRSVSVAHGSGLSDARLRVIQPVLEHRWPQLRALREFEVKDAVEPSHGVR
Ga0335069_104545571	3300032893	Soil	MTVSRRRLFQSLAVAGGCSVAEGAEPPLALEALRNVSAAHGTNLTDDRLRVVKPVLENRRPQVRALREFAFDDTVEPPQGILEY
Ga0335069_127845692	3300032893	Soil	MTVSRRRLFQSLAVAGGCSVAEGAESPLALEALRNVSAAHGTNLTDDRLRVVKPVLENRRPQVRALREFAFDDTVEPPQGISEY
Ga0335072_112740182	3300032898	Soil	VMTVSRRRMFQSLAVAGGCSAAEGAEPPSALEALRNVSAAHGTNLTDDRLQIVKPVLENRLPQVRTLREFAFDDRVEPPQEILEY
Ga0326727_104665303	3300033405	Peat Soil	MTVSRRKLFGALAFTAGCGPAVEAAESGIPLDVLRNVAWAHGIDLSDDRLRVIKPVLEHRQAQLRALREFEAGDTVAPAQGVLDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters