NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F086081

Metagenome / Metatranscriptome Family F086081

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086081
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 91 residues
Representative Sequence VIEIRPTTPKVPDTAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAIPESRVGR
Number of Associated Samples 91
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 23.15 %
% of genes near scaffold ends (potentially truncated) 65.77 %
% of genes from short scaffolds (< 2000 bps) 81.08 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (67.568 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(36.937 % of family members)
Environment Ontology (ENVO) Unclassified
(36.036 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.252 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 27.97%    Coil/Unstructured: 72.03%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF01252Peptidase_A8 41.44
PF03928HbpS-like 9.91
PF06827zf-FPG_IleRS 6.31
PF09489CbtB 2.70
PF08264Anticodon_1 2.70
PF09527ATPase_gene1 2.70
PF09490CbtA 1.80
PF07690MFS_1 1.80
PF02746MR_MLE_N 0.90
PF11794HpaB_N 0.90
PF018125-FTHF_cyc-lig 0.90
PF06808DctM 0.90
PF00311PEPcase 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0597Lipoprotein signal peptidaseCell wall/membrane/envelope biogenesis [M] 82.88
COG4948L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamilyCell wall/membrane/envelope biogenesis [M] 1.80
COG02125-formyltetrahydrofolate cyclo-ligaseCoenzyme transport and metabolism [H] 0.90
COG2352Phosphoenolpyruvate carboxylaseEnergy production and conversion [C] 0.90


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.57 %
UnclassifiedrootN/A32.43 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004633|Ga0066395_10297407All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300005167|Ga0066672_10666254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria670Open in IMG/M
3300005177|Ga0066690_10417915All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria910Open in IMG/M
3300005187|Ga0066675_10339068All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1097Open in IMG/M
3300005436|Ga0070713_101575702Not Available637Open in IMG/M
3300005560|Ga0066670_10933616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria528Open in IMG/M
3300006028|Ga0070717_11489144All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria614Open in IMG/M
3300006173|Ga0070716_100734280Not Available758Open in IMG/M
3300006176|Ga0070765_100006889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales7661Open in IMG/M
3300006176|Ga0070765_100068722All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium2964Open in IMG/M
3300006806|Ga0079220_10832936Not Available704Open in IMG/M
3300007788|Ga0099795_10446173Not Available595Open in IMG/M
3300009038|Ga0099829_10446342Not Available1072Open in IMG/M
3300009143|Ga0099792_10395353All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300009792|Ga0126374_10434232Not Available928Open in IMG/M
3300010046|Ga0126384_10630185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales942Open in IMG/M
3300010048|Ga0126373_10120690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2451Open in IMG/M
3300010048|Ga0126373_11274939Not Available801Open in IMG/M
3300010048|Ga0126373_12760561All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales548Open in IMG/M
3300010048|Ga0126373_12783575Not Available546Open in IMG/M
3300010162|Ga0131853_10613764All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300010358|Ga0126370_10057203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2512Open in IMG/M
3300010361|Ga0126378_12576502Not Available581Open in IMG/M
3300010366|Ga0126379_10501193All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium1286Open in IMG/M
3300010376|Ga0126381_100028888All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6592Open in IMG/M
3300010376|Ga0126381_100200338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2669Open in IMG/M
3300010376|Ga0126381_100202231All Organisms → cellular organisms → Bacteria → Proteobacteria2657Open in IMG/M
3300010376|Ga0126381_100479607All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1750Open in IMG/M
3300010376|Ga0126381_101358874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1027Open in IMG/M
3300010376|Ga0126381_102657175All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300010398|Ga0126383_10597213All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1175Open in IMG/M
3300010398|Ga0126383_13034767All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300011120|Ga0150983_10680947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1406Open in IMG/M
3300012202|Ga0137363_11805984Not Available504Open in IMG/M
3300012207|Ga0137381_11119908Not Available677Open in IMG/M
3300012361|Ga0137360_11603857Not Available556Open in IMG/M
3300012362|Ga0137361_10068234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3001Open in IMG/M
3300012469|Ga0150984_107249011Not Available619Open in IMG/M
3300012582|Ga0137358_10923302Not Available571Open in IMG/M
3300012927|Ga0137416_11163264Not Available694Open in IMG/M
3300012958|Ga0164299_11584348Not Available515Open in IMG/M
3300012971|Ga0126369_10114498All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2471Open in IMG/M
3300012971|Ga0126369_11009086All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300012971|Ga0126369_12221078All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria636Open in IMG/M
3300016270|Ga0182036_10304135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881214Open in IMG/M
3300018482|Ga0066669_12119840Not Available531Open in IMG/M
3300020581|Ga0210399_10246585All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881488Open in IMG/M
3300020583|Ga0210401_10110043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2586Open in IMG/M
3300021170|Ga0210400_10034359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3929Open in IMG/M
3300021171|Ga0210405_11286204All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria538Open in IMG/M
3300021178|Ga0210408_10672901All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300021180|Ga0210396_10198874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1791Open in IMG/M
3300021374|Ga0213881_10270174All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300021388|Ga0213875_10260524Not Available818Open in IMG/M
3300021405|Ga0210387_11074847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria702Open in IMG/M
3300021405|Ga0210387_11582374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria558Open in IMG/M
3300021406|Ga0210386_10849344All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300021439|Ga0213879_10003297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2961Open in IMG/M
3300021474|Ga0210390_10435427All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881107Open in IMG/M
3300021560|Ga0126371_10789123All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis1096Open in IMG/M
3300022528|Ga0242669_1051646Not Available705Open in IMG/M
3300022726|Ga0242654_10228725All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300025915|Ga0207693_10023474All Organisms → cellular organisms → Bacteria4897Open in IMG/M
3300025928|Ga0207700_10287493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881416Open in IMG/M
3300025939|Ga0207665_10700469All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300026356|Ga0257150_1002706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00882395Open in IMG/M
3300026527|Ga0209059_1056555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1715Open in IMG/M
3300027047|Ga0208730_1019151Not Available769Open in IMG/M
3300027069|Ga0208859_1019188All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300027855|Ga0209693_10304233All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300027874|Ga0209465_10181690All Organisms → cellular organisms → Bacteria → Proteobacteria1048Open in IMG/M
3300027884|Ga0209275_10788591Not Available548Open in IMG/M
3300030937|Ga0138302_1410685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria507Open in IMG/M
3300031231|Ga0170824_117731287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria619Open in IMG/M
3300031421|Ga0308194_10032448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1237Open in IMG/M
3300031544|Ga0318534_10126723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1468Open in IMG/M
3300031544|Ga0318534_10464160All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300031545|Ga0318541_10511056All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300031545|Ga0318541_10804961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria524Open in IMG/M
3300031546|Ga0318538_10482928Not Available671Open in IMG/M
3300031572|Ga0318515_10037443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00882397Open in IMG/M
3300031715|Ga0307476_10676193Not Available765Open in IMG/M
3300031736|Ga0318501_10103373All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1424Open in IMG/M
3300031744|Ga0306918_10554578All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300031753|Ga0307477_10718027Not Available667Open in IMG/M
3300031754|Ga0307475_10025200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4241Open in IMG/M
3300031805|Ga0318497_10445457Not Available725Open in IMG/M
3300031805|Ga0318497_10846521Not Available513Open in IMG/M
3300031819|Ga0318568_10664875Not Available648Open in IMG/M
3300031821|Ga0318567_10848460Not Available517Open in IMG/M
3300031846|Ga0318512_10408056Not Available683Open in IMG/M
3300031880|Ga0318544_10375497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria553Open in IMG/M
3300031880|Ga0318544_10425228Not Available517Open in IMG/M
3300031890|Ga0306925_10754787All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1013Open in IMG/M
3300031890|Ga0306925_11428233All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300031893|Ga0318536_10308767Not Available802Open in IMG/M
3300031896|Ga0318551_10498821All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria698Open in IMG/M
3300031910|Ga0306923_11029909All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300031912|Ga0306921_10166513All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2581Open in IMG/M
3300031945|Ga0310913_10480099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria883Open in IMG/M
3300031946|Ga0310910_11313815All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300032010|Ga0318569_10130452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1149Open in IMG/M
3300032064|Ga0318510_10009137All Organisms → cellular organisms → Bacteria2829Open in IMG/M
3300032064|Ga0318510_10258711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria717Open in IMG/M
3300032068|Ga0318553_10359522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria762Open in IMG/M
3300032091|Ga0318577_10593204Not Available526Open in IMG/M
3300032094|Ga0318540_10516295Not Available577Open in IMG/M
3300032180|Ga0307471_103226911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria578Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil36.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil18.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.60%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.80%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.90%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.90%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.90%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.90%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.90%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010162Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)Host-AssociatedOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021388Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8Host-AssociatedOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300027047Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)EnvironmentalOpen in IMG/M
3300027069Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300030937Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066395_1029740723300004633Tropical Forest SoilMIIVAPVTPHIPDTSSRGAVVATYSATMSDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPDGPGVGPNRTTITKHVTLEAIP*
Ga0066672_1066625413300005167SoilRVIAPPRLPAGPLRPVIEVRPNTPRVRDTAPGGTVVASYSVRMSDYSPFTGTVRFGPPYYDSDGRFALVDNNIIVNPKGPGIGPNKATITDHITLEAVPESRAGR*
Ga0066690_1041791523300005177SoilGPLRPVIDVRPNTPKVPDTAPGGTVVARYSVRMSDNSRFTGTVKFGPPYYDSDGRFALVDNNIIVNPKGPGIGPNKATITDHITLEAIPESRAGR*
Ga0066675_1033906823300005187SoilTPKVPDTAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDSDGRFALVDNNIIVNPKGPGIGPNKATITDHITLEAIPESRAGR*
Ga0070713_10157570213300005436Corn, Switchgrass And Miscanthus RhizosphereMVTPNAPRVRDTAPLGSVVASYSVRMSDGSPFTGTVRFGPPHYDNKGVFALSGNDIVVNPNGPGIGPNKTTITDHITLETV
Ga0066670_1093361623300005560SoilTPKVPDTAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDSDGRFALVDNNIIVNPKGPGIGPNKATITDHITLEAVPESRAGR*
Ga0070717_1148914423300006028Corn, Switchgrass And Miscanthus RhizosphereRPVIEVRPNTPKVPDTAPRGTVVATYSVRMSDNSRFNGTVRFGPPYYDNDRRFALVDGNIIVNPGGPGIGPNKATVTDHITLEAIPESRVGR*
Ga0070716_10073428013300006173Corn, Switchgrass And Miscanthus RhizosphereTGPGGSTRAVRDTRPPHPVIMVTPNAPRVRDTAPLGSVVASYSVRMSDGSPFTGTVRFGPPHYDNKGVFALSGNDIVVNPNGPGIGPNKTTITDHITLETVP*
Ga0070765_10000688963300006176SoilVIEVRPNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNRGTFTDHITLEAIPESRVGR*
Ga0070765_10006872233300006176SoilLRPVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAISESRVGR*
Ga0079220_1083293613300006806Agricultural SoilPAGPLRPVIEVRPNTPKVPDTAPRGTIVATYSVRMSDNSRFTGAIRFGPPYYDNDGRFALVDGNIIVNPDGPGIGPNRATLTDHITLEAIPESRVGR*
Ga0099795_1044617313300007788Vadose Zone SoilVIEVRPNTPKVPDTARGGTVVASYSVRMSDNSRFTGSVRFGPPYYDNDGRFALVDGNIIVNPGGPGIGPNKATVTDHITLEAIPESRVGR*
Ga0099829_1044634213300009038Vadose Zone SoilITVTPNTPEVPDTTPLGAIVATYSVAMSDGSPFTGNVRFGAPFYDSGGIFALSGNNIIVNPGGPGVGPNISTVTDHITLEAIP*
Ga0099792_1039535313300009143Vadose Zone SoilAGPLRPVIEVRPNTPKVPDTARGGTVVASYSVRMSDNSRFTGSVRFGPPYYDNDGRFALADGNIIVNPGGPGIGPNKATVTDHITLETIPESRVGR*
Ga0126374_1043423213300009792Tropical Forest SoilPHVPSVPDTTPRGTVVATYSVKMSDNSPFAGTVRFGPPYFDYNGRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQPAR*
Ga0126384_1063018513300010046Tropical Forest SoilPMIVVAPVTPHMPDTSSRGAVVATYSVTMSDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPDGPGVGPNRTTITKHVSLEAIP*
Ga0126373_1012069033300010048Tropical Forest SoilVPDTTPRGTVVATYSVKMSDNSPFAGTVRFGPPYFDYNGRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQPAR*
Ga0126373_1127493913300010048Tropical Forest SoilVISFALITPQVPDTTLRGAVVGTYSVKMSDGSPFTGTVRFGAPYYDAGGVFALSGNKIIVNPNGPGLGRNKTTVIKQITLEAIP*
Ga0126373_1276056113300010048Tropical Forest SoilVITVAPNVPSVPDTTPRGAVVATYSVKMSDNSPFTGTVRFGPPYYDYDGRFALRGNSMIVNPNGPGLGPNEKTITEHVTLEAIPESQAAR*
Ga0126373_1278357513300010048Tropical Forest SoilMVAPVTPHVPDTTPRGATVATYSVMMSNGSAFTGTVRFGPPYYDANGVFALSGNNKIIVNPGGPGLGPNRTTMTDHITLEAIP*
Ga0131853_1061376413300010162Termite GutMVAPVIPHVPDTTLRGATVATYSVMMSDGSPFTGTVRFGPPYYDGNGVFALSGNKIIVNPGGPGLGPNRTTMTDHITLEAIP*
Ga0126370_1005720333300010358Tropical Forest SoilVITVVPHVPSVPDTTPRGTVVATYSVKMSDNSPFTGTVRFGPPYFDYNGRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQPVR*
Ga0126378_1257650213300010361Tropical Forest SoilMIVVAPVTPHMPDTSSRGAVVATYSVTMSDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPDGPGVGPNGTTVTKHLTLEAFP*
Ga0126379_1050119313300010366Tropical Forest SoilVITVVPHVPSVPDTTPRGTVVATYSVKMSDNSPFTGTVRFGPPYFDYNGRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQPAR*
Ga0126381_10002888823300010376Tropical Forest SoilVITVAPNVPSVPDTTPRGAVVATYSVKMSDNSPFTGTVRFGPPYYDYDGRFALRGNSIIVNPNGPGLGPNEKTITEHVTLEAIPESQAAR*
Ga0126381_10020033853300010376Tropical Forest SoilVITVVPHVPSVPDTTPRGTVVATYSVKMSDNSPFTGTVRFGPPYFDYNGRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQHAR*
Ga0126381_10020223153300010376Tropical Forest SoilMVLPTGPQPVITVTPNVPIVPDTTPRGTVVATYSVKMSDNSPFAGTVRFGPPYYDNKGKFALRDNSIIVNPNGPGMGPNKRTIIEHVTLEAIPESQLTR*
Ga0126381_10047960733300010376Tropical Forest SoilVPDTTPRGAVVATYSIKMSDNSPFAGTVRFGPPYYDYNGRFALRDNSIIVNPNGPGLDPNKKTITEHLTLEAIPESQAAR*
Ga0126381_10135887433300010376Tropical Forest SoilPTARVRTSPGPAQPVIVVAPVTPHIPDTSPRGAVVATYSVRTSDGSPFTGTVRFGAPYYDGGGAFALSDNKIIVNPDGPGVGPNGTTVTKHLTLEAFP*
Ga0126381_10265717513300010376Tropical Forest SoilMIIVAPVTPHIPDTSSRGAVVATYLVTMSDGSPFTGTVRFGAPYYDAGGVFALSDNKIIVNPEGPGVGPNRTTITKHVTLEAIP*
Ga0126383_1059721313300010398Tropical Forest SoilQPVITVAPNVPSVPDTTPRGAVVATYSVKMRDNSPFTGTVRFGPPYYDYNGRFALRGNSIIVNPPNEKTITEHVTLEAIPESQAAR*
Ga0126383_1303476713300010398Tropical Forest SoilPIITVTPVTPRVPDTTARGAVVATYSITMSDGSPFRGSVKFGPPNYDGNKMFALSGNKVIVNPNGPGLRRGKTTVTHHITLETVP*
Ga0150983_1068094733300011120Forest SoilVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFTLTDNAIIVNPNGPGIGPNRTTITDHITLEAIPRGDPGKPRGALISPPSQ*
Ga0137363_1180598413300012202Vadose Zone SoilMVTPNTPEVPDTTPLGGVVATYTVAMSDGSPFTGSVRFGAPFYDAGGIFALSGNKIIVNPAGPGVGPNITTITDHITLEAIP*
Ga0137381_1111990813300012207Vadose Zone SoilTVRPNTPRVPDTMPRGAVVATYSGRRSDGSPFTGTVGFGAPHYDNKGVFALAGNHIIVNPDGPGLGPNKTTITDHITLEAIPESRNPVR*
Ga0137360_1160385713300012361Vadose Zone SoilPPQPVITVRPNTPRVPDTMPGGAVVATYSVRMSDGSPFTGTVGFGAPHYDNKGVFALAGNHIIVNPDGPGLGPNKTTITDHITLEAIPESRNPVR*
Ga0137361_1006823433300012362Vadose Zone SoilPNTPRVPDTMPGGAVVATYSVRMSDGSPFTGTVGFGAPHYDNKGVFALAGNHIIVNPDGPGLGPNKTTITDHITLEAIPESRNPVR*
Ga0150984_10724901113300012469Avena Fatua RhizosphereVIEVRPNTPKVPDTAPRGTIVANYSVRMSDNSRFTGTVRFGPPYYDNDGRFALVDGNIIVNPDGPGIGPNKATVTDHITLEAIPESRVGR*
Ga0137358_1092330213300012582Vadose Zone SoilVIEVRPNTPKVPDTARGGTVVASYSVRMSDNSRFTGTVRFGPPYYDNDGRFALADGNIIVNPGGPGIGPNKAPVTDHITLEAIPE
Ga0137416_1116326413300012927Vadose Zone SoilVIEIRPTTPKVPDTAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAIPESRVGR*
Ga0164299_1158434813300012958SoilPPQPVIMVTPNAPRVRDTAPLGSVVASYSVRMSDGSPFTGTVRFGPPHYDNKGVFALSGNDIVVNPNGPGIGPNRTTITDHITLEAIPESRVGR*
Ga0126369_1011449833300012971Tropical Forest SoilVITVVPHVPSVPDTTPRGTVVATYSVKMSDNSPFTGTVRFGPPYFDYNGRFALRDDNIIVNPDGPGLGPNKKTITGHVTLEAIPESQLAR*
Ga0126369_1100908613300012971Tropical Forest SoilMIVVAPVTPHMPDTSSRGAVVATYSVTMSDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPDGPGVGPNRTTVTKHVTLEAIP*
Ga0126369_1222107823300012971Tropical Forest SoilVIEIQPGKPRVPDTALGGTVVASYSIRMSDNSPFTGTVRFGPPYYDDNGKFALDGTRIIVSRDGPGIGPNKTTVTNRITLEAVPENRVGR*
Ga0182036_1030413513300016270SoilPSGGSAPPPLRVAGAPRLQAGALRPVIEVRPDPPRVRDTAAGGTVVARYSVRMSDNSPFNGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0066669_1211984013300018482Grasslands SoilAGPLRPVVEVRPNPPKVPDTAPGGTVVASYSVRMSDNSPFTGTVRFGPPYYDHDGRFALRDNHIIVNPNGPGIGPNKATIVDHITLEAIPESRAGR
Ga0210403_1050739113300020580SoilPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAISESRVGR
Ga0210399_1024658513300020581SoilIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFTLTDNAIIVNPNGPGIGPNRTTITDHITLEAIPDSRVGR
Ga0210401_1011004323300020583SoilVIEVRPNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFVLRDSNIIINPSGPGIGPNRGTITDHITLEAIPESRVGR
Ga0210400_1003435923300021170SoilVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFTLTDNAIIVNPNGPGIGPNRTTITDHITLEAIPDSRVGR
Ga0210405_1128620423300021171SoilMIEVRPNTPRVRDTAPGGTVVARYSVRMSDNSPFTGTVRFGPPYYDNNGRFALAGSNIIVNPDGAGIGPNKATMTDHITLEAIPGEAIPGSRVGR
Ga0210408_1067290113300021178SoilIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAISESRVGR
Ga0210396_1019887413300021180SoilVIEVRPNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNRGTITDHITLEAIPQSRVGR
Ga0213881_1027017423300021374Exposed RockQPVITVSPNAPSVPDTTRRGAVVASYSVKMSDNSPFAGTVRFGPPYYDSKGKFALRDNKIIVNPNGPGIGPNRATVTDHVTLEAIPENQLAR
Ga0213875_1026052423300021388Plant RootsVITVSPNAPSVPDTTRRGAVVASYSVKMSDNSPFAGTVRFGPPYYDSKGKFALRDNKIIVNPNGPGIGPNRATVTDHVTLEAIPENQLAR
Ga0210387_1107484723300021405SoilRPVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAIPDSRVGR
Ga0210387_1158237423300021405SoilPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAISESRVGR
Ga0210386_1084934423300021406SoilNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNRGTITDHITLEAIPESRVGR
Ga0213879_1000329733300021439Bulk SoilMVAPVVPHVPDTAPRGATVASYSVRMSDGSPFTGTVQFGPPYYDGKGVFALSGNKIIVNPGGPGLGPNRTTITDHITLEATP
Ga0210390_1043542733300021474SoilAPPPVLAGPLRPVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAISESRVGR
Ga0126371_1078912333300021560Tropical Forest SoilPRPVIMVAPVTPHVPDTTPRGATVATYSVMMSNGSAFTGTVRFGPPYYDANGVFALSGNNKIIVNPGGPGLGPNRTTMTDHITLEAIP
Ga0242669_105164613300022528SoilPLSRGGAPPPVRVAAPPRLPAGPLRPVIEVRPNTPRVRDTAPGGTVVARYSVRMSDNSPFTGTVRFGPPYYDNNGRFALTDNAIVVNPNGPGIGPNRTTITDHITLEAIPESRVGR
Ga0242654_1022872523300022726SoilPPVPAGPLRPVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYNNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAIPESRVGR
Ga0207693_1002347453300025915Corn, Switchgrass And Miscanthus RhizosphereVRDSRPPQPVIMVTPNAPRVRDTAPLGSVVASYSVRMSDGSPFTGTVRFGPPHYDNKGVFALSGNDIVVNPNGPGIGPNKTTITDHITLETVP
Ga0207700_1028749333300025928Corn, Switchgrass And Miscanthus RhizosphereAAPPPVPAGPLRPVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFTLTDNAIIVNPNGPGIGPNRTTITDHITLEAIPDSRVGR
Ga0207665_1070046923300025939Corn, Switchgrass And Miscanthus RhizosphereACRRTGPGGSTRAVRDTRPPHPVIMVTPNAPRVRDTAPLGSVVASYSVRMSDGSPFTGTVRFGPPHYDNKGVFALSGNDIVVNPNGPGIGPNKTTITDHITLETVP
Ga0257150_100270633300026356SoilRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAIPESRVGR
Ga0209059_105655533300026527SoilVIEIRPNIPKVPDTAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDSDGRFALVDNNIIVNPKGPGIGPNKATITDHITLEAI
Ga0208730_101915113300027047Forest SoilVIEVRPNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNRGTFTDHITLEAIPESRVGR
Ga0208859_101918823300027069Forest SoilEVRPNTPRVRDTAPGGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNRGTFTDHITLEAIPESRVGR
Ga0209693_1030423323300027855SoilRARDTAPGGTVVARYSVRMSDNSPFTGTVRFGPPHYDDNGKFALAGSNIIVNPDGPGIGPNAATMTDHITLEAIPDSRVGR
Ga0209465_1018169023300027874Tropical Forest SoilVIVVAPVTPHIPDTSSRGAVVATYSVTMSDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPDGPGVGPNRTTITKHVTLEAIP
Ga0209275_1078859113300027884SoilPVSAGPPRPVIEIRPTTPKVPDIAPGGTVVARYSVRMSDNSRFTGTVRFGPPYYDNNGRFALTDNAIIVNPNGPGIGPNRTTITDHITLEAIPESRVGR
Ga0138302_141068523300030937SoilVAAPPRLPAGPLRPVIEVRPNTPRVRDTAPGGTVVARYSVRMSDNSPFTGTVRFGPPHYDDNGKFALAGSNIIVNPDGPGIGPNAATMTDHITLEAIPDSRVGR
Ga0170824_11773128723300031231Forest SoilVIEVRPNTPRVRDTAPGGTVVARYSVRMSDNSPFTGTVKFGPPYYDNNGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGEAIPGSRVGR
Ga0308194_1003244813300031421SoilPKVPDTAPRGTVVATYSVRMSDNSRFTGTVRFGPPYYDNDGRFALVDGNIIVNPDGPGIGPNKATVTDHITLEAIPESRVGR
Ga0318534_1012672313300031544SoilMVAPVAPHIPDTSSRGAVVATYSVTMGDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPHGPGVGPNRTTVTKHITLEAIP
Ga0318534_1046416023300031544SoilIEVRPDTPRVRDTAAGGTVVARYSVRMSDNSPFNGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0318541_1051105623300031545SoilPAQPVIVVAPVTPHIPDTSPRGAVVATYSVRTSDGSPFTGTVRFGAPYYDGGGAFALSDNKIIVNPDGPGVGPNGTTVTKHLTLEAFP
Ga0318541_1080496123300031545SoilLRPVIEVRPNTPRAPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNKGTITDNITLEAIPESRVGR
Ga0318538_1048292813300031546SoilAPAVRGTGPPQPVITVTPNTPKVPDTTPLGAVVATYSVTMSDGSPFHGTVGFGAPYYDGRGVFALAGNHIIVNPSGPGLGPNKTTITDHITLEAIP
Ga0318515_1003744353300031572SoilPNAPKVPDTTPLGAVVATYSVTMSDGSPFRGTVGFGAPYYDGRGVFALSGNHIIVNPSGPGLGPNRTTITDHITLEATP
Ga0307476_1067619313300031715Hardwood Forest SoilVRVTAPPRLPTGPLRPVIEVRPNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNRGTITDHITLEAIPESRVGR
Ga0318501_1010337323300031736SoilVITVVPHVPSVPDTTPRGTVVATYSVKMSDNSPFAGTVRFGPPYFDYNRRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQPAR
Ga0306918_1055457833300031744SoilARVRTSPGPAQPVIVVAPVTPHIPDTSPRGAVVATYSVRTSDGSPFTGTVRFGAPYYDGGGAFALSDNKIIVNPDGPGVGPNGTTVTKHLTLEAFP
Ga0307477_1071802723300031753Hardwood Forest SoilPPLRRSGASPAVRVTAPPRLPTGPLRPVIEVRPNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSGPGIGPNRGTITDHITLEAIPQSRVGR
Ga0307475_1002520023300031754Hardwood Forest SoilVIEVRPNTPRVPDIAPSGTVVARYSVRMSDNSPFTGTVRFGPPFYDNDGRFALRDSNIIINPSGPGIGPNRGTITDHITLEAIPESRVGR
Ga0318546_1057243413300031771SoilRPSAAPAVRATAPPMPPQPVITVVPNTPRVADTTPLGAMVATYSVAMSDGSPFTGAVRFGAPYYDGKGVFALSGNRIIVNPNGSGLGPNRTTITNHFTLETVP
Ga0318497_1044545713300031805SoilPRVRDTAAGGTVVARYSVRMSDNSPFSGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0318497_1084652113300031805SoilTAPAVRGTGPPQPVITVTPNTPKVPDTTPLGAVVATYSVTMSNGSPFHGTVGFGAPYYDGRGVFALAGNHIIVNPSGPGLGPNKTTITDHITLEAIP
Ga0318568_1066487513300031819SoilVTPNTPKVPDTTPLGAVVATYSVTMSNGSPFHGTVGFGAPYYDGRGVFALAGNHIIVNPSGPGLGPNKTTITDHITLEAIP
Ga0318567_1084846023300031821SoilYRAAPTARVRTSPGPAQPVIVVAPVTPHIPDTSPRGAVVATYSVRTSDGSPFTGTVRFGAPYYDGGGAFALSDNKIIVNPDGPGVGPNGTTVTKHLTLEAFP
Ga0318512_1040805623300031846SoilVLPIGPRPVITVVPHVPSVPDTTPRGTVVATYSVKMSDNSPFAGTVRFGPPYFDYNRRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQPAR
Ga0318544_1037549723300031880SoilVAVPPRLQAGPLRPVIEVRPDTPRVRDTAAGGTVVARYSVRMSDNSPFNGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0318544_1042522813300031880SoilGTGPPQPVITVTPNAPKVPDTTPLGAVVATYSVTMSDGSPFRGTVGFGAPYYDGRGVFALSGNHIIVNPSGPGLGPNRTTITDHITLEATP
Ga0306925_1075478713300031890SoilVITVTPNAPKVPDTTPLGAVVATYSVTMSDGSPFRGTVGFGAPYYDGRGVFALSGNHIIVNPSGPGLGPNRTTITDHITLEATP
Ga0306925_1142823323300031890SoilVPDTTPRGAVVATYSVKMSDNSPFTGTMRFGPPYFDYNGRFALRDNNIIVNPSGPGIGPNKKTVTEHVTLEAVPESRLAR
Ga0318536_1030876713300031893SoilPLRPVIEVRPDTPRVRDTAAGGTVVARYSVRMSDNSPFNGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0318551_1049882123300031896SoilMIEVRPNIPRVPDVAPSGTVVARYSVRMSDNSPFNGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0306923_1102990913300031910SoilPRLQAGPLRPVIEVRPDTPRVRDTAAGGTVVARYSVRMSDNSPFTGTVRFGPPYYDNDGRFALRDSNIIINPSSPGIGPNRGTITDNITLEAIPESRVGR
Ga0306921_1016651333300031912SoilVITVVPHVPSVPDTTPRGTVVATYSVKMSDNSPFAGTVRFGPPYFDYNRRFALRDDNIIVNPDGPGLGPNKKTITEHVTLEAIPESQLAR
Ga0310913_1048009923300031945SoilQPVITVTPNTPKVPDTTPLGAVVATYSVTMSDGSPFHGTVGFGAPYYDGRGVFALAGNHIIVNPSGPGLGPNKTTITDHITLEAIP
Ga0310910_1131381523300031946SoilHIPDTSPRGAVVATYSVRTSDGSPFTGTVRFGAPYYDGGGAFALSDNKIIVNPDGPGVGPNGTTVTKHLTLEAFP
Ga0318569_1013045233300032010SoilPLYRAAPTARVRTSPGPAQPVIVVAPVTPHIPDTSPRGAVVATYSVRTSDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPHGPGVGPNRTTVTKHITLEAIP
Ga0318510_1000913743300032064SoilLYRAAPTARVRTSPGPAQPVIVVAPVTPHIPDTSPRGAVVATYSVRTSDGSPFTGTVRFGAPYYDGGGVFALSDNKIIVNPHGPGVGPNRTTVTKHITLEAIP
Ga0318510_1025871113300032064SoilTGPPQPVITVTPNTPKVPDTTPLGAVVATYSVTMSNGSPFHGTVGFGAPYYDGRGVFALAGNHIIVNPSGPGLGPNKTTITDHITLEAIP
Ga0318553_1035952213300032068SoilPPPVRVAVPPRLQAGPLRPVIEVRPDTPRVRDTAAGGTVVARYSVRMSDNSPFNGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0318553_1062487523300032068SoilPGVGRPGTAPAVRGTGPPQPVITVTPNTPKVPDTTPLGAVVATYSVTMSDGSPFHGTVGFGAPYYDGRGVFALAGNHIIVNPSGPGLGPNKTTITDHITLEAIP
Ga0318577_1059320413300032091SoilTAPAVRGTGPPQPVITVTPNTPKVPDTTPLGAVVATYSVTMSDGSPFHGTVGFGAPYYDGRGVFALAGNHIIVNPSGPGLGPNKTTITDHITLEAIP
Ga0318540_1051629513300032094SoilRPDTPRVRDTAAGGTVVARYSVRMSDNSPFNGTVRFGPPYYDNDGRFALAGSNIIVNPDGPGIGPNKATMTDHITLEAIPGSRVER
Ga0307471_10322691123300032180Hardwood Forest SoilVPRPGADKHTMAPAAGEPKPSPPQTEPGGSTRAVRDTRPPQPVIMVTPNAPRVRDTAPLGSVVASYSVRMSDGSPFTGTVRFGPPHYDNKGVFALSGNDIVVNPNGPGIGPNKTTITDHITLETVP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.