Metagenome / Metatranscriptome Family F086046

Overview

Basic Information

• Family ID: F086046
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 111
• Average Sequence Length: 47 residues
• Representative Sequence: MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAI
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 111

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 88.29 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 95.50 %
• Associated GOLD sequencing projects: 93
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (100.000 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.216 % of family members)
• Environment Ontology (ENVO): Unclassified (26.126 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (51.351 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 32.86%
  β-sheet: 0.00%
  Coil/Unstructured: 67.14%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13183	Fer4_8	32.43
PF02910	Succ_DH_flav_C	1.80
PF01725	Ham1p_like	0.90
PF00977	His_biosynth	0.90
PF01797	Y1_Tnp	0.90
PF13237	Fer4_10	0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	0.90
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.90

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	95.50 %
Unclassified	root	N/A	0.00 %

Level 5

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	56.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.33 %
Unclassified	root	N/A	0.00 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	56.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	56.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Level 8

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	49.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Level 9

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	40.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Unclassified	root	N/A	0.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000789|JGI1027J11758_11236416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606
3300000789|JGI1027J11758_12800421	All Organisms → cellular organisms → Bacteria	1113
3300001546|JGI12659J15293_10069690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	778
3300001593|JGI12635J15846_10495631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	722
3300001593|JGI12635J15846_10795643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	542
3300002245|JGIcombinedJ26739_101067527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	694
3300003368|JGI26340J50214_10158265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	566
3300004082|Ga0062384_100049964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2019
3300004082|Ga0062384_100198250	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1182
3300004139|Ga0058897_10916539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600
3300005367|Ga0070667_101503857	All Organisms → cellular organisms → Bacteria → Acidobacteria	632
3300005434|Ga0070709_10390407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1037
3300005434|Ga0070709_10562189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	874
3300005435|Ga0070714_102379943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	515
3300005437|Ga0070710_11038712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599
3300005537|Ga0070730_10507606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	774
3300005712|Ga0070764_10144549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1304
3300005993|Ga0080027_10032130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1875
3300006028|Ga0070717_10092097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2560
3300006173|Ga0070716_101759930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512
3300006175|Ga0070712_101010278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720
3300006804|Ga0079221_11524979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538
3300006893|Ga0073928_10189139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1622
3300009092|Ga0105250_10199394	All Organisms → cellular organisms → Bacteria → Acidobacteria	844
3300009623|Ga0116133_1133950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643
3300011120|Ga0150983_13508062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2104
3300012096|Ga0137389_11682053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	531
3300012918|Ga0137396_10782559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	702
3300012918|Ga0137396_10998661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606
3300015197|Ga0167638_1083784	All Organisms → cellular organisms → Bacteria → Acidobacteria	635
3300015372|Ga0132256_100966733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	967
3300017943|Ga0187819_10182453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242
3300017975|Ga0187782_10976669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	658
3300017995|Ga0187816_10146448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1022
3300018019|Ga0187874_10100363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1262
3300018030|Ga0187869_10302736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	769
3300018468|Ga0066662_10273166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1399
3300019275|Ga0187798_1135084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	806
3300021088|Ga0210404_10359845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809
3300021170|Ga0210400_10143292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1921
3300021344|Ga0193719_10245916	All Organisms → cellular organisms → Bacteria → Acidobacteria	757
3300021404|Ga0210389_10876389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	699
3300021404|Ga0210389_11050846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630
3300021404|Ga0210389_11207902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582
3300021406|Ga0210386_10842860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787
3300021432|Ga0210384_10420389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1204
3300021433|Ga0210391_10464645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993
3300021474|Ga0210390_10389763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1178
3300021474|Ga0210390_10773199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797
3300022709|Ga0222756_1085408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	521
3300022712|Ga0242653_1032345	All Organisms → cellular organisms → Bacteria	789
3300022716|Ga0242673_1107864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546
3300022724|Ga0242665_10009103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1965
3300023030|Ga0224561_1024338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535
3300023255|Ga0224547_1024745	All Organisms → cellular organisms → Bacteria	770
3300024049|Ga0233359_1032262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	604
3300025414|Ga0208935_1058044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	519
3300025463|Ga0208193_1060382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	804
3300025906|Ga0207699_10441538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	932
3300025911|Ga0207654_10803203	All Organisms → cellular organisms → Bacteria → Acidobacteria	679
3300025929|Ga0207664_11725511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548
3300025986|Ga0207658_11627033	All Organisms → cellular organisms → Bacteria → Acidobacteria	590
3300026217|Ga0209871_1013411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1526
3300026217|Ga0209871_1037999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907
3300026281|Ga0209863_10082144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	950
3300026557|Ga0179587_10424398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	868
3300026890|Ga0207781_1016703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	753
3300027370|Ga0209010_1050623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707
3300027548|Ga0209523_1065054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750
3300027610|Ga0209528_1028076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244
3300027663|Ga0208990_1067447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1038
3300027667|Ga0209009_1074963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852
3300027738|Ga0208989_10122059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	883
3300027825|Ga0209039_10329771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596
3300027853|Ga0209274_10091122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1494
3300027867|Ga0209167_10834782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501
3300027875|Ga0209283_10475751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	806
3300027895|Ga0209624_11130474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503
3300027898|Ga0209067_10254237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956
3300027986|Ga0209168_10103296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1470
3300028036|Ga0265355_1000752	All Organisms → cellular organisms → Bacteria	1864
3300028780|Ga0302225_10250261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846
3300028800|Ga0265338_10434327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	931
3300028906|Ga0308309_10939250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750
3300029636|Ga0222749_10213128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	970
3300029914|Ga0311359_10798882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	662
3300029944|Ga0311352_10721411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	785
3300030737|Ga0302310_10609093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	576
3300030815|Ga0265746_1036384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	649
3300030937|Ga0138302_1446393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	502
3300030991|Ga0073994_12429809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	842
3300031010|Ga0265771_1028079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525
3300031028|Ga0302180_10550294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	560
3300031236|Ga0302324_100609556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1563
3300031446|Ga0170820_14852101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580
3300031715|Ga0307476_10691645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	755
3300031718|Ga0307474_10175632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1624
3300031788|Ga0302319_10290661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1929
3300031823|Ga0307478_10216374	All Organisms → cellular organisms → Bacteria	1546
3300031823|Ga0307478_10904718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738
3300031823|Ga0307478_11479280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	562
3300031962|Ga0307479_10575232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1109
3300031962|Ga0307479_11142567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	744
3300031962|Ga0307479_11584762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	610
3300032174|Ga0307470_10286372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109
3300032180|Ga0307471_100668442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1202
3300032515|Ga0348332_12882892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533
3300032805|Ga0335078_10193085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2836
3300032828|Ga0335080_10552450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1217
3300033134|Ga0335073_10060955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5000
3300034199|Ga0370514_198751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.69%
Host-Associated	Host-Associated	6.31%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.98%
Aquatic	Environmental → Aquatic	11.71%
Plants	Host-Associated → Plants	6.31%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.87%
Freshwater	Environmental → Aquatic → Freshwater	9.91%
Peat	Environmental → Terrestrial → Peat	7.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Sediment	Environmental → Aquatic → Sediment	0.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.90%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.44%
Loam	Environmental → Terrestrial → Soil → Loam	23.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.90%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.90%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.80%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental
3300015372	Soil combined assembly	Host-Associated
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental
3300024049	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30	Environmental
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental
3300029914	III_Bog_E2 coassembly	Environmental
3300029944	II_Palsa_E1 coassembly	Environmental
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_112364161	3300000789	Soil	MFRPSHESLLLQNAEVDRLNLPRIQDDTELEALKA
JGI1027J11758_128004213	3300000789	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLLEITSGETLRFDPRLDPSRRF
JGI12659J15293_100696901	3300001546	Forest Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQPILAGDSLRFDPRLD
JGI12635J15846_104956312	3300001593	Forest Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKA
JGI12635J15846_107956431	3300001593	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLQEIISGEMLRFDPRLDPS
JGIcombinedJ26739_1010675271	3300002245	Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQALLPIRASESLR
JGI26340J50214_101582651	3300003368	Bog Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDDTELEALKADGNLLPIRSSE
Ga0062384_1000499644	3300004082	Bog Forest Soil	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKAIEALV
Ga0062384_1001982502	3300004082	Bog Forest Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQPIVAGESL
Ga0058897_109165391	3300004139	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLRIEHSLD
Ga0070667_1015038572	3300005367	Switchgrass Rhizosphere	MFRPSRESLLRQNAEIDRAELPRIQDDDELEALKASQVLVPIVASEHVRFDPRLDP
Ga0070709_103904073	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLRIEHS
Ga0070709_105621891	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHDSLLLQNQEIDRLDLPRIADDEELESLKASEALVPILES
Ga0070714_1023799431	3300005435	Agricultural Soil	MFRPSHESLLMQNAEIDRLELPRIQDDDELEALKASGALQPIIAGETLRFDPRLDPSR
Ga0070710_110387122	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLLQNAEVDRLNLPRIQDDTELEALKADGSLVAITPSQ
Ga0070730_105076061	3300005537	Surface Soil	MFRPSHESLLIQNAEINRLELPRIQNETELEALKADGSLL
Ga0070764_101445491	3300005712	Soil	MFRPSHESLILQNAEVDRLNLPRIQDETELEALKADGSLREIVTGESLRIDP
Ga0080027_100321301	3300005993	Prmafrost Soil	MFRPSHESLLLQNAEINRLELPRIQDDDELEQLKLSQDLLPIRTSESLRFDPR
Ga0070717_100920973	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLLQNAEVDRLNLPRIQDETELEALKADGSL
Ga0070716_1017599301	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLLQNAEINRLELPRIQDDNELEMLKAGGALLPIRASET
Ga0070712_1010102781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHESLLIQNAEINRLDLPRIQDDTELEALKADGSLLPIRAGEM
Ga0079221_115249791	3300006804	Agricultural Soil	MFRPSHESLLLQNAEVDRLNLPRIQDDTELEALKADGSLVAITPSQSLRI
Ga0073928_101891392	3300006893	Iron-Sulfur Acid Spring	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGETLRFDPRLDPS
Ga0105250_101993942	3300009092	Switchgrass Rhizosphere	VFRPSRESLLLQNHEIDRMDLPRIQDDAELEQLKASEDLVPILA
Ga0116133_11339502	3300009623	Peatland	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKATEALVPIRTSESLRFDPRLDPTR
Ga0150983_135080623	3300011120	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIVSGEMLRFDPRLDPS
Ga0137389_116820531	3300012096	Vadose Zone Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKASGAL
Ga0137396_107825592	3300012918	Vadose Zone Soil	MFRPSHESLLLQNAEVNRLELPRIQNDDELEALKASG
Ga0137396_109986611	3300012918	Vadose Zone Soil	MFKPSHESLILQNAEIDRLELPRIQDDDELEALKASQA
Ga0167638_10837841	3300015197	Glacier Forefield Soil	VFRPSRESLLLQNHEIDRMDLPRIQDDAELEQLKASEDLVPILAG
Ga0132256_1009667331	3300015372	Arabidopsis Rhizosphere	VFRPSHESLLLQNQEIDRMELPRIQDDAELEQLKASEELVPIVAGPTLR
Ga0187819_101824532	3300017943	Freshwater Sediment	MFRPSHESLLIQNAEIDRLDLPRIQDETELEALKADGSLV
Ga0187782_109766691	3300017975	Tropical Peatland	MFKPTHESLLIQNAEINRLELPRIQDETELEALKADGSLLPIIPSESLRIEPSL
Ga0187816_101464482	3300017995	Freshwater Sediment	MFRPSHESLLIQNAEINRLELPRIQNETELEALKADGSLLEIR
Ga0187874_101003633	3300018019	Peatland	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPRLDPSRRY
Ga0187869_103027362	3300018030	Peatland	MFRPTHESLLAQNAEVDRLELPRIQDDDELEALKAT
Ga0066662_102731661	3300018468	Grasslands Soil	MFRPSHESLLIQNAEINRLVLPRIQNDTELEALKA
Ga0187798_11350841	3300019275	Peatland	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPGETLRIEHSLD
Ga0210404_103598452	3300021088	Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPR
Ga0210400_101432923	3300021170	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGETLRFDP
Ga0193719_102459161	3300021344	Soil	VFRPSRESLLLQNQEIDRMDLPRIQDDAELEQLKASEDLV
Ga0210389_108763891	3300021404	Soil	MFRPSHESLLLQNEEIDRLDLPRIQDDDELDALKAS
Ga0210389_110508461	3300021404	Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIISGEMLRFDPR
Ga0210389_112079021	3300021404	Soil	MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAI
Ga0210386_108428601	3300021406	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGS
Ga0210384_104203892	3300021432	Soil	MFRPSHESLLLQNEEINRLELPRIQDDDELAALIESQALLPIRTGTTLRI
Ga0210391_104646452	3300021433	Soil	MFRPSHESLLLQNAEVDRLELHRILDDDELEALKASGELQPIIQGETLR
Ga0210390_103897632	3300021474	Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQP
Ga0210390_107731992	3300021474	Soil	MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAIVPNE
Ga0222756_10854081	3300022709	Soil	MFRPSHESLLIQNAEINRLELPRIQDETELEALKADGSLLEIRSGETL
Ga0242653_10323452	3300022712	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLR
Ga0242673_11078641	3300022716	Soil	MFRPSHESLLLQNAEIDRLELPRIQDDTELEALKADGSLLAIVPNESLKIE
Ga0242665_100091031	3300022724	Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVPIIPSETLRI
Ga0224561_10243381	3300023030	Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQPI
Ga0224547_10247452	3300023255	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKANGALQEIMASE
Ga0233359_10322621	3300024049	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKFSGALLPIIAGETLRF
Ga0208935_10580441	3300025414	Peatland	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQEIIAGET
Ga0208193_10603821	3300025463	Peatland	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIAGDTLRFDPRL
Ga0207699_104415381	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPSHDSLLLQNQEIDRLDLPRIADDEELESLKASEALVPILESESLRF
Ga0207654_108032031	3300025911	Corn Rhizosphere	MFRPSHDSLLLQNQEIDRLDLPRIADDEELESLKASEALVP
Ga0207664_117255113	3300025929	Agricultural Soil	MFRPSHESLILQNAEVNRLDLPRIQDETELEALKADGSLLPIVPGEALRIEPSLDPSRRY
Ga0207658_116270331	3300025986	Switchgrass Rhizosphere	MFRPSRESLLRQNAEIDRAELPRIQDDDELEALKASQVLVPIVASEH
Ga0209871_10134113	3300026217	Permafrost Soil	MFRPSHESLLIQNAEIDRLDLPRIQNDTELEALKGDGSLLEIRAGETLRFDPRLDPSRRY
Ga0209871_10379991	3300026217	Permafrost Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKAD
Ga0209863_100821441	3300026281	Prmafrost Soil	MFRPSHESLLLQNAEINRLELPRIQDDDELEQLKLSQDLLPIRTSESLRFDP
Ga0179587_104243981	3300026557	Vadose Zone Soil	MFRPSHESLLLQNAEINRLELPRIQDDNELEMLKAGGALLPIRAS
Ga0207781_10167031	3300026890	Tropical Forest Soil	MFRPSHESLLIQNAEINRLELPRIQDETELEALKADGSLVPIIPSDSLRIE
Ga0209010_10506231	3300027370	Forest Soil	LIQNAEIDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPRLDP
Ga0209523_10650541	3300027548	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLVAIVPSET
Ga0209528_10280762	3300027610	Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQ
Ga0208990_10674472	3300027663	Forest Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKISGALLPIRASDTLRFDPRLDPSR
Ga0209009_10749631	3300027667	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIISGEML
Ga0208989_101220591	3300027738	Forest Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKISGALLPIRASDTLRFD
Ga0209039_103297712	3300027825	Bog Forest Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQEIIAGESLRFDPRLDPSRRFCRP
Ga0209274_100911222	3300027853	Soil	MFRPSHESLLLQNAEVDRMELPRIQDDDELEALKASGALQEIVA
Ga0209167_108347821	3300027867	Surface Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQPIIPGETLRFDPRLDPTRRY
Ga0209283_104757511	3300027875	Vadose Zone Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEVLKVSGALLPIRASDTLRFDPRLDP
Ga0209624_111304741	3300027895	Forest Soil	MFRPSHESLLIQNAEIDRLELPRIEDETELEALKADGSLLEIISGEMLRFDP
Ga0209067_102542373	3300027898	Watersheds	MFRPSHESLLIQNAEIDRLDLPRIQDETELEALKADGSLLEIKAG
Ga0209168_101032963	3300027986	Surface Soil	MFRPSHESLLLQNAEVDRLELPRIEDDDELEALKASGA
Ga0265355_10007523	3300028036	Rhizosphere	MFRASHESLLIQNAEIDRLELPRIQDDDELEALKASGALQPIIAGESLRFDPRLDPSRRY
Ga0302225_102502612	3300028780	Palsa	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKAIEALVPIRI
Ga0265338_104343272	3300028800	Rhizosphere	MFRPSHESLLIQNAEINRLDLPRIQNETELEALKADGSLLEIRAGETLRFDP
Ga0308309_109392502	3300028906	Soil	MFRPSHESLLAQNAEVDRLELPRIQDDDELEALKASGALQ
Ga0222749_102131281	3300029636	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGALQEIIAGESLRFDPRLD
Ga0311359_107988821	3300029914	Bog	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKVSGALQP
Ga0311352_107214111	3300029944	Palsa	MFRPSHQSLLVQNAEINRMELPRIQDDAELEHLKATEALVP
Ga0302310_106090931	3300030737	Palsa	MFRPSHESLLLQNAEIDRLELPRIQDDDELEALKASGALQPIIAGETLRFDPRLDPSR
Ga0265746_10363841	3300030815	Soil	MFRPSHESLLIQNAEINRLDLPRIQNDTELEALKGDGSLLPIRAGETLRFDPRLD
Ga0138302_14463931	3300030937	Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKFSGALLPIIAGETLRFDPRLDP
Ga0073994_124298092	3300030991	Soil	MFRPSHESLLLQNAEINRLDLPRIQDDDELEALKI
Ga0265771_10280791	3300031010	Soil	MFRASHESLLIQNAEIDRLELPRIQDDDELEALKASGALQ
Ga0302180_105502941	3300031028	Palsa	MFRPSHESLLLQNAEINRMDLPRIQDDDELEAMKLRGDLLPIIAGETLRFDPRLDPSR
Ga0302324_1006095563	3300031236	Palsa	MFRPSHESLLLQNAEINRMDLPRIQDDDELEAMKLRGDLLPIIAGE
Ga0170820_148521011	3300031446	Forest Soil	MFRPSHESLLIQNAEIDRLDLPRIQNDTELEALKG
Ga0307476_106916452	3300031715	Hardwood Forest Soil	MFRPSHESLLVQNAEIDRLELPRIQDDDELEALKASGALQPIIAGEALRFDPRLDPSRR
Ga0307474_101756321	3300031718	Hardwood Forest Soil	MFRPSHESLLLQNAEVNRLDLPRIQDDKELEALKAS
Ga0302319_102906613	3300031788	Bog	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKVSGALQPI
Ga0307478_102163741	3300031823	Hardwood Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKAD
Ga0307478_109047182	3300031823	Hardwood Forest Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKASGAL
Ga0307478_114792801	3300031823	Hardwood Forest Soil	MFRPSHESLLIQNAEINRLDLPRIQNDTELEALKADGSLLE
Ga0307479_105752322	3300031962	Hardwood Forest Soil	MFRPSHDSLLRQNEEIDRLELPRIADDIELEELKASH
Ga0307479_111425672	3300031962	Hardwood Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQALLPIRTS
Ga0307479_115847621	3300031962	Hardwood Forest Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKFSGALQPIIAGETLRFDPRL
Ga0307470_102863722	3300032174	Hardwood Forest Soil	MFRPSHESLLIQNAEIDRLELPRIQDETELEALKADGSLLQIKAGET
Ga0307471_1006684421	3300032180	Hardwood Forest Soil	MFRPSHESLILQNAEIDRLELPRIQDDDELEALKASQALLPIRA
Ga0348332_128828922	3300032515	Plant Litter	MFRPSHESLIIQNAEIDRLELPRIEDETELEALKADGSL
Ga0335078_101930853	3300032805	Soil	MFRPSHESLLIQNAEINRLELPRIQNDTELEALKGDGSLLPIRAGETLR
Ga0335080_105524501	3300032828	Soil	MFRPSHESLLIQNAEINRLELPRIQDETELEALKADGSLLPIV
Ga0335073_100609551	3300033134	Soil	MRWNPVFRPSHDSLLRQNAEIDRMDLPRIQDDAELQQLIASKDLVPIEENETLRFDPR
Ga0370514_198751_1_114	3300034199	Untreated Peat Soil	MFRPSHESLLLQNAEVDRLELPRIQDDDELEALKVSGA