Metagenome / Metatranscriptome Family F086034

Basic Information
Family ID	F086034
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	80 residues
Representative Sequence	MENPSGVWEAAPAACAAVICIASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Number of Associated Samples	103
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.92 %
% of genes near scaffold ends (potentially truncated)	35.14 %
% of genes from short scaffolds (< 2000 bps)	95.50 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (50.450 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.126 % of family members)
Environment Ontology (ENVO)	Unclassified (26.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.649 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.35% β-sheet: 20.99% Coil/Unstructured: 66.67%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13655	RVT_N	1.80
PF08388	GIIM	1.80
PF01844	HNH	1.80
PF05598	DUF772	1.80
PF00719	Pyrophosphatase	0.90
PF13561	adh_short_C2	0.90
PF05368	NmrA	0.90
PF06314	ADC	0.90
PF12849	PBP_like_2	0.90
PF07676	PD40	0.90
PF13683	rve_3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.90
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
All Organisms	root	All Organisms	49.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
cellular organisms	root	All Organisms → cellular organisms	49.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.03 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.03 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.80 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.90 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.03 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.80 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.03 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.80 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.03 %
Desulfonema	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema	1.80 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.03 %
Desulfonema limicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	0.90 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908044\|A5_c1_ConsensusfromContig90148	Not Available	960	Open in IMG/M
2140918007\|ConsensusfromContig191676	Not Available	921	Open in IMG/M
2166559005\|cont_contig82391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300001593\|JGI12635J15846_10754111	Not Available	559	Open in IMG/M
3300002914\|JGI25617J43924_10075404	Not Available	1231	Open in IMG/M
3300002915\|JGI25387J43893_1002082	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300005574\|Ga0066694_10500606	Not Available	567	Open in IMG/M
3300006031\|Ga0066651_10000088	All Organisms → cellular organisms → Bacteria	26727	Open in IMG/M
3300006041\|Ga0075023_100554726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300006046\|Ga0066652_100905455	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300006047\|Ga0075024_100396995	Not Available	701	Open in IMG/M
3300006162\|Ga0075030_100383956	Not Available	1119	Open in IMG/M
3300006174\|Ga0075014_100183514	Not Available	1044	Open in IMG/M
3300006642\|Ga0075521_10256611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300007255\|Ga0099791_10180920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300007258\|Ga0099793_10221935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300007265\|Ga0099794_10193969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300009088\|Ga0099830_10286253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300009090\|Ga0099827_10273439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1425	Open in IMG/M
3300009633\|Ga0116129_1021846	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300010154\|Ga0127503_10027323	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300010154\|Ga0127503_10904593	Not Available	643	Open in IMG/M
3300010379\|Ga0136449_100363497	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300010856\|Ga0126358_1092606	Not Available	744	Open in IMG/M
3300010860\|Ga0126351_1239316	Not Available	760	Open in IMG/M
3300010862\|Ga0126348_1233037	Not Available	532	Open in IMG/M
3300011044\|Ga0138545_137972	Not Available	677	Open in IMG/M
3300011049\|Ga0138554_103660	Not Available	678	Open in IMG/M
3300011050\|Ga0138571_107813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300011059\|Ga0138597_1019741	Not Available	571	Open in IMG/M
3300011071\|Ga0138595_1092826	Not Available	524	Open in IMG/M
3300011084\|Ga0138562_1201677	Not Available	655	Open in IMG/M
3300011120\|Ga0150983_10956112	Not Available	697	Open in IMG/M
3300011120\|Ga0150983_14281876	Not Available	550	Open in IMG/M
3300011269\|Ga0137392_11445485	Not Available	547	Open in IMG/M
3300011270\|Ga0137391_10336293	Not Available	1298	Open in IMG/M
3300011270\|Ga0137391_10459065	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012199\|Ga0137383_10135838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1797	Open in IMG/M
3300012208\|Ga0137376_11763068	Not Available	510	Open in IMG/M
3300012224\|Ga0134028_1042517	Not Available	609	Open in IMG/M
3300012285\|Ga0137370_10219578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1120	Open in IMG/M
3300012363\|Ga0137390_11749070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	555	Open in IMG/M
3300012364\|Ga0134027_1053767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300012388\|Ga0134031_1024694	Not Available	638	Open in IMG/M
3300012391\|Ga0134035_1307999	Not Available	584	Open in IMG/M
3300012582\|Ga0137358_10267570	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300012683\|Ga0137398_10927779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300012917\|Ga0137395_11074822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300012918\|Ga0137396_10815342	Not Available	686	Open in IMG/M
3300012923\|Ga0137359_10497174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300012925\|Ga0137419_10361816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1125	Open in IMG/M
3300012929\|Ga0137404_10793378	Not Available	860	Open in IMG/M
3300012944\|Ga0137410_10967895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300013770\|Ga0120123_1125125	Not Available	599	Open in IMG/M
3300014164\|Ga0181532_10385512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema	780	Open in IMG/M
3300014489\|Ga0182018_10256936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300015241\|Ga0137418_11243791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300016270\|Ga0182036_11291675	Not Available	609	Open in IMG/M
3300017928\|Ga0187806_1275931	Not Available	587	Open in IMG/M
3300017933\|Ga0187801_10107982	Not Available	1060	Open in IMG/M
3300018433\|Ga0066667_10595454	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300019789\|Ga0137408_1181943	Not Available	734	Open in IMG/M
3300019789\|Ga0137408_1416767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300019888\|Ga0193751_1063590	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300020170\|Ga0179594_10195989	Not Available	756	Open in IMG/M
3300020170\|Ga0179594_10408682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300020199\|Ga0179592_10161087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300020579\|Ga0210407_10202170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300021307\|Ga0179585_1037056	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300021402\|Ga0210385_10617357	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300021432\|Ga0210384_10231115	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300021479\|Ga0210410_10802083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300021479\|Ga0210410_11166777	Not Available	661	Open in IMG/M
3300022504\|Ga0242642_1034369	Not Available	745	Open in IMG/M
3300022508\|Ga0222728_1054186	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300022532\|Ga0242655_10210089	Not Available	599	Open in IMG/M
3300022712\|Ga0242653_1049186	Not Available	681	Open in IMG/M
3300022715\|Ga0242678_1024582	Not Available	757	Open in IMG/M
3300022722\|Ga0242657_1073500	Not Available	798	Open in IMG/M
3300022724\|Ga0242665_10184557	Not Available	679	Open in IMG/M
3300022881\|Ga0224545_1005597	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300026310\|Ga0209239_1142573	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300026312\|Ga0209153_1295291	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300026494\|Ga0257159_1029563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300026551\|Ga0209648_10418202	Not Available	862	Open in IMG/M
3300027575\|Ga0209525_1147091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300027587\|Ga0209220_1063311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300027645\|Ga0209117_1037922	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300027862\|Ga0209701_10306506	Not Available	911	Open in IMG/M
3300027882\|Ga0209590_10448704	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300029636\|Ga0222749_10310504	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300030848\|Ga0075388_11617937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300030966\|Ga0075383_11376671	Not Available	835	Open in IMG/M
3300031057\|Ga0170834_100782637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300031057\|Ga0170834_104355425	Not Available	796	Open in IMG/M
3300031122\|Ga0170822_15837724	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300031231\|Ga0170824_101422355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300031231\|Ga0170824_128558747	Not Available	667	Open in IMG/M
3300031446\|Ga0170820_11867633	Not Available	668	Open in IMG/M
3300031474\|Ga0170818_100280870	Not Available	605	Open in IMG/M
3300031545\|Ga0318541_10376294	Not Available	793	Open in IMG/M
3300031573\|Ga0310915_10865403	Not Available	634	Open in IMG/M
3300031719\|Ga0306917_10405897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300031747\|Ga0318502_10783725	Not Available	577	Open in IMG/M
3300031754\|Ga0307475_11048551	Not Available	639	Open in IMG/M
3300031896\|Ga0318551_10541753	Not Available	669	Open in IMG/M
3300031962\|Ga0307479_11592838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300032042\|Ga0318545_10230753	Not Available	664	Open in IMG/M
3300032089\|Ga0318525_10713269	Not Available	510	Open in IMG/M
3300032094\|Ga0318540_10527269	Not Available	570	Open in IMG/M
3300032160\|Ga0311301_10939397	Not Available	1157	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.09%
Aquatic	Environmental → Aquatic	9.01%
Modeled	Engineered → Modeled	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.19%
Freshwater	Environmental → Aquatic → Freshwater	5.41%
Sediment	Environmental → Aquatic → Sediment	3.60%
Peat	Environmental → Terrestrial → Peat	0.90%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.88%
Loam	Environmental → Terrestrial → Soil → Loam	5.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011044	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 26 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011049	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 35 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011050	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011059	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 44 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011071	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011084	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_c1_00105480	2124908044	Soil	VEEATIVWEAAPAACAAIICFASYIGSSSVLEFEHQQEVSSVSGEVILSHRGDATSICPITGQRSLPRNSDTRTAIDPPYG
A_all_C_02270850	2140918007	Soil	VEEATIVWEAAPAACAAIICFASYIGSSNVLEFEHQQEVSSVSGEVILSPRGDATSICPITGQPSLAPISVTRIAIDPPYG
cont_0391.00005340	2166559005	Simulated	VWEAAPAACTAVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
JGI12635J15846_107541111	3300001593	Forest Soil	MEEPSGVWEAAPAACAAVICIASFIGSTNGLEFERHREVSPVSGEVMLSRRGNATFICPITGQHSLPRNSDTRAAIDPPYG*
JGI25617J43924_100754041	3300002914	Grasslands Soil	MEDPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATCICPITGQHSLPRNSDTRTAIDPPYG*
JGI25387J43893_10020822	3300002915	Grasslands Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLSRYSDTRTAIDPPYG*
Ga0066694_105006061	3300005574	Soil	NLLDTDLRPTRTAMEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLPRNSDTRTAIDPPYG*
Ga0066651_1000008817	3300006031	Soil	MEEPSGVAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLPRNSDTRTAIDPPYG*
Ga0075023_1005547261	3300006041	Watersheds	VCEAAPTACAVVICFASFIGSANVLEFEHHREVCSVSGEVMLSQKGNATSICPITGQHSLFLSSAIRIAIDPPYGFTTP*
Ga0066652_1009054553	3300006046	Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLFLSSV*
Ga0075024_1003969951	3300006047	Watersheds	AVEEATIVWEAAPAACAAIICFASYIGSTNVLEFEHHREVSSVSGEVILSHRADATSICPITGQRSLPRNSDTRTAIDPPYG*
Ga0075030_1003839563	3300006162	Watersheds	WINPPGVCEAAPTACAVVICFASFIGSANVLEFEHHREVCSVSGEVMLSQKGNATSICPITGQHSLFLSSAIRIAIDPPYGLTTP*
Ga0075014_1001835142	3300006174	Watersheds	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATSICPITGQHSLPRNSDTRTAIDPPCG*
Ga0075521_102566112	3300006642	Arctic Peat Soil	VEDPSGVWEAAPAAYAVVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATTICPITGQHSLPRNSDTRTAIDPPYG*
Ga0099791_101809201	3300007255	Vadose Zone Soil	MEDPSGVWEAAPAACAAVICVASLIGSTNGLEFEHHREVSPVSGEVILSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG*
Ga0099793_102219352	3300007258	Vadose Zone Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLPRNSDTRTAIDPPYG*
Ga0099794_101939692	3300007265	Vadose Zone Soil	MEKPSGVWEAAPAACAAVICIASFIGSTNGLEFERRREVSPVSGEVMLSRRGNATSICPITGQHSLLRNSDTRTAIDPPYG*
Ga0099830_102862531	3300009088	Vadose Zone Soil	VEDPSGVWEAAPAACAAVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG*
Ga0099827_102734391	3300009090	Vadose Zone Soil	VEEATIVWEAAPAACAAIICFASYIGSTNVLEFEHHREVSSVSGEVILSHRADATSICPITGQHSLPRNSDTRTAIDPPYG*
Ga0116129_10218464	3300009633	Peatland	VWEAAPAACAAIICFASYIGSTNVLEFEPHREVSSVSSEVILSHQGDATSICPITGQHSLPRNSDTRTAIDPPYG*
Ga0127503_100273231	3300010154	Soil	VWEAAPAACAAVICIASYIGSTNGLEFEHHREVSSVSGEVMLSHQGNATSVCPITGQHSLPRISDIRSAIDPPYG*
Ga0127503_109045931	3300010154	Soil	TNVWEAAPAACAAVICFASCIGSTNVLELEHHREVSSVSGEVMLSHRGDSTFICPITGQHSLPRNSDSRTAIDPPYG*
Ga0136449_1003634972	3300010379	Peatlands Soil	MEDPSGVWEAAPAACAAVICIASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG*
Ga0126358_10926061	3300010856	Boreal Forest Soil	MWEAAPAACAAVICFASDIGSTNVLEFEHHREVSSVSGEVILSHRRDATSICPITGQHSLPRNSDTRTAIDSPYG*
Ga0126351_12393161	3300010860	Boreal Forest Soil	MENPSGVWEAAPAACAAVICFASYIGSTKVLEFEHHREVSTVSGEVILSHRGDATSICPITGQHSLPRNSDTRTAIDPPYG*
Ga0126348_12330371	3300010862	Boreal Forest Soil	MENPSGVWEAAPAAYAAVICIASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSVCPITGQHSLSRNSDTRTAIDPPYG*
Ga0138545_1379721	3300011044	Peatlands Soil	LDTDLRPTRTAVGETTSVWEAAPAACAVVICFASCIGSTNGLELEHHREVSSVSGEVMWSHRGDATSVCPITGQRSLSRNSDTRTTIDPPCG*
Ga0138554_1036601	3300011049	Peatlands Soil	DTDLRPTRTAVGETTSVWEAAPAACAVVICFASCIGSTNGLELEHHREVSSVSGEVMLSHRGDATSVCPITGQRSLSRNSDTRTTIDPPCG*
Ga0138571_1078131	3300011050	Peatlands Soil	VEDPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVCPVSGEVMLSRRGNATSICPITGQHSLFLSSAIRIAIDPPYGFTTPIGERYGLTLFR*
Ga0138597_10197411	3300011059	Peatlands Soil	LDTDLRPTRTAVEEATIVWEAAPAACAAIICFASYIGSTNVLEFEHHREVSSVSGEVILSHRGDATSICPITGQPSLPRNSDTRTAIDPPYG*
Ga0138595_10928261	3300011071	Peatlands Soil	VEDPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVCPVSGEVMLSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG*
Ga0138562_12016771	3300011084	Peatlands Soil	AVGETTSVWEAAPAACAVVICFASCIGSTNGLELEHHREVSSVSGEVMLSHRGDATSVCPITGQRSLSRNSDTRTTIDPPCG*
Ga0150983_109561121	3300011120	Forest Soil	MEEPSGVWEAAPAACAAVICIASFIGSTNGLEFERHREVSPVSGEVMLSRRGDATFICPITGQHSLPRNSDTRAAIDPPYG*
Ga0150983_142818762	3300011120	Forest Soil	MENPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSVCPITGQHSLPRNSDTRTAIDPPYG*
Ga0137392_114454851	3300011269	Vadose Zone Soil	VWEAAPVACATVICFASYISSTNVLEFEHHREVSPVSGEVMLSRQGNATFICPITGQHSLSRNSDTRTALDPPYG*
Ga0137391_103362931	3300011270	Vadose Zone Soil	MEDPSGVWEAAPAACAAIICVASFIGSTNVLEFEHHREVSPVSGEVMLSRQGNATFICPITGQHSLSRNSDTRTAIDPPYG*
Ga0137391_104590652	3300011270	Vadose Zone Soil	VEDPSGVWEAAPAACAAVICFASFIGSTNGLEFEHHREVSPVSGEVMLARRGNATSICPITGQHSLPRNSDTRTAIDPPYG*
Ga0137383_101358383	3300012199	Vadose Zone Soil	MEKPSGVWEAAPAACAAVICIASFIGSTSGLEFERHREVSPVSGEVMLSRRGNATSICPITGQHSLLRNSDTRTAIDPPYG*
Ga0137376_117630681	3300012208	Vadose Zone Soil	MEKPSGVWEAAPAACAAVICIASFIGSTNGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLSRYSDTRTAIDPPYG*
Ga0134028_10425171	3300012224	Grasslands Soil	QLARRWKNHQACAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLSRYSDTRTAIDPPYG*
Ga0137370_102195781	3300012285	Vadose Zone Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLPRNSDTRTAVDPPYG*
Ga0137390_117490701	3300012363	Vadose Zone Soil	LDTDLRPTRTAVEEATIVWEAAPAACAAIICFASCIGSTNVLEFEHHREVSSVSGEVILSHRADATSICPITGQRSLPRNSDTRTAIDPPYG*
Ga0134027_10537672	3300012364	Grasslands Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLSRYS
Ga0134031_10246941	3300012388	Grasslands Soil	RRWKNHQACAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLPRNSDTRTAIDPPYG*
Ga0134035_13079991	3300012391	Grasslands Soil	QACAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLPRNSDTRTAIDPPYG*
Ga0137358_102675702	3300012582	Vadose Zone Soil	VENPPNVWEAAPAACAAVVCIASYIGSTTGLEFEHRREVSSVSGEVILSHQGYATSVCPITGQHSLPRNSDIRSAIDPPYG*
Ga0137398_109277792	3300012683	Vadose Zone Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERQREVSPASGEVMLSRRGNATPICPITGQHSLSRYSDTRTAIDPPYG*
Ga0137395_110748221	3300012917	Vadose Zone Soil	VCEAAPTACAVVICFASFIGSANVLEFEHHREVCAVSGEVMLSQKGNATSICPITGQHSLFLSSAIRIAIDPPYGFTTPIGERYGLTLFR*
Ga0137396_108153421	3300012918	Vadose Zone Soil	VEDPSGVWEAAPAACAAVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLSRNSDTRAAIDPPYG*
Ga0137359_104971742	3300012923	Vadose Zone Soil	MEEPSGVWEAAPAACAAVICIASFIGSTNGLEFERRREVSPVSGEVMLSRRGNATPICPITGQHSLSRYSDTRTAIDPPYG*
Ga0137419_103618162	3300012925	Vadose Zone Soil	VENPPNVWEAAPAACAAVVCIASYIGSTNGLEFEHRREVSSVSGEVILSHQGYATSVCPITGQHSLPRNSDIRSAIDPPYG*
Ga0137404_107933781	3300012929	Vadose Zone Soil	MEDPSGVWEAAPAACAAVICVASLIGSTNGLEFEHHREVSPVSGEVMLSRRGNATPICPITGQHSLSRYSDTRTAIDPPYG*
Ga0137410_109678951	3300012944	Vadose Zone Soil	VKLHQRQCAVVICFASLIGSANVLEFEHHREVCSVSGEVMLSQKGNATSICPITGQHSLFLSSAIRIAIDPPYGYTTP*
Ga0120123_11251251	3300013770	Permafrost	MENSPGVWEAAPTACAVVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQPSLPRNSDTRTAIDPPYG*
Ga0181532_103855121	3300014164	Bog	ATIVWEAAPAACAAIICFASYIGSTNVLEFEHHREVSSVSGEVILSHRGDATSICPITGQRSLPRNSDTRTAIDPPYG*
Ga0182018_102569362	3300014489	Palsa	MENPSDVWEAAPAACAAVICIASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLSRNSDTRIAIDPPYG*
Ga0137418_112437911	3300015241	Vadose Zone Soil	TACAVVICFASCIGSANVLEFDHHREVCSVSGEVMLSQKGNATSIRPITGQHSLFLSSTIRIAIDPPYGFTTP*
Ga0182036_112916752	3300016270	Soil	VWEAAPAACAAVICIASYIGSTNGLEFEHHREVSSVSGKVMLSHQGNATFVCPITGQRSLLRNSDIRSAIDPPYG
Ga0187806_12759311	3300017928	Freshwater Sediment	MENPSGVWEAAPAACAAVICIASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDT
Ga0187801_101079821	3300017933	Freshwater Sediment	MENPSGVWEAAPAACAAVICIASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0066667_105954541	3300018433	Grasslands Soil	VWEAAPAAYAAVICLASDVGSTNVLEFEHHREVSSVSGEVILSHRGDATCICPITGQHSLPRNS
Ga0137408_11819431	3300019789	Vadose Zone Soil	VCEAAPTACAVVICFASFIGSANVLEFEHHREVGSVSGEVMLSQKGNATSICPITGQPSLFLSSAIRIAYPHRHRSALQL
Ga0137408_14167671	3300019789	Vadose Zone Soil	VCEAAPTACAVVICFASLIGSANVLEFEHHREVCSVSGEVMLSQKGNATSICPITGQHSLFLSSAIRIAIDPPYGFTTPIGERYGLTLFR
Ga0193751_10635902	3300019888	Soil	MENPSGVWEAAPAAYAAVICIASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG
Ga0179594_101959891	3300020170	Vadose Zone Soil	MEDPSGVWEAAPAACAAVICVASLIGSTNGLEFEHHREVSPVSGEVILSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0179594_104086822	3300020170	Vadose Zone Soil	MEKPSGVWEAAPAACAAVICIASFIGSTNGLEFERRREVSPVSGEVMLSRRGNATSICPITGQHSLLRNSDTRT
Ga0179592_101610872	3300020199	Vadose Zone Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLSRYSDTRTAIDPPYG
Ga0210407_102021703	3300020579	Soil	MEKPSGVWEAAPAAYAAVICIASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG
Ga0179585_10370561	3300021307	Vadose Zone Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLPRNSDTRTAIDPPYG
Ga0210385_106173571	3300021402	Soil	VPEAAPTACAVIICFASYIGSINGLEREHRRKVCSVSGEAMLSQEGDATSICPITGQPSL
Ga0210384_102311153	3300021432	Soil	MEKPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG
Ga0210410_108020833	3300021479	Soil	MEEPSGVWEAAPAACAAVICIASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG
Ga0210410_111667771	3300021479	Soil	TRTAVEDPSDVWEAAPAACAAVICFASYIGSTSGLEFEHHREVSPVSGELMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0242642_10343692	3300022504	Soil	VWEAAPAAYAAVICIASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG
Ga0222728_10541862	3300022508	Soil	MENPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVSSVSGEVMLSHRGDATSICPITGQHSLPRNSDTRTAVDPPYGFTSPCGE
Ga0242655_102100891	3300022532	Soil	LRPTRTAVEDPSDVWEAAPAACAAVICFASYIGSTSGLEFEHHREVSPVSGEIMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0242653_10491861	3300022712	Soil	DLRPTRTAMENPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSICPITGQHSLSRNSDTRTAIDPPYG
Ga0242678_10245821	3300022715	Soil	MENPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVSPVSGEVMLSHGGDATAICPITGQHSLPRNSDSRTAIDPPYG
Ga0242657_10735002	3300022722	Soil	MEEPSGVWEAAPAACAAVICIASFIGSTNGLEFERHREVSPVSGEVMLSRRGNATSICPITGQHSLSRNSDTRAAVDPPYG
Ga0242665_101845571	3300022724	Soil	EKPSGVWEAAPAAYAAVICIASFIGSTNGLEFEHHREVSSVSGEVMWSRRGNATSICPITGQHSLSRISGTRTAIDPPYG
Ga0224545_10055973	3300022881	Soil	VGEAAPATCAAVICFASYIGPTNVLEFEHHREVSSVSGEVILSHRADATSICPITGQHSLPRNSDTRTAIDPLYG
Ga0209239_11425732	3300026310	Grasslands Soil	MEKPSGVWEAAPAACAAVICIASFIGSTNGLEFERRREVSPVSGEVMLSRRGNATSICPITGQHSLLRNSDTRTAIDPPYG
Ga0209153_12952911	3300026312	Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRRGNATPICPITGQHSLSRYSDT
Ga0257159_10295631	3300026494	Soil	VCEAAPTACAVVICFASFIGSANVLEFEHHREVCAVSGEVMLSQKGNATSICPITGQHSLFLSSAIRIAIDPPYGYTTP
Ga0209648_104182021	3300026551	Grasslands Soil	MEDPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATCICPITGQHSLPRNSDTRTAIDPPYG
Ga0209525_11470911	3300027575	Forest Soil	VWEAAPAAEAAVICFASYIGSTNVLEFEHHREVSSVSGEVMLSHRGDATSICPITGQHSLPRNSDTRTAVDPPYGFTSPCGERYGL
Ga0209220_10633112	3300027587	Forest Soil	MEDPSGVWEAAPAACAAVICIASLIGSTDGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0209117_10379221	3300027645	Forest Soil	VCEAAPTACAVVICFASLIGSANVLEFEHHREVCSVSGEVMLSQKGNATSICPITGQHSLFLSSAIRIAVDPPYGFTTPIGERYGLILFR
Ga0209701_103065061	3300027862	Vadose Zone Soil	VEDPSGVWEAAPAACAAVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0209590_104487041	3300027882	Vadose Zone Soil	VWEAAPAACAAIICFASYIGSTNVLEFEHHREVSSVSGEVILSHRADATSICPITGQRSLPRNSDTRTAIRSTLRLIF
Ga0222749_103105041	3300029636	Soil	TAVEDPSDVWEAAPAACAAVICFASYIGSTSGLEFEHHREVSPVSGELMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0075388_116179372	3300030848	Soil	MEEPSGVWEAAPAACAAVICIASFIGSTNGLEFERHREVSPVSGEVMLSRRGNATSICPITGQHSLPRNSDTRTAIDPPYG
Ga0075383_113766712	3300030966	Soil	VEDPSGVWEAAPAAYAAVICFASFIGSTNGLEFEHHREVSPVSGEVMLSRRGNATTICPITGQRSLPRNSDTRTAIDPPYG
Ga0170834_1007826371	3300031057	Forest Soil	MEEPSGVWEAAPAACAAVICIASFIGSTNGLEFERHREVSPVSGEVMLSRRGNATFICPITGQHSLLRNSDTRTAIDPPYG
Ga0170834_1043554251	3300031057	Forest Soil	VWEAAPAACAAVICIAPYIGSTNGLEFEHHREVSSVSGKVMLSHPGNATFVCPITGQRSLLRNSDIRSAIDPPYG
Ga0170822_158377243	3300031122	Forest Soil	VWEAAPAACAAVICIAPYIGSTNGLEFEHHREVSSVSGKVMLSHPGNATFVCPITGQRSLLRNSDIRSAIDPPYD
Ga0170824_1014223551	3300031231	Forest Soil	MEEPSGVWEAATAACAAVICIASFIGSTNGLEFERHREVSPVSGEVMLSRRGNATFICPITGQHSLLRNSDTRTAIDPPYG
Ga0170824_1285587471	3300031231	Forest Soil	VCEAAPTALAVVICFASFIGSSNVLEFEHHREVGSVSGEVMLLSQKDNATSIYPITGQHSLFLSSATPIAIDPPCGGSSPYGE
Ga0170820_118676332	3300031446	Forest Soil	VWEAAPAACAAVICIAPYIGSTNGLEFEHHREVSSVSGKVMLSHQGNATFVCPITGQRSLLRNSDIRSAIDPPYG
Ga0170818_1002808701	3300031474	Forest Soil	LLDTDLRPTRTAVEKTTIVWEAAPAARAAVICFASCIGSTNVLELEHHREVSSVSGEVMLPHRGDSTSVCPITGQHSLPRNSDTRTAIDPPYG
Ga0318541_103762941	3300031545	Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLPRQGNATSICPITGQHSLPRNSDTRTAIDPPCG
Ga0310915_108654031	3300031573	Soil	KQNLLDTDLRPTRTAMEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLPRQGNATSICPITGQHSLPRNSDTRTAIDPPCG
Ga0306917_104058971	3300031719	Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATSICPITGQHSLPRNSDTRTAIDPPCG
Ga0318502_107837251	3300031747	Soil	GYNPLAGCEAAPTACAVVICVASFIGSANVLEFEYHREVGSVSGEVMWSHKGNATSICPITGQHSLFLRSAIRITIDPPERYGLTLFS
Ga0307475_110485512	3300031754	Hardwood Forest Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATSICPITGQHSLARNSDTRAAIDPPCG
Ga0318551_105417531	3300031896	Soil	AMEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATSICPITGQHSLPRNSDTRTAIDPPCG
Ga0307479_115928381	3300031962	Hardwood Forest Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATSICPITGQHSL
Ga0318545_102307531	3300032042	Soil	LLDTDLRPTRTAMEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLPRQGNATSICPITGQHSLPRNSDTRTAIDPPCG
Ga0318525_107132691	3300032089	Soil	MGNSPGVWEAAPTACAVVICFASCIGSINGLECEHRRKVCSVSGDVMLSRTGDATSICAITAQHSLPFALPY
Ga0318540_105272691	3300032094	Soil	MEEPSGVWEAAPAACAAVICIASFIGSANGLEFERHREVSPVSGEVMLSRQGNATSICPITGQHSLPRNSDTR
Ga0311301_109393971	3300032160	Peatlands Soil	VCEAAPTACAVVICFASFIGSANVLEFEHHREVCSVSGEVMLSHKGNATSICPITGQHSLFLSSAIRIAIDPPYGFTTP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086034

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign