Metagenome / Metatranscriptome Family F086032

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086032
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	139 residues
Representative Sequence	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWAGLLMAEDEKLGASPLGSMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLMAAQGEQDDEDARALLDNIQQELTSHVRTMHEH
Number of Associated Samples	78
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.36 %
% of genes near scaffold ends (potentially truncated)	44.14 %
% of genes from short scaffolds (< 2000 bps)	80.18 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (81.081 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (29.730 % of family members)
Environment Ontology (ENVO)	Unclassified (35.135 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.550 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.87% β-sheet: 0.00% Coil/Unstructured: 37.13%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.0: automated matches	d4a25a_	4a25	0.90686
a.25.1.1: Ferritin	d4cy9a1	4cy9	0.89144
a.25.1.1: Ferritin	d2cf7a_	2cf7	0.8913
a.25.1.0: automated matches	d5hjfa_	5hjf	0.8896
a.25.1.1: Ferritin	d3ak8a_	3ak8	0.88721

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00378	ECH_1	5.41
PF00196	GerE	4.50
PF13462	Thioredoxin_4	4.50
PF04909	Amidohydro_2	2.70
PF14833	NAD_binding_11	1.80
PF13180	PDZ_2	1.80
PF03446	NAD_binding_2	1.80
PF03861	ANTAR	1.80
PF13365	Trypsin_2	1.80
PF11225	DUF3024	0.90
PF03807	F420_oxidored	0.90
PF01527	HTH_Tnp_1	0.90
PF03988	DUF347	0.90
PF10009	DUF2252	0.90
PF07690	MFS_1	0.90
PF03717	PBP_dimer	0.90
PF11975	Glyco_hydro_4C	0.90
PF00498	FHA	0.90
PF08681	DUF1778	0.90
PF05726	Pirin_C	0.90
PF03050	DDE_Tnp_IS66	0.90
PF00440	TetR_N	0.90
PF05977	MFS_3	0.90
PF13458	Peripla_BP_6	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	1.80
COG0768	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	Cell cycle control, cell division, chromosome partitioning [D]	0.90
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.90
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.90
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.90
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.90
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.08 %
Unclassified	root	N/A	18.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.08 %
Unclassified	root	N/A	18.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.08 %
Unclassified	root	N/A	18.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	74.77 %
Unclassified	root	N/A	18.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	74.77 %
Unclassified	root	N/A	18.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.51 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.70 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.80 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.70 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	1.80 %
Hylemonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella	0.90 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.90 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.70 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.80 %
Hylemonella gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	0.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.90 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.90 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.70 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.80 %
Streptomyces guryensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	0.90 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.90 %
Hylemonella gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	0.90 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.70 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.80 %
Mycobacterium canettii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii	0.90 %
Streptomyces guryensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	0.90 %
Hylemonella gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	0.90 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.70 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.80 %
Mycobacterium canettii CIPT 140010059	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	0.90 %
Streptomyces guryensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	0.90 %
Hylemonella gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	0.90 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1007846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300004080\|Ga0062385_10755174	Not Available	632	Open in IMG/M
3300004082\|Ga0062384_101164196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300004091\|Ga0062387_100376311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	947	Open in IMG/M
3300004092\|Ga0062389_100039662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3633	Open in IMG/M
3300004092\|Ga0062389_100092968	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300004092\|Ga0062389_100139183	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300004092\|Ga0062389_100994965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1023	Open in IMG/M
3300004092\|Ga0062389_103256898	Not Available	608	Open in IMG/M
3300004635\|Ga0062388_100149451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1769	Open in IMG/M
3300005921\|Ga0070766_10469880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300006059\|Ga0075017_100264716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	1261	Open in IMG/M
3300006059\|Ga0075017_100506171	Not Available	916	Open in IMG/M
3300006086\|Ga0075019_10706727	Not Available	638	Open in IMG/M
3300006102\|Ga0075015_100322697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	855	Open in IMG/M
3300006102\|Ga0075015_100663959	Not Available	616	Open in IMG/M
3300006162\|Ga0075030_100111481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2227	Open in IMG/M
3300006174\|Ga0075014_100278709	Not Available	874	Open in IMG/M
3300006893\|Ga0073928_10504497	Not Available	867	Open in IMG/M
3300009645\|Ga0116106_1297150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300009665\|Ga0116135_1172721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300009698\|Ga0116216_10544558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300010379\|Ga0136449_100138032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4830	Open in IMG/M
3300010379\|Ga0136449_103636504	Not Available	584	Open in IMG/M
3300014162\|Ga0181538_10217207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300014165\|Ga0181523_10143239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1411	Open in IMG/M
3300014169\|Ga0181531_10003798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9213	Open in IMG/M
3300014200\|Ga0181526_10627185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300014201\|Ga0181537_10685872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300014489\|Ga0182018_10005408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10295	Open in IMG/M
3300014489\|Ga0182018_10041298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2868	Open in IMG/M
3300014489\|Ga0182018_10319528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300014493\|Ga0182016_10087978	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300014493\|Ga0182016_10237804	Not Available	1149	Open in IMG/M
3300014495\|Ga0182015_10084757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2221	Open in IMG/M
3300014495\|Ga0182015_10172657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1459	Open in IMG/M
3300014499\|Ga0182012_10229847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1283	Open in IMG/M
3300014499\|Ga0182012_10667642	Not Available	665	Open in IMG/M
3300014501\|Ga0182024_10203605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	2703	Open in IMG/M
3300014501\|Ga0182024_10749710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1198	Open in IMG/M
3300014501\|Ga0182024_10845391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1110	Open in IMG/M
3300014501\|Ga0182024_10919535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300014501\|Ga0182024_11109904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	933	Open in IMG/M
3300014638\|Ga0181536_10283952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300014657\|Ga0181522_10625489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300014658\|Ga0181519_10591539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300014838\|Ga0182030_10001328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50679	Open in IMG/M
3300014838\|Ga0182030_10092458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4254	Open in IMG/M
3300014839\|Ga0182027_10010033	All Organisms → cellular organisms → Bacteria	13514	Open in IMG/M
3300018016\|Ga0187880_1354565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300018025\|Ga0187885_10530628	Not Available	524	Open in IMG/M
3300018033\|Ga0187867_10048491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2562	Open in IMG/M
3300018035\|Ga0187875_10406252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300018042\|Ga0187871_10324631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300018043\|Ga0187887_10251009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300018044\|Ga0187890_10541001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300018047\|Ga0187859_10627453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300019786\|Ga0182025_1320041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1466	Open in IMG/M
3300021407\|Ga0210383_10402571	Not Available	1181	Open in IMG/M
3300022557\|Ga0212123_10366201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300023090\|Ga0224558_1037261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2135	Open in IMG/M
3300023101\|Ga0224557_1168755	Not Available	790	Open in IMG/M
3300027648\|Ga0209420_1023953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300027745\|Ga0209908_10025360	Not Available	1163	Open in IMG/M
3300027895\|Ga0209624_10030687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3414	Open in IMG/M
3300028773\|Ga0302234_10491106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300028789\|Ga0302232_10595410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300028882\|Ga0302154_10276847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300028906\|Ga0308309_11040285	Not Available	709	Open in IMG/M
3300029910\|Ga0311369_11318769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300029911\|Ga0311361_11203114	Not Available	606	Open in IMG/M
3300029943\|Ga0311340_10719573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300029951\|Ga0311371_10784426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300029999\|Ga0311339_10078078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	4221	Open in IMG/M
3300029999\|Ga0311339_10096577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3669	Open in IMG/M
3300029999\|Ga0311339_10167970	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300029999\|Ga0311339_10400001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1432	Open in IMG/M
3300029999\|Ga0311339_10434431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
3300030007\|Ga0311338_10253581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1976	Open in IMG/M
3300030007\|Ga0311338_10752255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300030007\|Ga0311338_11611882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300030399\|Ga0311353_10600880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300030503\|Ga0311370_10656936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1242	Open in IMG/M
3300030503\|Ga0311370_10660512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300030520\|Ga0311372_12064688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300030520\|Ga0311372_13037656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300030524\|Ga0311357_10985168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300030580\|Ga0311355_10877243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300030580\|Ga0311355_11909883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300030617\|Ga0311356_10514546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1168	Open in IMG/M
3300030617\|Ga0311356_11741890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300030618\|Ga0311354_11440134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300030688\|Ga0311345_10998512	Not Available	630	Open in IMG/M
3300030862\|Ga0265753_1151127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300030906\|Ga0302314_10521393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300030906\|Ga0302314_11357063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300031027\|Ga0302308_10806840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300031028\|Ga0302180_10173640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300031233\|Ga0302307_10710264	Not Available	504	Open in IMG/M
3300031234\|Ga0302325_10211841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3311	Open in IMG/M
3300031234\|Ga0302325_10867120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300031234\|Ga0302325_10967266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1169	Open in IMG/M
3300031234\|Ga0302325_12406963	Not Available	632	Open in IMG/M
3300031524\|Ga0302320_10370001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1833	Open in IMG/M
3300031708\|Ga0310686_112283944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1637	Open in IMG/M
3300031708\|Ga0310686_113232319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300031788\|Ga0302319_10593338	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300032160\|Ga0311301_11463871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	845	Open in IMG/M
3300033887\|Ga0334790_141145	Not Available	734	Open in IMG/M
3300034282\|Ga0370492_0279356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.57%
Aquatic	Environmental → Aquatic	32.43%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	36.94%
Soil	Environmental → Terrestrial → Soil	30.63%
Freshwater	Environmental → Aquatic → Freshwater	24.32%
Sediment	Environmental → Aquatic → Sediment	6.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	36.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.31%
Loam	Environmental → Terrestrial → Soil → Loam	5.41%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	36.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	22.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	17.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	29.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.31%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.41%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	5.41%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	4.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10078461	3300001084	Forest Soil	ADIPDLLKGARTSTDTPPPHDAIAALNGVLSEVLDVVQEVKQAYRKVPQNHEIHGELDRLFEDLKTWASVLMAEDEQLGTTALGRIPTAAGRTPPNLWPGNPTDEEVRRTILSHLDLLSVHVTAAHGEQDDEGARVLLGNIQQELMTHVRTLNAL*
Ga0062385_107551741	3300004080	Bog Forest Soil	MKGARTSTDTPPPHDGIAALNGVLSEVIDVVQDVKQASRKVPQNTEMHGELDRLFEDLRNWASLLMAEDEQLGSSPLGSIPSVAGRTPPNLWPGTPTDEEVRRTILDHLDQLSIHLAAAEAEQDDQGALDLLGNIKQELMSHVRTLSDL*
Ga0062384_1011641961	3300004082	Bog Forest Soil	MPSDDAIVALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRVLPNLWPGNPTDEEVRRTILDHLDQLSAHVTAAQGEQDDEDARALLDNIQQELMSHVRTMHELSF
Ga0062387_1003763112	3300004091	Bog Forest Soil	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNLVSVAGRTPPNLWPGSPTDEEVRRTILEHLDQLSAHVTAAQGEQDDEDARALLENIQQELTGHVRTMH
Ga0062389_1000396624	3300004092	Bog Forest Soil	VQDVKQADRKVPRNHELHGVLDRLFADLRTWASLLMAEDEQLGASPLGRMPSVAGRTPPNLWPGNPTDEEVRLTILDHLDQLSVHLAAAQEEQDDEEARALLGSIQQELTGHVRALRNP*
Ga0062389_1000929682	3300004092	Bog Forest Soil	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNLVSVAGRTPPNLWPGSPTDEEVRRTILEHLDQLSAHVTAAQGEQDDEDARALLENIQQELTGHVRTMHELSI*
Ga0062389_1001391832	3300004092	Bog Forest Soil	MPSDDAIVALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRVLPNLWPGNPTDEEVRRTILDHLDQLSAHVTAAQGEQDDEDARALLDNIQQELMSHVRTMHELSF*
Ga0062389_1009949652	3300004092	Bog Forest Soil	VKGASTSTDTPTPHDAIAALNGVLSEVIDVVQDVKQADRKVPHNHELHGELDRLFDDLRTWASLLMAEDEQLGASPLGRMPSVAGRTPPNLWPGNPTDDEVRRTILDHLDQLSVHVAAAQGEQDDGDARALLGSIQQELMSHVRALREP*
Ga0062389_1032568981	3300004092	Bog Forest Soil	LSEVIDVVQDVKQASRKVPQNTEMHGELDRLFEDLRNWASLLMAEDEQLGSSPLGSIPSVAGRTPPNLWPGTPTDEEVRRTILDHLDQLSIHLAAAEAEQDDQGALDLLGNIKQELMSHVRTLSDL*
Ga0062388_1001494514	3300004635	Bog Forest Soil	SEVIDVVQDVKQADRKVPRNHELHGVLDRLFADLRTWASLLMAEDEQLGASPLGRMPSVAGRTPPNLWPGNPTDEEVRLTILDHLDQLSVHLAAAQEEQDDEEARALLGSIQQELTGHVRALRNP*
Ga0070766_104698801	3300005921	Soil	SPIGLPKLCLLSSRTPVKGVRTSTAAPPPNDAIAALNGVLSEVIDVVQDVKQADRKVPQNHALHADLDRLFADLRNWANLLMEEDGELGVSPLGSMPSSAGRTPPNLWPTTPTDEEVRRTVLDLLERFAQHVSSALAEQDDDSARDVLATIQRDLTSHLRVFSEA*
Ga0075017_1002647161	3300006059	Watersheds	VKGARTSTPQPPPGDAIAALNGVLSEILDVVQDVKQAYRKVSQNDELHTQLDRLFEDIRRWASLLLAEDEELGSSPLGSMPSTAGRTPPNLWPGTPTDEEVRRTIVEHLVQLSGHLSAAQDGQDDDGARELLGDIRQELMSHVRALSEP*
Ga0075017_1005061711	3300006059	Watersheds	QDVKQAYRKVSQNHELHTQLDLLFEDIRRWASLLLAEDDELGASPLGSMPSAAGRTPPNLWPGTPTDEEVRRTILGHLEQLSIHLSAAQEDQDDVGARALLGSIRQELMSHVRALSEP*
Ga0075019_107067271	3300006086	Watersheds	VVQDVKQAYRKVSQNHELHTQLDRLFEDIRRWASLLLAEDEELGSSPLGSMPSAAGRTPPNLWPGTPTDEEVRRTILGHLEQLSIHLSAAQEDQDDVGARALLGSIRQELMSHVRALSEA
Ga0075015_1003226971	3300006102	Watersheds	VVQDVKQAYRKVSQNHELHTQLDRLFEDIRRWASLLLAEDEELGSSPLGSMPSAAGRTPANLWPGTPTDEEVRRTILGHLEQLSIHLSAAQVDQDDVGARALLGSIRQELMSHVRALSEP
Ga0075015_1006639592	3300006102	Watersheds	VKGARTSTPQPPSGDAIAALNGVLSEVLDVVQDVKQAYRKVSQNHELHAQLDRLFEDIRKWASLLLAEDEELGSSPLGSMPSAAGRTPPNLWPGTPTDEEVRRTIVEHLEQLSGHLSVAQEGQDDDGARELLGDIRQELMSHV
Ga0075030_1001114812	3300006162	Watersheds	VVQDVKQAYRKVSQNHELHTQLDRLFEDIRRWASLLLAEDEELGSSPLGSMPSAAGRTPPNLWPGTPTDEEVRRTILGHLEQLSIHLSAAQEGQDDAGARALVGSIRQELMSHVRALSEP
Ga0075014_1002787092	3300006174	Watersheds	VVQDVKQAYRKVSQNHELHTQLDQLFEDIRRWASLLLAEDEELGSSPLGSMPSAAGRTPANLWPGTPTDEEVRRTILGHLEQLSIHLSAAQENQDDVGARDLLESIRQELMSHVRALSEP
Ga0073928_105044971	3300006893	Iron-Sulfur Acid Spring	VKGARTSTDTPTPHDAIAALNGVLSEVIDVVQEVKQAYRKVPQSHEMHGKLDRLFEDLRTWASVLMAEDEQLGASPLGNIPTVAGRTPPNLWPGDPTDEDVRRTILVHLDQLSAHLSAAQAEQDDEGARVLLGKIQQELMSHVSALSDP*
Ga0116106_12971501	3300009645	Peatland	NGVLSEVIDVVQDVKQAYRKVPYSHEMHGELDRLFEDLRSWASLLMEEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDDEVRRTILDHLDQLSAHLKAAQGEQDDEDAQALLDKIQQELMSHVRTMHDLCT*
Ga0116135_11727212	3300009665	Peatland	MLTTPPPSVLHERDLRFTDMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWAGLLMEEDEKLGASPLGNMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLIAAQAEQDDEDARALLDNIHQELTGHVRTMHEH*
Ga0116216_105445581	3300009698	Peatlands Soil	MAALNRVLSDVLDVVQDVKQAHRKVPQNHELHAQLDRLFEDLRRWANLLMEEDVELGVSPLASMPSVAGRTPPNLWPGTPTDEEVRREIVDHLHRLEAHLSAALAAQDDDGARAVLGEVEQELNAHVRALSDT*
Ga0136449_1001380324	3300010379	Peatlands Soil	MAALNRVLSDVLDVVQDVKQAHRKVPQNHELHAQLDRLFEDLRRWANLLMEEDVELGVSPLASMPSVAGRTPPNLWPGTPTDEEVRREIVDHLHRLEAHLSAALAAQDDDGARAVLGEVEQELKAHVRALSDT*
Ga0136449_1036365041	3300010379	Peatlands Soil	VKGGRTSTDTPHDAIAALNGVLSEVIDVVQDVKQADRKVPRNHEMHGELDSLFEDLRTWASLLMAENEQLGSSPLGSIPSVAGRTPPNLWPGNPTDEEVRRTILVHLDQLSVHLAAAQGEQDDEGAQAL
Ga0181538_102172072	3300014162	Bog	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYSHEMHGELDRLFEGLRSWASLLMEEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDDEVRRTILDHLDQLSAHLKAAQGEQDDEDAQALLDKIQQELMSHVRTMHDLCT*
Ga0181523_101432392	3300014165	Bog	LSEVLDLVQDVKQAYRKVPQSHELHTQLDRLFEDLRSWASLLMVEDEELGTSPLGRIPTVAGRTPINLWPRTPSDEEVRRTVLDHLDRLAVHLAVAEEDQDDEGARVLLGNIRQALMSHVRTLSDL*
Ga0181531_100037982	3300014169	Bog	VPPDHAIDALNGVLSEVIDVVQDVKQAYRKVPYSHAMHGELDRLFQDLRNWAGLLMAEDEQLGASPLGSMVSVAGRIPPNLWPGSPTDEEVRRTILDHLNQLSAHLMTAQGEQNDEDARGLLGRIEQELMGHVRTMQEL*
Ga0181526_106271851	3300014200	Bog	LSEVLDLVQDVKQAYRKVPQSHELHTQLDRLFEDLRSWASLLMVEDEELGTSPLGRIPTVAGRTPINLWPGTPSDEEVRRTVLDHLDRLSVHLAVAEEDQDDEGARVLLGNIRQELMSHVRTLSDL*
Ga0181537_106858721	3300014201	Bog	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHAMHGELDRLFDDLRSWASLLMEEDEKLGASALGNLVSVAGRTPPNLWPGSPTDEEVRRTILELLDQLSAHVTAAQEEQDDEDARALLGNIRQELTSHVRTMHELSV*
Ga0182018_100054089	3300014489	Palsa	LSEVLDVVQDVKQAYRKVPPQNHELHAQLDRLFEDLRSWASLLMLEDEELGTSPLGSIPSVAGRTPLNLWPGNPTDEEVRRTILDHLEGLSVHLAAAQEDQDDEGARALMRNIQQELMSHVRTLSDS*
Ga0182018_100412981	3300014489	Palsa	MKGAHTSTNPSPPCDSTAAVNAALSEIIDLVADVKQAARNVPRSHELHEELDKLLGDLKIWASLLVAEDDQLGSSALGSIATVVGRTPVNLWPGDPTDEEVRRTILDHVDRLSVHLMAARGEQDDEGAGALMESIQQQLVCHIRTLSEP*
Ga0182018_103195281	3300014489	Palsa	MPPDNAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRIPPNLWPGSPTDEEVRRTILVHLDQLSAHLTTARGEQDDEDARALLGNIQQELMSHVRTMHELSI*
Ga0182016_100879783	3300014493	Bog	VPPDDAIDALNGVLSEVIDVVQDVKQASRKVPYTHEMHGELDRLFQDLRSWASLLMAEDEQLGASPLGSMVSVAGRVPPNLWPGSPTDEEVRRTILDHLDQLSVHLRTAQGEQDDEDARALLGRIEQELTGHVRTMQEL*
Ga0182016_102378042	3300014493	Bog	MPSEKSPPDQAITALIAVLSEVIDVVQDVKQASRKVPNSNVLHVELNRLFEDLRTWAGLLMTEDEQLGASPLGRMPSVAGRTPTNLWPGDPTDEEVRRTILEHLEQLSAHVLAAQRDQNDEGARVLLGNIRQELMSHVAALRDR*
Ga0182015_100847572	3300014495	Palsa	MPPNDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWASLLMEEDEKLGASARVNLVSVAGRVPPNLWPGSPTDEEVRRTILEHLDQLSAHVTAAQGEQDDEDARALLENIQQELMSHVRTMHELSI*
Ga0182015_101726571	3300014495	Palsa	MPPDNAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRIPPNLWPGSPTDEEVRRTILVHLDQLSAHLTTARGEQDDEDARLLLDKIQQELMSHVRTMHELSI*
Ga0182012_102298472	3300014499	Bog	LNGVLSEVIDVVQDVKQAYRKVPYSHAMHGELDRLFQDLRNWAGLLMAEDEQLGASPLGSMVSVAGRIPPNLWPGSPTDEEVRRTILDHLNQLSAHLMTAQGEQNDEDARGLLGRIEQELMGHVRTMQEL*
Ga0182012_106676421	3300014499	Bog	MPSEKSPPDQAITALIAVLSEVIDVVQDVKQASRKVPNSNVLHVELNRLFEDLRTWAGLLMTEDEQLGASPLGRMPSVAGRTPTNLWPGDPTDEEVRRTILEHLEQLSAHVLAAQRDQNDEGARVLLGN
Ga0182024_102036054	3300014501	Permafrost	VLSEVIDLVQDVKQAERKVPHSHEMHGELDKLLEDLKSWAVRLVTEDEQLGLSPLGKIPSVAGRTPLNLWPGSTTDDEVRRTLLDYLRQLSGHLAAAQAEQTDQGARALLGDIQQELMSHIRTLTGL*
Ga0182024_107497102	3300014501	Permafrost	MPSDDAIVALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMISVAGRVPPNLWPGSPTDEEVRRTILDHLDQLSAHVTAAQGEQDDEDARALLDNIQHELMSHVRSMHELSL*
Ga0182024_108453911	3300014501	Permafrost	VPSSSTDTAPYDAIAAFNGTLSEIIDVVAEVKQANRKVPRDHELHSQLDELFEDLRTWANLLMAEGDELGSSPLGSIPSVAGRVPLNLWPGDPTDNEVLQTIRDHVSRLSVRVAGARGEQVDEDARALLESIQRRLMTHVRTFSGT*
Ga0182024_109195351	3300014501	Permafrost	MPPDNAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRIPPNLWPGSPTDEEVRRTILVHLDQLSAHLTAARGEQDDEDARLLLDKIQQELTSHVRTMHELSI*
Ga0182024_111099042	3300014501	Permafrost	LVADVKQAARNVPRNHELHEELDKLLEDLKIWASLLVAEDDQLGSSALGSIATVAGRTPVNLWPGNPTDEEVRRTILDHVDRLSVHLMAARGGQDDEGAGALMERIQQKLVCHIRTLSEP
Ga0181536_102839522	3300014638	Bog	LNGVLSEVIDVVQDVKQAYRKVPYSHEMHGELDRLFEGLRSWASLLMEEDEKLGASPLGNMVSVAGRIPPNLWPGSPSDEEVRRTILDHLDQLSAHLKAAQGEQDDEDAWALLDKIQQELMSHVRTMHDLCT*
Ga0181522_106254891	3300014657	Bog	TTPPPSVLHERDLRFTDMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWAGLLMEEDEKLGASPLGNMVSVAGRIPSNLWPGTPTDEEVRRTILDHLDRLSAHLIAAQGEQDDEDARALLDNIHQELTGHVQTMHEH*
Ga0181519_105915391	3300014658	Bog	VPPDHAIDALNGVLSEVIDVVQDVKQAYRKVPYSHAMHGELDRLFQDLRNWAGLLMAEDEQLGASPLGSMVSVAGRIPPNLWPGSPTDEEVRRTILDHLNQLSAHLMTAQGEQNDEDARGLLGRIEQELMGHVRT
Ga0182030_100013285	3300014838	Bog	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRGWATLLMEEDEKLGASALGSMVSVAGRIPANLWPGSPTDEEVRRTILDHLDQLSAHLITARGEQDDEDARLLLDNIQQELMSHVRTMQELSV*
Ga0182030_100924582	3300014838	Bog	VKEARTSTDTPSPDQAIAAFNAVLSEVIDVVQDVKQASRKVPYSQEMHRELDRLFQDLRTWASLLMAEDARLGASPLENMPSVAGRIPPNLWPGDPTDEEVRRAILDHLDQLSEHLMAAQGEQDDEDTRALLGNVHQELMGHVRSMNEL*
Ga0182027_1001003314	3300014839	Fen	MSTNTSPSHDAIAALNGALSEVIDAIMVAVQATRKVPRNHKLHGELDELFAAMRTWASLLVAEDEQLGASPLGSILSFAGRTPPNLWPGNPTDEEVRRTILDHMKGLSAHLVAAQREQDDEGARGLLESIQRELVSHVRKLSDL*
Ga0187880_13545651	3300018016	Peatland	MTDNLHTLSPLVLRERGLRFTDMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYSHEMHGELDRLFEVLRSWASLLMEEDEKLGASPLGNMVSVAGRIPPNLWPGSPSDEEVRRTILDHLDQLSAHLKAAQGEQDDEDARALLDKIQQELMSHVRTMHDLCT
Ga0187885_105306281	3300018025	Peatland	MPPDDAIDALNGVLSEVIDVVQDVKQADRKVPPNHELHGELDRLFENLRTWASLLMAEDEHLGASPLGSMPSVAGRTPPNLWPGNPTDEEVRRTILEHLDLLSVHLAAAQGEQDDEDA
Ga0187867_100484912	3300018033	Peatland	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHAELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRIPPNLWPGSPTDEEVRRTILVHLDQLSAHLTAARAVQDDEDARLLLDDIQQELTSHVRTMQELSI
Ga0187875_104062521	3300018035	Peatland	MTDNLHTLSPLVLRERGLRFTDMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYSHEMHGELDRLFEDLRSWASLLMEEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDDEVRRTILDHLDQLSAHLKAAQGEQDDEDAQALLDKIQQELMSHVRTMHDLCT
Ga0187871_103246311	3300018042	Peatland	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHAELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLTTARGEQDDEDARVLLDNIQQELMSHVRTMHELSI
Ga0187887_102510091	3300018043	Peatland	MPPDNAIDGLNRVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMISVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLKAAQGEQDDEDAQALLDKIQQELMSHVRTMHELSI
Ga0187890_105410011	3300018044	Peatland	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHAELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRIPPNLWPGSPTDEEVRRTILVHLDQLSAHLTAARAVQDDEDARLLLDDIQQELTSHV
Ga0187859_106274532	3300018047	Peatland	ALNGVLSEVIDVVQDVKQAYRKVPYTHEMHAELDRLFEDLRSWASLLMEEDEKLGASALGNMISVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLTTARGEQDDEDARVLLDNIQQELMSHVRTMHDLCT
Ga0182025_13200412	3300019786	Permafrost	VLSEVIDLVQDVKQAERKVPHSHEMHGELDKLLEDLKSWAVRLVTEDEQLGLSPLGKIPSVAGRTPLNLWPGSTTDDEVRRTLLDYLRQLSGHLAAAQAEQTDQGARALLGDIQQELMSHIRTLTGL
Ga0210383_104025712	3300021407	Soil	LTDTSPPHDPIAAFNGVLSEVIDVVADLKQADRKVPRNHELHRELDRLFEDLKTWANLLMAEDDELGSSPLASIPSVAGRTPVNLWPGDPTDEEVRRTILDHLNRLSLHLAAARGEQDDDGARALLESFQEALMTHERALGDL
Ga0212123_103662012	3300022557	Iron-Sulfur Acid Spring	VKGARTSTDTPTPHDAIAALNGVLSEVIDVVQEVKQAYRKVPQSHEMHGKLDRLFEDLRTWASVLMAEDEQLGASPLGNIPTVAGRTPPNLWPGDPTDEDVRRTILVHLDQLSAHLSAAQAEQDDEGARVLLGKIQQELMSHVSALSDP
Ga0224558_10372613	3300023090	Soil	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYSHEMHGELDRLFEDLRSWASLLMEEDEKLGSSPLGNMVSVAGRIPPNLWPGSPTDDEVRRTILDHLDQLSAHLKAAQGEQADEDARALLDKIQQELRSHVRTMHDLCT
Ga0224557_11687551	3300023101	Soil	MLLIAVTSRYFAKEARTSTDTPPPDQAIASLNAVLSEVIDVVQDVKQASRKVPYSHEMYGALDRLFQDLRTWASLLMAEDAKLGASPLENMPSVAGRTPPNLWPGDPTDEEVRRAILDHLDQLSEHLMAAQGEQDDEDARALLGKIHRELMSHVRTMHEL
Ga0209420_10239533	3300027648	Forest Soil	VVQEVKQAYRKVPQNHEIHGELDRLFEDLKTWASVLMAEDEQLGTTALGRIPTAAGRTPPNLWPGNPTDEEVRRTILSHLDLLSVHVTAAHGEQDDEGARVLLGNIQQELMTHVRTLNAL
Ga0209908_100253602	3300027745	Thawing Permafrost	VKGDRTSTSPPPPHDAIAALNGVLSEVLDVVQDVKQAYRKVPPQNHELHAQLDRLFEDLRSWASLLMLEDEELGTSPLGSIPSVAGRTPLNLWPGNPTDEEVRRTILDHLEGLSVHLAAAQEDQDDEGARALMRNIQQELMSHVRTLSDS
Ga0209624_100306874	3300027895	Forest Soil	VVARFFVKETRTSTDASPPDHAIAALNGVLSEVIDVVQDVKQADRKVPYGDELHGELDGLFEDLRSWASLLMAEDEQLGTSPLGYVPSVAGRTPPNLWPGDPTDEEIRRAILDHLDRLSAHLVAAQEEQEDEDARAVLGTIRQELASRVRALRDG
Ga0302234_104911061	3300028773	Palsa	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELERLFEDLRSWASQLMAEDEKLGASALGNMVSVAGRLPPNLWPGNPTDEEVRRTILDHLDQLSAHLMTAQGEQDDEDARALLGKIQEELMSHVRTMHE
Ga0302232_105954101	3300028789	Palsa	VKGPPTSHNPSPQHDAIAALNGVLSEVIDLVADVKQADRKVPRNHELHGQLDKLFADLRTWAGLLMAEDTELGSSALGAIPSAAGRTPVNLWPGNPTDEEVRRTILEHMDRLSVHLATAQAEQDDEGAQELLGSITQELASHVAALRAL
Ga0302154_102768471	3300028882	Bog	VLPDHAIDALNGVLSEVIDVVQDVKQAYRKVPYSHAMHGELDRLFQDLRNWAGLLMAEDEQLGASPLGSMVSVAGRIPPNLWPGSPTDEEVRRTILDHLNQLSAHLMTAQGEQNDEDARGLLGRIEQELMGHVRTMQEL
Ga0308309_110402851	3300028906	Soil	VKGARTSTDTPTPHDAIAALNGVLSEVIDVVQEVKQAYRKVPQSHEMHGKLDRLFEDLRTWASVLMAEDEQLGASPLGNIPTVAGRTPPNLWPGDPTDEDVRRTILVHLDQLSAHLSAAQAEQDDEGARVLLGKIQQELMSDVRALSDP
Ga0308309_118822571	3300028906	Soil	LNDVLDVVLDVKQANRKVPISHEMHRALQALFDDLKSWAGLLMAEDEKLGTSALGSVPSAAGRTPPNLWPGSPTDEEVRSVLLPYLEQLSAHVVAADAEQDDEEA
Ga0311369_113187692	3300029910	Palsa	NGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMISVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLTTARGEQDDEDARVLLDNIQQELMSHVRTMHELSI
Ga0311361_112031141	3300029911	Bog	PSEKSPPDQAITALIAVLSEVIDVVQDVKQASRKVPNSNVLHVELNRLFEDLRTWAGLLMTEDEQLGASPLGRMPSVAGRTPTNLWPGDPTDEEVRRTILEHLEQLSAHVLAAQRDQNDEGARVLLGNIRQELMSHVAALRDR
Ga0311340_107195732	3300029943	Palsa	HTTISPRYFAKEARTSTDTPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGALDRLFEDLRTWASLLMAEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLVTAQGEQDDEDARVLLGKIQQELMSHVRTMHDL
Ga0311371_107844261	3300029951	Palsa	KQAYRKVPYTHEMHGELDRLFEDLRRWAGLLMAEDEKLGASPLGSMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLMAAQGEQDDEDARALLDNIQQELTSHVRTMHEH
Ga0311339_100780785	3300029999	Palsa	VHSGDSLPILHTTISRRYFAKEARTSTDTPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGALDRLFEDLRTWASLLMAEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLVTAQGEQDDEDARVLLGKIQQELMSHVRTMHDL
Ga0311339_100965773	3300029999	Palsa	LVADVKQADRKVPRNHELHGQLDKLFADLRTWAGLLMAEDTELGSSALGAIPSAAGRTPVNLWPGNPTDEEVRRTILEHMDRLSVHLATAQAEQDDEGAQELLGSITQELASHVAALRAL
Ga0311339_101679702	3300029999	Palsa	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMVSVAGRIPPNLWPGSPTDEEVRRTILVHLDQLSAHLTTARGEQDDEDARLLLDKIQQELMSHVRTMHELSI
Ga0311339_104000012	3300029999	Palsa	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRIWASQLMAEDEKLGASALGNMVSVAGRLPPNLWPGNPTDEEVRRTILDHLDQLSAHLMTAQGEQDDEDARALLGKIQEELMSHVRTMHEL
Ga0311339_104344312	3300029999	Palsa	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWAGLLMAEDEKLGASPLGSMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLMAAQGEQDDEDARALLDNIQQELTSHVRTMHEH
Ga0311338_102535812	3300030007	Palsa	VKGPPTSTNPSPPHDAIAALNGVLSEVIDLVLDVKQADRKVPRNHELHGQLDKLFEDLRNWASLVMAEDAQLGASPLGSIPSAAGRTPQNLWSGDPTDEEVRRTILDHMDRLSVHVVAAQREQDDADARALLGSIQEELTSHVRTLRTL
Ga0311338_107522552	3300030007	Palsa	MPPNDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWASLLMEEDEKLGASALGNLVSVAGRVPPNLWPGSPTDEEVRRTILEHLDQLSAHVTAAQGEQDDEDARALLENIQQELMSHVRTMHELSI
Ga0311338_116118821	3300030007	Palsa	PRYFAKEARTSTDTPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGALDRLFEDLRTWASLLMAEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLVTAQGEQDDEDARVLLGKIQQELMSHVRTMHDL
Ga0311353_106008802	3300030399	Palsa	PDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASQLMAEDEKLGASALGNMVSVAGRLPPNLWPGNPTDEEVRRTILDHLDQLSAHLMTAQGEQDDEDARALLGKIQEELMSHVRTMHEL
Ga0311370_106569362	3300030503	Palsa	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMISVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLTTARGEQDDEDARVLLDNIQQELMSHVRTMHELSI
Ga0311370_106605121	3300030503	Palsa	AKEARTSTDTPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGALDRLFEDLRTWASLLMAEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLVTAQGEQDDEDARVLLGKIQQELMSHVRTMHDL
Ga0311372_120646881	3300030520	Palsa	VQDVKQAYRKVPYTHEMHGELDRLFEDLRSWAGLLMAEDEKLGASPLGSMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLIAAQGEQDDEDARALLDTIQQELTSHVRTMHEH
Ga0311372_130376561	3300030520	Palsa	VKGPPTSHNPSPPHDAIAALNGVLSEVIDLVADVKQADRKVPRNHELHGQLDKLFADLRTWAGLLMAEDTELGSSALGAIPSAAGRTPVNLWPGNPTDEEVRRTILEHMDRLSVHLATAQAEQDDEGAQELLGSITQELASHVAALRAL
Ga0311357_109851682	3300030524	Palsa	VVQDVKQADRKVPRNHLLHGELDELIADLRVWASMLMAEDMELGTSPLGSVPSAAGRTPPNLWPGNPTDEEVRRTILDHLDHLSVHLVAAQGEQGDAGARDLLEKIQGELMSHVRALGVL
Ga0311355_108772431	3300030580	Palsa	MPPNDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWASLLMEEDEKLGASALGNLVSVAGRVPPNLWPGSPTDEEVRRTILEHLDQLSAHVTAAQGEQDDEDARALLENIQQELMSHV
Ga0311355_119098831	3300030580	Palsa	TTPSPSVLHERDLRFADMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWAGLLMAEDEKLGASPLGSMVSVAGRTPPNLWPGTPTDEEVRRTILDHLDRLSAHLMAAQGEQDDEDARALLDNIQQELTSHVRTMHEH
Ga0311356_105145461	3300030617	Palsa	ARDTTDSLRMPATPSPSVLRERRRRFSDMPPNDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWASLLMEEDEKLGASALGNLVSVAGRVPPNLWPGSPTDEEVRRTILEHLDQLSAHVTAAQGEQDDEDARALLENIQQELMSHVRTMHELSI
Ga0311356_117418901	3300030617	Palsa	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGALDRLFEDLRTWASLLMAEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLVTAQGEQDDEDARVLLGKIQQELMSHVRT
Ga0311354_114401341	3300030618	Palsa	TLRTTDSLPMLTTPPPSVLHERDLRFTDMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWAGLLMAEDEKLGASPLGSMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLMAAQGEQDDEDARALLDNIQQELTSHVRTMHEH
Ga0311345_109985121	3300030688	Bog	VVQDVKQASRKVPNSNVLHVELNRLFEDLRTWAGLLMTEDEQLGASPLGRMPSVAGRTPTNLWPGDPTDEEVRRTILEHLEQLSAHVLAAQRDQNDEGARVLLGNIRQELMSHVAALRDR
Ga0265753_11511271	3300030862	Soil	ALNGVLSELIDVVQDVKQADRKVPPNHALHQELDGLFADLRTWASLLMAEDEHLGVSPLGTVPSVAGRTPPNLWPGNPTDEEVRRTVLDHLDQLSMHVAAAQAEQDDEDARALLGRVQRELLIHVRALGAL
Ga0302314_105213931	3300030906	Palsa	VQDVKQAYRKVPYTHEMHGELDRLFEDLRSWAGLLMAEDEKLGASPLGSMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLMAAQGEQDDEDARALLDNIQQELTSHVRTMHEH
Ga0302314_113570631	3300030906	Palsa	RLVRPMSREGSRPLLGEAHANSARRSTIRSWWQARDTTDSLRMPATPSPSVLRERRRRFSDMPPNDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWASLLMEEDEKLGASALGNLVSVAGRVPPNLWPGSPTDEEVRRTILEHLDQLSAHVTAAQGEQDDEDARALLENIQQELMSHVRTMHELSI
Ga0302308_108068401	3300031027	Palsa	RFLEPPVRALRATDSLPMLTTPSPSVLHERDLRFADMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWAGLLMAEDEKLGASPLGSMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDQLSAHLVTAQGEQDDEDARVLLGKIQQELMSHVRTMH
Ga0302180_101736402	3300031028	Palsa	VHSGDSLPILHTTISRRYFAKEARTSTDTPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGALDRLFEDLRTWASLLMAEDEKLGASPLGNMVSVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLVTAQGEQDDEDARVLLGKIQQELMS
Ga0302307_107102642	3300031233	Palsa	VKGPPTSTNPSPPHDAIAALNGVLSEVIDLVLDVKQADRKVPRNHELHGQLDKLFEDLRNWASLVMAEDAQLGASPLGSIPSAAGRTPQNLWSGDPTDEEVRRTILDHMDRLSVHVVAAQREQ
Ga0302325_102118414	3300031234	Palsa	LFEKGARTSTGTPSHDPIAALNGVLSEVIDVVQDVKQANRKVQQSQELHRELDRLFENLRTWASLLMAEDEQLGSSPLGSIPSVAGRTPLNLWPGNPTEQEVRQTVLDHIDQLSVHLAAAQAEQDDPEAWALLGSIRQELTSHVRALSDL
Ga0302325_108671201	3300031234	Palsa	MPPDNAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRSWASLLMEEDEKLGASALGNMISVAGRIPPNLWPGSPTDEEVRRTILDHLDQLSAHLTTARGEQDDEDARVLLDNIQQELMSHVRTMHELSI
Ga0302325_109672662	3300031234	Palsa	VLHERDLRFTDMPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEIHGELDRLFEDLRSWAGLLMEEDEKLGASPLGNMVSVAGRIPPNLWPGTPTDEEVRRTILDHLDRLSAHLIAAQAEQGDEDARALLDNIHQELTGHVRTMHEH
Ga0302325_124069631	3300031234	Palsa	KGPPTSTNTSPSHDAIAALNGALSDVIDVIADVKQATRKVPRNHELHGELDELFAAMRTWASLLVAEDEQLGASPLGSVQSFAGRTPPNLWPGNPSDEEVRRTILDHMKGLSAHLVAAQREQDDEGARGLLESIQRELVSHVRKLSDL
Ga0302320_103700013	3300031524	Bog	VLPDHAIDALNGVLSEVIDVVQDVKQAYRKVPYSHAMHGELDRLFQDLRNWAGLLMAEDEQLGASPLGSMVSVAGRIPPNLWPGSPTDEEVRRTILDHLSQLSAHLMTAQGEQNDEDARGLLGRIEQELMGHVRTMQEL
Ga0310686_1122839443	3300031708	Soil	MPPDDAIVALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFDDLRSWASLLMEEDDKLGASALGNLVSVAGRTPPNLWPGSPTDEEVRRTILEHLDHLSAHVTAARREQVDEDARALLGNIEQELTGHMRTMRELSI
Ga0310686_1132323191	3300031708	Soil	NAVLSEVIDVVQDVKQAYRKVPYTHEMNGELDRLFEDLRTWASVLMAEDEKLGVSPLGSMISVAGRIPPNLWPGSPSDEEVRRTILDHLDQLSAHLMTAQGEQDDEEARALLGKIQRELTSHVRTMHELRT
Ga0302319_105933382	3300031788	Bog	VLPDHAIDALNGVLSEVIDVVQDVKQAYRKVPYSHAMHGELDRLFQDLKNWASLLMAEDEQLGASPLGSMVSVAGRIPPNLWPGSPTDEEVRRTILDHLNQLSAHLMTAQGEQNDEDARGLLGRIEQELMGHVRTMQEL
Ga0311301_114638711	3300032160	Peatlands Soil	MAALNRVLSDVLDVVQDVKQAHRKVPQNHELHAQLDRLFEDLRRWANLLMEEDVELGVSPLASMPSVAGRTPPNLWPGTPTDEEVRREIVDHLHRLEAHLSAALAAQDDDGARAVLGEVEQELNAHVRALSDT
Ga0334790_141145_2_382	3300033887	Soil	MSTNTSPSHDAIAALNGALSEVIDAIMVAVQATRKVPRNHKLHGELDELFAAMRTWASLLVAEDEQLGASPLGSILSFAGRTPPNLWPGNPTDEEVRRTILDHMKGLSAHLVAAQREQDDEGARGLL
Ga0370492_0279356_327_677	3300034282	Untreated Peat Soil	MPPDDAIDALNGVLSEVIDVVQDVKQAYRKVPYTHEMHGELDRLFEDLRGWATLLMEEDEKLGASALGSMVSVAGRIPANLWPGSPTDEEVRRTILDHLDQLSAHLITARGEQDDED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086032

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences