NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F086026

Metagenome Family F086026

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086026
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 100 residues
Representative Sequence MNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Number of Associated Samples 85
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 49.55 %
% of genes near scaffold ends (potentially truncated) 27.93 %
% of genes from short scaffolds (< 2000 bps) 86.49 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.658 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(20.721 % of family members)
Environment Ontology (ENVO) Unclassified
(31.532 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.559 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164
1JGIcombinedJ51221_100723092
2Ga0066395_107691841
3Ga0066388_1010668702
4Ga0066388_1071598311
5Ga0070714_1002307993
6Ga0070713_1005999062
7Ga0070713_1014305602
8Ga0070713_1014786272
9Ga0070708_1020379101
10Ga0070741_111819612
11Ga0070735_102024672
12Ga0066699_109268691
13Ga0066703_107509681
14Ga0066706_103212952
15Ga0066903_1000741106
16Ga0066903_1006296153
17Ga0066903_1021332802
18Ga0066903_1027984842
19Ga0066696_106318591
20Ga0066652_1007605271
21Ga0075029_1007539531
22Ga0075026_1001455063
23Ga0075014_1005705501
24Ga0079222_100492613
25Ga0079222_117179771
26Ga0066660_104291952
27Ga0079221_100437682
28Ga0075425_1015081002
29Ga0073928_102559731
30Ga0073928_107249782
31Ga0099828_113763982
32Ga0099827_103194742
33Ga0126374_100737142
34Ga0126384_100561661
35Ga0126373_100223358
36Ga0126370_103021372
37Ga0126376_100327495
38Ga0126376_112018261
39Ga0126376_113673591
40Ga0126378_102741772
41Ga0126378_102917022
42Ga0126378_103314162
43Ga0126378_114240391
44Ga0126379_109657052
45Ga0126379_127965971
46Ga0126379_137764891
47Ga0126381_1001112413
48Ga0126381_1005143242
49Ga0126381_1005393982
50Ga0126381_1014841692
51Ga0126381_1045775112
52Ga0137392_110394691
53Ga0137393_103646811
54Ga0120139_10303502
55Ga0137389_105137902
56Ga0137364_104788391
57Ga0137381_102403711
58Ga0137376_103921332
59Ga0137379_100893264
60Ga0137386_102894891
61Ga0137360_107222162
62Ga0137361_106848442
63Ga0126375_100065583
64Ga0182041_101321263
65Ga0182033_102206483
66Ga0182040_100822272
67Ga0182039_101543432
68Ga0187820_10518022
69Ga0187825_101256692
70Ga0187825_101439761
71Ga0187821_103348601
72Ga0187779_104758862
73Ga0187823_101909001
74Ga0187765_103489252
75Ga0187765_111629451
76Ga0066669_122302741
77Ga0193751_10117095
78Ga0193751_10753262
79Ga0193749_10105972
80Ga0210403_100522821
81Ga0210399_100330523
82Ga0126371_100922364
83Ga0126371_104554052
84Ga0126371_117822552
85Ga0207700_117925351
86Ga0209214_10101182
87Ga0209523_11263632
88Ga0209117_10446592
89Ga0209178_10870122
90Ga0209074_101137781
91Ga0209074_102906142
92Ga0209590_107717411
93Ga0209168_104284821
94Ga0170824_1287121401
95Ga0170820_176988773
96Ga0318541_102362872
97Ga0318555_107564021
98Ga0306917_110082822
99Ga0318493_106676801
100Ga0306918_102427352
101Ga0318521_108213371
102Ga0307478_108097422
103Ga0306919_100174063
104Ga0318520_107329532
105Ga0306923_108395992
106Ga0310909_101503602
107Ga0306922_100144578
108Ga0310911_103299331
109Ga0318545_101066162
110Ga0318545_101833291
111Ga0318510_103833261
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 19.17%    β-sheet: 12.50%    Coil/Unstructured: 68.33%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKKSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
57.7%42.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Surface Soil
Agricultural Soil
Permafrost
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Tropical Peatland
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Populus Rhizosphere
4.5%11.7%20.7%5.4%5.4%10.8%8.1%6.3%3.6%4.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1007230923300003505Forest SoilMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK*
Ga0066395_1076918413300004633Tropical Forest SoilMNMISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACMDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK*
Ga0066388_10106687023300005332Tropical Forest SoilMSTIRKFMVAAAAAAIATALLPSSSFAKAHNAKELPCSFGQACTDKPDKISQATGWVTTKRCSYESHKLYADLFPCYRPGGACPVAKCKSKK*
Ga0066388_10715983113300005332Tropical Forest SoilMDTTRKFIVVAAAAAVAISFSPSLAFAKKAHTAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPSYGPGGACPAATCKSKK*
Ga0070714_10023079933300005435Agricultural SoilMKMIRRFVVAAAAAAIATVLVPASSFAKTHAAKERPCSFGQACTVKPTGVSKTTGWVTTQRCSYESHKMYADLFPCYRPGGACPAATCKGKK*
Ga0070713_10059990623300005436Corn, Switchgrass And Miscanthus RhizosphereMKTIRKLIVAAAAAAIATALLPPSSFAKTHKAKERPCSFGQTCTVKPAGVSKATGWVTTQRCSYESHKMYADLFPCYQPGGACPVATCKSKK*
Ga0070713_10143056023300005436Corn, Switchgrass And Miscanthus RhizosphereMDTIRKFIVAVAAAAVAISFLPSLAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMFQDVFPCFRPSGACPVATCKPKK*
Ga0070713_10147862723300005436Corn, Switchgrass And Miscanthus RhizosphereMLKSSLSGGVPASCEYGQGLREGAKEPMNMIRKFILVAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE*
Ga0070708_10203791013300005445Corn, Switchgrass And Miscanthus RhizosphereMVRAFARGVKEPMNMIRKFILAAAATAVVISFLAPSSFAKKSHKAKAPPCSVGQACMDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK*
Ga0070741_1118196123300005529Surface SoilMIRKVVLAAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAV
Ga0070735_1020246723300005534Surface SoilMIRKVVLAAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAVCKSKKK*
Ga0066699_1092686913300005561SoilMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0066703_1075096813300005568SoilIFPPRPMLKSSLRGGVPSCEYGQGLREGVKEPMNMVRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGTCPAATCKSKK*
Ga0066706_1032129523300005598SoilMNMIRKSVVAAIADSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCPAATCKAKK*
Ga0066903_10007411063300005764Tropical Forest SoilMSTIRKFMVAAAAAAIATALLPSSSFAKAHNAKELPCSFGQACTDKPDKISQATGWVTTKRCSYESHKLYADLFPCYRPGGACPVATCKSKK*
Ga0066903_10062961533300005764Tropical Forest SoilMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWVTVKRCSYDGKMYQDVFPCYTPGGMCPAATCKSKKKK*
Ga0066903_10213328023300005764Tropical Forest SoilMIRKLIVTAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPGGVSKFTGWVTVKRCSYEGKMYQDAFPCYAPSGTCPAATCKSKKK*
Ga0066903_10279848423300005764Tropical Forest SoilMIRKSILAGAVVAVALSLSGPSAFAKTSHKAKEPPCNFGQACTNKPDKVSQATGWVTTKRCSYESHKMNADVFPCYQPGGACPAATCKANK*
Ga0066696_1063185913300006032SoilMNMIRKSVVAAIAVAVATSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCTAATCKAKK*
Ga0066652_10076052713300006046SoilMNMIRKSVVAAIAVAVATSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCPAA
Ga0075029_10075395313300006052WatershedsGKEPMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK*
Ga0075026_10014550633300006057WatershedsMDTIRKLIVAAAATAVAASFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK*
Ga0075014_10057055013300006174WatershedsMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSQFTGWVTVKRCTYQGKMYQDVFPCYRPGGMCPAATCKSKKSKK*
Ga0079222_1004926133300006755Agricultural SoilMNMIRKLVVAAAAVAVAISLLPASSLAKSHRAKAPACSFGQACIDKPEKVSQATGWSTVKRCSSESHKMYQDVFPCYRPGGMCPAAVCKSKKK*
Ga0079222_1171797713300006755Agricultural SoilVAVAAAAVAISFLPSLAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK*
Ga0066660_1042919523300006800SoilMLKSSLRGGVPSCEYGQGLREGVKEPMNMVRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0079221_1004376823300006804Agricultural SoilMDTIRKSIVAATAAAVAISFLPSPAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK*
Ga0075425_10150810023300006854Populus RhizosphereREGGKETMDTIRKSIVAATAAAVAISFLPSLAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMFQDVFPCFRPSGACPVATCKPKK*
Ga0073928_1025597313300006893Iron-Sulfur Acid SpringMLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK*
Ga0073928_1072497823300006893Iron-Sulfur Acid SpringMVRAFARGVKEPMNMIRKFILAAAATAVATSFLPSSSFAKKSHKAKEPPCSMGQACTDKPDKVSKFTGWATAKRCSYEGKMYQDVFPCYKPGGMCPAATCKSKK*
Ga0099828_1137639823300009089Vadose Zone SoilMVRAFAGGKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0099827_1031947423300009090Vadose Zone SoilMLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0126374_1007371423300009792Tropical Forest SoilMLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPGGVSKFTGWVTVKRCSYEGKMYQDPFPCYTPSGTCPAATCKSKKK*
Ga0126384_1005616613300010046Tropical Forest SoilMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCIMGQACTDKPEKVSKFTGWVTVKRCSYEGKMYQDVFPCYAPGGMCPAAACKSKKK*
Ga0126373_1002233583300010048Tropical Forest SoilMIRKFVVAAAAVAFATSLLGPSAFAKKSHKAKEPPCSFGQACTDKPSKISQSTGWVTTKRCSYESHKMNADLFPCYRPGGACPAATCKAKK*
Ga0126370_1030213723300010358Tropical Forest SoilMLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYLDVFPCYTPGGMCPAATCKSKKKK*
Ga0126376_1003274953300010359Tropical Forest SoilMLKSFPERRRSGQLRTWFNAFARGVNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYLDVFPCYTPGGMCPSATCKSKKKKK*
Ga0126376_1120182613300010359Tropical Forest SoilMLKLFLSGGVPAANMVGAFAKGGLMNMIRKFIVAAVATAVATSFLPPSSFAKKSHKAKEPPCSVGQACMDKPEGASKFTGWQTTKRCGYDGKGKMYQDVFPCYAPAGMCPAAICKSKKKK
Ga0126376_1136735913300010359Tropical Forest SoilAKIVFERRHSGQLQTWSGPSRGGKKPMNMIRKFILVAAAAAVATSLLPPSSFAKKSDKAKEKPCSVGQVCMNKPDKKGWGTVMRCTYDRKMIADFSPCNVHSGMCPTAICKSKKKK*
Ga0126378_1027417723300010361Tropical Forest SoilMNLIRKCIVAAVATAVATALLPSSSFAKSHKAKEPPCNFGQACIDKPDKISKATGWSTVKRCSYESHKMYRDVFPCYRTGGACPAATCKSAKK*
Ga0126378_1029170223300010361Tropical Forest SoilMIRKSILAGAVVAVALSLSGPSAFAKTSHKAKEPPCNFGQACTNKPDKVSRATGWVTTKRCSYESHKMNADVFPCYAPGGACPAATCKAKK*
Ga0126378_1033141623300010361Tropical Forest SoilMIRKFILAAAATAVTTSFLPPSSFAKKSHKAKEPPCIMGQACTDKPEKVSKFTGWVTVKRCSYEGKMYQDVFPCYAPGGMCPAAACKSKKK*
Ga0126378_1142403913300010361Tropical Forest SoilGQLRTWFNAFARGVNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYQDVFPCYTLGGMCPAATCKSKKKK*
Ga0126379_1096570523300010366Tropical Forest SoilMLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCAWVRPVRNKPDKVSKFTGWATVKRCSYDGKMYLDVFPCYTPGGMCPAATCKSKKKK*
Ga0126379_1279659713300010366Tropical Forest SoilLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACMDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK*
Ga0126379_1377648913300010366Tropical Forest SoilPCGKVASCAFWCELVFRPRSMLKSSLSGGVPASYKHWSGFREGVNVIRKLIVTAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPGGVSKFTGWVTVKRCSYEGKMYQDAFPCYAPSGTCPAATCKSKKK*
Ga0126381_10011124133300010376Tropical Forest SoilMNMISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK*
Ga0126381_10051432423300010376Tropical Forest SoilMIRKSILAGAVVAVALSLSGPSAFAKTSHKAKEPPCNFGQACTNKPDKVSQATGWVTTKRCSYESHKMNADVFPCYAPGGACPAATCKAKK*
Ga0126381_10053939823300010376Tropical Forest SoilMLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYQDVFPCYTPGGMCPSATCKSKKKK*
Ga0126381_10148416923300010376Tropical Forest SoilMGTAVAIAIAFLPPSAFAKKSHKAKEPPCSFGQACTNKPAGVSKATGWVTTKRCSYESHKMYEDLFPCYAPGGACPAATCKAKK*
Ga0126381_10457751123300010376Tropical Forest SoilLWQPPALAVAALLLPPEAFAKASHKAKEPPCNFGQACTNKPAGVSKATGWVTTQRCSYESHKMYADLFPCYAPGGACPAAACKAKKK*
Ga0137392_1103946913300011269Vadose Zone SoilMVRAFAEGKEPMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137393_1036468113300011271Vadose Zone SoilMVRAFAGGKESMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0120139_103035023300012019PermafrostMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK*
Ga0137389_1051379023300012096Vadose Zone SoilMLKSSLSGGVPASCEHGQSLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACMDKPDKIGKFTGWATVKRCSYEGKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137364_1047883913300012198Vadose Zone SoilMVRAFAGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137381_1024037113300012207Vadose Zone SoilMVRAFAGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKLTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137376_1039213323300012208Vadose Zone SoilMNMIRKFILVAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE*
Ga0137379_1008932643300012209Vadose Zone SoilMVRAFAGGKEPMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137386_1028948913300012351Vadose Zone SoilMVRAFAGVKEPMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137360_1072221623300012361Vadose Zone SoilMLKSSLRGGVPASCEYGQGLREGVKEPTNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPGGMCPAAT
Ga0137361_1068484423300012362Vadose Zone SoilQGLREGVKEPMNMVRKFILAAAATAVATSFLPPSSFAKKSHKAKEPQCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0126375_1000655833300012948Tropical Forest SoilMLKSFPERRRSGQLRTWFNAFARGVNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYQDVFPCYTLGGMCPAATCKSKKKK*
Ga0182041_1013212633300016294SoilMNTISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0182033_1022064833300016319SoilMLKLTLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVRSGMCPT
Ga0182040_1008222723300016387SoilMISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0182039_1015434323300016422SoilMLKSSLSGGIPASCEHGQGPREGGKKPMNMIRKFILVAAATAVATSFLPPSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK
Ga0187820_105180223300017924Freshwater SedimentMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSMGQACTDKPAGVSKFTGWVTVKRCSYEGKMYQDVFPCYRPSGACPAAICKSKKKT
Ga0187825_1012566923300017930Freshwater SedimentMIRKFLLVAAAAAIATALLPPSSFAKKAHKAKEAPCSFGQACTVKPSGVSKKTGWVTTQRCSYESHKMYADLFPCYQPGGACPVAVCKSKKK
Ga0187825_1014397613300017930Freshwater SedimentMIRKVVLAAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAVCKSKKK
Ga0187821_1033486013300017936Freshwater SedimentMIRKFLLVAAAAAIATALLPPSSFAKKAHKAKEAPCSFGQACTVKPSGVSKKTGWVTTQSCSYESHKMYADLFPCYQPGGACPVAVCK
Ga0187779_1047588623300017959Tropical PeatlandMKMIRKTILMSAAVAVAIAFLPPSAFAKKSHKATEPPCNFGQACTDKPAGVSKATGWVTTKRCTYEGHKMYADLFPCYQPGGMCPAATCKAKKK
Ga0187823_1019090013300017993Freshwater SedimentMNMIRKFLLVAAAAAIATALLPPSSFAKKAHKAKEAPCSFGQACTVKPSGVSKKTGWVTTQRCSYESHKMYADLFPCYQPGGACPVAVCKSKKK
Ga0187765_1034892523300018060Tropical PeatlandMNMIRKSIFMGAVVAVAISLLPPSAFAKKSHKAKEPPCTFGQACTNKPAGVSKATGWVTTQRCSYESHKMYADLFPCYQPGGMCPAATCKAKKK
Ga0187765_1116294513300018060Tropical PeatlandHYTARPAHAKIAPVRRRSGSYECGQGLREGGNMIRKFMLVVAATAVATSFSPSSSFAKKSHKAKEPPCSVGQVCMKKPDKAGWGTVMRCTYDGKMVRDFYPCNVRSGMCPTAICKAKKK
Ga0066669_1223027413300018482Grasslands SoilMNMIRKSVVAAIADSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCPAATCKAKK
Ga0193751_101170953300019888SoilMLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Ga0193751_107532623300019888SoilMVRAFARGVKEPMNMIRKFILAAAATAVATSFLPSSSFAKKSHKAKEPPCSMGQACTDKPDKVSKFTGWATAKRCSYEGKMYQDVFPCYKPSGMCPAATCKSKK
Ga0193749_101059723300020010SoilMVRAFARGVKEPMNMIRKFILAAAATAVATSFLPSSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Ga0210403_1005228213300020580SoilAKMASERRRSGQQHGQDLREGGKEPMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK
Ga0210399_1003305233300020581SoilMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK
Ga0126371_1009223643300021560Tropical Forest SoilMIRKFVVAAAAVAFATSLLGPSAFAKKSHKAKEPPCSFGQACTDKPSKISQSTGWVTTKRCSYESHKMNADLFPCYRPGGACPAATCKAKK
Ga0126371_1045540523300021560Tropical Forest SoilSKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACMDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0126371_1178225523300021560Tropical Forest SoilSKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0207700_1179253513300025928Corn, Switchgrass And Miscanthus RhizosphereMKTIRKLIVAAAAAAIATALLPPSSFAKTHKAKERPCSFGQTCTVKPAGVSKATGWVTTQRCSYESHKMYADLFPCYQPGGACPVLARPRGRGGRGHRRGRAHR
Ga0209214_101011823300027071Forest SoilMDTIRKFIVAVAAAAVAISFLPSPAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK
Ga0209523_112636323300027548Forest SoilVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPEKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAAACKPKKSKK
Ga0209117_104465923300027645Forest SoilMNMIRKFILAAAATAVATSFLPPSSFAKKSHKTKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Ga0209178_108701223300027725Agricultural SoilMDTIRKSIVAAAAAAVAISFLPSLAFAKKAHKAKAPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK
Ga0209074_1011377813300027787Agricultural SoilMNMIRKLVVAAAAVAVAISLLPASSLAKSHRAKAPACSFGQACIDKPEKVSQATGWSTVKRCSYESHKMYQDVFPCYRPGGMCPAAVCKSKKT
Ga0209074_1029061423300027787Agricultural SoilLREGGKETMDTIRKSIVAATAAAVAISFLPSPAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK
Ga0209590_1077174113300027882Vadose Zone SoilMLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPA
Ga0209168_1042848213300027986Surface SoilAAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAVCKSKKK
Ga0170824_12871214013300031231Forest SoilMNMIRKFILTAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE
Ga0170820_1769887733300031446Forest SoilMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE
Ga0318541_1023628723300031545SoilMNMISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0318555_1075640213300031640SoilFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDQVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0306917_1100828223300031719SoilKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0318493_1066768013300031723SoilAKIVFERRHSGQLRTWSGPSRGGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVRSGMCPTTICKSKKKKK
Ga0306918_1024273523300031744SoilMNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPC
Ga0318521_1082133713300031770SoilMLKLSLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCSVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK
Ga0307478_1080974223300031823Hardwood Forest SoilPGQDLREGGKEPMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK
Ga0306919_1001740633300031879SoilMNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0318520_1073295323300031897SoilMNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYR
Ga0306923_1083959923300031910SoilVQCAFCVRIGLSARYAKIVPERGHSGQLRVRAFARGFNMVRKSILAAAATAATSFLPPSSFAKKLHKAKEPPCSVGQACTDKPDKVRRFTGWVTAKRCSYEGKMYQDVFPRYTPGGTCPAATCKSKKKK
Ga0310909_1015036023300031947SoilMNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0306922_1001445783300032001SoilKSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0310911_1032993313300032035SoilMLKLFLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK
Ga0318545_1010661623300032042SoilMLKLSLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKK
Ga0318545_1018332913300032042SoilMNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCY
Ga0318510_1038332613300032064SoilMLKLFLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCSVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.