Metagenome Family F086026

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086026
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	100 residues
Representative Sequence	MNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Number of Associated Samples	85
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.55 %
% of genes near scaffold ends (potentially truncated)	27.93 %
% of genes from short scaffolds (< 2000 bps)	86.49 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.658 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (20.721 % of family members)
Environment Ontology (ENVO)	Unclassified (31.532 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.559 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.17% β-sheet: 12.50% Coil/Unstructured: 68.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00186	DHFR_1	9.01
PF01053	Cys_Met_Meta_PP	5.41
PF03401	TctC	4.50
PF13472	Lipase_GDSL_2	3.60
PF04773	FecR	3.60
PF00210	Ferritin	3.60
PF09939	DUF2171	2.70
PF12221	HflK_N	1.80
PF02775	TPP_enzyme_C	1.80
PF09335	SNARE_assoc	1.80
PF00476	DNA_pol_A	0.90
PF13193	AMP-binding_C	0.90
PF09838	DUF2065	0.90
PF00303	Thymidylat_synt	0.90
PF02272	DHHA1	0.90
PF05974	DUF892	0.90
PF14559	TPR_19	0.90
PF04324	Fer2_BFD	0.90
PF00596	Aldolase_II	0.90
PF00027	cNMP_binding	0.90
PF04379	DUF525	0.90
PF00571	CBS	0.90
PF13458	Peripla_BP_6	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	9.01
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	5.41
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	5.41
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	5.41
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	5.41
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	5.41
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	5.41
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	5.41
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	5.41
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	5.41
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	5.41
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	5.41
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.50
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.80
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.80
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.80
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.90
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	0.90
COG2967	Uncharacterized conserved protein ApaG affecting Mg2+/Co2+ transport	Inorganic ion transport and metabolism [P]	0.90
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.65 %
Unclassified	root	N/A	42.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.03 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.31 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	5.41 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	5.41 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.90 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	4.50 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	3.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
unclassified Pseudorhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes	0.90 %
unclassified Rhodopseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas	0.90 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	4.50 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
Rhodopseudomonas sp. BR0G17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. BR0G17	0.90 %
Pseudorhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	0.90 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10072309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1346	Open in IMG/M
3300004633\|Ga0066395_10769184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	576	Open in IMG/M
3300005332\|Ga0066388_101066870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1363	Open in IMG/M
3300005332\|Ga0066388_107159831	Not Available	561	Open in IMG/M
3300005435\|Ga0070714_100230799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1705	Open in IMG/M
3300005436\|Ga0070713_100599906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300005436\|Ga0070713_101430560	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005436\|Ga0070713_101478627	Not Available	659	Open in IMG/M
3300005445\|Ga0070708_102037910	Not Available	531	Open in IMG/M
3300005529\|Ga0070741_11181961	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300005534\|Ga0070735_10202467	All Organisms → cellular organisms → Bacteria → Proteobacteria	1214	Open in IMG/M
3300005561\|Ga0066699_10926869	Not Available	607	Open in IMG/M
3300005568\|Ga0066703_10750968	Not Available	559	Open in IMG/M
3300005598\|Ga0066706_10321295	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300005764\|Ga0066903_100074110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4383	Open in IMG/M
3300005764\|Ga0066903_100629615	Not Available	1869	Open in IMG/M
3300005764\|Ga0066903_102133280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1079	Open in IMG/M
3300005764\|Ga0066903_102798484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	946	Open in IMG/M
3300006032\|Ga0066696_10631859	Not Available	693	Open in IMG/M
3300006046\|Ga0066652_100760527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	925	Open in IMG/M
3300006052\|Ga0075029_100753953	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300006057\|Ga0075026_100145506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1213	Open in IMG/M
3300006174\|Ga0075014_100570550	Not Available	643	Open in IMG/M
3300006755\|Ga0079222_10049261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1945	Open in IMG/M
3300006755\|Ga0079222_11717977	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300006800\|Ga0066660_10429195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300006804\|Ga0079221_10043768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1973	Open in IMG/M
3300006854\|Ga0075425_101508100	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300006893\|Ga0073928_10255973	Not Available	1336	Open in IMG/M
3300006893\|Ga0073928_10724978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300009089\|Ga0099828_11376398	Not Available	623	Open in IMG/M
3300009090\|Ga0099827_10319474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300009792\|Ga0126374_10073714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1837	Open in IMG/M
3300010046\|Ga0126384_10056166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2739	Open in IMG/M
3300010048\|Ga0126373_10022335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5366	Open in IMG/M
3300010358\|Ga0126370_10302137	Not Available	1270	Open in IMG/M
3300010359\|Ga0126376_10032749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3533	Open in IMG/M
3300010359\|Ga0126376_11201826	Not Available	773	Open in IMG/M
3300010359\|Ga0126376_11367359	Not Available	731	Open in IMG/M
3300010361\|Ga0126378_10274177	All Organisms → cellular organisms → Bacteria → Proteobacteria	1785	Open in IMG/M
3300010361\|Ga0126378_10291702	Not Available	1733	Open in IMG/M
3300010361\|Ga0126378_10331416	Not Available	1629	Open in IMG/M
3300010361\|Ga0126378_11424039	Not Available	785	Open in IMG/M
3300010366\|Ga0126379_10965705	Not Available	956	Open in IMG/M
3300010366\|Ga0126379_12796597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	584	Open in IMG/M
3300010366\|Ga0126379_13776489	Not Available	507	Open in IMG/M
3300010376\|Ga0126381_100111241	All Organisms → cellular organisms → Bacteria → Proteobacteria	3523	Open in IMG/M
3300010376\|Ga0126381_100514324	Not Available	1691	Open in IMG/M
3300010376\|Ga0126381_100539398	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300010376\|Ga0126381_101484169	Not Available	980	Open in IMG/M
3300010376\|Ga0126381_104577511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300011269\|Ga0137392_11039469	Not Available	673	Open in IMG/M
3300011271\|Ga0137393_10364681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1235	Open in IMG/M
3300012019\|Ga0120139_1030350	All Organisms → cellular organisms → Bacteria → Proteobacteria	1253	Open in IMG/M
3300012096\|Ga0137389_10513790	Not Available	1028	Open in IMG/M
3300012198\|Ga0137364_10478839	Not Available	935	Open in IMG/M
3300012207\|Ga0137381_10240371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1573	Open in IMG/M
3300012208\|Ga0137376_10392133	All Organisms → cellular organisms → Bacteria → Proteobacteria	1206	Open in IMG/M
3300012209\|Ga0137379_10089326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2964	Open in IMG/M
3300012351\|Ga0137386_10289489	Not Available	1179	Open in IMG/M
3300012361\|Ga0137360_10722216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300012362\|Ga0137361_10684844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300012948\|Ga0126375_10006558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4580	Open in IMG/M
3300016294\|Ga0182041_10132126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1895	Open in IMG/M
3300016319\|Ga0182033_10220648	Not Available	1522	Open in IMG/M
3300016387\|Ga0182040_10082227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2126	Open in IMG/M
3300016422\|Ga0182039_10154343	Not Available	1782	Open in IMG/M
3300017924\|Ga0187820_1051802	Not Available	1111	Open in IMG/M
3300017930\|Ga0187825_10125669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. BR0G17	897	Open in IMG/M
3300017930\|Ga0187825_10143976	Not Available	840	Open in IMG/M
3300017936\|Ga0187821_10334860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	608	Open in IMG/M
3300017959\|Ga0187779_10475886	Not Available	823	Open in IMG/M
3300017993\|Ga0187823_10190900	Not Available	667	Open in IMG/M
3300018060\|Ga0187765_10348925	Not Available	900	Open in IMG/M
3300018060\|Ga0187765_11162945	Not Available	539	Open in IMG/M
3300018482\|Ga0066669_12230274	Not Available	520	Open in IMG/M
3300019888\|Ga0193751_1011709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4587	Open in IMG/M
3300019888\|Ga0193751_1075326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300020010\|Ga0193749_1010597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	1792	Open in IMG/M
3300020580\|Ga0210403_10052282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3266	Open in IMG/M
3300020581\|Ga0210399_10033052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4135	Open in IMG/M
3300021560\|Ga0126371_10092236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2999	Open in IMG/M
3300021560\|Ga0126371_10455405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1425	Open in IMG/M
3300021560\|Ga0126371_11782255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	737	Open in IMG/M
3300025928\|Ga0207700_11792535	Not Available	540	Open in IMG/M
3300027071\|Ga0209214_1010118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1128	Open in IMG/M
3300027548\|Ga0209523_1126363	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300027645\|Ga0209117_1044659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300027725\|Ga0209178_1087012	Not Available	1032	Open in IMG/M
3300027787\|Ga0209074_10113778	Not Available	931	Open in IMG/M
3300027787\|Ga0209074_10290614	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300027882\|Ga0209590_10771741	Not Available	612	Open in IMG/M
3300027986\|Ga0209168_10428482	Not Available	642	Open in IMG/M
3300031231\|Ga0170824_128712140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1448	Open in IMG/M
3300031446\|Ga0170820_17698877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3367	Open in IMG/M
3300031545\|Ga0318541_10236287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1015	Open in IMG/M
3300031640\|Ga0318555_10756402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300031719\|Ga0306917_11008282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	650	Open in IMG/M
3300031723\|Ga0318493_10667680	Not Available	582	Open in IMG/M
3300031744\|Ga0306918_10242735	Not Available	1372	Open in IMG/M
3300031770\|Ga0318521_10821337	Not Available	567	Open in IMG/M
3300031823\|Ga0307478_10809742	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300031879\|Ga0306919_10017406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4256	Open in IMG/M
3300031897\|Ga0318520_10732953	Not Available	618	Open in IMG/M
3300031910\|Ga0306923_10839599	Not Available	1011	Open in IMG/M
3300031947\|Ga0310909_10150360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1914	Open in IMG/M
3300032001\|Ga0306922_10014457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	7786	Open in IMG/M
3300032035\|Ga0310911_10329933	Not Available	880	Open in IMG/M
3300032042\|Ga0318545_10106616	Not Available	984	Open in IMG/M
3300032042\|Ga0318545_10183329	Not Available	748	Open in IMG/M
3300032064\|Ga0318510_10383326	Not Available	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.09%
Aquatic	Environmental → Aquatic	9.01%
Plants	Host-Associated → Plants	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.09%
Freshwater	Environmental → Aquatic → Freshwater	4.50%
Sediment	Environmental → Aquatic → Sediment	2.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.07%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.70%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.70%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100723092	3300003505	Forest Soil	MDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK*
Ga0066395_107691841	3300004633	Tropical Forest Soil	MNMISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACMDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK*
Ga0066388_1010668702	3300005332	Tropical Forest Soil	MSTIRKFMVAAAAAAIATALLPSSSFAKAHNAKELPCSFGQACTDKPDKISQATGWVTTKRCSYESHKLYADLFPCYRPGGACPVAKCKSKK*
Ga0066388_1071598311	3300005332	Tropical Forest Soil	MDTTRKFIVVAAAAAVAISFSPSLAFAKKAHTAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPSYGPGGACPAATCKSKK*
Ga0070714_1002307993	3300005435	Agricultural Soil	MKMIRRFVVAAAAAAIATVLVPASSFAKTHAAKERPCSFGQACTVKPTGVSKTTGWVTTQRCSYESHKMYADLFPCYRPGGACPAATCKGKK*
Ga0070713_1005999062	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKTIRKLIVAAAAAAIATALLPPSSFAKTHKAKERPCSFGQTCTVKPAGVSKATGWVTTQRCSYESHKMYADLFPCYQPGGACPVATCKSKK*
Ga0070713_1014305602	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDTIRKFIVAVAAAAVAISFLPSLAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMFQDVFPCFRPSGACPVATCKPKK*
Ga0070713_1014786272	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLKSSLSGGVPASCEYGQGLREGAKEPMNMIRKFILVAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE*
Ga0070708_1020379101	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVRAFARGVKEPMNMIRKFILAAAATAVVISFLAPSSFAKKSHKAKAPPCSVGQACMDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK*
Ga0070741_111819612	3300005529	Surface Soil	MIRKVVLAAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAV
Ga0070735_102024672	3300005534	Surface Soil	MIRKVVLAAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAVCKSKKK*
Ga0066699_109268691	3300005561	Soil	MIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0066703_107509681	3300005568	Soil	IFPPRPMLKSSLRGGVPSCEYGQGLREGVKEPMNMVRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGTCPAATCKSKK*
Ga0066706_103212952	3300005598	Soil	MNMIRKSVVAAIADSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCPAATCKAKK*
Ga0066903_1000741106	3300005764	Tropical Forest Soil	MSTIRKFMVAAAAAAIATALLPSSSFAKAHNAKELPCSFGQACTDKPDKISQATGWVTTKRCSYESHKLYADLFPCYRPGGACPVATCKSKK*
Ga0066903_1006296153	3300005764	Tropical Forest Soil	MIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWVTVKRCSYDGKMYQDVFPCYTPGGMCPAATCKSKKKK*
Ga0066903_1021332802	3300005764	Tropical Forest Soil	MIRKLIVTAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPGGVSKFTGWVTVKRCSYEGKMYQDAFPCYAPSGTCPAATCKSKKK*
Ga0066903_1027984842	3300005764	Tropical Forest Soil	MIRKSILAGAVVAVALSLSGPSAFAKTSHKAKEPPCNFGQACTNKPDKVSQATGWVTTKRCSYESHKMNADVFPCYQPGGACPAATCKANK*
Ga0066696_106318591	3300006032	Soil	MNMIRKSVVAAIAVAVATSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCTAATCKAKK*
Ga0066652_1007605271	3300006046	Soil	MNMIRKSVVAAIAVAVATSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCPAA
Ga0075029_1007539531	3300006052	Watersheds	GKEPMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK*
Ga0075026_1001455063	3300006057	Watersheds	MDTIRKLIVAAAATAVAASFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK*
Ga0075014_1005705501	3300006174	Watersheds	MIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSQFTGWVTVKRCTYQGKMYQDVFPCYRPGGMCPAATCKSKKSKK*
Ga0079222_100492613	3300006755	Agricultural Soil	MNMIRKLVVAAAAVAVAISLLPASSLAKSHRAKAPACSFGQACIDKPEKVSQATGWSTVKRCSSESHKMYQDVFPCYRPGGMCPAAVCKSKKK*
Ga0079222_117179771	3300006755	Agricultural Soil	VAVAAAAVAISFLPSLAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK*
Ga0066660_104291952	3300006800	Soil	MLKSSLRGGVPSCEYGQGLREGVKEPMNMVRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0079221_100437682	3300006804	Agricultural Soil	MDTIRKSIVAATAAAVAISFLPSPAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK*
Ga0075425_1015081002	3300006854	Populus Rhizosphere	REGGKETMDTIRKSIVAATAAAVAISFLPSLAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMFQDVFPCFRPSGACPVATCKPKK*
Ga0073928_102559731	3300006893	Iron-Sulfur Acid Spring	MLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK*
Ga0073928_107249782	3300006893	Iron-Sulfur Acid Spring	MVRAFARGVKEPMNMIRKFILAAAATAVATSFLPSSSFAKKSHKAKEPPCSMGQACTDKPDKVSKFTGWATAKRCSYEGKMYQDVFPCYKPGGMCPAATCKSKK*
Ga0099828_113763982	3300009089	Vadose Zone Soil	MVRAFAGGKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0099827_103194742	3300009090	Vadose Zone Soil	MLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0126374_100737142	3300009792	Tropical Forest Soil	MLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPGGVSKFTGWVTVKRCSYEGKMYQDPFPCYTPSGTCPAATCKSKKK*
Ga0126384_100561661	3300010046	Tropical Forest Soil	MIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCIMGQACTDKPEKVSKFTGWVTVKRCSYEGKMYQDVFPCYAPGGMCPAAACKSKKK*
Ga0126373_100223358	3300010048	Tropical Forest Soil	MIRKFVVAAAAVAFATSLLGPSAFAKKSHKAKEPPCSFGQACTDKPSKISQSTGWVTTKRCSYESHKMNADLFPCYRPGGACPAATCKAKK*
Ga0126370_103021372	3300010358	Tropical Forest Soil	MLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYLDVFPCYTPGGMCPAATCKSKKKK*
Ga0126376_100327495	3300010359	Tropical Forest Soil	MLKSFPERRRSGQLRTWFNAFARGVNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYLDVFPCYTPGGMCPSATCKSKKKKK*
Ga0126376_112018261	3300010359	Tropical Forest Soil	MLKLFLSGGVPAANMVGAFAKGGLMNMIRKFIVAAVATAVATSFLPPSSFAKKSHKAKEPPCSVGQACMDKPEGASKFTGWQTTKRCGYDGKGKMYQDVFPCYAPAGMCPAAICKSKKKK
Ga0126376_113673591	3300010359	Tropical Forest Soil	AKIVFERRHSGQLQTWSGPSRGGKKPMNMIRKFILVAAAAAVATSLLPPSSFAKKSDKAKEKPCSVGQVCMNKPDKKGWGTVMRCTYDRKMIADFSPCNVHSGMCPTAICKSKKKK*
Ga0126378_102741772	3300010361	Tropical Forest Soil	MNLIRKCIVAAVATAVATALLPSSSFAKSHKAKEPPCNFGQACIDKPDKISKATGWSTVKRCSYESHKMYRDVFPCYRTGGACPAATCKSAKK*
Ga0126378_102917022	3300010361	Tropical Forest Soil	MIRKSILAGAVVAVALSLSGPSAFAKTSHKAKEPPCNFGQACTNKPDKVSRATGWVTTKRCSYESHKMNADVFPCYAPGGACPAATCKAKK*
Ga0126378_103314162	3300010361	Tropical Forest Soil	MIRKFILAAAATAVTTSFLPPSSFAKKSHKAKEPPCIMGQACTDKPEKVSKFTGWVTVKRCSYEGKMYQDVFPCYAPGGMCPAAACKSKKK*
Ga0126378_114240391	3300010361	Tropical Forest Soil	GQLRTWFNAFARGVNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYQDVFPCYTLGGMCPAATCKSKKKK*
Ga0126379_109657052	3300010366	Tropical Forest Soil	MLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCAWVRPVRNKPDKVSKFTGWATVKRCSYDGKMYLDVFPCYTPGGMCPAATCKSKKKK*
Ga0126379_127965971	3300010366	Tropical Forest Soil	LAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACMDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK*
Ga0126379_137764891	3300010366	Tropical Forest Soil	PCGKVASCAFWCELVFRPRSMLKSSLSGGVPASYKHWSGFREGVNVIRKLIVTAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPGGVSKFTGWVTVKRCSYEGKMYQDAFPCYAPSGTCPAATCKSKKK*
Ga0126381_1001112413	3300010376	Tropical Forest Soil	MNMISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK*
Ga0126381_1005143242	3300010376	Tropical Forest Soil	MIRKSILAGAVVAVALSLSGPSAFAKTSHKAKEPPCNFGQACTNKPDKVSQATGWVTTKRCSYESHKMNADVFPCYAPGGACPAATCKAKK*
Ga0126381_1005393982	3300010376	Tropical Forest Soil	MLKSFPERRRSGQLRTWFNAFARGFNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYQDVFPCYTPGGMCPSATCKSKKKK*
Ga0126381_1014841692	3300010376	Tropical Forest Soil	MGTAVAIAIAFLPPSAFAKKSHKAKEPPCSFGQACTNKPAGVSKATGWVTTKRCSYESHKMYEDLFPCYAPGGACPAATCKAKK*
Ga0126381_1045775112	3300010376	Tropical Forest Soil	LWQPPALAVAALLLPPEAFAKASHKAKEPPCNFGQACTNKPAGVSKATGWVTTQRCSYESHKMYADLFPCYAPGGACPAAACKAKKK*
Ga0137392_110394691	3300011269	Vadose Zone Soil	MVRAFAEGKEPMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137393_103646811	3300011271	Vadose Zone Soil	MVRAFAGGKESMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0120139_10303502	3300012019	Permafrost	MNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK*
Ga0137389_105137902	3300012096	Vadose Zone Soil	MLKSSLSGGVPASCEHGQSLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACMDKPDKIGKFTGWATVKRCSYEGKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137364_104788391	3300012198	Vadose Zone Soil	MVRAFAGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137381_102403711	3300012207	Vadose Zone Soil	MVRAFAGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKLTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137376_103921332	3300012208	Vadose Zone Soil	MNMIRKFILVAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE*
Ga0137379_100893264	3300012209	Vadose Zone Soil	MVRAFAGGKEPMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137386_102894891	3300012351	Vadose Zone Soil	MVRAFAGVKEPMNMIRKFILAAAATAVATSFSPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0137360_107222162	3300012361	Vadose Zone Soil	MLKSSLRGGVPASCEYGQGLREGVKEPTNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPGGMCPAAT
Ga0137361_106848442	3300012362	Vadose Zone Soil	QGLREGVKEPMNMVRKFILAAAATAVATSFLPPSSFAKKSHKAKEPQCSVGQACTDKPDQVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPAATCKSKK*
Ga0126375_100065583	3300012948	Tropical Forest Soil	MLKSFPERRRSGQLRTWFNAFARGVNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYDGKMYQDVFPCYTLGGMCPAATCKSKKKK*
Ga0182041_101321263	3300016294	Soil	MNTISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0182033_102206483	3300016319	Soil	MLKLTLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVRSGMCPT
Ga0182040_100822272	3300016387	Soil	MISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0182039_101543432	3300016422	Soil	MLKSSLSGGIPASCEHGQGPREGGKKPMNMIRKFILVAAATAVATSFLPPSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK
Ga0187820_10518022	3300017924	Freshwater Sediment	MNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSMGQACTDKPAGVSKFTGWVTVKRCSYEGKMYQDVFPCYRPSGACPAAICKSKKKT
Ga0187825_101256692	3300017930	Freshwater Sediment	MIRKFLLVAAAAAIATALLPPSSFAKKAHKAKEAPCSFGQACTVKPSGVSKKTGWVTTQRCSYESHKMYADLFPCYQPGGACPVAVCKSKKK
Ga0187825_101439761	3300017930	Freshwater Sediment	MIRKVVLAAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAVCKSKKK
Ga0187821_103348601	3300017936	Freshwater Sediment	MIRKFLLVAAAAAIATALLPPSSFAKKAHKAKEAPCSFGQACTVKPSGVSKKTGWVTTQSCSYESHKMYADLFPCYQPGGACPVAVCK
Ga0187779_104758862	3300017959	Tropical Peatland	MKMIRKTILMSAAVAVAIAFLPPSAFAKKSHKATEPPCNFGQACTDKPAGVSKATGWVTTKRCTYEGHKMYADLFPCYQPGGMCPAATCKAKKK
Ga0187823_101909001	3300017993	Freshwater Sediment	MNMIRKFLLVAAAAAIATALLPPSSFAKKAHKAKEAPCSFGQACTVKPSGVSKKTGWVTTQRCSYESHKMYADLFPCYQPGGACPVAVCKSKKK
Ga0187765_103489252	3300018060	Tropical Peatland	MNMIRKSIFMGAVVAVAISLLPPSAFAKKSHKAKEPPCTFGQACTNKPAGVSKATGWVTTQRCSYESHKMYADLFPCYQPGGMCPAATCKAKKK
Ga0187765_111629451	3300018060	Tropical Peatland	HYTARPAHAKIAPVRRRSGSYECGQGLREGGNMIRKFMLVVAATAVATSFSPSSSFAKKSHKAKEPPCSVGQVCMKKPDKAGWGTVMRCTYDGKMVRDFYPCNVRSGMCPTAICKAKKK
Ga0066669_122302741	3300018482	Grasslands Soil	MNMIRKSVVAAIADSFLSLSAFAKKSHKAKAPPCSFGQACTDKPAKISQATGWVTTKRCSYESHKMYADLFPCYRPGGMCPAATCKAKK
Ga0193751_10117095	3300019888	Soil	MLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Ga0193751_10753262	3300019888	Soil	MVRAFARGVKEPMNMIRKFILAAAATAVATSFLPSSSFAKKSHKAKEPPCSMGQACTDKPDKVSKFTGWATAKRCSYEGKMYQDVFPCYKPSGMCPAATCKSKK
Ga0193749_10105972	3300020010	Soil	MVRAFARGVKEPMNMIRKFILAAAATAVATSFLPSSSFAKKSHKAKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Ga0210403_100522821	3300020580	Soil	AKMASERRRSGQQHGQDLREGGKEPMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK
Ga0210399_100330523	3300020581	Soil	MDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK
Ga0126371_100922364	3300021560	Tropical Forest Soil	MIRKFVVAAAAVAFATSLLGPSAFAKKSHKAKEPPCSFGQACTDKPSKISQSTGWVTTKRCSYESHKMNADLFPCYRPGGACPAATCKAKK
Ga0126371_104554052	3300021560	Tropical Forest Soil	SKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACMDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0126371_117822552	3300021560	Tropical Forest Soil	SKFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0207700_117925351	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKTIRKLIVAAAAAAIATALLPPSSFAKTHKAKERPCSFGQTCTVKPAGVSKATGWVTTQRCSYESHKMYADLFPCYQPGGACPVLARPRGRGGRGHRRGRAHR
Ga0209214_10101182	3300027071	Forest Soil	MDTIRKFIVAVAAAAVAISFLPSPAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK
Ga0209523_11263632	3300027548	Forest Soil	VAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPEKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAAACKPKKSKK
Ga0209117_10446592	3300027645	Forest Soil	MNMIRKFILAAAATAVATSFLPPSSFAKKSHKTKEPPCSVGQACKDKPDKVSKITGWATVKRCSYEGKMYQDVFPCYTPGGMCPAATCKSKK
Ga0209178_10870122	3300027725	Agricultural Soil	MDTIRKSIVAAAAAAVAISFLPSLAFAKKAHKAKAPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK
Ga0209074_101137781	3300027787	Agricultural Soil	MNMIRKLVVAAAAVAVAISLLPASSLAKSHRAKAPACSFGQACIDKPEKVSQATGWSTVKRCSYESHKMYQDVFPCYRPGGMCPAAVCKSKKT
Ga0209074_102906142	3300027787	Agricultural Soil	LREGGKETMDTIRKSIVAATAAAVAISFLPSPAFAKKAHKAKEPLCSFGQACTDKPAKVSQATGWVTVKRCSYEGKMYQDVFPCFRPGGACPAATCKSKK
Ga0209590_107717411	3300027882	Vadose Zone Soil	MLKSSLSGGVPASCEYGQGLREGVKEPMNMIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYERKMYQDVFPCYTPSGMCPA
Ga0209168_104284821	3300027986	Surface Soil	AAAAVALATALLPSSSFAKKAHKAKPPACSFGQACIDKPDKVSQATGWSTVKRCSYESHKMYQDAFPCYRPGGMCPTAVCKSKKK
Ga0170824_1287121401	3300031231	Forest Soil	MNMIRKFILTAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE
Ga0170820_176988773	3300031446	Forest Soil	MIRKFILAAAATAVATSFLPPSSFAKKSHKAKEPPCSVGQACTDKPDKVSKFTGWATVKRCSYEGKMYQDVFPCYTPDDMALGVCRATAMWPRQLPCGE
Ga0318541_102362872	3300031545	Soil	MNMISKFFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0318555_107564021	3300031640	Soil	FLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDQVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0306917_110082822	3300031719	Soil	KFFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0318493_106676801	3300031723	Soil	AKIVFERRHSGQLRTWSGPSRGGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVRSGMCPTTICKSKKKKK
Ga0306918_102427352	3300031744	Soil	MNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPC
Ga0318521_108213371	3300031770	Soil	MLKLSLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCSVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK
Ga0307478_108097422	3300031823	Hardwood Forest Soil	PGQDLREGGKEPMDTIRKLIVAAAATAVAISFLPSPSFAKKSHKAKEPLCSVGQACTDKPDKVSQFTGWVTVKRCSYEGKMFQDVFPCYRPGGACPAATCKPKKSKK
Ga0306919_100174063	3300031879	Soil	MNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0318520_107329532	3300031897	Soil	MNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYR
Ga0306923_108395992	3300031910	Soil	VQCAFCVRIGLSARYAKIVPERGHSGQLRVRAFARGFNMVRKSILAAAATAATSFLPPSSFAKKLHKAKEPPCSVGQACTDKPDKVRRFTGWVTAKRCSYEGKMYQDVFPRYTPGGTCPAATCKSKKKK
Ga0310909_101503602	3300031947	Soil	MNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERPCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0306922_100144578	3300032001	Soil	KSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCYRPGGACPAATCKAKKK
Ga0310911_103299331	3300032035	Soil	MLKLFLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK
Ga0318545_101066162	3300032042	Soil	MLKLSLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCTVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKK
Ga0318545_101833291	3300032042	Soil	MNMISKSFLAVAAIAVATSLLPSSSFAKKSHKAKERLCSVGQACTDKPDKVSNATGWVTVKRCSYDGKGKMYQDVFPCY
Ga0318510_103833261	3300032064	Soil	MLKLFLSGGIPASCEHGQGLREGGKKPMNMIRKFILVAAATAVATSFLPSSSFAKKSDKAKEKPCSVGQVCMNKPDKKGWGTVMRCTYDRKMIGDFSPCNVHSGMCPTAICKSKKKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086026

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences