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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F086004 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 111 |
| Average Sequence Length | 141 residues |
| Representative Sequence | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Number of Associated Samples | 95 |
| Number of Associated Scaffolds | 111 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 55.45 % |
| % of genes near scaffold ends (potentially truncated) | 51.35 % |
| % of genes from short scaffolds (< 2000 bps) | 87.39 % |
| Associated GOLD sequencing projects | 87 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.76 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (85.586 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.126 % of family members) |
| Environment Ontology (ENVO) | Unclassified (37.838 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (43.243 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 45.29% Coil/Unstructured: 54.71% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.76 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| b.1.4.1: beta-Galactosidase/glucuronidase domain | d4cu7a2 | 4cu7 | 0.69135 |
| b.1.4.1: beta-Galactosidase/glucuronidase domain | d2je8a1 | 2je8 | 0.68328 |
| b.1.22.0: automated matches | d6a6ya_ | 6a6y | 0.66155 |
| b.1.18.3: Arthropod hemocyanin, C-terminal domain | d1llaa3 | 1lla | 0.65666 |
| b.1.5.1: Transglutaminase, two C-terminal domains | d1f13a3 | 1f13 | 0.6565 |
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| Pfam ID | Name | % Frequency in 111 Family Scaffolds |
|---|---|---|
| PF14520 | HHH_5 | 41.44 |
| PF00196 | GerE | 6.31 |
| PF00175 | NAD_binding_1 | 0.90 |
| PF07676 | PD40 | 0.90 |
| PF03358 | FMN_red | 0.90 |
| PF03167 | UDG | 0.90 |
| PF04542 | Sigma70_r2 | 0.90 |
| COG ID | Name | Functional Category | % Frequency in 111 Family Scaffolds |
|---|---|---|---|
| COG0568 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | Transcription [K] | 0.90 |
| COG0692 | Uracil-DNA glycosylase | Replication, recombination and repair [L] | 0.90 |
| COG1191 | DNA-directed RNA polymerase specialized sigma subunit | Transcription [K] | 0.90 |
| COG1573 | Uracil-DNA glycosylase | Replication, recombination and repair [L] | 0.90 |
| COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 0.90 |
| COG3663 | G:T/U-mismatch repair DNA glycosylase | Replication, recombination and repair [L] | 0.90 |
| COG4941 | Predicted RNA polymerase sigma factor, contains C-terminal TPR domain | Transcription [K] | 0.90 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 85.59 % |
| All Organisms | root | All Organisms | 14.41 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 26.13% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 13.51% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 9.01% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 7.21% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.50% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 3.60% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.60% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 3.60% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 3.60% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.70% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 2.70% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 1.80% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.80% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.80% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 1.80% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.80% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.90% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.90% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.90% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.90% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.90% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.90% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.90% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.90% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004785 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010146 | Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012398 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015 | Environmental | Open in IMG/M |
| 3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
| 3300019233 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019255 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019269 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019279 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020002 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1 | Environmental | Open in IMG/M |
| 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
| 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020610 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300021151 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300021315 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300021951 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022720 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027775 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes) | Environmental | Open in IMG/M |
| 3300028711 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150 | Environmental | Open in IMG/M |
| 3300028715 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203 | Environmental | Open in IMG/M |
| 3300028768 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119 | Environmental | Open in IMG/M |
| 3300028791 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144 | Environmental | Open in IMG/M |
| 3300028799 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123 | Environmental | Open in IMG/M |
| 3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
| 3300028824 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300030784 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 6A (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030858 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6B (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030904 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030905 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030989 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030997 | Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031039 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031094 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031096 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031097 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031123 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031422 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
| 3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
| 3300034090 | Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N | Environmental | Open in IMG/M |
| 3300034680 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034681 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| C688J35102_1209778683 | 3300002568 | Soil | MLTLPAKGQIQFMPPGGAYLTVTSITDPNGAPLDVIDVDQGFSVSGSVVLPNWLGGTATVCIWADEQGGPIDQVLSPCFDLTLKPSNTEPNPKTYDWKIDFPGTVLPDPHQGSQIYHLLAKFMYQNQATDIAGFADMGYALIN* |
| Ga0063454_1000208034 | 3300004081 | Soil | PMLTLPAKGQIQFMPPGGAYLTVTSITDPNGAPLDVIDVDQGFSVSGSVVLPNWLGGTATVCIWADEQGGPIDQVLSPCFDLTLKPSNTEPNPKTYDWKIDFPGTVLPDPHQGSQIYHLLAKFMYQNQATDIAGFADMGYALIN* |
| Ga0062590_1026376971 | 3300004157 | Soil | MPVPVTGPIQFVPPGGVYLTVDSVTDPGGAPADVIDVDLGFKVSGTVVLPNWLAGTATVCIWADEQGGTIDRALSPCATITLTPSNTEPNPKVYPWSITFSGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0058858_14417401 | 3300004785 | Host-Associated | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFMVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0058859_118221201 | 3300004798 | Host-Associated | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDKALSPCATITLTPSTTEPNPKVYHWTINFGGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0058862_124196181 | 3300004803 | Host-Associated | MLTLPARGQIQFMPPGGTYLTVTGITDPNGAPLDVIDVDQGFSVSGEVVLPNWLGGTATVCIWADEQGGPIDQSLSPCFDLMLRPSNTEPNPMSYPWRIDFPGTVLPDPHPGSQIYHLFAKFMYQNQATDIAGFADMGYALIN* |
| Ga0058862_127228941 | 3300004803 | Host-Associated | MSVPASGVIQFVPPGAARLTVDTVTDPNGTPEDVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGTIDRALSPCHTITLSASNAEPSTKVYPWSITFQPNVLPDPSPGSQIYHLLAKFMYEGQPTDIAGFADMGLYLIN* |
| Ga0066809_101584621 | 3300005168 | Soil | MAVPVSGPIQFVPPGGVYLTVDSITDPGGAPADVLDVDLGFSVAGRVVLPNWLGGVGTVTVYADEQGGPIDQALKPTATITLVPSNTEPNPKTYHWKIDFAGNVLPDPSAGSQIYRLLAKFMYEGQATDIAGFVVIGDYLV |
| Ga0070680_1000436524 | 3300005336 | Corn Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITMTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0070691_102188942 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0070713_1004008351 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MPALASGDIQFIPPGSAKLTVDQVTDPNGVPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDRALSPCDTITLTPSNTEPNPKTYAWSITFAGNVLPDPSPGSQIYHLLAKFMYQGQATDIAGFADMGLYLIN* |
| Ga0070713_1008239991 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVTGTVTLPNWLAGTATVCIWADEQGGPIDKALSPCATITLTPSTTEPNPKVYPWTISFTGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0070710_104305232 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MFEAERDDRRSIAMSVPVTGPIQFVPPGGVYLTVDTVTDPGGAPTDVIDVDLGFQVSGTVVLPNWLGGTATVCIWADEQGGKIDRALTPCATITLTPAITEPNPIVYPWSITFTGSVLPDPSKGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0070705_1001968192 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVPVTGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSPTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVLGDYLVN* |
| Ga0070685_103656362 | 3300005466 | Switchgrass Rhizosphere | PGGAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDKALSPCATITLTPSTTEPNPKVYHWTINFGGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMRLYLIN* |
| Ga0070697_1008930201 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVPVTGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSPTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFADMG |
| Ga0070695_1004718742 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFMVTGTVTLPNWLAGTATVCIWADEQGGPIDQALSPCFDLTLKPSATEPNPKTYDWKIDFPGTVLPDPHTGSQIYHLLA |
| Ga0070695_1011081511 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVPVTGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSPTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGF |
| Ga0070693_1004294832 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0066705_106016612 | 3300005569 | Soil | MTLASGDIQFVPPGTAKLTVDSVTDPNGTPGNVLDVDLGFTVSGTVTLPNWLGGTATVCIWADEQGGAIDQVLSPCQTITLTPGTGEPNPMVYSWSITFPGNVLPDPSPGSQIYHLLAKFMYQGQATDIAGFADMGLYLIN* |
| Ga0070712_1001858512 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MPALASGDIQFIPPGTAKLTVDQVTDPNGVPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDRALSPCDTITLTPSNTEPNPKTYAWSITFAGNVLPDPSPGSQIYHLLAKFMYQGQATDIAGFADMGLYLIN* |
| Ga0079222_103547492 | 3300006755 | Agricultural Soil | MLTLPAKGPIQFMPPGGAYLTVTGVTDPNGAPLDVIDVDQGFSVSGQVVLPNWLGGNATVCIWADEQGGPIDQALSPCFDLTLKPSATEPNPKTYDWKIDFPGTVLPDPHTGSQIYHLLAKFMYENQATDIAGFADMGYALIN* |
| Ga0079221_102590801 | 3300006804 | Agricultural Soil | MSVPATGDIQFVPPGGAKLSVDSVTDPGGAPADVLDVDLGFTVTGTITLPNWLAGTATVCIWADEQGGAIDRSLSPCATITLTPSTTEPNPKVYPWTISFTGGVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0075424_1000875883 | 3300006904 | Populus Rhizosphere | MPVPVTGPIQFVPPGGVYLTVDSVTDPGGAPADVIDVDLGFKVSGTVVLPNWLAGTATVCIWADEQGGTIDRALSPCAAITLTPSNTEPNPKVYPWSITFSGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0105238_101234931 | 3300009551 | Corn Rhizosphere | MSVPATGDIQFVPPGAAKLTVLSVTDPNGSPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAVDRALSPCHTITLTASNAEPSTKTYKWAITFGPKVLPDPSSGSQIYHLLAKFMYEG |
| Ga0126320_10511141 | 3300010146 | Soil | PMLTLPAKGQIQFMPPGGAYLTVTSITDPNGAPLDVIDVDQGFSVSGSVVLPNWLGGTATVCIWADEQGGPIDQVLSPCFDLTLKPSNTEPNPKTYDWKIDFPGTVLPDPNQGSQIYHLLAKFMYQNQATDIAGFADMGYALIN* |
| Ga0126319_10362501 | 3300010147 | Soil | MTIPVQGTIQFVPPGGTFLTVDSVTDPGGAPADVIDVDLGFQVSGTVVLPNWLAGTATITIYADEQGGPIDKALTPIATIPLVANPAEPNPKTYPWSIAFPGNVLPDPSAGSQIYRLLAKFMYEGQATDIAGFVVLGDYLVN* |
| Ga0127503_110899911 | 3300010154 | Soil | MTIPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSATEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN* |
| Ga0127503_112984232 | 3300010154 | Soil | MTVPVKGNIQFVPPGGVFMTVDSITDPGGAPADVLDVDLGFSVAGRVVLPNWLAGTGTVTVYADEQGGPIDQALKPSATITLAPSNTEPNPKTYKWHIDFAGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVIGDYLVN* |
| Ga0134125_104748061 | 3300010371 | Terrestrial Soil | LSVDSVTDPGGAPADVLDVDLGFTVTGTITLPNWLAGTATVCIWADEQGGAIDRSLSPCATITLTPSTTEPNPKVYPWTISFTGGVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0134128_111006942 | 3300010373 | Terrestrial Soil | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDKALSPCATITLTPSTTEPNPKVYHWTINFGGSVLPDPSSGSQIYHLLAKFMYE |
| Ga0134128_116656971 | 3300010373 | Terrestrial Soil | LSGSDIGQIRAFVFLWRSRDAWERAGITTEGAAMLTLPAKGPIQFMPPGGAYLTVTGVTDPNGAPLDVIDVDQGFSVSGQVVLPNWLGGNATVCIWADEQGGPIDQALSPCFDLTLKPSATEPNPKTYDWKIDFPGTVLPDPHTGSQIYHLLAKFMYENQATDIAGFADMGYALIN* |
| Ga0150985_1127534831 | 3300012212 | Avena Fatua Rhizosphere | KERPMLTLPAKGQIQFMPPGGAYLTVTDVTDKNGAPADVIDVDQGFTVSGQVSLPNWLGGNATVCIWADEQGGPIDQSLSPCFDLKLKPPNTEPSPVTYDWKITFPGNVLPDPHPGSQIYHLFAKFMYQNQATDVAGFADIGYALIN* |
| Ga0134051_12777981 | 3300012398 | Grasslands Soil | PMLTLPAKGQIQFMPPGGAYLTVTEVTDKNGAPADVIDVDQGFTVSGQVSLPNWLGGNATVCIWADEQGGPIDQSLSPCFDLKLKPPNTEPSPVTYDWKITFPGNVLPDPHPGSQIYHLFAKFMYQNQATDVAGFADIGYALIN* |
| Ga0150984_1202598621 | 3300012469 | Avena Fatua Rhizosphere | PKERPMLTLPAKGQIQFMPPGGAYLTVTSITDPNGAPLDVIDVDQGFSVSGSVVLPNWLGGTATVCIWADEQGGPIDQVLSPCFDLTLKPSNTEPNPKTYDWKIDFPGTVLPDPHQGSQIYHLLAKFMYQNQATDIAGFADMGYALIN* |
| Ga0150984_1202645131 | 3300012469 | Avena Fatua Rhizosphere | PKERPMLTLPAKGQIQFMPPGGAYLTVTDVTDKNGAPADVIDVDQGFTVSGQVSLPNWLGGNATVCIWADEQGGPIDQSLSPCFDLKLKPPNTEPSPVTYDWKITFPGNVLPDPHPGSQIYHLFAKFMYQNQATDVAGFADIGYALIN* |
| Ga0137410_111985862 | 3300012944 | Vadose Zone Soil | GGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN* |
| Ga0164299_102665421 | 3300012958 | Soil | MTVPATGDIQFVPPGGAKLTVDSVTDLGGAPADVLDVDLGFTVTGIVTLPNWLAGTATVCIWADEQGGPIDKALSPCATITLTPSTTEPNPKVYPWTISFTGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0164307_111065901 | 3300012987 | Soil | MTIPVKGPIQFVPPGGVFLTVDSITEPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSATEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN* |
| Ga0164307_116521621 | 3300012987 | Soil | MTVPVKGNIQFVPPGGVFLTVDSITDPGGAPADVLDVDLGFSVAGRVVLPNWLAGTGTVTVYADEQGGPIDQALKPSATITLTPSNTEPNPKTYKWHIDFAGSVLPDPSSGSQIYRLLAK |
| Ga0157369_101967634 | 3300013105 | Corn Rhizosphere | TTEGASIMSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDKALSPCATITLTPSTTEPNPKVYHWTINFGGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0157369_102504183 | 3300013105 | Corn Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSTTEPNPKVYHWTISFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0157369_115081232 | 3300013105 | Corn Rhizosphere | QFVPPGAAKLTVLSVTDPNGSPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAVDRALSPCHTITLTASNAEPSTKTYKWAITFGPKVLPDPSSGSQIYHLLAKFMYEGQPTDIAGFADMGLYLIN* |
| Ga0157374_115904891 | 3300013296 | Miscanthus Rhizosphere | IMTVPATGDIQFVPPGAAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSTTEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN* |
| Ga0157372_131759371 | 3300013307 | Corn Rhizosphere | MSVPATGDIQFVPPGAAKLTVLSVTDPNGSPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAVDRALSPCHTITLTASNAEPSTKTYKWAITFGPKVLPDPSSGSQIYHLLAKFMYEGQPTDIAGFADMGLYLIN* |
| Ga0134079_102498221 | 3300014166 | Grasslands Soil | AAAIQFVPPGTAKLTVDSVTDPNGTPGNVLDVDLGFTVSGTVTLPNWLGGTATVCIWADEQGGAIDQVLSPCQTITLTPGTGEPNPMVYSWSITFPGNVLPDPSPGSQIYHLLAKFMYQGQATDIAGFADMGLYLIN* |
| Ga0137409_110468951 | 3300015245 | Vadose Zone Soil | GGAPADVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN* |
| Ga0132256_1017228201 | 3300015372 | Arabidopsis Rhizosphere | MTIPVQGSIQFEPPGGVFLTVDSVTDPGGAPADVIDVDLGFKVSGTVVLPNWLAGTGTVTIYADEQGGPLDKALSPIANITLTPSNTEPNPKTYPWSITFPGNVLPDPSAGSQIYRLLAKFMYEGQASDIAGFV |
| Ga0184608_103462181 | 3300018028 | Groundwater Sediment | MTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAK |
| Ga0184645_13438941 | 3300019233 | Groundwater Sediment | MTIPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0184643_11913161 | 3300019255 | Groundwater Sediment | DSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLV |
| Ga0184643_12590991 | 3300019255 | Groundwater Sediment | MTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0184646_16330401 | 3300019259 | Groundwater Sediment | ASSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0184644_12139891 | 3300019269 | Groundwater Sediment | MTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0184642_17029782 | 3300019279 | Groundwater Sediment | VPEQKSVGKGNRSGESDDSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0193728_13145851 | 3300019890 | Soil | MPVPVTGPIQFVPPGGVYLTVDTVTDPGGDPTEVLDVDLGFQVSGTVVLPNWLGGTATVCIWADEQGGKIDKALSPCATITLTPAITEPNPIVYPWSISFRGNVLPDPSKGSQIYHLLAK |
| Ga0193728_13257231 | 3300019890 | Soil | MLTLPATGQIQFMPPGGTYLTVTSVTDPNGAPLDVIDVDQGFSVSGKVVLPNWLGGTATVCIWADEQGGPIDQVLSPCFDLTLRPSDTEPNPKTYDWKIDFPGTVLPDPHQGSQIYHLLAKFMYQNQATDIAGFADMGYALIN |
| Ga0193730_11037562 | 3300020002 | Soil | SITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0197907_101927371 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MLTLPAKGPIQFMPPGGAYLTVTGVTDPNGAPLDVIDVDQGFSVSGQVVLPNWLGGNATVCIWADEQGGPIDQALSPCFDLTLKPSATEPNPKTYDWKIDFPGTVLPDPHTGSQIYHLLAKFMYENQATDIAGFADMGYALIN |
| Ga0206356_108738971 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | TDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDKALSPCATITLTPSTTEPNPKVYHWTINFGGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0206356_111920621 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | MPVPVTGPIQFVPPGGVYLTVDSVTDPGGAPADVIDVDLGFKVSGTVVLPNWLAGTATVCIWADEQGGTIDRALSPCATITLTPSNTEPNPKVYPWSITFSGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0206349_13356862 | 3300020075 | Corn, Switchgrass And Miscanthus Rhizosphere | AKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDKALSPCATITLTPSTTEPNPKVYHWTINFGGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0206355_10001071 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDKALSPCATITLTPSTTEPNPKVYHWTINFGGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0206351_103109201 | 3300020077 | Corn, Switchgrass And Miscanthus Rhizosphere | GAAMLTLPAKGPIQFMPPGGAYLTVTGVTDPNGAPLDVIDVDQGFSVSGQVVLPNWLGGNATVCIWADEQGGPIDQALSPCFDLTLKPSATEPNPKTYDWKIDFPGTVLPDPHTGSQIYHLLAKFMYENQATDIAGFADMGYALIN |
| Ga0206351_109542171 | 3300020077 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFMVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSTTEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0206354_101594031 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | TDPGGAPADVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0154015_16022571 | 3300020610 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0179584_12386142 | 3300021151 | Vadose Zone Soil | MTIPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0179958_10256741 | 3300021315 | Vadose Zone Soil | MTIPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSATEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0222624_10103741 | 3300021951 | Groundwater Sediment | RTPARFPPTNARASYRDTTGPPTTEHGLAIAAGEDDDLRSISMAVPVTGPIQFVPPGGVYLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGSGTVCIYVDEQGGPIDEALSPCATITLVPTNTEPNPKVYPWTISFPGTVLPDPSPGSQIYRLLAKFMYENQATDIAGFVVIGDYLIN |
| Ga0222625_18086262 | 3300022195 | Groundwater Sediment | LFLQPVPEQKSVGKGNRSGESDDSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0224712_104011731 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGAAKLTVLSVTDPNGSPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAVDRALSPCHTITLTASNAEPSTKTYKWAITFGPKVLPDPSSGSQIYHLLAKFMYEGQPTDIAGFADMGLYLIN |
| Ga0242672_10807111 | 3300022720 | Soil | MTVPVKGNIQFVPPGGVFMTVDSITDPGGAPADVLDVDLGFSVAGRVVLPNWLAGTGTVTVYADEQGGPIDQALKPSATITLAPSNTEPNPKTYKWHIDFAGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVMGDYLVN |
| Ga0207653_103577231 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFMVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITLTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0207692_100147463 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVTGTVTLPNWLAGTATVCIWADEQGGPIDKALSPCATITLTPSTTEPNPKVYPWTISFTGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0207692_104580112 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MFEAERDDRRSIAMSVPVTGPIQFVPPGGVYLTVDTVTDPGGAPTDVIDVDLGFQVSGTVVLPNWLGGTATVCIWADEQGGKIDRALTPCATITLTPAITEPNPIVYPWSITFTGSVLPDPSKGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0207693_108607441 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MPALASGDIQFIPPGTAKLTVDQVTDPNGVPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDRALSPCDTITLTPSNTEPNPKTYAWSITFAGNVLPDPSPGSQIYHLLAKFMYQGQATDIAGFADMGLYLIN |
| Ga0207660_100367763 | 3300025917 | Corn Rhizosphere | MSVPATGDIQFVPPGGAKLTVDSVTDPGGAPADVLDVDLGFTVTGTVTLPNWLAGTATVCIWADEQGGTIDKALSPCATITMTPSATEPNPKVYRWTITFAGSVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0207700_103758572 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | MPALASGDIQFIPPGSAKLTVDQVTDPNGVPGNVLDVDLGFTVSGTVTLPNWLAGTATVCIWADEQGGAIDRALSPCDTITLTPSNTEPNPKTYAWSITFAGNVLPDPSPGSQIYHLLAKFMYQGQATDIAGFADMGLYLIN |
| Ga0207698_114103992 | 3300026142 | Corn Rhizosphere | DPNGAPLDVIDVDQGFSVSGQVVLPNWLGGNATVCIWADEQGGPIDQALSPCFDLTLKPSATEPNPKTYDWKIDFPGTVLPDPHTGSQIYHLLAKFMYENQATDIAGFADMGYALIN |
| Ga0209177_103371522 | 3300027775 | Agricultural Soil | MLTLPAKGPIQFMPPGGAYLTVTGVTDPNGAPLDVIDVDQGFSVSGQVVLPNWLGGNATVCIWADEQGGPIDQALSPCFDLTLKPSATEPNPKTYDWKIDFPGTVLPDPHTGSQIYH |
| Ga0307293_101001951 | 3300028711 | Soil | MTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0307313_100420371 | 3300028715 | Soil | VLFRLQVFFSSQFRSRKSVGKGNRSGESADSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0307280_102390222 | 3300028768 | Soil | PGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0307290_100496673 | 3300028791 | Soil | PGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0307284_102036841 | 3300028799 | Soil | PPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0307296_106355181 | 3300028819 | Soil | MTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGSGTVCIYVDEQGGPIDEALSPCATITLVPTNTEPNPKVYPWTISFPGTVLPDPSPGSQIYRLLAKFMYENQATDIAGFVVIGDYLIN |
| Ga0307310_101117471 | 3300028824 | Soil | PVPEQKSVGKGNRSGESDDSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0307304_100201905 | 3300028885 | Soil | PPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0102758_109805811 | 3300030784 | Soil | LFQSLLNFHFLTLPAKGQIQFMPPGGAYLEVTSVTDPNGAPADVIDVDQGFTVSGDVVLPNWLGGTATVCIWADEQGGPIDQALSPCFDLTLKPSNTEPNPKKYAWKITFAGNVLPDPQPSGSQIYHLFAKFMYQNQATDIAGFADIGFVLIN |
| Ga0102759_17519881 | 3300030858 | Soil | RAMLTLPAKGQIQFMPPGGAYLEVTSVTDPNGAPADVIDVDQGFTVSGDVVLPNWLGGTATVCIWADEQGGPIDQALSPCFDLTLKPSNTEPNPKKYAWKITFAGNVLPDPQPSGSQIYHLFAKFMYQNQATDIAGFADIGFVLIN |
| Ga0308198_10741161 | 3300030904 | Soil | MTVPVTGNIQFMPPGGVFLTVDSISDPGGAPAEVLDVDQGFTVQGTVVLPNWLAGTGTVTIYADEQGGPIDKALQPSATITLAPSSTEPNPKKYAWSIAFGGNVLPDPSAGSQIYRLLAKFMYEGQATDIAGFVVIGDYLVN |
| Ga0308200_11416641 | 3300030905 | Soil | MTIPVTGPIQFVPPGGVFLTVDSVTDPGGAPADVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATITLAPSNTEPNPKTYPWKITFPGNVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVLGDYLVN |
| Ga0308196_10299001 | 3300030989 | Soil | SMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0073997_118137731 | 3300030997 | Soil | SAMLTLPAKGQIQFMPPGGAYLTVTSVTDPNGAPLDVIDVDQGFTVSGKVVLPNWLGGTATVCIWADEQGGPIDQVLSPCFDLTLKPSDTEPGAKEYDWSIDFKGKGKVLPLPDPHDGSQIYHLLAKFMYQNQATDIAGFADMGYALIN |
| Ga0102760_109296501 | 3300031039 | Soil | KGQIQFMPPGGAYLEVTSVTDPNGAPADVIDVDQGFTVSGDVVLPNWLGGTATVCIWADEQGGPIDQALSPCFDLTLKPSNTEPNPKKYAWKITFAGNVLPDPQPSGSQIYHLFAKFMYQNQATDIAGFADIGFVLIN |
| Ga0308189_105110191 | 3300031058 | Soil | PMLTLPAKGQIQFMPPGGAYLTVTSITDPNGAPLDVIDVDQGFSVSGSVVLPNWLGGTATVCIWADEQGGPIDQVLSPCFDLTLKPSNTEPNPKTYDWKIDFPGTVLPDPHQGSQIYHLLAKFMYQNQATDIAGFADMGYALIN |
| Ga0308199_11505721 | 3300031094 | Soil | MTIPVTGPIQFVPPGGVFLTVDSVTDPGGAPADVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATITLAPSNTEPNPKTYPWKITFPGNVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLV |
| Ga0308199_11666091 | 3300031094 | Soil | MTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYPWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0308193_10899961 | 3300031096 | Soil | MTIPVTGPIQFVPPGGVFLTVDSVTDPGGAPADVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATITLAPSNTEPNPKTYPWKITFPGNVLPDPSSGSQIYRLLAKFMYEGQA |
| Ga0308188_10134882 | 3300031097 | Soil | PGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYPWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0308187_101984361 | 3300031114 | Soil | LFLQPVPEQKRVGKGNRSGESDDSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0308187_103863561 | 3300031114 | Soil | AMIEATPEGACAMTVPVTGPIQFVPPGGVYLTVDSITDPGGAPAEVIDVDLGFRVSGRVVLPNWLAGSASVCIWADEQGGAIDRALSPCATITLTPSNTEPNPKVYPWSISFSGNVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0308195_10540691 | 3300031123 | Soil | SKPVPEQKRVGKGNRSGESDDSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0308194_102884291 | 3300031421 | Soil | MTIPVTGPIQFVPPGGVFLTVDSVTDPGGAPADVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATITLAPSNTEPNPKIYPWKITFPGNVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVLGDYLVN |
| Ga0308186_10258711 | 3300031422 | Soil | SSKPVPEQKRVGKGNRSGESDDSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSSGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0308174_100420153 | 3300031939 | Soil | MSVPATGDIQFVPPGGAKLSVDSVTDPGGAPADVLDVDLGFTVTGTITLPNWLAGTATVCIWADEQGGAIDRSLSPCATITLTPSTTEPNPKVYPWTISFTGGVLPDPSSGSQIYHLLAKFMYEGQATDIAGFADMGLYLIN |
| Ga0326726_100684692 | 3300033433 | Peat Soil | VTVPVTGPIQFVPPGSTFLTVDSVTDPGGAPADVLDVDLGFTVTGRVVLPNWLAGTATVSIWADEQGGPIDKELSPSATITLVPSNTEPNPKVYPWTISFAGNVLPDPSAGSQIYRLLAKFMYQGQATDIAGFADMGLYLIN |
| Ga0326723_0019757_1116_1580 | 3300034090 | Peat Soil | LRPITTTEGASAVTVPVTGPIQFVPPGSTFLTVDSVTDPGGAPADVLDVDLGFTVTGRVVLPNWLAGTATVSIWADEQGGPIDKELSPSATITLVPSNTEPNPKVYPWTISFAGNVLPDPSAGSQIYRLLAKFMYQGQATDIAGFADMGLYLIN |
| Ga0370541_039189_78_593 | 3300034680 | Soil | SFFLQPVPEQKSVGKGNRSGESDDSRSVSMTVPVKGPIQFVPPGGVFLTVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDKVLSPSATIAIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
| Ga0370546_061431_2_373 | 3300034681 | Soil | TVDSITDPGGAPAEVIDVDLGFTVSGTVVLPNWLAGTGTVSIYADEQGGPIDTVLSPSATINIVPSNTEPNPKTYHWTIAFSGSVLPDPSRGSQIYRLLAKFMYEGQATDIAGFVVVGDYLVN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |