Metagenome / Metatranscriptome Family F085983

Overview

Basic Information

• Family ID: F085983
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 111
• Average Sequence Length: 70 residues
• Representative Sequence: MKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALVGVIRLVIHASSASKARS
• Number of Associated Samples: 100
• Number of Associated Scaffolds: 111

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 73.64 %
• % of genes near scaffold ends (potentially truncated): 24.32 %
• % of genes from short scaffolds (< 2000 bps): 76.58 %
• Associated GOLD sequencing projects: 87
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (87.387 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.018 % of family members)
• Environment Ontology (ENVO): Unclassified (19.820 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (59.459 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 63.64%
  β-sheet: 0.00%
  Coil/Unstructured: 36.36%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00293	NUDIX	6.31
PF00753	Lactamase_B	5.41
PF04392	ABC_sub_bind	2.70
PF03061	4HBT	2.70
PF04632	FUSC	1.80
PF02615	Ldh_2	1.80
PF01717	Meth_synt_2	1.80
PF00313	CSD	1.80
PF07690	MFS_1	1.80
PF01494	FAD_binding_3	0.90
PF04892	VanZ	0.90
PF09335	SNARE_assoc	0.90
PF03472	Autoind_bind	0.90
PF13414	TPR_11	0.90
PF04234	CopC	0.90
PF00091	Tubulin	0.90
PF04909	Amidohydro_2	0.90
PF10282	Lactonase	0.90
PF03972	MmgE_PrpD	0.90
PF01266	DAO	0.90
PF00709	Adenylsucc_synt	0.90
PF01425	Amidase	0.90
PF01738	DLH	0.90
PF03781	FGE-sulfatase	0.90
PF13602	ADH_zinc_N_2	0.90
PF07859	Abhydrolase_3	0.90
PF13600	DUF4140	0.90
PF14698	ASL_C2	0.90
PF13561	adh_short_C2	0.90
PF00149	Metallophos	0.90
PF00496	SBP_bac_5	0.90
PF00860	Xan_ur_permease	0.90
PF00497	SBP_bac_3	0.90
PF07729	FCD	0.90
PF03401	TctC	0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.70
COG2197	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	Transcription [K]	1.80
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.80
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.80
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	1.80
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	1.80
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.90
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.90
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	0.90
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.90
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.90
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.90
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.90
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.90
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.90
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.90
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.90
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.90
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.90

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.39 %
Unclassified	root	N/A	12.61 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.39 %
Unclassified	root	N/A	12.61 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.39 %
Unclassified	root	N/A	12.61 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.48 %
Unclassified	root	N/A	12.61 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	70.27 %
Unclassified	root	N/A	12.61 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.64 %
Unclassified	root	N/A	12.61 %

Level 7

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	22.52 %
Unclassified	root	N/A	12.61 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.90 %

Level 8

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	18.02 %
Unclassified	root	N/A	12.61 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.90 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.61 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.90 %
Bradyrhizobium cenepequi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	0.90 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.61 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Bradyrhizobium sp. 62	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 62	0.90 %
Bradyrhizobium cenepequi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	0.90 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2140918008|ConsensusfromContig194648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	916
3300000364|INPhiseqgaiiFebDRAFT_100354822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612
3300000789|JGI1027J11758_11956969	Not Available	523
3300005167|Ga0066672_10215227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1228
3300005171|Ga0066677_10083850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1660
3300005175|Ga0066673_10710297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579
3300005177|Ga0066690_10736424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648
3300005184|Ga0066671_10449934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826
3300005187|Ga0066675_10139614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1651
3300005434|Ga0070709_10418160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi	1004
3300005439|Ga0070711_100516830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986
3300005529|Ga0070741_10034273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6874
3300005533|Ga0070734_10000610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	68671
3300005548|Ga0070665_101280141	All Organisms → cellular organisms → Bacteria → Proteobacteria	743
3300005563|Ga0068855_100184377	All Organisms → cellular organisms → Bacteria → Proteobacteria	2358
3300005566|Ga0066693_10007989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2881
3300005602|Ga0070762_10827308	All Organisms → cellular organisms → Bacteria → Proteobacteria	628
3300005602|Ga0070762_11259762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512
3300005614|Ga0068856_101626968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659
3300005994|Ga0066789_10139632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031
3300005995|Ga0066790_10124831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104
3300006032|Ga0066696_10760374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620
3300006050|Ga0075028_100201303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075
3300006175|Ga0070712_100828916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795
3300006176|Ga0070765_100399061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1284
3300006794|Ga0066658_10299765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859
3300006800|Ga0066660_10128997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1841
3300006800|Ga0066660_10774211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782
3300006893|Ga0073928_10055023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3555
3300006954|Ga0079219_10042111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1903
3300009143|Ga0099792_10169722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1218
3300009162|Ga0075423_11097120	All Organisms → cellular organisms → Bacteria	847
3300009551|Ga0105238_10019087	All Organisms → cellular organisms → Bacteria → Proteobacteria	6985
3300009650|Ga0105857_1243733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536
3300009651|Ga0105859_1201356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585
3300009660|Ga0105854_1055364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1213
3300010364|Ga0134066_10160671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714
3300010379|Ga0136449_100554567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1975
3300012189|Ga0137388_11832663	Not Available	538
3300012361|Ga0137360_10292655	All Organisms → cellular organisms → Bacteria	1350
3300012683|Ga0137398_10220647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1256
3300012924|Ga0137413_11378806	Not Available	569
3300012929|Ga0137404_11464389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631
3300013306|Ga0163162_10123363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2696
3300014165|Ga0181523_10116146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1596
3300014498|Ga0182019_10155885	Not Available	1450
3300014501|Ga0182024_12380100	Not Available	574
3300014838|Ga0182030_10582118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1086
3300015160|Ga0167642_1014399	All Organisms → cellular organisms → Bacteria	1361
3300015206|Ga0167644_1071955	All Organisms → cellular organisms → Bacteria	1130
3300015242|Ga0137412_10213779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1536
3300016750|Ga0181505_10385192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	651
3300018482|Ga0066669_10215781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1484
3300018482|Ga0066669_11352353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645
3300020580|Ga0210403_10108215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2257
3300020583|Ga0210401_10140734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2257
3300021170|Ga0210400_10657595	All Organisms → cellular organisms → Bacteria → Proteobacteria	863
3300021180|Ga0210396_10207913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1747
3300021180|Ga0210396_11692122	Not Available	514
3300021181|Ga0210388_10000009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	419631
3300021403|Ga0210397_10078315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2184
3300021403|Ga0210397_10162749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1569
3300021404|Ga0210389_10002605	All Organisms → cellular organisms → Bacteria → Proteobacteria	14187
3300021404|Ga0210389_10685414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 62	803
3300021404|Ga0210389_11325878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551
3300021405|Ga0210387_11459077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587
3300021405|Ga0210387_11603448	Not Available	554
3300021432|Ga0210384_10249706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1596
3300021432|Ga0210384_10780382	Not Available	853
3300021475|Ga0210392_10300717	Not Available	1150
3300021478|Ga0210402_10281614	All Organisms → cellular organisms → Bacteria	1538
3300021478|Ga0210402_10595928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1024
3300021479|Ga0210410_10020054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5773
3300022557|Ga0212123_10063700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3237
3300025914|Ga0207671_10191980	All Organisms → cellular organisms → Bacteria	1593
3300025916|Ga0207663_10652335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	831
3300025924|Ga0207694_10287508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1351
3300026041|Ga0207639_11301151	All Organisms → cellular organisms → Bacteria	682
3300026078|Ga0207702_10767959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	952
3300026277|Ga0209350_1126356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577
3300026291|Ga0209890_10028947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2126
3300026294|Ga0209839_10152919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761
3300026312|Ga0209153_1266743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548
3300026318|Ga0209471_1120931	All Organisms → cellular organisms → Bacteria	1114
3300026330|Ga0209473_1002420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10265
3300026523|Ga0209808_1025792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2871
3300026542|Ga0209805_1096864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1412
3300027684|Ga0209626_1146792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622
3300027826|Ga0209060_10000472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	74074
3300027895|Ga0209624_10118355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1738
3300027903|Ga0209488_10181803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1586
3300027908|Ga0209006_10005023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12017
3300028379|Ga0268266_10651255	All Organisms → cellular organisms → Bacteria	1014
3300028577|Ga0265318_10314463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571
3300028906|Ga0308309_10483136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1070
3300031235|Ga0265330_10011113	All Organisms → cellular organisms → Bacteria → Proteobacteria	4226
3300031247|Ga0265340_10026870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2906
3300031249|Ga0265339_10035718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2786
3300031249|Ga0265339_10295925	All Organisms → cellular organisms → Bacteria	772
3300031446|Ga0170820_13042295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	971
3300031616|Ga0307508_10000003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	321602
3300031708|Ga0310686_103577965	Not Available	767
3300031711|Ga0265314_10054928	All Organisms → cellular organisms → Bacteria → Proteobacteria	2753
3300031726|Ga0302321_101747832	Not Available	720
3300031902|Ga0302322_103273759	Not Available	556
3300031996|Ga0308176_11796709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654
3300032160|Ga0311301_10792994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1304
3300032676|Ga0316229_1340455	All Organisms → cellular organisms → Bacteria	538
3300033826|Ga0334847_026184	Not Available	646
3300034268|Ga0372943_0000002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	948439

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.78%
Host-Associated	Host-Associated	16.22%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.48%
Plants	Host-Associated → Plants	16.22%
Aquatic	Environmental → Aquatic	6.31%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.50%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Peat	Environmental → Terrestrial → Peat	2.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.80%
Sediment	Environmental → Aquatic → Sediment	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.05%
Loam	Environmental → Terrestrial → Soil → Loam	11.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.90%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.70%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.90%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	5.41%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.90%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300022557	Paint Pots_combined assembly	Environmental
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_04248050	2140918008	Soil	MKANLISIVVGIFIAVVSWVPLWMVEAYDRYAMPVGLGLFALAASFAGGLIALVGLIRLVIQASRTHD
INPhiseqgaiiFebDRAFT_1003548222	3300000364	Soil	MKGKLITICVGVLIAVGSWVPLYIVEALHPSAMPVGLGLITFAASFVGGVIALVGLVRLVAQVSRRPNQDTT*
JGI1027J11758_119569692	3300000789	Soil	MKGKLITICVGVLIAVGSWVPLYIVEALHPSAMPVGLGLITFAASFVGGVIALVGLVRXVAQVSRXPNQDTT*
Ga0066672_102152272	3300005167	Soil	MKGKLITVFLGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS*
Ga0066677_100838503	3300005171	Soil	MKGKLIAVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALIGVIRLVVHAPSASKARS*
Ga0066673_107102971	3300005175	Soil	MKGKLITVFLGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALVGVIRLVIHASSASKARS*
Ga0066690_107364241	3300005177	Soil	MKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALIGVIRLVVHAPSASKARS*
Ga0066671_104499341	3300005184	Soil	WRSDENGGSKMKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS*
Ga0066675_101396141	3300005187	Soil	GVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS*
Ga0070709_104181601	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VLSWRSKENGDSKMKGKLITVVVGVLIAVVSWVPLWIIMARDPYAMPVALGLLAFAASFVGGVIASVGVVGLMIHALRASKARS*
Ga0070711_1005168301	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKGKLITVILGVCIAVASWAPLWIVEAYDRYAMPVGLGLFALAGSLVGGGVALVGVVGLVIQASRASKARS*
Ga0070741_100342734	3300005529	Surface Soil	MKAKLITAIVGVCIVPASWAPLWIVEAHDRYAMPVGLGLFAIAGSLVGGVIALVGIIGLIMQAARASKSRS*
Ga0070734_1000061048	3300005533	Surface Soil	MTGKLITIFVGAFIAVVSWVPLWIVEARDPQAMPVGLGLFAFAASFVGGVIALVGLVRLVIHAVRS*
Ga0070665_1012801412	3300005548	Switchgrass Rhizosphere	MKGRLITLFVGVLIAAGSWVPLLIVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARS*
Ga0068855_1001843772	3300005563	Corn Rhizosphere	MKGRLITLFVGVLIAAGSWVPLLIVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARP*
Ga0066693_100079892	3300005566	Soil	MKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALVGVIRLVIHASSASKARS*
Ga0070762_108273082	3300005602	Soil	KDGSHMKANLISIVVGIFIAVGSWVPLWIVEAYDRYAMPVGLGLFAIAASFVGGVIALVGLIRLVIHAARTQN*
Ga0070762_112597622	3300005602	Soil	MTGKLITIFVGAFIAVVSWVPLWIVEARDPQAMPVGLGLFAIAASFAGGVIAVVGIIRLVIQASRGPN*
Ga0068856_1016269681	3300005614	Corn Rhizosphere	GNGGSQMKGKLIAAIVGVCIAVASWAPLWIVEAYDRYAMPVGLGLFALAGSLVGGGVALVGVVGLVIQASRASKARS*
Ga0066789_101396321	3300005994	Soil	MKGKLIAVFVGVFIAVVSWMPLWIVEARDPYAMPVGLGLLAFAASCLGGVIALVGVIGLAIHLSRASKTRS*
Ga0066790_101248312	3300005995	Soil	MKGKLITIFVGVFISVVSWVPLWIVEERDPHAMPVGLGLLTFAASFVGGVIALVGLVRLVIQASRPPN*
Ga0066696_107603742	3300006032	Soil	GVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALIGVIRLVVHAPSASKARS*
Ga0075028_1002013032	3300006050	Watersheds	MAALEMKGELITVTVGVVIAVASWVPLWIVEAYDRHAMPVGLGLFAFAASFVGGVIALVGLIRLVIHASRASKLGTTEYSDGRS*
Ga0070712_1008289162	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKGKLIAVFAGAFIAAASWAPLLIVEAYDRYAMPVGLGLFALAGSFVGGVIALVGVIRLVIHASRASRTRS*
Ga0070765_1003990611	3300006176	Soil	MKAKLVAVFVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGIIALVGAIRLVVHASRAAKPRS*
Ga0066658_102997652	3300006794	Soil	MKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS*
Ga0066660_101289971	3300006800	Soil	SKMKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS*
Ga0066660_107742112	3300006800	Soil	MKGKLVTVLVGVFIALASWAPLWIIMARDRYAMPVALGLLTFAVSFVGGVVALVGVVSIVIHAFRASKASKRPDL*
Ga0073928_100550234	3300006893	Iron-Sulfur Acid Spring	MKANLISIVVGIFIAVGSWVPLWIVEAYDRYAMPVGLGLFAIAASFVGGVIALVGLIRLVIHAARTQN*
Ga0079219_100421111	3300006954	Agricultural Soil	MKGKLIAAIVGVCIAVASWAPLWIVEAYDRYAMPVGLGLFALAGSLVGGGVALVGVVGLVIQASRASKARS*
Ga0099792_101697221	3300009143	Vadose Zone Soil	MKANLITIFLGIFIAVVSWVPLWIVEARDRHAMPVGLGLFAIAASFVGCVIALVGLIRFVIHASRARKTPS*
Ga0075423_110971201	3300009162	Populus Rhizosphere	MKGKLITICVGVLIAVGSWVPIYIVEARDPYAMPVGLGLITFAASFVGGVIALVGLVRLVVQVSRPPN*
Ga0105238_100190875	3300009551	Corn Rhizosphere	MKGRLITLFVGVLIAAGSWVPLLVVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARP*
Ga0105857_12437331	3300009650	Permafrost Soil	MTGKLITIFVGVFIAVVSWVPLYIVEARDPQAMPVGLGLLTFAVSFVGGVIALVGLVRLVIHASRP*
Ga0105859_12013561	3300009651	Permafrost Soil	MTGKLITIFVGVFIAVVSWVPLYIVEARDPQAMPVGLGLLTFAVSFVGGMIALVGLVRQVIHASRS*
Ga0105854_10553642	3300009660	Permafrost Soil	MTGKLITIFVGVFIAVVSWVPLYIVEARDPQAMPVGLGLLTFAFSFVGGMIALVGLVRQVIHASRS*
Ga0134066_101606712	3300010364	Grasslands Soil	MKGKLIAVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALVGVIRLVIHASSASKARS*
Ga0136449_1005545673	3300010379	Peatlands Soil	MKANLISIAVGLFIAVASWVPLWIVEAYDRYAMPVGLGLFAIAASLVGGVIALVGLIRLVIQASRTQN*
Ga0137388_118326631	3300012189	Vadose Zone Soil	MAIKMKGKLIMIFVGAFIAVVSWAPLWIVEARDPQAMPVGLGLLTFAASFVGGVIALVGLIRLVIHASRASKSAS*
Ga0137360_102926551	3300012361	Vadose Zone Soil	VFIVAASWVPLLIVEAYDRYAMPVGLGLFALAGSFVGGMIALVGAIRLVIHAARASRTRS
Ga0137398_102206471	3300012683	Vadose Zone Soil	MKANLITIFLGVFIAVVSWVPLWIVEARDRHAMPVGLGLFAIAASFVGGVIALVGLIRFVIHASRARKTPS*
Ga0137413_113788062	3300012924	Vadose Zone Soil	MKGMLITVLAGVLIAAVSWIPLWIVAARDPYAMPFVLGLLALAGSFVGGVIAVVGVIKLVIQASRASKAPS*
Ga0137404_114643892	3300012929	Vadose Zone Soil	MTGKLITILVGVFIAIVSWVPLYIVEARDPQAMPVGLGLFTFAVSFVGGVIALVGLVRLVIHASRRGAS*
Ga0163162_101233634	3300013306	Switchgrass Rhizosphere	VGVLIAAGSWVPLLIVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARP*
Ga0181532_101009111	3300014164	Bog	MKANLISIVVGLFIAVASWVPLWIVEAYDRYAMPVGLGLFAIAASLVGGVIALVGL
Ga0181523_101161462	3300014165	Bog	MKANLISIVVGLFIAVASWVPLWIVEAYDRYAMPVGLGLFAIAASLVGGVIALVGLIRLVIQASRTQN*
Ga0182019_101558851	3300014498	Fen	MKGKLITMVVGVLIAVGAWAPLYIVEARDPYAMPVGLGLLTFAVSFVGGVIALVGLVRFVIHASRG*
Ga0182024_123801001	3300014501	Permafrost	MNMVGGEMKGKLIAIFVGVFIAIVSRVPLWIIEASDPYAMPVQLALLTFAVSFVGGVITVVGLIRLMIHTSR
Ga0182030_105821181	3300014838	Bog	MKTKLIMLLAGGFIAFGSWVPLWIVEARDPRSIPFELGLLTFAISFVGAVVALVGLIRLVIHAARTSN*
Ga0167642_10143992	3300015160	Glacier Forefield Soil	MKGKLIAVFVGAVIVAGSWAPLLIVEARDRYAMPVGLGLFAFAASFVGGVIALVGLIRLVIHASRASN*
Ga0167644_10719551	3300015206	Glacier Forefield Soil	RDNENGGSQMKAKLVAVFVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGVIALVGAIRLVIHASRAAKPRS*
Ga0137412_102137792	3300015242	Vadose Zone Soil	MKGKLIAVFVGVFIAAVSWVPLLIVEARDRHAMPVGLGLFAFACSLIGGVIALVGVIGLVIQALRASKARS*
Ga0181505_103851922	3300016750	Peatland	MRIPGQWRSNAKGASPMKANLISIVVGLFIAVASWVPLWIVEAYDRYAMPVGLGLFAIAASLVGGVIALVGLIRLVIQASRTQN
Ga0066669_102157812	3300018482	Grasslands Soil	MKGKLIAVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALIGVIRLVVHAPSASKARS
Ga0066669_113523531	3300018482	Grasslands Soil	SWRSDENGGSKMKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS
Ga0210403_101082152	3300020580	Soil	MKANLISIVVGVFIAVGSWVPLWIVEAYDRYAMPVGLGLFALAASFVGGVIALVGLIRLVIHAARTQN
Ga0210401_101407344	3300020583	Soil	MKANLISIVVGIFIAVGSWVPLWIVEAYDRYAMPVGLGLFAIAASFVGGVIALVGLIRLVIHASRTQN
Ga0210400_106575952	3300021170	Soil	MKANLISILVGVFIAVGSWVPLWIVEAYDRYAMPVGLGLFAIAASFVGGVIALVGFIRLVIHASRTSS
Ga0210396_102079133	3300021180	Soil	MAAIKMKAKLITAIVGVCIAAASWAPLMIVEAYDRYAMPVGLGLVAIAGSLVGGVIALVGVIGLVMQAARASKSRS
Ga0210396_116921221	3300021180	Soil	MKGKLITVVVGVLIAVVSWVPLWIIMARDPYAMPVALGLLAFAASFVGGVIASVGVVGL
Ga0210388_10000009272	3300021181	Soil	MKGNLISIFVGIFIAVVSWVPLWIVEAYDRYAMPVGLGLFAFAATFVGGIIALVGLIRLVIHS
Ga0210397_100783151	3300021403	Soil	MKAKLITAIVGVCIAVASWAPLWIVEAYDRYAMPVGLGLFAIAGSLVGGVIALVGVIGLMVQAARASKARP
Ga0210397_101627491	3300021403	Soil	MKEKLITAIVGVCIAAASWAPLMIVEAYDRYAMPVGLGLFAIVGSLVGGVIALVGVIGLVIQAARASRARS
Ga0210389_1000260513	3300021404	Soil	MLSWRRNENSGSKMKAKLVAVFVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGVIALVGAIRLVIHASRAAKPRS
Ga0210389_106854141	3300021404	Soil	MKGNLISIFVGIFIAVVSWVPLWIVEAYDRYAMPVGLGLFAFAATFVGGIIALVGLIRLVIHSSRASN
Ga0210389_113258781	3300021404	Soil	VCIAAASWAPLWIVEAYDRYAMPVGLGLVAIAGSLVGGVIAVIGVVGLVIEAARASKARS
Ga0210387_114590771	3300021405	Soil	MKAKLVAVFVGVLIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGIIALVGAIRLVIHASRAAKPRS
Ga0210387_116034482	3300021405	Soil	ITIFVGLLIAIVSWVPLWIIQARDPQSIPFTLGLVTFAVSFVGDVIALVGVIRLLIYAVRASKTRP
Ga0210384_102497063	3300021432	Soil	MKGKLIAVFVGVFIAVGSWAPLWIVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLVIHAARASRARSS
Ga0210384_107803821	3300021432	Soil	MTGKLITIFVGVFIAVVSWVPLYIVEARDPQAMPVGLGLLTFAASFVGGVIALVGLVRLVIHVSRP
Ga0210392_103007173	3300021475	Soil	MNGDSKTKGKLIALFAGVFIAVVAWVPLWIVEARDPYAMPVGLGLLVFAASFAGGVIALVGAVGLVMQALRASKARS
Ga0210402_102816144	3300021478	Soil	MKAKLITAIVGVCTAAASWAPLMIVEAYDRYAMPVGLGLVAIAGSLVGGVIALVGVIGLVVQAARASKERS
Ga0210402_105959281	3300021478	Soil	GMKGKLIALFAGVFIAVVAWVTLWIVEARDPYAMPVGLGLFAFAASFAGGVIALVGAVGLVIQALRASKARS
Ga0210410_100200544	3300021479	Soil	VRVLSWRGNENGGSQMKAKLVTVFVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGVIALVGAIRLVIHPHALQRRDPDQ
Ga0212123_100637004	3300022557	Iron-Sulfur Acid Spring	MKANLISIVVGIFIAVGSWVPLWIVEAYDRYAMPVGLGLFAIAASFVGGVIALVGLIRLVIHAARTQN
Ga0207671_101919803	3300025914	Corn Rhizosphere	MKGRLITLFVGVLIAAGSWVPLLIVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARP
Ga0207663_106523351	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SQMKGKLITVILGVCIAVASWAPLWIVEAYDRYAMPVGLGLFALAGSLVGGGVALVGVVGLVIQASRASKARS
Ga0207694_102875082	3300025924	Corn Rhizosphere	MKGRLITLFVGVLIAAGSWVPLLVVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARP
Ga0207639_113011512	3300026041	Corn Rhizosphere	VGVLIAAGSWVPLLVVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARP
Ga0207702_107679592	3300026078	Corn Rhizosphere	MKGKLIAAIVGVCIAVASWAPLWIVEAYDRYAMPVGLGLFALAGSLVGGGVALVGVVGLVIQASRASKARS
Ga0209350_11263561	3300026277	Grasslands Soil	VWYRGGATRTAASKMKGKLITVFLGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS
Ga0209890_100289472	3300026291	Soil	MKGKLIAVFVGVFIAVVSWMPLWIVEARDPYAMPVGLGLLAFAASCLGGVIALVGVIGLAIHLSRASKTRS
Ga0209839_101529191	3300026294	Soil	VGVFISVVSWVPLWIVEERDPHAMPVGLGLLTFAASFVGGVIALVGLVRLVIQASRPPN
Ga0209153_12667431	3300026312	Soil	VVSWRSDENGGSKMKGKLITVFVGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS
Ga0209471_11209312	3300026318	Soil	MKGKLITVFLGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS
Ga0209473_100242010	3300026330	Soil	MKGKLITVFLGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAGSFVGGVIALVGVIRLVIHASSASKARS
Ga0209808_10257921	3300026523	Soil	MKGKLITVFLGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIH
Ga0209805_10968644	3300026542	Soil	VFLGVFIVAVSWVPLLIVAARDRYAMPVGLGLLAFAVIALVGVIRLVIHASSASKARS
Ga0209626_11467921	3300027684	Forest Soil	FVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGIIALVGAIRHVVHASRAAKPRS
Ga0209060_1000047262	3300027826	Surface Soil	MTGKLITIFVGAFIAVVSWVPLWIVEARDPQAMPVGLGLFAFAASFVGGVIALVGLVRLVIHAVRS
Ga0209624_101183552	3300027895	Forest Soil	MKAKLVAVFVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGIIALVGAIRHVVHASRAAKPRS
Ga0209488_101818031	3300027903	Vadose Zone Soil	MKANLITIFLGVFIAVVSWVPLWIVEARDRHAMPVGLGLFAIAASFVGGVIALVGLIRFVIHASRARKTPS
Ga0209006_100050237	3300027908	Forest Soil	MLSWRRNENGGSQMKAKLVTVFVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGVIALVGAIRLVIHASRAAKPRS
Ga0268266_106512552	3300028379	Switchgrass Rhizosphere	MKGRLITLFVGVLIAAGSWVPLLIVEAYDRYAMPVGLGLFALAGSLVGGVIALVGAIRLAIDALRAAKARS
Ga0265318_103144632	3300028577	Rhizosphere	MKRKLITIFAGVLIAVGSWVPLYIVEARDPYAMPVGLGLLTFAVSSVGGVIALVGLVRLVMQASRTPN
Ga0308309_104831362	3300028906	Soil	MKAKLVAVFVGVFIAAASWLPLLIVEARDRYAMPVGLGLFAFAGSFVGGVIAVVGAIRLVIHVSRAAKPRS
Ga0265330_100111131	3300031235	Rhizosphere	MKRKLITIFAGVLIAVGSWVPLYIVEARDPYAMPVGLGLLTFAVSFVGGVIALVGLFRLVMQASRTPN
Ga0265340_100268703	3300031247	Rhizosphere	AGVLIAVGSWVPLYIVEARDPYAMPVGLGLLTFAVSSVGGVIALVGLVRLVMQASRTPN
Ga0265339_100357183	3300031249	Rhizosphere	LITIFAGVLIAVGSWVPLYIVEARDPYAMPVGLGLLTFAVSSVGGVIALVGLVRLVMQASRTPN
Ga0265339_102959251	3300031249	Rhizosphere	MKRKLITIFAGVLIAVGSWVPLYIVEARDPYAMPVGLGLLTFAVSFVGGVIALVGL
Ga0170820_130422951	3300031446	Forest Soil	MTGKLITIFVGAFIAVVSWVPLWIVEARDPQAMPVGLGLFAIAASFAGGVIAVVGIIRLVIQASRGPN
Ga0307508_10000003268	3300031616	Ectomycorrhiza	MGIASLHPSYALSQRRNENGGSKMKAKLIAVFVGVFIAVVSWVPLWIVEARDPYAMPVGLGLLAFAASCIGGVIALVGAIGLAIHVSRAAKTRS
Ga0310686_1035779652	3300031708	Soil	VVIFSGVFDEHGGDEMKGKLIAIFVGVFIAIVSWVPLWIIEASDPYAMPVQVALLTFAVSFVGGVITVVGLIRLVIHTSRISKTPS
Ga0265314_100549283	3300031711	Rhizosphere	MKRKLITIFAGVLIAVGSWVPLYIVEARDPYAMPVGLGLLTFAVSSVGGVIALVGLVRLVMQASRTSN
Ga0302321_1017478322	3300031726	Fen	DLILIAVGVFIAVASWGPLWWVEKSDPYAMPVGLGLLTFAASFAGGIIALVGLVRLVIRFAKASS
Ga0302322_1032737591	3300031902	Fen	MKGNLILIAVGVFIAVASWGPLWWVEKSDPTAMPVGLGLLTFAASFAGGIIALVGLVRLVIRFARST
Ga0308176_117967091	3300031996	Soil	VEVHGNGGSQMKGKLITAIVGVCIAVASWAPLWIVEAYDRYAMPVGLGLFALAGSLVGGGVALVGVVGLVIQASRASKARS
Ga0311301_107929942	3300032160	Peatlands Soil	MKANLISIAVGLFIAVASWVPLWIVEAYDRYAMPVGLGLFAIAASLVGGVIALVGLIRLVIQASRTQN
Ga0316229_13404551	3300032676	Freshwater	SSRQDEAKVGSGMKATLITILVGVFVAVVSWVPLWIVETRDPYAMPIGLGLLTFAASLAGGAVALVDLIRLAIRALRA
Ga0334847_026184_1_168	3300033826	Soil	MKGKLITMVVGVLIAVGAWAPLYIVEAGDPYAMPVGLGLLTFAVSFVGGVIALVGL
Ga0372943_0000002_698210_698416	3300034268	Soil	MRGNLITVFLGGLIAIVSWVPLWIIEARDPYAMPFRLGLLTFAASLVGGIIALVGLTRLVMEAFRNRN