Metagenome Family F085981

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085981
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	78 residues
Representative Sequence	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA
Number of Associated Samples	98
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.13 %
% of genes near scaffold ends (potentially truncated)	28.83 %
% of genes from short scaffolds (< 2000 bps)	90.09 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (81.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (8.108 % of family members)
Environment Ontology (ENVO)	Unclassified (29.730 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.243 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.33% β-sheet: 23.30% Coil/Unstructured: 54.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.108.1.3: Autoinducer synthetase	d1ro5a1	1ro5	0.6605
d.108.1.0: automated matches	d6bvca_	6bvc	0.66013
c.69.1.0: automated matches	d3fcya_	3fcy	0.65512
d.108.1.1: N-acetyl transferase, NAT	d1s3za1	1s3z	0.64727
d.108.1.3: Autoinducer synthetase	d1kzfa_	1kzf	0.64696

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00226	DnaJ	24.32
PF00166	Cpn10	3.60
PF01741	MscL	1.80
PF06778	Chlor_dismutase	0.90
PF13442	Cytochrome_CBB3	0.90
PF07311	Dodecin	0.90
PF14525	AraC_binding_2	0.90
PF12704	MacB_PCD	0.90
PF00484	Pro_CA	0.90
PF05099	TerB	0.90
PF07676	PD40	0.90
PF12849	PBP_like_2	0.90
PF04298	Zn_peptidase_2	0.90
PF13650	Asp_protease_2	0.90
PF09361	Phasin_2	0.90
PF03567	Sulfotransfer_2	0.90
PF02586	SRAP	0.90
PF00982	Glyco_transf_20	0.90
PF14067	LssY_C	0.90
PF00027	cNMP_binding	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	3.60
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.80
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.90
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.90
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.90
COG2738	Zn-dependent membrane protease YugP	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	0.90
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.90
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.58 %
Unclassified	root	N/A	18.02 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	63.06 %
Unclassified	root	N/A	18.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	60.36 %
Unclassified	root	N/A	18.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	36.04 %
Unclassified	root	N/A	18.02 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	9.01 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	36.04 %
Unclassified	root	N/A	18.02 %
Dichotomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium	4.50 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2.70 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.90 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	36.04 %
Unclassified	root	N/A	18.02 %
Dichotomicrobium thermohalophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	4.50 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2.70 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.90 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	36.04 %
Unclassified	root	N/A	18.02 %
Dichotomicrobium thermohalophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	4.50 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2.70 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.90 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	36.04 %
Unclassified	root	N/A	18.02 %
Dichotomicrobium thermohalophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	4.50 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2.70 %
Rhizobium sp. 57MFTsu3.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	0.90 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908041\|P3_CLC_ConsensusfromContig128713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	865	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100254465	Not Available	577	Open in IMG/M
3300001213\|JGIcombinedJ13530_107170499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300004058\|Ga0055498_10093710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	599	Open in IMG/M
3300004479\|Ga0062595_100011480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2945	Open in IMG/M
3300004479\|Ga0062595_101757533	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300004479\|Ga0062595_102108391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300005093\|Ga0062594_102774557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	544	Open in IMG/M
3300005206\|Ga0068995_10056777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	719	Open in IMG/M
3300005330\|Ga0070690_100452814	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300005334\|Ga0068869_101353995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	629	Open in IMG/M
3300005336\|Ga0070680_100544107	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300005337\|Ga0070682_101350100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	608	Open in IMG/M
3300005338\|Ga0068868_101709696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	593	Open in IMG/M
3300005340\|Ga0070689_100699947	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300005441\|Ga0070700_100530881	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300005457\|Ga0070662_101321637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	621	Open in IMG/M
3300005530\|Ga0070679_101699466	Not Available	579	Open in IMG/M
3300005547\|Ga0070693_101426544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300005578\|Ga0068854_100832310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	807	Open in IMG/M
3300005713\|Ga0066905_100830758	Not Available	803	Open in IMG/M
3300005842\|Ga0068858_102410456	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300005937\|Ga0081455_10008252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10858	Open in IMG/M
3300006041\|Ga0075023_100219806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	743	Open in IMG/M
3300006041\|Ga0075023_100574758	Not Available	520	Open in IMG/M
3300006047\|Ga0075024_100415258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	688	Open in IMG/M
3300006050\|Ga0075028_100499583	Not Available	710	Open in IMG/M
3300006057\|Ga0075026_100625994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	635	Open in IMG/M
3300006059\|Ga0075017_100936894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	673	Open in IMG/M
3300006175\|Ga0070712_100898911	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300006237\|Ga0097621_100829379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	858	Open in IMG/M
3300006358\|Ga0068871_101588720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	619	Open in IMG/M
3300006635\|Ga0075526_1014031	Not Available	567	Open in IMG/M
3300006792\|Ga0075530_1019443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2604	Open in IMG/M
3300009053\|Ga0105095_10692333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	569	Open in IMG/M
3300009078\|Ga0105106_10447464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	930	Open in IMG/M
3300009090\|Ga0099827_11734435	Not Available	544	Open in IMG/M
3300009146\|Ga0105091_10262989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	835	Open in IMG/M
3300009148\|Ga0105243_10278500	All Organisms → cellular organisms → Bacteria → Proteobacteria	1505	Open in IMG/M
3300009153\|Ga0105094_10265508	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300009166\|Ga0105100_10109028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1629	Open in IMG/M
3300009174\|Ga0105241_10250036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	1503	Open in IMG/M
3300009176\|Ga0105242_11021679	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300009529\|Ga0114919_10464837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	875	Open in IMG/M
3300009545\|Ga0105237_12690424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	508	Open in IMG/M
3300009553\|Ga0105249_10709123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	1067	Open in IMG/M
3300009807\|Ga0105061_1042312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300009817\|Ga0105062_1032868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	911	Open in IMG/M
3300009837\|Ga0105058_1054042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	902	Open in IMG/M
3300010371\|Ga0134125_10422553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1478	Open in IMG/M
3300010371\|Ga0134125_11371254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	771	Open in IMG/M
3300010373\|Ga0134128_10684189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	1139	Open in IMG/M
3300010375\|Ga0105239_10469335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1429	Open in IMG/M
3300010375\|Ga0105239_10856582	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300012931\|Ga0153915_13337203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	521	Open in IMG/M
3300012986\|Ga0164304_10934264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300013104\|Ga0157370_10658223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Dichotomicrobium → Dichotomicrobium thermohalophilum	957	Open in IMG/M
3300013307\|Ga0157372_11551941	Not Available	763	Open in IMG/M
3300013307\|Ga0157372_13163064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	525	Open in IMG/M
3300014318\|Ga0075351_1009597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1354	Open in IMG/M
3300014325\|Ga0163163_12718853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	552	Open in IMG/M
3300014326\|Ga0157380_11043055	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300014745\|Ga0157377_11717628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	507	Open in IMG/M
3300015373\|Ga0132257_102362988	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300015374\|Ga0132255_100685001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1521	Open in IMG/M
3300015374\|Ga0132255_101297069	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300015374\|Ga0132255_104259548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	607	Open in IMG/M
3300017792\|Ga0163161_10871898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	761	Open in IMG/M
3300017924\|Ga0187820_1096338	Not Available	847	Open in IMG/M
3300017928\|Ga0187806_1057664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1190	Open in IMG/M
3300017955\|Ga0187817_10033428	Not Available	3126	Open in IMG/M
3300017961\|Ga0187778_10800738	Not Available	643	Open in IMG/M
3300017973\|Ga0187780_10224388	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300017974\|Ga0187777_10551131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	809	Open in IMG/M
3300017974\|Ga0187777_10577300	Not Available	791	Open in IMG/M
3300017974\|Ga0187777_10853701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	653	Open in IMG/M
3300018028\|Ga0184608_10124580	Not Available	1095	Open in IMG/M
3300018060\|Ga0187765_11145369	Not Available	542	Open in IMG/M
3300018064\|Ga0187773_10855142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300018422\|Ga0190265_10215708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1943	Open in IMG/M
3300018429\|Ga0190272_10060540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2244	Open in IMG/M
3300018429\|Ga0190272_10154929	Not Available	1584	Open in IMG/M
3300025312\|Ga0209321_10405798	Not Available	638	Open in IMG/M
3300025325\|Ga0209341_10694980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	784	Open in IMG/M
3300025899\|Ga0207642_11164550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	500	Open in IMG/M
3300025904\|Ga0207647_10777031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300025925\|Ga0207650_10899200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	752	Open in IMG/M
3300025942\|Ga0207689_10097755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2412	Open in IMG/M
3300025981\|Ga0207640_11129368	Not Available	694	Open in IMG/M
3300026067\|Ga0207678_10556051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1004	Open in IMG/M
3300026075\|Ga0207708_10630050	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300026095\|Ga0207676_11864216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	600	Open in IMG/M
3300026142\|Ga0207698_11517495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	685	Open in IMG/M
3300026865\|Ga0207746_1007539	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300027010\|Ga0207839_1026327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	660	Open in IMG/M
3300027561\|Ga0209887_1029796	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300027577\|Ga0209874_1153005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	518	Open in IMG/M
3300027680\|Ga0207826_1078647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	909	Open in IMG/M
3300027723\|Ga0209703_1329787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	536	Open in IMG/M
3300027910\|Ga0209583_10525562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	589	Open in IMG/M
3300027915\|Ga0209069_10080290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1557	Open in IMG/M
3300027915\|Ga0209069_10203224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	1011	Open in IMG/M
3300030006\|Ga0299907_10796205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	713	Open in IMG/M
3300030619\|Ga0268386_10073444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2672	Open in IMG/M
3300031228\|Ga0299914_10556048	Not Available	985	Open in IMG/M
3300031274\|Ga0307442_1011294	All Organisms → cellular organisms → Bacteria	3575	Open in IMG/M
3300031949\|Ga0214473_10231308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2130	Open in IMG/M
3300031949\|Ga0214473_10857679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	973	Open in IMG/M
3300033433\|Ga0326726_10852898	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.47%
Host-Associated	Host-Associated	31.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.05%
Plants	Host-Associated → Plants	31.53%
Aquatic	Environmental → Aquatic	23.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.41%
Freshwater	Environmental → Aquatic → Freshwater	9.91%
Sediment	Environmental → Aquatic → Sediment	9.01%
Marine	Environmental → Aquatic → Marine	4.50%
Roots	Host-Associated → Plants → Roots	2.70%
Peat	Environmental → Terrestrial → Peat	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.82%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.31%
Sand	Environmental → Terrestrial → Soil → Sand	4.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.60%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.70%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.90%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.70%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.90%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.90%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006635	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-three	Environmental	Open in IMG/M
3300006792	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_CLC_01970150	2124908041	Soil	MTHSDLMKVDVQGPDIFVAMRGTCFRVKYRKQEAPWLVAREYGPDDPGAMVTLSEFRALAWAAANDKARELGWVV
INPhiseqgaiiFebDRAFT_1002544652	3300000364	Soil	MTHSDRIRAEVQGPDIFVAMRGTCLRMKYRKEDAPWLIAREYGPEDPDAPVTLSEFRALAWQQLR*
JGIcombinedJ13530_1071704992	3300001213	Wetland	VSVGMTHSDMKVEVHRPCIVVGMRGTCLRVTYLKGPAPWLVPCEYGPDDPDATITLSEFRALAWALANDKARELGWIV*
Ga0055498_100937101	3300004058	Natural And Restored Wetlands	MIHSDLVRIEVQGADILVAMRGTCFRVKYRKQDAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0062595_1000114802	3300004479	Soil	MDKQHLRVEVHGHDVMIAMRGTCFRLIYRKQEAPWLVLHEQGPDDPEATITLTEFRALAWEAANEKATELGWIA*
Ga0062595_1017575331	3300004479	Soil	MLHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDAMITLSEFRALAWAAAND
Ga0062595_1021083911	3300004479	Soil	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQGAPWLSVQEYGPDDPDAMITLSEFRALAWAAAND
Ga0062594_1027745571	3300005093	Soil	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQGAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0068995_100567772	3300005206	Natural And Restored Wetlands	MRTNAGLRGRSAMIHSDLVRIEVQGADILVAMRGTCFRVKYRKQDAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0070690_1004528142	3300005330	Switchgrass Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKAREL
Ga0068869_1013539951	3300005334	Miscanthus Rhizosphere	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWL
Ga0070680_1005441071	3300005336	Corn Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQGAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0070682_1013501002	3300005337	Corn Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWA
Ga0068868_1017096961	3300005338	Miscanthus Rhizosphere	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0070689_1006999471	3300005340	Switchgrass Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0070700_1005308812	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKA
Ga0070662_1013216371	3300005457	Corn Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0070679_1016994661	3300005530	Corn Rhizosphere	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGVLRIGLHHPRS*
Ga0070693_1014265442	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDK
Ga0068854_1008323102	3300005578	Corn Rhizosphere	MWTCAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0066905_1008307583	3300005713	Tropical Forest Soil	MTHSNLRVEVQGTHILVVLRGTCFRAKYRKQNAPWLATEEYGPDDPDAPMSLSEFRSLAWTAANEAAQ
Ga0068858_1024104562	3300005842	Switchgrass Rhizosphere	MIHSDLVRIEVQGADISVAMRGTCFRVKYRKEEAPWLTMQEHGPDDPDAMITLSEFRALAWAAAND
Ga0081455_1000825213	3300005937	Tabebuia Heterophylla Rhizosphere	MMSGRMPDAGEDRMTHSDLLKVEVQGADILVALRGTCFRVKYRKREAPWLIAQEYGPDDPDAPVTLSEFRALAWTAANDKARELGWLG*
Ga0075023_1002198061	3300006041	Watersheds	LPAMTSGRMPDAGRIQMTHSDLVKVDVQGPDIFVAMRGTCFRVKYRKQEAPWLVAREYGPDDPGAMVTLSEFRALAWAAANDKARELGWIV*
Ga0075023_1005747582	3300006041	Watersheds	MTHSDFVKVDVQGPDIVVAMRGTCFRVKYQKQAAPWLIAREYGPDDPGARVTLSEFRALAWAAANTKARELGWIV*
Ga0075024_1004152582	3300006047	Watersheds	MTHSDLVKVDVQGPDIFVAMRGTCFRVKYRKQEAPWLVAREYGPDDPGAMVTLSEFRALAWAAANDKARELGWIV*
Ga0075028_1004995832	3300006050	Watersheds	MTHSDFVKVDVQGPDIVVAMRGTCFRVKYQKQAAPWLIAREYGPDDPRARVTLSEFRALAWAAANTKARELGWIV*
Ga0075026_1006259941	3300006057	Watersheds	MTHSDLMKVEVQGPEILVAMRGTCLSMKYRKQEAPWLVAQDYGPDDPGASVTLAEFRALAWVAANDKAKELGWIV*
Ga0075017_1009368942	3300006059	Watersheds	MTHSDLKIEVQRPYILVGMRGTCFRVKYLKGPAPWLAPYEYGPNDPDAKITLSEFQALAWAVANDKARELGWIV*
Ga0070712_1008989111	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAA
Ga0097621_1008293793	3300006237	Miscanthus Rhizosphere	RQSMWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0068871_1015887202	3300006358	Miscanthus Rhizosphere	RNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0075526_10140311	3300006635	Arctic Peat Soil	MRGGDHMIHSDLVKVEVQGADIFAMRGTCFRVKYRKQEAPWLIAQEYGPDDPGATVTLSEFRALAWA
Ga0075530_10194435	3300006792	Arctic Peat Soil	MTHSDLVKVEVQGADISVAMRGTCFRVKYRKQEAPWLVAREYGPDDPDATISLSEFRALAWAAANDKARELGWLV*
Ga0105095_106923331	3300009053	Freshwater Sediment	MPDAGEDRMTHSDLVRVEVQGADILVAMRGTCFRMKYRKQQAPWLIAQEYGPDDPGATITLSEFRALAWAAANDKARELGWLV*
Ga0105106_104474641	3300009078	Freshwater Sediment	MWAYAGLRGRIAMTHSDLVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0099827_117344351	3300009090	Vadose Zone Soil	MTHSDLIKVEIQGPDIFVAMRGTCFRVKYRKQAAPWLIAQEYGPDDPGAAVTLSEFRALAWAAANHKARELGWIV*
Ga0105091_102629892	3300009146	Freshwater Sediment	MPDAGEDGMTHSDLVRVEVQGADILVAMRGTCFRMKYRKQEAPWLIAQEYGPDDPGATITLSEFRALAWAAANDKARELGWLV*
Ga0114129_114244563	3300009147	Populus Rhizosphere	MNHSNLTVEVQGTHILVVLRGTCFRAKYRKQDAPWLVTEAYGPDDPDAPMSLSEFRSLAWAAANDAAH
Ga0105243_102785002	3300009148	Miscanthus Rhizosphere	MWTYASLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0105094_102655082	3300009153	Freshwater Sediment	MPACGGRIAMTHSDLVRIEVQGAEILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0105100_101090283	3300009166	Freshwater Sediment	MWAYAGLRGRIAMTHSDLVRIEVQGAEILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0105104_106270162	3300009168	Freshwater Sediment	MTHSNLTVEVQGTHILVVLRGTCFRAKYRKQDAPWLATEEYGPDDPGAPMSLSEFRSLAWAAANDAAQQ
Ga0105241_102500364	3300009174	Corn Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLT*
Ga0105242_110216791	3300009176	Miscanthus Rhizosphere	MWTYAGLRGRNRTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGVLRIGLHHPRS
Ga0114919_104648373	3300009529	Deep Subsurface	MADAGEDHMIHSDLVKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLV*
Ga0105237_126904242	3300009545	Corn Rhizosphere	MIHSDLVRIEVQGADILVAMRGTCFRVKYRKQGAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0105249_107091232	3300009553	Switchgrass Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADISVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0105061_10423122	3300009807	Groundwater Sand	MPDAGEDRMTHSDLVKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLI*
Ga0105062_10328681	3300009817	Groundwater Sand	MTQWDLMKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPGATITLSEFRALAWAAANDKARELGWLV*
Ga0105058_10540422	3300009837	Groundwater Sand	MTQWDLMKVEVQGADIFVAMRGTCFRVKYRKKEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLI*
Ga0134125_104225532	3300010371	Terrestrial Soil	MIHSELVRIEVQGADSLVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0134125_113712541	3300010371	Terrestrial Soil	MKTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0134128_106841892	3300010373	Terrestrial Soil	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALACE*
Ga0105239_104693351	3300010375	Corn Rhizosphere	MWTCAGLRGKNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0105239_108565822	3300010375	Corn Rhizosphere	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0153915_133372031	3300012931	Freshwater Wetlands	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQDAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0164304_109342642	3300012986	Soil	WTCAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0157370_106582231	3300013104	Corn Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADISVAMRGTCFRVKYRKEEAPWLTMQEHGRDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0157372_115519411	3300013307	Corn Rhizosphere	MTHSELVRIEVQGDDILVAMRGTCFQVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKA
Ga0157372_131630641	3300013307	Corn Rhizosphere	LRGRIAIFHSDLVRIEVQGADISVAMRGTCFRVKYRKEEAPWLTMQEHGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0075351_10095972	3300014318	Natural And Restored Wetlands	MPACGGRIAMTHSDLVRIEVQGADILVAMRGTCFRVKYRKQDAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA*
Ga0163163_127188532	3300014325	Switchgrass Rhizosphere	MIHSDLVRIEVQGADISVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0157380_110430552	3300014326	Switchgrass Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRTLAWAAANDKARELGWLA*
Ga0157377_117176281	3300014745	Miscanthus Rhizosphere	MWTCAGLRRRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA*
Ga0132257_1023629883	3300015373	Arabidopsis Rhizosphere	ARNAGEADLTHSERIRAEVQGPDIFVAMRGTCLRMKYRKEDAPWLVAREYGPDDPDAPVTLSEFRALAWAAANAKARELGWIV*
Ga0132255_1006850012	3300015374	Arabidopsis Rhizosphere	MKIEIRGPDIFVAMRGTCFRMKYRKQEAPWLVALDYGPDDPDARVTQSEFRALAWAAANTKARELGWIV*
Ga0132255_1012970692	3300015374	Arabidopsis Rhizosphere	MWTYAGLRGMNMNHTELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLT*
Ga0132255_1042595482	3300015374	Arabidopsis Rhizosphere	MIHSDLVRIEVQGADISVAMRGTCFRVKYRKEEAPWLTMQEHGPDDPDAMITLSEFRALAWAAANDKARELGWLT*
Ga0163161_108718981	3300017792	Switchgrass Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA
Ga0187820_10963381	3300017924	Freshwater Sediment	MTHSDRIKAEVQGPDIFVAMRGTCFRMTYRKGDAPWLVVRAYGPDDPGAPAILSEFRALAWAAAKDKARELGWIV
Ga0187806_10576642	3300017928	Freshwater Sediment	MTHSDRIKAEVQGPDIFVAMRGTCFRMTYRKGDAPWLVVRDYGPDDPGAPATLSEFRALAWAAAKDKARELGWIV
Ga0187817_100334283	3300017955	Freshwater Sediment	MTHSDRIKAEVQGPDIFVAMRGTCFRMTYRKGDAPWLVVRAYGPDDPGALAILSEFRALAWAAAKDKARELGWIV
Ga0187778_108007381	3300017961	Tropical Peatland	MPECGEADMTDSDRIKAEVQGPDIFVAMRGTCFRMTYRKGDAPWLVVRDYGPDDPGAPATLSEFRALAWAAAKDKARELGWIV
Ga0187780_102243882	3300017973	Tropical Peatland	MTDSDRIKAEVQGPDIFVAMRGTCFRMTYRKGDAPWLVVRDYGPDDPGAPATLSEFRALAWAAAKDKARELGWIV
Ga0187777_105511312	3300017974	Tropical Peatland	MTHSDLVKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPDATITLSEFRVLAWAAANDKARELGWLI
Ga0187777_105773001	3300017974	Tropical Peatland	MTDSDRIKAEVEGPDIFIAMRGTCFRMTYRKGDAPWLVVRDYGPDDPGAPATLSEFRALAWAAAKDKARELGWIV
Ga0187777_108537011	3300017974	Tropical Peatland	DLMTHTDLLKVEVQGADILVALRGTCLSVKYRKKEAPWLIAQAYGPEDPDAPVTLSEFRALAWAAANDKARELGWLA
Ga0184608_101245802	3300018028	Groundwater Sediment	MPERGETPNAGKLKMTHSDLIKVEVHVPDIFVAMRGTCLRMKYRKQEAPWLVALDYGPDDPGARITQSEFRALAWAAANTKARELGWIA
Ga0187765_111453691	3300018060	Tropical Peatland	NSGKWELAHVARRHVGIKSSVLPAITRGRMPECGEADMTDSDRIKAEVQGPDIFVAMRGTCFRMTYRKGDAPWLVVRDYGPDDPGAPATLSEFRALAWAAAKDKARELGWIV
Ga0187773_108551421	3300018064	Tropical Peatland	MTHLDVKVEVQRPYILVGMRGTCFRVKYLKGPAPWLAPYEYGPDDPDAKITLSEFRALAWAVANDKARELGWIV
Ga0190265_102157083	3300018422	Soil	MTHSDLVKVEVQGADISVAMRGTCFRVKYRKQEAPWLVAREYGPDDPDATISLSEFRALAWAAANDKARELGWLV
Ga0190272_100605405	3300018429	Soil	MIHSDVVKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLV
Ga0190272_101549292	3300018429	Soil	MTHWDLVKVEVQGADIFVAMRGTCFRMKYRKQEAPWLIAQEYGPDDPDATITLSKFRALAWAAANDKARELGWLA
Ga0209321_104057981	3300025312	Soil	MTHSNLTVEVQGTHILVVLRGTCFRAKYRKQDAPWLATEEYGPDDPGAMISLSEFRNLAWAAANDTAP
Ga0209341_106949801	3300025325	Soil	MTHSDLVKVEVQGADIFVAMRGTCFRVKYRKKEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGW
Ga0207642_111645502	3300025899	Miscanthus Rhizosphere	EVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA
Ga0207647_107770311	3300025904	Corn Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQGAPWLSVQEYGPDDPDAMITLSEFRALAWAAA
Ga0207650_108992003	3300025925	Switchgrass Rhizosphere	IEVQGADILVAMRGTCFRVKYRKQGAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA
Ga0207689_100977553	3300025942	Miscanthus Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA
Ga0207640_111293682	3300025981	Corn Rhizosphere	MWTCAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQAAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA
Ga0207678_105560512	3300026067	Corn Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQGAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA
Ga0207708_106300501	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MWTYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKA
Ga0207676_118642161	3300026095	Switchgrass Rhizosphere	MEVGQWQSNQRHYAGLRGRNMTHSELVRIEVQGADILVAMRGTCFRMKYRKQAAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA
Ga0207698_115174951	3300026142	Corn Rhizosphere	MTHSELVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDAMITLSEFRALAWAAANDKARELGWLA
Ga0207746_10075393	3300026865	Tropical Forest Soil	MTHLDLKVEVQRPYILVGMRGTCFRVKYLKGPAPWLAPYEYGPDDPDAKITLSEFRALAWAVANDKARELRWIV
Ga0207839_10263272	3300027010	Tropical Forest Soil	MTHLDLKVEVQRPYILVGMRGTCFRVKYLKGPAPWLAPYEYGPDDPDAKITLSEFRALAWAVANDKARELGWIV
Ga0209887_10297961	3300027561	Groundwater Sand	MTHSDLVKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLV
Ga0209874_11530051	3300027577	Groundwater Sand	MTQWDLMKVEVQGADIFVAMRGTCFRVKYRKKEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLV
Ga0207826_10786471	3300027680	Tropical Forest Soil	VRLRMTHLDLKVEVQRPYILVGMRGTCFRVKYLKGPAPWLAPYEYGPDDPDAKITLSEFRALAWAVANDKARELGWIV
Ga0209703_13297871	3300027723	Freshwater Sediment	MTHSDLVRIEVQGAEILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARQLGWL
Ga0209583_105255621	3300027910	Watersheds	MTNSDLVRIEVQGAEILVAMRSTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA
Ga0209069_100802902	3300027915	Watersheds	MTSGRMPDAGRIQMTHSDLVKVDVQGPDIFVAMRGTCFRVKYRKQEAPWLVAREYGPDDPGAMVTLSEFRALAWAAANDKARELGWIV
Ga0209069_102032241	3300027915	Watersheds	MTHSDFVKVDVQGPDIVVAMRGTCFRVKYQKQAAPWLIAREYGPDDPGARVTLSEFRALAWAAANTKARELGWIV
Ga0299907_107962051	3300030006	Soil	IHSDLVKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLV
Ga0268386_100734442	3300030619	Soil	MIHSDLVKVEVQGADIFVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKARELGWLV
Ga0299914_105560481	3300031228	Soil	MTHSSLRVEVLGNTIRVVMRGTCFRARYRKQEAPWLATDEYGPDDPDATVSFSEFRNLAWQAANNKARQLG
Ga0307442_10112943	3300031274	Salt Marsh	MTHSNLKVEVQGSYILVAMRGTCLRVKYRKQEAPWLATEEYGPDDPEATITPSEFRALAWAAANGAARELGWISGYDKLHESVKSANPS
Ga0214473_102313084	3300031949	Soil	MTQWDLMKVEVQGADIFVAMRGTCFRVKYRKKEAPWLIAQEYGPDDPDATITLSEFRALAWAAANDKACELGWLI
Ga0214473_108576791	3300031949	Soil	MTHSDLVRVEVQGADISVAMRGTCFRVKYRKQEAPWLIAQEYGPDDPGATITLSEFRALAWAAANDKARELGWLV
Ga0326726_108528982	3300033433	Peat Soil	EETMIHSDLVRIEVQGADILVAMRGTCFRVKYRKQEAPWLSVQEYGPDDPDATITLSEFRALAWAAANDKARELGWLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085981

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences