Metagenome / Metatranscriptome Family F085979

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085979
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	61 residues
Representative Sequence	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVR
Number of Associated Samples	100
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.10 %
% of genes from short scaffolds (< 2000 bps)	93.69 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.559 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.721 % of family members)
Environment Ontology (ENVO)	Unclassified (29.730 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.342 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF08386	Abhydrolase_4	3.60
PF00196	GerE	1.80
PF13302	Acetyltransf_3	1.80
PF13374	TPR_10	1.80
PF12697	Abhydrolase_6	1.80
PF07690	MFS_1	1.80
PF01527	HTH_Tnp_1	1.80
PF00141	peroxidase	1.80
PF08734	GYD	0.90
PF02687	FtsX	0.90
PF01872	RibD_C	0.90
PF00685	Sulfotransfer_1	0.90
PF07676	PD40	0.90
PF14269	Arylsulfotran_2	0.90
PF02796	HTH_7	0.90
PF03861	ANTAR	0.90
PF03596	Cad	0.90
PF00589	Phage_integrase	0.90
PF01751	Toprim	0.90
PF01609	DDE_Tnp_1	0.90
PF06445	GyrI-like	0.90
PF01636	APH	0.90
PF00282	Pyridoxal_deC	0.90
PF02604	PhdYeFM_antitox	0.90
PF10861	DUF2784	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	1.80
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.90
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.90
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.90
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.90
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.90
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.90
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.90
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.90
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.90
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.90
COG4300	Cadmium resistance protein CadD, predicted permease	Inorganic ion transport and metabolism [P]	0.90
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.90
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.90
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
All Organisms	root	All Organisms	41.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
cellular organisms	root	All Organisms → cellular organisms	41.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.60 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.60 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.80 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.60 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.70 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.80 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.80 %
Dietziaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.70 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.80 %
Virgisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium	1.80 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.90 %
Dietzia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	1.80 %
Virgisporangium aliadipatigenens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aliadipatigenens	1.80 %
Nocardioides islandensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides islandensis	0.90 %
Actinomadura geliboluensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura geliboluensis	0.90 %
Streptomyces jeddahensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces jeddahensis	0.90 %
Nocardioides immobilis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides immobilis	0.90 %
unclassified Dietzia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia	0.90 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.60 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	1.80 %
Virgisporangium aliadipatigenens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aliadipatigenens	1.80 %
Dietzia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia → Dietzia sp.	0.90 %
Nocardioides islandensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides islandensis	0.90 %
Actinomadura geliboluensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura geliboluensis	0.90 %
Streptomyces jeddahensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces jeddahensis	0.90 %
Nocardioides immobilis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides immobilis	0.90 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_104578598	Not Available	1204	Open in IMG/M
3300004092\|Ga0062389_102509673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	684	Open in IMG/M
3300004635\|Ga0062388_102711137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300005435\|Ga0070714_100364461	Not Available	1359	Open in IMG/M
3300005436\|Ga0070713_100177666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aliadipatigenens	1911	Open in IMG/M
3300005444\|Ga0070694_101064188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides islandensis	674	Open in IMG/M
3300005450\|Ga0066682_10743937	Not Available	597	Open in IMG/M
3300005467\|Ga0070706_100076672	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300005471\|Ga0070698_101345616	Not Available	664	Open in IMG/M
3300005577\|Ga0068857_100148160	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300005610\|Ga0070763_10207789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1046	Open in IMG/M
3300005614\|Ga0068856_100733086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia → Dietzia sp.	1008	Open in IMG/M
3300006028\|Ga0070717_10350206	Not Available	1320	Open in IMG/M
3300006041\|Ga0075023_100195330	Not Available	777	Open in IMG/M
3300006175\|Ga0070712_101066673	Not Available	700	Open in IMG/M
3300006237\|Ga0097621_100469883	Not Available	1135	Open in IMG/M
3300006358\|Ga0068871_100229078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1612	Open in IMG/M
3300006804\|Ga0079221_10747154	Not Available	691	Open in IMG/M
3300006806\|Ga0079220_12020819	Not Available	514	Open in IMG/M
3300007265\|Ga0099794_10023553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2818	Open in IMG/M
3300009093\|Ga0105240_11062498	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300009094\|Ga0111539_12660560	Not Available	580	Open in IMG/M
3300009101\|Ga0105247_11271423	Not Available	589	Open in IMG/M
3300009148\|Ga0105243_11803891	Not Available	643	Open in IMG/M
3300009174\|Ga0105241_10226366	Not Available	1575	Open in IMG/M
3300009553\|Ga0105249_10615617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura geliboluensis	1141	Open in IMG/M
3300010043\|Ga0126380_11361391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300010046\|Ga0126384_12484996	Not Available	503	Open in IMG/M
3300010371\|Ga0134125_10786176	Not Available	1047	Open in IMG/M
3300010371\|Ga0134125_11562364	Not Available	718	Open in IMG/M
3300010376\|Ga0126381_101878216	Not Available	864	Open in IMG/M
3300010396\|Ga0134126_10748104	Not Available	1108	Open in IMG/M
3300010397\|Ga0134124_12646670	Not Available	545	Open in IMG/M
3300010399\|Ga0134127_13190720	Not Available	536	Open in IMG/M
3300012209\|Ga0137379_10211287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1854	Open in IMG/M
3300012209\|Ga0137379_10361451	Not Available	1361	Open in IMG/M
3300012210\|Ga0137378_10108771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2552	Open in IMG/M
3300012210\|Ga0137378_10231564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1720	Open in IMG/M
3300012211\|Ga0137377_11147765	Not Available	707	Open in IMG/M
3300012350\|Ga0137372_10059714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3326	Open in IMG/M
3300012350\|Ga0137372_10665092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	757	Open in IMG/M
3300012350\|Ga0137372_10865081	Not Available	645	Open in IMG/M
3300012351\|Ga0137386_11026305	Not Available	586	Open in IMG/M
3300012359\|Ga0137385_11350878	Not Available	576	Open in IMG/M
3300012480\|Ga0157346_1020416	Not Available	574	Open in IMG/M
3300012984\|Ga0164309_11137260	Not Available	651	Open in IMG/M
3300012985\|Ga0164308_11804123	Not Available	570	Open in IMG/M
3300013104\|Ga0157370_11184038	Not Available	690	Open in IMG/M
3300013307\|Ga0157372_10212587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2241	Open in IMG/M
3300013308\|Ga0157375_10809426	Not Available	1085	Open in IMG/M
3300014745\|Ga0157377_10309771	Not Available	1045	Open in IMG/M
3300015242\|Ga0137412_10913802	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300015265\|Ga0182005_1196400	All Organisms → cellular organisms → Bacteria → Terrabacteria group	605	Open in IMG/M
3300016404\|Ga0182037_10219159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	1488	Open in IMG/M
3300017924\|Ga0187820_1118290	Not Available	775	Open in IMG/M
3300017928\|Ga0187806_1020897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1896	Open in IMG/M
3300017932\|Ga0187814_10112703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300017943\|Ga0187819_10224035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300017966\|Ga0187776_10488419	Not Available	840	Open in IMG/M
3300017972\|Ga0187781_10960878	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300017995\|Ga0187816_10340041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300018046\|Ga0187851_10474331	Not Available	711	Open in IMG/M
3300020002\|Ga0193730_1037919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1396	Open in IMG/M
3300020579\|Ga0210407_10324588	Not Available	1203	Open in IMG/M
3300020581\|Ga0210399_10505830	Not Available	1004	Open in IMG/M
3300020582\|Ga0210395_10154699	Not Available	1712	Open in IMG/M
3300021171\|Ga0210405_10709887	Not Available	776	Open in IMG/M
3300021178\|Ga0210408_10164002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1762	Open in IMG/M
3300021178\|Ga0210408_11079234	Not Available	618	Open in IMG/M
3300021404\|Ga0210389_10192219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1590	Open in IMG/M
3300021404\|Ga0210389_11468259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300021432\|Ga0210384_10579042	Not Available	1009	Open in IMG/M
3300021432\|Ga0210384_10730815	Not Available	885	Open in IMG/M
3300021474\|Ga0210390_11399780	Not Available	557	Open in IMG/M
3300021479\|Ga0210410_10961475	Not Available	742	Open in IMG/M
3300021559\|Ga0210409_10519233	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300022724\|Ga0242665_10234653	Not Available	618	Open in IMG/M
3300022726\|Ga0242654_10432881	Not Available	510	Open in IMG/M
3300024222\|Ga0247691_1068464	Not Available	536	Open in IMG/M
3300024288\|Ga0179589_10074816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1335	Open in IMG/M
3300025903\|Ga0207680_11207538	Not Available	539	Open in IMG/M
3300025906\|Ga0207699_10974880	Not Available	626	Open in IMG/M
3300025910\|Ga0207684_10429685	Not Available	1134	Open in IMG/M
3300025910\|Ga0207684_11714637	Not Available	506	Open in IMG/M
3300025916\|Ga0207663_10522924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides immobilis	924	Open in IMG/M
3300025922\|Ga0207646_10636781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces jeddahensis	956	Open in IMG/M
3300025925\|Ga0207650_10820894	Not Available	788	Open in IMG/M
3300025929\|Ga0207664_10729382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	891	Open in IMG/M
3300025936\|Ga0207670_10389193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300025941\|Ga0207711_10667576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	970	Open in IMG/M
3300026557\|Ga0179587_11185362	Not Available	503	Open in IMG/M
3300026984\|Ga0208732_1027831	Not Available	525	Open in IMG/M
3300027817\|Ga0209112_10141843	Not Available	801	Open in IMG/M
3300028828\|Ga0307312_10810175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300028875\|Ga0307289_10356069	All Organisms → cellular organisms → Bacteria → Terrabacteria group	602	Open in IMG/M
3300031057\|Ga0170834_109631679	Not Available	509	Open in IMG/M
3300031640\|Ga0318555_10197842	Not Available	1083	Open in IMG/M
3300031680\|Ga0318574_10361121	Not Available	847	Open in IMG/M
3300031715\|Ga0307476_11347131	Not Available	520	Open in IMG/M
3300031720\|Ga0307469_11915241	Not Available	574	Open in IMG/M
3300031751\|Ga0318494_10159918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	1272	Open in IMG/M
3300031778\|Ga0318498_10458526	Not Available	563	Open in IMG/M
3300031823\|Ga0307478_10783135	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300031823\|Ga0307478_11664708	Not Available	526	Open in IMG/M
3300031860\|Ga0318495_10305890	Not Available	707	Open in IMG/M
3300032039\|Ga0318559_10166365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300032044\|Ga0318558_10599784	Not Available	550	Open in IMG/M
3300032180\|Ga0307471_100507317	Not Available	1355	Open in IMG/M
3300032180\|Ga0307471_101227365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aliadipatigenens	913	Open in IMG/M
3300032805\|Ga0335078_11687468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300033134\|Ga0335073_10225534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2305	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.88%
Host-Associated	Host-Associated	17.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.77%
Plants	Host-Associated → Plants	17.12%
Aquatic	Environmental → Aquatic	8.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.61%
Freshwater	Environmental → Aquatic → Freshwater	7.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Roots	Host-Associated → Plants → Roots	1.80%
Sediment	Environmental → Aquatic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.86%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1045785981	3300000956	Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFMRRRRIRRWIRTGALLTVVGLMPLARAVRAR
Ga0062389_1025096731	3300004092	Bog Forest Soil	MRLRPHRRNLVVWSQSAGSAGLLDAPRPTRTRRIRRRARIAVLLTVVALWPLVRAVRARWRSLLAGAVLTAIGVMMRGSTTGSVLLL
Ga0062388_1027111372	3300004635	Bog Forest Soil	MRLRPHRRNLVVWSQSAGSAGLLDAPRPTRTRRIRRRARIAVLLTVVALWPLVRAVRARWRSLLAGAVLTAIGVMMRGSTTGSVLL
Ga0070714_1003644613	3300005435	Agricultural Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAG
Ga0070713_1001776661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGVPPPTRRRRIRRWIRTGALLTVVGLVPLARAVRARWRPLLAGGVLTV
Ga0070694_1010641881	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAG
Ga0066682_107439371	3300005450	Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVG
Ga0070706_1000766721	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVV
Ga0070698_1013456161	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRSHRRNLVWSQSAGSVGRYGAPPFTRRRRIRRWVRTGALLTVVGLMPLARAVRARWRPLLAGGVL
Ga0068857_1001481604	3300005577	Corn Rhizosphere	MRPRSHRRNLVVWSQSAGSAGRYAAPPFTRRRRIRRWIRTGALLTVV
Ga0070763_102077891	3300005610	Soil	MRLRSHRRNMVVWSQSASSVDRSGATPFTRTRRIRKWIRTGALLTIVGLMPLARAGRARW
Ga0068856_1007330863	3300005614	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRP
Ga0070717_103502061	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRSHRRNLVVWSQTAGSVGRYGAPPFRRRRRIRRWIRTGALLTVVRLMPLARAVRARW
Ga0075023_1001953301	3300006041	Watersheds	MTLRSHRRNLVVWSQSASSVDRSGATPFTRTRRIRKWIRTGALLT
Ga0070712_1010666731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARW
Ga0097621_1004698833	3300006237	Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGI
Ga0068871_1002290783	3300006358	Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRA
Ga0079221_107471542	3300006804	Agricultural Soil	MRLRAHRRNLVLWSQSASSIGRCVAPPFTRTRRIRRWIRTVALLIVVGLMPLARAVLARWRLLLAVGVV
Ga0079220_120208191	3300006806	Agricultural Soil	MRLRSHRRNLVVWSQSAGSAGSHGAPPFTRRRRIRRWIRTGALLTVVGLMPL
Ga0099794_100235531	3300007265	Vadose Zone Soil	MRLRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVV
Ga0105240_110624981	3300009093	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLA
Ga0111539_126605601	3300009094	Populus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRLIRTGALLTVVGLMPLARAVRA
Ga0105247_112714231	3300009101	Switchgrass Rhizosphere	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRGRRIRRWIRTGALLTVVGLMPLARAVRA
Ga0105243_118038912	3300009148	Miscanthus Rhizosphere	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRLIRTGALLTVVGLMPLA
Ga0105241_102263661	3300009174	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPPTRRRRIRRWIRTGALLTVVGLVPLARAVRARWRPLLAGGVLTV
Ga0105249_106156172	3300009553	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGWYGAPPFTRKRRIRRWIRTGALLTVVGLM
Ga0126380_113613911	3300010043	Tropical Forest Soil	MRLRAHRRNLVVWGPSVGSADRYGAPRLTRTRRIRRWIRTGALLMIIGLMG
Ga0126384_124849961	3300010046	Tropical Forest Soil	MRLGSHRRNRMVWSQSTRSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTVVGVV
Ga0134125_107861762	3300010371	Terrestrial Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARA
Ga0134125_115623641	3300010371	Terrestrial Soil	MKLRAHRRNLVLWSQSASSIGRDGALPFTRTRRIRRWIRVGALLTVVGLMPLARA
Ga0126381_1018782163	3300010376	Tropical Forest Soil	MRRRSHRRNLVVWSQSAGSAGRYGVPPFTRRRRIRRWIRTGALLTVVGLRPLARAVRAR
Ga0134126_107481042	3300010396	Terrestrial Soil	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRGRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLGGAVLTVVGVI
Ga0134124_126466701	3300010397	Terrestrial Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRLIRTGALLTVVG
Ga0134127_131907201	3300010399	Terrestrial Soil	MRQRSHRRNLVVWSQSAGSVGRYGARPLTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLT
Ga0137379_102112871	3300012209	Vadose Zone Soil	MRLRSHRRNLVVWSQTAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVRLMPLARAV
Ga0137379_103614512	3300012209	Vadose Zone Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVRLMPLARAV
Ga0137378_101087714	3300012210	Vadose Zone Soil	MRLRSHQRNLVVWSQSAGSIGRYGAAPFARRRQIRRWIGTSALLTVVGLMPLARAVRARWRPLLAGGVLTVVGV
Ga0137378_102315641	3300012210	Vadose Zone Soil	MRLRSHRRNLVVWSQTAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVRLMPLARAVR
Ga0137377_111477651	3300012211	Vadose Zone Soil	MRQRSRRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGL
Ga0137372_100597141	3300012350	Vadose Zone Soil	MRLRSHQRNLVVWSQSAGSIGRYGAAPFARRRRIRRWIRTSALLTVVGLMPLARAVRARWRPLLAGGVLTV
Ga0137372_106650922	3300012350	Vadose Zone Soil	MRLRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVRLRPLARAVRARWRPL
Ga0137372_108650813	3300012350	Vadose Zone Soil	MTAMRPRSHRRNLVVWSQTAGSAGRHGARPFTRRRRIRKWIRTGALLTVVRLRPLARAVRARWRPL
Ga0137386_110263051	3300012351	Vadose Zone Soil	MRPRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLRPLA
Ga0137385_113508781	3300012359	Vadose Zone Soil	MRLRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVRLRPLARAVRARWRPLLA
Ga0157346_10204161	3300012480	Arabidopsis Rhizosphere	MRRRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWFRTGALLTVVGLMPLARAVR
Ga0164309_111372602	3300012984	Soil	MRLRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLAR
Ga0164308_118041231	3300012985	Soil	MRQRSHRRNLVVWSQSAGSVGKYCSPSFTRRRRIRRWIRTGALLTVVGLRPLARAVRARWRPLLAGGVLTVAG
Ga0157370_111840381	3300013104	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGVPPPTRRRRIRRWIRTGALLTVVGLMPLARAVRARW
Ga0157372_102125875	3300013307	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGSPSFTRRRRIRRWIRTGALLTVVGLMPLA
Ga0157375_108094262	3300013308	Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRP
Ga0157377_103097712	3300014745	Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVR
Ga0137412_109138021	3300015242	Vadose Zone Soil	MRQRLHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTLVGLRPLARAV
Ga0182005_11964002	3300015265	Rhizosphere	MRLRSHRRNLVVRSQSAGSVGRYGAPPFTRRRRIRRRIRTGALLTVVGLM
Ga0182037_102191591	3300016404	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPWHAPCGPAGVPC
Ga0187820_11182901	3300017924	Freshwater Sediment	MRLRSHRRNLVVWSQAASSVGRSGAPPFTRIRRIHRWIRTGALLTIVGLMPLARAGRARWWLLLAVGVLTV
Ga0187806_10208971	3300017928	Freshwater Sediment	MRLRPQRRTLVVWRQSAGSAGRYGARRLTRGRRIRRWLRTGALLTVVALMHL
Ga0187814_101127031	3300017932	Freshwater Sediment	MRLRPQRRTLVVWRQSAGSAGRYGARRLTRGRRIRRWLRTGALLTVVALMHLAGAVRARW
Ga0187819_102240352	3300017943	Freshwater Sediment	MRLRPQRRTLVVWRQSVGSAGRYGARRLTRGRRIRRWLRTGALLTVVALMHLAGAVRARWRPLL
Ga0187776_104884191	3300017966	Tropical Peatland	MGLRPYRRNLVVWRQSAGSVGRYGAPRFTRLARTRRIRRWIRTGTLLSVVAALAL
Ga0187781_109608782	3300017972	Tropical Peatland	MRLRPHRRNLVVWDQSARSAGRYGAPPFTRTMRSRRWIRTAALLAVVGLMPLLHAVRARWRIPLAG
Ga0187816_103400411	3300017995	Freshwater Sediment	MRLRSHRRNLVVRSQSASSVGRYGTPPFTRTRRIHRWIRTGALLTVV
Ga0187851_104743312	3300018046	Peatland	MRLRRHRRNLVVWSQSAGPGGRYGAPPFTGPARTRRIRRFLRTGVLLTVLGLMPLAVAVQARWRRVLPGV
Ga0193730_10379191	3300020002	Soil	MRQRSHRRNLVVWSQSAGSVSRYGAPPFTRRRRIRRWIRTGALLTVVGLRPLARAVRARW
Ga0210407_103245882	3300020579	Soil	MRPRSHRRNLVVWSQTAGSAGRYAAPPFTRRRRIRRWIHTGALLTVVRLMPLARAVRARW
Ga0210399_105058301	3300020581	Soil	MTLRSHRRNLVVWNQSVASAGRYEAPRPTRTRRLRRRIRAV
Ga0210395_101546991	3300020582	Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFIRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVGV
Ga0210405_107098872	3300021171	Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFIRTRRIRKWIRTGALLTIVGLMPLARAG
Ga0210408_101640021	3300021178	Soil	MRRRSHRRNLVVRSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLT
Ga0210408_110792342	3300021178	Soil	MRLRSHRRNLVVWSQSAGSAGRYGVPPFTRRGRIRSWIRTGALLTVVGLMPLA
Ga0210389_101922192	3300021404	Soil	MWLRSHRRNLVVWSQFAGSADRMDARRFTRTRRIRRCIRTGALLAVVGLILLA
Ga0210389_114682591	3300021404	Soil	MRLPSHRRNLVVWSQSVGSAGRYGAPPFTRTRRIHRWIRTGVLLTVVGLTPVARAVRGRWWPLLAGGVLTVAGVLLRGGPG
Ga0210384_105790421	3300021432	Soil	MRLRSHRRNLVVWSQSAGSVGRYGVPPFTRRSRIRRWIRTGALLTVVGLMPL
Ga0210384_107308151	3300021432	Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFIRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPV
Ga0210390_113997802	3300021474	Soil	MWLRSHRRNLVVWSQFAGSADRMDARRFTRTRRIRRCIRTGALLAVVGL
Ga0210410_109614752	3300021479	Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFIRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVGVL
Ga0210409_105192332	3300021559	Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTV
Ga0242665_102346532	3300022724	Soil	MRPRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLAVVRLMPLARAVRARWRPLLA
Ga0242654_104328811	3300022726	Soil	MRLRSHRRNLVVWSQSAGSVGSHGAPPFTRRRRIRRWIRTGALLTVVGLMP
Ga0247691_10684641	3300024222	Soil	MRQRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGG
Ga0179589_100748163	3300024288	Vadose Zone Soil	MRLRAHRRNLVLWSQSASSIGRDGALPFTRTRRIRRWIRVGALLTVVSLMPLARAGRSRWRLLLAGGLLTVAGVMLRG
Ga0207680_112075381	3300025903	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGA
Ga0207699_109748801	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRLIRTGALLTVVGLMPLARAVRARWRPLLAGGV
Ga0207684_104296851	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVRLMPLARAVRARW
Ga0207684_117146371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRAHRRNLVLWSQSASSIGRYVAPPFTRTRRIRRWIRTGALLTVVGLMALARAGRARWRLLLAG
Ga0207663_105229241	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIW
Ga0207646_106367811	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRPRSHRRNLVVWSQSAGSAGRYAAPPFTRRRRIRRWIRTGALLTVVRLMPLA
Ga0207650_108208941	3300025925	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLT
Ga0207664_107293821	3300025929	Agricultural Soil	MRQRSHRRNLVVWSQSAGSVGKYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLD
Ga0207670_103891933	3300025936	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTM
Ga0207711_106675761	3300025941	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGI
Ga0179587_111853621	3300026557	Vadose Zone Soil	MRQRLHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVRLMPLVRAV
Ga0208732_10278312	3300026984	Forest Soil	MRLRSHRRNLVWSQSAGSVSRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRAR
Ga0209112_101418431	3300027817	Forest Soil	MRQRSHRRNLVVWSQSAGSVGKYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAV
Ga0307312_108101752	3300028828	Soil	MRRRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTV
Ga0307289_103560692	3300028875	Soil	MSLRSHRRNLVVWSQSAGSADRFGAPRFTRTRRIRRCIRTGALLAVVGLMPLARGGRAR
Ga0170834_1096316792	3300031057	Forest Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFTRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVGVLTVVAVMLHAFVGVVLLFL
Ga0318555_101978422	3300031640	Soil	MRLRPHRRNLVVWSQSAGSAGRYGAPRFTTLARTGRTRRWIRTGALLSVVGLVRLARAAR
Ga0318574_103611211	3300031680	Soil	MRLRPHRRNLVVWSQSAGSAGRYGAPRFTTLARTGRTRRWIRTGALLSV
Ga0307476_113471312	3300031715	Hardwood Forest Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFTRTRPIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVVVLTVVGVMLHAFVGVVL
Ga0307469_119152412	3300031720	Hardwood Forest Soil	MRQRSHRRNLVVWSQSAGSVGRYGVPPPTRRRRIRRWIRTGALLTVVGLVPLARAVRAR
Ga0318494_101599181	3300031751	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGAVL
Ga0318498_104585261	3300031778	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAV
Ga0307478_107831352	3300031823	Hardwood Forest Soil	MRPRSHRRNLVVWSQSASSVGRYGTPPLTRSRRIRRRIRTAALLTVVSLMPVARAG
Ga0307478_116647082	3300031823	Hardwood Forest Soil	MRQRLHRRNLVVWSQSAGSIGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRVR
Ga0318495_103058902	3300031860	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMP
Ga0318559_101663651	3300032039	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGAVLTVAGVM
Ga0318558_105997841	3300032044	Soil	MRLRPHRRNLVVWSQSAGSAGRYGAPRFTTLARTGRTRRWIRTGALLSVVGLVRLAR
Ga0307471_1005073171	3300032180	Hardwood Forest Soil	MRQRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVRLM
Ga0307471_1012273652	3300032180	Hardwood Forest Soil	MRQRSHRRNLVVWSQSAGSVGRYGVPPPTRRRRIRRWIRTGALLTVVGLVPLARAVRARWRPLLAG
Ga0335078_116874682	3300032805	Soil	MRLPSHRRNLVVWSQSAGSAGRYGAAPFTRTRRIHRWIRTGVLLIVVGLTPLARAVRARWRLLVAGGVLTVAGVVLR
Ga0335073_102255341	3300033134	Soil	MRQRSHRRNLVVWSQSAGSVGSRGARRFKRRRRIRRWIRTGALL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085979

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences