Metagenome / Metatranscriptome Family F085977

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085977
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	113 residues
Representative Sequence	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRP
Number of Associated Samples	94
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.27 %
% of genes near scaffold ends (potentially truncated)	36.94 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.369 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.009 % of family members)
Environment Ontology (ENVO)	Unclassified (42.342 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.568 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.79% β-sheet: 0.00% Coil/Unstructured: 52.21%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00487	FA_desaturase	29.73
PF00076	RRM_1	17.12
PF03466	LysR_substrate	3.60
PF01841	Transglut_core	3.60
PF13439	Glyco_transf_4	2.70
PF02896	PEP-utilizers_C	2.70
PF00072	Response_reg	1.80
PF09656	PGPGW	1.80
PF05013	FGase	1.80
PF00126	HTH_1	0.90
PF02899	Phage_int_SAM_1	0.90
PF01192	RNA_pol_Rpb6	0.90
PF00348	polyprenyl_synt	0.90
PF13692	Glyco_trans_1_4	0.90
PF02954	HTH_8	0.90
PF00486	Trans_reg_C	0.90
PF13483	Lactamase_B_3	0.90
PF00534	Glycos_transf_1	0.90
PF05524	PEP-utilisers_N	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	29.73
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	29.73
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	1.80
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	1.80
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.90
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	0.90
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.90
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.08 %
Unclassified	root	N/A	18.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.08 %
Unclassified	root	N/A	18.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.37 %
Unclassified	root	N/A	18.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	11.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.72 %
Unclassified	root	N/A	18.92 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	11.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	11.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.31 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.70 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	11.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.31 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	6.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.90 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Spiralia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Lophotrochozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Mollusca	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Cephalopoda	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Coleoidea	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Decapodiformes	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Spirulida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.92 %
Spirulina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	11.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.80 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Burkholderiales bacterium 8X	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003324\|soilH2_10415599	Not Available	1646	Open in IMG/M
3300004114\|Ga0062593_100847799	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300004156\|Ga0062589_100050872	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300004157\|Ga0062590_100872812	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300004480\|Ga0062592_101781631	Not Available	601	Open in IMG/M
3300004480\|Ga0062592_102495349	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300004643\|Ga0062591_101580676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	659	Open in IMG/M
3300004798\|Ga0058859_11573310	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005328\|Ga0070676_10077910	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300005329\|Ga0070683_100067590	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300005329\|Ga0070683_102111090	Not Available	541	Open in IMG/M
3300005330\|Ga0070690_100001027	All Organisms → cellular organisms → Bacteria	14276	Open in IMG/M
3300005334\|Ga0068869_100285585	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300005337\|Ga0070682_101771629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	538	Open in IMG/M
3300005337\|Ga0070682_102064589	Not Available	502	Open in IMG/M
3300005338\|Ga0068868_101722381	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005340\|Ga0070689_100810010	All Organisms → cellular organisms → Bacteria → Terrabacteria group	824	Open in IMG/M
3300005354\|Ga0070675_101019897	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005355\|Ga0070671_100441224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300005364\|Ga0070673_100075150	All Organisms → cellular organisms → Bacteria	2724	Open in IMG/M
3300005364\|Ga0070673_100817944	Not Available	861	Open in IMG/M
3300005364\|Ga0070673_101819680	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005365\|Ga0070688_100083272	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	2075	Open in IMG/M
3300005365\|Ga0070688_100461005	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	952	Open in IMG/M
3300005366\|Ga0070659_100481655	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300005367\|Ga0070667_100837305	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300005458\|Ga0070681_10259073	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005535\|Ga0070684_100196085	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	1839	Open in IMG/M
3300005543\|Ga0070672_100233523	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300005544\|Ga0070686_100019969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3959	Open in IMG/M
3300005544\|Ga0070686_100026385	All Organisms → cellular organisms → Bacteria	3507	Open in IMG/M
3300005564\|Ga0070664_100742467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	916	Open in IMG/M
3300005578\|Ga0068854_101816920	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005618\|Ga0068864_102014028	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005718\|Ga0068866_10268107	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005836\|Ga0074470_10908487	Not Available	894	Open in IMG/M
3300005836\|Ga0074470_11111497	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300005842\|Ga0068858_100115750	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300005842\|Ga0068858_100583949	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005843\|Ga0068860_100079567	All Organisms → cellular organisms → Bacteria → Proteobacteria	3116	Open in IMG/M
3300006028\|Ga0070717_11854152	Not Available	544	Open in IMG/M
3300006175\|Ga0070712_101287471	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	637	Open in IMG/M
3300006358\|Ga0068871_101977647	Not Available	555	Open in IMG/M
3300006844\|Ga0075428_100841641	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	974	Open in IMG/M
3300006854\|Ga0075425_101521789	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	755	Open in IMG/M
3300006881\|Ga0068865_101183553	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	676	Open in IMG/M
3300009177\|Ga0105248_11493465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	765	Open in IMG/M
3300009551\|Ga0105238_13009037	Not Available	506	Open in IMG/M
3300009553\|Ga0105249_11685723	Not Available	706	Open in IMG/M
3300010397\|Ga0134124_10205276	Not Available	1791	Open in IMG/M
3300010401\|Ga0134121_10017088	All Organisms → cellular organisms → Bacteria → Proteobacteria	5780	Open in IMG/M
3300010403\|Ga0134123_11881060	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012892\|Ga0157294_10192318	Not Available	595	Open in IMG/M
3300012900\|Ga0157292_10085267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	916	Open in IMG/M
3300012916\|Ga0157310_10187566	Not Available	742	Open in IMG/M
3300012985\|Ga0164308_10536745	Not Available	985	Open in IMG/M
3300013296\|Ga0157374_10656478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1061	Open in IMG/M
3300013306\|Ga0163162_10221950	All Organisms → cellular organisms → Bacteria → Proteobacteria	2020	Open in IMG/M
3300013308\|Ga0157375_10145358	All Organisms → cellular organisms → Bacteria	2502	Open in IMG/M
3300013308\|Ga0157375_10977700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	987	Open in IMG/M
3300014318\|Ga0075351_1027354	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300014325\|Ga0163163_10248768	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300014325\|Ga0163163_12222848	Not Available	608	Open in IMG/M
3300015371\|Ga0132258_10050096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9547	Open in IMG/M
3300015371\|Ga0132258_10332418	All Organisms → cellular organisms → Bacteria	3751	Open in IMG/M
3300015371\|Ga0132258_10395936	All Organisms → cellular organisms → Bacteria → Proteobacteria	3430	Open in IMG/M
3300015371\|Ga0132258_11060337	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300015372\|Ga0132256_100355210	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300015373\|Ga0132257_100760764	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300018081\|Ga0184625_10083814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1633	Open in IMG/M
3300018476\|Ga0190274_11247449	Not Available	828	Open in IMG/M
3300020000\|Ga0193692_1012219	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300020005\|Ga0193697_1019511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1677	Open in IMG/M
3300022756\|Ga0222622_10028098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2962	Open in IMG/M
3300022756\|Ga0222622_10119910	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300022915\|Ga0247790_10178136	Not Available	557	Open in IMG/M
3300024187\|Ga0247672_1000216	All Organisms → cellular organisms → Bacteria	10409	Open in IMG/M
3300024219\|Ga0247665_1004210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1502	Open in IMG/M
3300025315\|Ga0207697_10129727	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300025885\|Ga0207653_10407997	Not Available	533	Open in IMG/M
3300025903\|Ga0207680_10477603	All Organisms → cellular organisms → Bacteria → Terrabacteria group	886	Open in IMG/M
3300025912\|Ga0207707_10056215	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300025918\|Ga0207662_10004019	All Organisms → cellular organisms → Bacteria → Proteobacteria	7673	Open in IMG/M
3300025926\|Ga0207659_10914511	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300025930\|Ga0207701_11155004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	640	Open in IMG/M
3300025932\|Ga0207690_10216321	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300025936\|Ga0207670_10003483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8350	Open in IMG/M
3300025936\|Ga0207670_10706790	All Organisms → cellular organisms → Bacteria → Terrabacteria group	835	Open in IMG/M
3300025938\|Ga0207704_11946652	Not Available	506	Open in IMG/M
3300025940\|Ga0207691_10059679	All Organisms → cellular organisms → Bacteria	3468	Open in IMG/M
3300025941\|Ga0207711_11056171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	752	Open in IMG/M
3300025944\|Ga0207661_10090879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2543	Open in IMG/M
3300025960\|Ga0207651_11137242	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	700	Open in IMG/M
3300025986\|Ga0207658_10177923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X	1758	Open in IMG/M
3300025986\|Ga0207658_10637960	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300026023\|Ga0207677_10166331	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300026035\|Ga0207703_11522695	Not Available	644	Open in IMG/M
3300026118\|Ga0207675_101839213	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	624	Open in IMG/M
3300027717\|Ga0209998_10016126	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300028381\|Ga0268264_11911090	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	603	Open in IMG/M
3300028768\|Ga0307280_10007020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2962	Open in IMG/M
3300031366\|Ga0307506_10293307	Not Available	634	Open in IMG/M
3300031547\|Ga0310887_10665754	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	643	Open in IMG/M
3300031562\|Ga0310886_10090801	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	1498	Open in IMG/M
3300031716\|Ga0310813_10416661	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Cephalopoda → Coleoidea → Decapodiformes → Spirulida → Spirulina	1159	Open in IMG/M
3300031858\|Ga0310892_10030649	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300031908\|Ga0310900_10348532	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300031940\|Ga0310901_10266170	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300032013\|Ga0310906_10068867	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300034666\|Ga0314788_068580	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300034667\|Ga0314792_080980	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.25%
Host-Associated	Host-Associated	47.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.75%
Plants	Host-Associated → Plants	46.85%
Aquatic	Environmental → Aquatic	4.50%
Human	Host-Associated → Human	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.82%
Sediment	Environmental → Aquatic → Sediment	4.50%
Roots	Host-Associated → Plants → Roots	2.70%
Digestive System	Host-Associated → Human → Digestive System	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.83%
Loam	Environmental → Terrestrial → Soil → Loam	18.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.90%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.21%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.01%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	8.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.21%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.70%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH2_104155992	3300003324	Sugarcane Root And Bulk Soil	MDLRTNIPASLSAFRTWLAVHPVVGDSPFSGSSVRYQVARYCDYLGANPWPFADPLRDEAARDGAVSAYADYLDTFNVPGVTITAVLVSLDRFYEFLGLGPVRPRAVSRPGLYAARRM*
Ga0062593_1008477992	3300004114	Soil	LAQPRTSIPDTLSAFSRWLSGHPVVGDSIFSGSSVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVNAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAISRPDPVTTRRT*
Ga0062589_1000508722	3300004156	Soil	MLRTNIPASLSAFTSWLAVNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPSADPLGDVVARDGAVSAYRDYLDTFNVSSTTIDAVLISLDRFYVFLGLGPVRLEAVSRPDPRAPRRM*
Ga0062590_1008728121	3300004157	Soil	MLRTNIPASLSAFTSWLAVNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPSADPLGDHVARDGAVRAYRDYLDTFNVPSTTIDAVLVSLDRFYVFLGLGPARVEAVSRPDPLAARRT*
Ga0062592_1017816312	3300004480	Soil	LSAFATWLVAHPVVGDQTYSGQSVRYQVARYCEYLHSNPWPFADPLGDEAARDGAVSAYRRYLDTFDAPAATIGGVLLSLDRFYVFLGLGPVRLPERGSDA*
Ga0062592_1024953491	3300004480	Soil	LAQPRTSIPDTLSAFSRWLSGHPVVGDSIFSGSSVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVNAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRC
Ga0062591_1015806761	3300004643	Soil	MGLRANIPASLSAFTTWLVVHPVLGDSTFSRSSVRYQVARYCEYLGTNPWPFADPLRDQAARDGAVSAYADYLDTFNVPGATITAVLVSLDLFYAFLGLGPVRLRAVS
Ga0058859_115733101	3300004798	Host-Associated	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPEPVTTRRM*
Ga0070676_100779102	3300005328	Miscanthus Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT*
Ga0070683_1000675906	3300005329	Corn Rhizosphere	VNLRTNIPASLTAFTSWLAVHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPFADPLRDEAARDGAVRAYADYLDTFNVSAATIAAVLISLDRFYAFLGLGPVRLLAVSRAVLQAAPRT*
Ga0070683_1021110902	3300005329	Corn Rhizosphere	MRPRTSIPVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNAPGATIAAVLVSLDRFYVFLGLGPARLGA
Ga0070690_10000102711	3300005330	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR*
Ga0068869_1002855854	3300005334	Miscanthus Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM*
Ga0070682_1017716291	3300005337	Corn Rhizosphere	MRPRTSIPVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNAPGATIAAVLVSLDRFYVFLGLGPARLGALSPPGLHAARRT*
Ga0070682_1020645891	3300005337	Corn Rhizosphere	MGLRISIPASLSAFANWLLANPVVGDATYSGQSVRYQVARYCEYLHNNPWPSADPLGDKAARDGAVSAYREYLGTYAPAEAIGAVLLSLDRFYVFLGLGPVRLDP*
Ga0068868_1017223812	3300005338	Miscanthus Rhizosphere	RINIPASLSAFTSWLAVHPVEGDATFSGSGVRYQVARYCDYLDTNPWPSADPLQDEAARDGAVSAYADYLDIFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR*
Ga0070689_1008100102	3300005340	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVAQYCEYLGTNPWPSADPLRDEAARDGAVGAYADYLDIFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR*
Ga0070675_1010198971	3300005354	Miscanthus Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAISRPDPVTTRRT*
Ga0070671_1004412242	3300005355	Switchgrass Rhizosphere	VVLRINIPASLSAFTSWLAVHPVEGDATFSGSGVRYQVARYCDYLDTNPWPSADPLQDEAARDGAVSAYADYLDIFNVSGATIAAALVSIDRFYAFLGLGPVRGRAVSRAGLHAARRT*
Ga0070673_1000751504	3300005364	Switchgrass Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT*
Ga0070673_1008179442	3300005364	Switchgrass Rhizosphere	MRPIAIDLRTSIPASLTAFSTWLAANPVVGDPTFSRSGVRYQVARYCEYLATNPWPLADPLGNVSARDGAVSAYRDYLETFNAADATIDAVLASIDRFYVFLGLGPVRLRAVR*
Ga0070673_1018196802	3300005364	Switchgrass Rhizosphere	PVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNTPGATIAAVLVSLDRFYVFLGLGPARLGALSPPGLHAARRT*
Ga0070688_1000832723	3300005365	Switchgrass Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT*
Ga0070688_1004610052	3300005365	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVAQYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR*
Ga0070659_1004816553	3300005366	Corn Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRP
Ga0070667_1008373053	3300005367	Switchgrass Rhizosphere	VVLRINIPASLSAFTSWLAVHPVEGDATFSGSGVRYQVARYCDYLDTNPWPSADPLQDEAARDGAVSAYADYLDIFNVSGATIAAALVSIDRFYAFLGLGP
Ga0070681_102590732	3300005458	Corn Rhizosphere	VNLRTNIPGSLTAFTSWLAVHPVVDDSTFSRLSVRYQVARYCEYLGTNPWPFADPLRDEAARDGAVRAYADYLDTFNVPGATIAAVLISLDRFYAFLGLGPVRLLAVSRPVLHAAPRT*
Ga0070684_1001960852	3300005535	Corn Rhizosphere	VNLRTNIPASLTAFTSWLAVHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPFADPLRDEAARDGAVRAYADYLDTFNVSAATIAAVLISLDRFYAFLGLGPVRLLAVSRAVLEAAPRT*
Ga0070672_1002335232	3300005543	Miscanthus Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM*
Ga0070686_1000199693	3300005544	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLG
Ga0070686_1000263856	3300005544	Switchgrass Rhizosphere	HPVVGDSTFSRLSVRYQVAQYCEYLGTNPWPSADPLRDEAARDGAVGAYADYLDIFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR*
Ga0070664_1007424672	3300005564	Corn Rhizosphere	LAQPRTSIPDTLSAFSRWLSGHPVVGDSIFSGSSVRYQVARYCDYLGTNPWPSADPLGDVVARDGAVSAYRDYLDTFNVSSTTIDAVLISLDRFYVFLGLGPVRLEAVSRPDPRAPRRM*
Ga0068854_1018169202	3300005578	Corn Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGP
Ga0068864_1020140281	3300005618	Switchgrass Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVNAYRHYLDTFNVPSATIDAVLVSLDRFYVFLG
Ga0068866_102681072	3300005718	Miscanthus Rhizosphere	PDTLSAFSRWLAGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT*
Ga0074470_109084872	3300005836	Sediment (Intertidal)	MTAPRRDATGLRISIPASLSAFASWLADHPVMGDPAYSGQGVRYQVARYCEYLHSNPWPGADPLADQAARDGAVRAYRQYLDMFDTPAGAIRGILLSLDRFYVFLGLGV
Ga0074470_111114974	3300005836	Sediment (Intertidal)	MSLRISIPASLSAFANWLLAHPVVGDATYSGQSVRYQVARYCEYLHNNPWPLADPLGDRAARDGAVSAYREYLGTYAPAEAVGGILLSLDRFYVFLGLGPVRLDP*
Ga0068858_1001157503	3300005842	Switchgrass Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT*
Ga0068858_1005839492	3300005842	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVAQYCEYLGTNPWPSADPLRDEAARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR*
Ga0068860_1000795672	3300005843	Switchgrass Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT*
Ga0070717_118541521	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGLRINIPASLSAFSSWLALHPVAGDATFSGSSVRYQVARYCDYLVTNPWPLADPLRDQTARDGAVRAYRDYLDIFNVQGAAIDAIVVSLDRFYVFLGLGATGPGSRA*
Ga0070712_1012874712	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RGHRGRPNRAERAVNLRTNIPASLTAFTSWLAVHPVVGDSTFSRLSVRYQVACYCDYLGTNPWPFADPLRDEAARDGAVSAYADYLDTFNVPGATIAAVLVSLDRFYGFLGLGPVRPRAVSRPDLHAARRT*
Ga0068871_1019776472	3300006358	Miscanthus Rhizosphere	AVVLRINIPASLSAFTSWLAVHPVEGDATFSGSGVRYQVARYCDYLDTNPWPSADPLQDEAARDGAVSAYADYLDIFNVSGATIAAALVSIDRFYAFLGLGPVRGRAVSRAGLHAARRT*
Ga0075428_1008416411	3300006844	Populus Rhizosphere	DGCPSPRSIQMGLRISIPASLSAFTRWLAVNPVVGDSTFSGSGVRYQVGRYCDYLGANPWPFADPLGNVAARDGAVSAYRDYLDTFSVPGASIAAVLVSLDRFYVFLGLGPVRPPAVSRPGLHPAPTT*
Ga0075425_1015217892	3300006854	Populus Rhizosphere	MGLRTSIPTSLYAFTSWLAAHPVAGDSTFSGSGVRYQVARYCEYLGTNPWPFADPLADVAARDGAVSAYRDYLDTFNVPGATIAAVLVSLDRFYVFLGLGPVRRRAVS*
Ga0068865_1011835532	3300006881	Miscanthus Rhizosphere	RPIAIDLRTSIPASLTAFSTWLAANPVVGDPTFSRSGVRYQVARYCEYLATNPWPLADPLGNVSARDGAVSAYRDYLETFNAADATIDAVLASIDRFYVFLGLGPVRLRAVR*
Ga0105248_114934651	3300009177	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVAQYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLGPVRL
Ga0105238_130090371	3300009551	Corn Rhizosphere	LTAFTSWLAVHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPFADPLRDEAARDGAVRAYADYLDTFNVPGATIAAVLISLDRFYAFLGLGPVRLLAVSRAVLEAAPRT*
Ga0105249_116857232	3300009553	Switchgrass Rhizosphere	MRPRTSIPVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNAPGATIAAVLVSLDRFYVFLGLGPARLGAVSPPGLQAARLT*
Ga0134124_102052761	3300010397	Terrestrial Soil	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLGPVRLLAVSRAVLQAAPRT*
Ga0134121_100170887	3300010401	Terrestrial Soil	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLGPVRLLAVSRPGLHADRRR*
Ga0134123_118810601	3300010403	Terrestrial Soil	MDLRTSIPASLSAFTKWLAINPVAGDSNFSGSGVRYQVARYCDYLGANPWPFADPLGNPAARDGAVSAYRDYLDTFNVPGATIAAVLVSLDRFYVFLGLGPVRLPAVS*
Ga0157294_101923182	3300012892	Soil	VALRLSVQSSLSAFANWLVDNPVEGDRPYSGHSVRYQVARYCDYLDTNPWAGADPLGDEAARDGAVSAYRQYLDTFDAPAATIGGVLLSLDRFYVFLGLGPVRLPERGSDA*
Ga0157292_100852672	3300012900	Soil	SIPASLSAFATWLVAHPVVGDQTYSGQSVRYQVARYCEYLHSNPWPFADPLGDEAARDGAVSAYRRYLDTFDAPAATIGGVLLSLDRFYVFLGLGPVRLPERGSDA*
Ga0157310_101875661	3300012916	Soil	MALRTSIPASLSAFATWLVAHPVVGDQTYSGQSVRYQVARYCEYLHSNPWPFADPLGDEAARDGAVSAYRRYLDTFDAPAATIGGVLLSLDRFYVFLGLGPVRLPERGSDA*
Ga0164308_105367452	3300012985	Soil	VSLRISIPASLSAFANWLLANPVVGDATYSGQSVRYQVARYCEFLHSNPWPFADPLGDKAARDGAVSAYPQYLGTYAPAEAVGGILLSLDRFYVFLGLGPVTLDP*
Ga0157374_106564781	3300013296	Miscanthus Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVAQYCEYLGTNPWPSADPLRDEAARDGAVGAYADYLDIFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRR
Ga0163162_102219501	3300013306	Switchgrass Rhizosphere	SWLAVNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPEPVTTRRM*
Ga0157375_101453581	3300013308	Miscanthus Rhizosphere	SRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT*
Ga0157375_109777002	3300013308	Miscanthus Rhizosphere	MRPRTSIPVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNTPGATIAAVLVSLDRFYVFLGLGPVRFEAVSRPEPVTTRRM*
Ga0075351_10273542	3300014318	Natural And Restored Wetlands	MIGERGVGGPDAMSLRTSIPASLSAFASWLVDHPVVGDPTYSGQSVRYQVARYCEYLHSNPWPGADPLSDEVARDGAVSAYRHYLDTFDAAPAAAIGGILLNIDRFYGFLGLGPARLDQGAKR*
Ga0163163_102487683	3300014325	Switchgrass Rhizosphere	VVLRINIPASLSAFTSWLAVHPVEGDAPFSGSGVRYQVARYCDYLDTNPWPSADPLQDEAARDGAVSAYADYLDIFNVSGATIAAALVSIDRFYAFLGLGPVRGRAVSRAGLHAARRT*
Ga0163163_122228481	3300014325	Switchgrass Rhizosphere	MRPRTSIPVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNAPGATIAAVLVSLDRFYVFLGLGPARLGALSPSGLHAVRRT*
Ga0132258_100500964	3300015371	Arabidopsis Rhizosphere	MTNDARRTKGLRSNIPASLSEFSSWLALNPVAGDSVFSASSVRYQVARYCEYLVVNPWPLADPLRDQAARDGAVGAYRGYLDTFNVPGATIDAILVSIDRFYVFLGLGPVRAGARPIEVRQR*
Ga0132258_103324182	3300015371	Arabidopsis Rhizosphere	MDLRTSIPASLSAFTSWLAVHPVAGDSIFSGSSVRYQVARYCDYLGANPWPLADPLGDEVARDGAVSAYREYLGTFNVPRTTIDAVLVNLDRFYVFLGLGPARIEAVSRP*
Ga0132258_103959361	3300015371	Arabidopsis Rhizosphere	MSLRTSIPVSLSAFTRWLAANPVVGDAPFSQSSVRYQVARYCEYLGATPWPFADPLRDQAARDGAVSAYRRYLDTFNVPDATIAAVLVSLDRFYVFLGLGPVRGAVSPPGLHAARRT*
Ga0132258_110603372	3300015371	Arabidopsis Rhizosphere	MSLRTSIPASLSAFASWLVAHPVVGDQIYSGQSVRYHVARYCEYLHSNPWPGADPLGDRAARDGAVSAYRHYLDTFDASAAAIGGILLSLDRFYVFLGLGPVKPGA*
Ga0132256_1003552104	3300015372	Arabidopsis Rhizosphere	LAQARTSIPDKLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDFLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM*
Ga0132257_1007607642	3300015373	Arabidopsis Rhizosphere	LAQARTNIPDKLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLAEPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM*
Ga0184625_100838143	3300018081	Groundwater Sediment	MALRISIPASLSAFATWLADHPVVGDQTFSGNSVRYQVARYCDYLHCNPWPGADPLGDRAARDGAVSAYRQYLDTFNAAPATIGGILVSLDRFYVFLGLGPARLEAEQSARQLGV
Ga0190274_112474491	3300018476	Soil	MSLRTSIPASLSAFASWLVAHPVVGDQTYSGQSVRYQVARYCEYLHSNPWPFADPLGDEAARDGAVSAYRRYLDTFDAPAATIGGILLSLDRFYVFLGLGPVRLAERGLDA
Ga0193692_10122192	3300020000	Soil	MGLRISIPASLSAFGSWLLEHPVLGDPTYSGQSIRYHVARYCEYLHSNPWPGADPLADKTARDGAVSAYRQYLAMFDAAAAASGGILLSLDRFYIFLGLGPIRPDA
Ga0193697_10195113	3300020005	Soil	MALRISIPASLSAFATWLADHPVVGDQTFSGHSVRYQVARYCDYLHSNPWPGADPLGDKTARDGAVSAYRHYLDTFNAAPATIGGILVSLDRFYVFLGLGPARLEPETRAAM
Ga0222622_100280982	3300022756	Groundwater Sediment	MGLRISIPASLSAFGSWLLKHPVVDDPTYSGQSVRYQVARYCEYLDSNPWPGADPLADKAARDGAVSAYRQYLDMFNAPVASGRGAVLLSLDRFYVFLGLGPIRPDA
Ga0222622_101199102	3300022756	Groundwater Sediment	MSLRTSIPASLSAFASWLVEHPVVGDQTYSGQSVRYQVARYCEYLHSNPWPFADPLGDEAARDGAVRAYRHYLDTFDAPAATIGKVLLSLDRFYVFLGLGPVRLPARASDA
Ga0247790_101781361	3300022915	Soil	MALRTSIPASLSAFATWLVAHPVVGDQTYSGQSVRYQVARYCEYLHSNPWPFADPLGDEAARDGAVSAYRRYLDTFDAPAATIGGVLLSLDRFYVFLGLGPVRLPERGSDA
Ga0247672_10002166	3300024187	Soil	MGLRISIPASLSAFASWLVAHPVVGDPTYSGQSVRYQVARYCEYLDSNPRPGADPLGDKAARDGAVSAYRQYLETFGAPAAAIGGILLNLDRFYVFLGLGPATLEPR
Ga0247665_10042101	3300024219	Soil	MGLRISIPASLSAFASWLVAHPVVGDPTYSGQSVRYQVARYCEYLDSNPRPGADPLGDKAARDGAVSAYRQYLETFGAPAAAIGGILLNLDRFYVFLGLGPA
Ga0207697_101297271	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT
Ga0207653_104079972	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT
Ga0207680_104776032	3300025903	Switchgrass Rhizosphere	VVLRINIPASLSAFTSWLAVHPVEGDATFSGSGVRYQLARSCDYLDTNPWPSADPLQDEAARDGAVSAYADYLDIFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR
Ga0207707_100562152	3300025912	Corn Rhizosphere	VNLRTNIPGSLTAFTSWLAVHPVVDDSTFSRLSVRYQVARYCEYLGTNPWPFADPLRDEAARDGAVRAYADYLDTFNVPGATIAAVLISLDRFYAFLGLGPVRLLAVSRPVLHAAPRT
Ga0207662_100040197	3300025918	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR
Ga0207659_109145111	3300025926	Miscanthus Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFE
Ga0207701_111550042	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRPRTSIPVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNAPGATIAAVLVSLDRFYVFLGLGPARL
Ga0207690_102163212	3300025932	Corn Rhizosphere	LAQARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTTRRM
Ga0207670_100034837	3300025936	Switchgrass Rhizosphere	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM
Ga0207670_107067901	3300025936	Switchgrass Rhizosphere	LQRFEKTDECERCRAYRSRVRKGHHVRSDRAERAVNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVAQYCEYLGTNPWPSADPLRDEAARDGAVGAYADYLDIFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR
Ga0207704_119466521	3300025938	Miscanthus Rhizosphere	IRRMRPIAIDLRTSIPASLTAFSTWLAANPVVGDPTFSRSGVRYQVARYCEYLATNPWPLADPLGNVSARDGAVSAYRDYLETFNAADATIDAVLASIDRFYVFLGLGPVRLRAVR
Ga0207691_100596792	3300025940	Miscanthus Rhizosphere	MRPRTSIPVSLSAFSRWLTANPVVGDAPFSQSSVRYQVARYCDYLGANPWPFADPLGDEAARDGAVSAYRDYLDTFNAPGATIAAVLVSLDRFYVFLGLGPARLGALSPPGLHAARRT
Ga0207711_110561712	3300025941	Switchgrass Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPSADPLRDEVARDGAVGAYADYLDTFNVSGATIGAVLVSLDRFYAFLGLGPVRLR
Ga0207661_100908791	3300025944	Corn Rhizosphere	VNLRTNIPASLTAFTSWLAVHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPFADPLRDEAARDGAVRAYADYLDTFNVSAATIAAVLISLDRFYAFLGLGPVRLLAVSRAVLQAAPRT
Ga0207651_111372422	3300025960	Switchgrass Rhizosphere	MRPIAIDLRTSIPASLTAFSTWLAANPVVGDPTFSRSGVRYQVARYCEYLATNPWPLADPLGNVSARDGAVSAYRDYLETFNAADATIDAVLASIDRFYVFLGLGPVRLRAVR
Ga0207658_101779232	3300025986	Switchgrass Rhizosphere	VVLRINIPASLSAFTSWLAVHPVEGDATFSGSGVRYQVARYCDYLDTNPWPSADPLQDEAARDGAVSAYADYLDIFNVSGATIAAALVSIDRFYAFLGLGPVRGRAVSRAGLHAARRT
Ga0207658_106379602	3300025986	Switchgrass Rhizosphere	TSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPRRRRHRRT
Ga0207677_101663312	3300026023	Miscanthus Rhizosphere	VNLRTNIPASLTAFTSWLADHPVVGDSTFSRLSVRYQVARYCEYLGTNPWPSADPLRDEAARDGAVGAYADYLDIFNVPGATIATVLVSLDRFYAFLGLGPVRLRAVSRPGLHADRRR
Ga0207703_115226952	3300026035	Switchgrass Rhizosphere	MGLRISIPASLSAFANWLLANPVVGDATYSGQSVRYQVARYCEYLHNNPWPSADPLGDKAARDGAVSAYREYLGTYAPAEAIGAVLLSLDRFYVFLGLGPVRLDP
Ga0207675_1018392132	3300026118	Switchgrass Rhizosphere	QARTSIPDKLSAFSRWLSGNPVAGDSIFSGSGVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM
Ga0209998_100161262	3300027717	Arabidopsis Thaliana Rhizosphere	LAQPRTSIPDTLSAFSRWLSGHPVVGDSIFSGSSVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVNAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAISRPDPVTTRRT
Ga0268264_119110902	3300028381	Switchgrass Rhizosphere	QMRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPFADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRCEAVSRPDPVTIRRT
Ga0307280_100070202	3300028768	Soil	MGLRLSIPASLSAFGSWLLDHPVMGDPTYTGQSVRYHVARYCEYLHSNPWPGADPLADKTARDGAVSAYRQYLAMFDAAAAASGGILLSLDRFYIFLGLGPIRPDA
Ga0307506_102933072	3300031366	Soil	MGLRISIPASLSAFGSWLLQHPVMGDPTYSGQSVRYHVARYCEYLHSNPWPGADPLRDKTARDGAVNAYRQYLAMFDAAAAASGGILLSLDRFYIFLGLGPIRPDA
Ga0310887_106657541	3300031547	Soil	IPDKLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM
Ga0310886_100908012	3300031562	Soil	DKLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM
Ga0310813_104166612	3300031716	Soil	VSLRTNIPASLTAFTGWLAVHPMVGDSPFSRLSVRYQVARYCEYLGTNPWPFADPLRDEAARDGAVRAYADYLGTFDVPGATIAAVLVSLDRFYAFLGLGPVRLRAVSRPGLPVDRRR
Ga0310892_100306494	3300031858	Soil	LAQARTNIPDKLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTRRM
Ga0310900_103485321	3300031908	Soil	LAQARTNIPDKLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFE
Ga0310901_102661701	3300031940	Soil	LAQARTSIPDKLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVT
Ga0310906_100688674	3300032013	Soil	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPEPVTTRRM
Ga0314788_068580_2_325	3300034666	Soil	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRP
Ga0314792_080980_434_775	3300034667	Soil	MRTSIPDTLSAFSRWLAGNPVAGDSIFSGSSVRYQVARYCDYLGTNPWPLADPLGDEVARDGAVSAYRHYLDTFNVPSATIDAVLVSLDRFYVFLGLGPVRFEAVSRPDPVTTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085977

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences