Metagenome / Metatranscriptome Family F085960

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085960
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	122 residues
Representative Sequence	MELVLGARSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEDDLVKAVRSETRRHDYDEVILATGRQGGSSLARGLHLDPVHQLRRRLGQRLIVFPHGPDAPDPTPPA
Number of Associated Samples	99
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.60 %
% of genes near scaffold ends (potentially truncated)	84.68 %
% of genes from short scaffolds (< 2000 bps)	92.79 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.874 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.928 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.252 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.56% β-sheet: 6.85% Coil/Unstructured: 59.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00701	DHDPS	11.71
PF01494	FAD_binding_3	1.80
PF02738	MoCoBD_1	0.90
PF13796	Sensor	0.90
PF13450	NAD_binding_8	0.90
PF00890	FAD_binding_2	0.90
PF13412	HTH_24	0.90
PF00583	Acetyltransf_1	0.90
PF04672	Methyltransf_19	0.90
PF02909	TetR_C_1	0.90
PF00171	Aldedh	0.90
PF00149	Metallophos	0.90
PF02467	Whib	0.90
PF00196	GerE	0.90
PF12697	Abhydrolase_6	0.90
PF05988	DUF899	0.90
PF13623	SurA_N_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	23.42
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.60
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.80
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.80
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.80
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.90
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.90
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.90
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.90
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.87 %
Unclassified	root	N/A	26.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.87 %
Unclassified	root	N/A	26.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.87 %
Unclassified	root	N/A	26.13 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.07 %
Unclassified	root	N/A	26.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.07 %
Unclassified	root	N/A	26.13 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	70.27 %
Unclassified	root	N/A	26.13 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	63.06 %
Unclassified	root	N/A	26.13 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.80 %
Verrucomicrobia bacterium ADurb.Bin345	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin345	0.90 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.06 %
Unclassified	root	N/A	26.13 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.90 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Verrucomicrobia bacterium ADurb.Bin345	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin345	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.06 %
Unclassified	root	N/A	26.13 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.90 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.90 %
Verrucomicrobia bacterium ADurb.Bin345	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin345	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.06 %
Unclassified	root	N/A	26.13 %
Nonomuraea phyllanthi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea phyllanthi	0.90 %
Nocardia arthritidis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia arthritidis	0.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.90 %
Verrucomicrobia bacterium ADurb.Bin345	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin345	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZTSFBX01COT14	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300003369\|JGI24140J50213_10184883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300005163\|Ga0066823_10044734	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005179\|Ga0066684_10311309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1048	Open in IMG/M
3300005332\|Ga0066388_107381127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005337\|Ga0070682_101836404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300005435\|Ga0070714_100868256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300005436\|Ga0070713_101498565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300005436\|Ga0070713_101977835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300005439\|Ga0070711_101909886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005454\|Ga0066687_10903285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300005610\|Ga0070763_10471655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300005764\|Ga0066903_105776556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300005921\|Ga0070766_11144860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300006041\|Ga0075023_100418256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300006046\|Ga0066652_101421760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300006804\|Ga0079221_10748951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300006854\|Ga0075425_102905690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300006871\|Ga0075434_101275735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300006954\|Ga0079219_10824169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734	Open in IMG/M
3300007076\|Ga0075435_100386543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300007982\|Ga0102924_1198866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300009098\|Ga0105245_11443502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300009177\|Ga0105248_11010712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300010048\|Ga0126373_12059315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300010154\|Ga0127503_10456749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300010376\|Ga0126381_105053627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300010379\|Ga0136449_100561372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1959	Open in IMG/M
3300010400\|Ga0134122_10235418	Not Available	1539	Open in IMG/M
3300010403\|Ga0134123_10324137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1378	Open in IMG/M
3300010867\|Ga0126347_1149235	Not Available	574	Open in IMG/M
3300010867\|Ga0126347_1259232	Not Available	558	Open in IMG/M
3300010867\|Ga0126347_1373442	Not Available	530	Open in IMG/M
3300010876\|Ga0126361_10447647	Not Available	1022	Open in IMG/M
3300012200\|Ga0137382_11192667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300012350\|Ga0137372_10406313	Not Available	1030	Open in IMG/M
3300012958\|Ga0164299_10949338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300012958\|Ga0164299_11303765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300012960\|Ga0164301_10520777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300013306\|Ga0163162_10356935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1594	Open in IMG/M
3300014968\|Ga0157379_10402024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1259	Open in IMG/M
3300015241\|Ga0137418_10047777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin345	3936	Open in IMG/M
3300015372\|Ga0132256_100920602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300015372\|Ga0132256_101298281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300015374\|Ga0132255_101639076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300016270\|Ga0182036_11799569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300016357\|Ga0182032_11239005	Not Available	643	Open in IMG/M
3300018035\|Ga0187875_10568546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300021181\|Ga0210388_10569921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	991	Open in IMG/M
3300021181\|Ga0210388_10689168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300021401\|Ga0210393_11441513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300021402\|Ga0210385_10410671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300021403\|Ga0210397_10465816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300021404\|Ga0210389_11173677	Not Available	592	Open in IMG/M
3300021405\|Ga0210387_10213712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1677	Open in IMG/M
3300021405\|Ga0210387_11135057	Not Available	681	Open in IMG/M
3300021406\|Ga0210386_11802830	Not Available	503	Open in IMG/M
3300021407\|Ga0210383_10567947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300021407\|Ga0210383_10865732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300021420\|Ga0210394_11799684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300023090\|Ga0224558_1244805	Not Available	517	Open in IMG/M
3300025922\|Ga0207646_10693053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300025929\|Ga0207664_10925987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300027173\|Ga0208097_1016135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300027824\|Ga0209040_10014070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5441	Open in IMG/M
3300027895\|Ga0209624_10850289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300027910\|Ga0209583_10378329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300028877\|Ga0302235_10175505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300028879\|Ga0302229_10522758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300028906\|Ga0308309_11300230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300028906\|Ga0308309_11427501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300029910\|Ga0311369_10811537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300030057\|Ga0302176_10411969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300030503\|Ga0311370_12341361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300030524\|Ga0311357_11164796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300030580\|Ga0311355_11479447	Not Available	587	Open in IMG/M
3300031018\|Ga0265773_1033077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300031092\|Ga0308204_10191637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300031543\|Ga0318516_10643486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300031543\|Ga0318516_10744973	Not Available	555	Open in IMG/M
3300031561\|Ga0318528_10178641	Not Available	1134	Open in IMG/M
3300031713\|Ga0318496_10179957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1160	Open in IMG/M
3300031718\|Ga0307474_11621996	Not Available	508	Open in IMG/M
3300031723\|Ga0318493_10149312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1208	Open in IMG/M
3300031724\|Ga0318500_10573027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea phyllanthi	571	Open in IMG/M
3300031736\|Ga0318501_10837725	Not Available	510	Open in IMG/M
3300031754\|Ga0307475_11041681	Not Available	642	Open in IMG/M
3300031793\|Ga0318548_10159755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1100	Open in IMG/M
3300031796\|Ga0318576_10588111	Not Available	524	Open in IMG/M
3300031805\|Ga0318497_10577073	Not Available	631	Open in IMG/M
3300031820\|Ga0307473_10617008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300031820\|Ga0307473_11277095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300031832\|Ga0318499_10420297	Not Available	511	Open in IMG/M
3300031890\|Ga0306925_11137105	Not Available	787	Open in IMG/M
3300031910\|Ga0306923_10583087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300031912\|Ga0306921_11118446	Not Available	882	Open in IMG/M
3300031947\|Ga0310909_10698791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300032008\|Ga0318562_10855066	Not Available	520	Open in IMG/M
3300032010\|Ga0318569_10526454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300032044\|Ga0318558_10312296	Not Available	778	Open in IMG/M
3300032052\|Ga0318506_10446399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300032076\|Ga0306924_10143919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2727	Open in IMG/M
3300032089\|Ga0318525_10691504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300032094\|Ga0318540_10641803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300032896\|Ga0335075_11106642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia arthritidis	698	Open in IMG/M
3300034819\|Ga0373958_0137970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.09%
Host-Associated	Host-Associated	9.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.68%
Plants	Host-Associated → Plants	9.91%
Aquatic	Environmental → Aquatic	5.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.11%
Peat	Environmental → Terrestrial → Peat	7.21%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Sediment	Environmental → Aquatic → Sediment	1.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.80%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.46%
Loam	Environmental → Terrestrial → Soil → Loam	17.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.90%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.60%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.90%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_00644210	2170459024	Grass Soil	QESFEVIVLALVDTARTKLPAIELLLGARAGKFPVAPRPDHDLNAAAEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILAIGRQEGSKLAHVVGRDPVQRLRRQWGQRLIVFPNGSPQS
JGI24140J50213_101848831	3300003369	Arctic Peat Soil	ASTHQARLPAMELLLGAQVGKFPVAPRPRYDVGAAAQHRMNLAVRHLTTIGCAASGFVSDEEHLMKAVRSEIGSRDYAAVLLVTGRQRGSWLARGLHLDPVHQLRRRLGQRLIVFPIGPGAPHPTLPS*
Ga0066823_100447342	3300005163	Soil	VRSSLANTRQVRLPAAELLLGAGAGKFPVAPQPSHNLGAAAEHRLNLAVRHLKTIGIEASGLISDEEDLVKAVRSEIRSQDYAAVLLVTGRQRGSWLARRLHLDPVHRLRRRLGRRLVVFPLGPGAPRPTLSP*
Ga0066684_103113091	3300005179	Soil	KFPVAPQPSHNLGAAAEHRLNLAVRHLKTIGCEASGLISDEEDLVKAVRSETRSHDYAAVLLVTGRQRGSWLARRLHLDPVHRLRRRLGPRLVVFPLGAGAPRPTLSS*
Ga0066388_1073811271	3300005332	Tropical Forest Soil	CEVVVMSLVRSRQARLPAMELLLGARAGKFPVAPQPDHDIGAAAEHRMSLAIRHLTTIGCQASGLLSDENDLMKAVLSETRRHDYDEVILAVGRQGGSWLARGLRLDPIHQLQRRLRRRLIVFPLGPAAPDPMPPG*
Ga0070682_1018364041	3300005337	Corn Rhizosphere	VVMSLVRSRQARLPAMELVLGAHSGKFPVAPQPDHDISAAAEHRMNLAVRHLKTIGCQASGLLSDEGDLVKAVRAETRRHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTPPA*
Ga0070714_1008682562	3300005435	Agricultural Soil	QEPCEVVVMSLVRSRQERLPAMELLLGARVGKFPVSPRPDHDIGAEAEHRMNLAIRHLTTIGCPASGLLNDDDDLVEAVRSETRRHDYDEVILATGRQGSSSLARALHLDPVHRLRRRLGQRLIVFPRSPVAPAV*
Ga0070713_1014985651	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VVVMSLVRSRQERLPAMELLLGARVGKFPVAPRPDHDIGAEAEHRMNLAIRHLTTIGCRASGLLNDDDDLVEAVRSETRRHDYDEVILATGRQGGSSLARALHLDPVHRLRRRLGQRLIVFPRSPVAPAV*
Ga0070713_1019778352	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EVVVMSLVRSRQARLPAMELVLGARSGKFPVTPQPDHDISAAAEHRMNLALRHLKTIGCPASGLLSDEHDLVKAVRSETQRHNYDEVILATGRQGGSSLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPAPPA*
Ga0070711_1010256941	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PCEVVVMSLVRSRQARLPAMELVLGAHSGKFPVAPQPDHDISAAAEHRMNLAVRHLKTIGCRASGLISDEDLVKAVHSETRRHEYDKVILATGRESGRWLARALRLDPVHQLRRRIGQRLIIFPPGPGTSHSRS*
Ga0070711_1019098861	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GPRCSQEVRSSRAGHNLGAAAEHRLNLAVRHLKTIGCEASGLISDEEDLVKAVRSETRSHDYAAVLLVTGRQRGSWLARGLHLDPVHRLRRRLGPRLVVFPLGPGAPRPTLSS*
Ga0066687_109032852	3300005454	Soil	LVRSRQARLPAMELVLGARSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEDDLVKAVRSETRRHDYDEVILATGRQDGSSLARGLHLDPIHQLRRRFGQRLIVFPHSQEAPHPAPPA*
Ga0070763_104716551	3300005610	Soil	GKFPVAPRPDHDLNAAAEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILATGRQEGSKLAHVVGQDPVQRLRRQWGQRLIVFPNGSPQS*
Ga0070764_101024851	3300005712	Soil	VLSLASQAQTKLPAMELLLGAKVGKMPIAPRPDHDIAKEAENRMNLAVRHLTTIGCQASGIISDDDLAPAVRAETRAHDYDELILATGRQEGSPLVRALHLDPVHQLRRRWGSRLKVFSTPAA*
Ga0066903_1057765562	3300005764	Tropical Forest Soil	VGKFPVAPKPDHDVSAAAEHRMNLAVRHLKTIGCRANGIISDQELVKAVRSETRGRSYDEVILATGRQGGTWLAGLLGRDPVHRLRRRWGRQLIVFAEGPETTHI*
Ga0070766_111448602	3300005921	Soil	TAQTKLPAIELLLGARVGKFPVAPRPDHDLNAAAEHRMNLAIRHLKTIGCRASGLLSEEELVKAVRAETRRHDYDEVILATGRQEGSKLAHVVGRDPVQRLRRQWGQRLIVFPNSPLKAEPGPGA*
Ga0075023_1004182561	3300006041	Watersheds	VVMSLTWTRQARLPAMELLLGARAGKFPVAPRPDHDISVDAEHRMNLAAQHLKTIGCQVSGLISDENDLVKAVRSETRRHEYDEVILATGRQRGSWLARSLHLDPVHQLRRRLEQRLVVFPLGPGPPHPIPSS*
Ga0066652_1014217601	3300006046	Soil	ARLPAMELVLGARSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEDDLVKAVRSETRRHDYDEVILATGRQDGSSLARGLHLDPIHQLRRRFGQRLIVFPHSQEAPHPAPPA*
Ga0070765_1000352291	3300006176	Soil	VLSLASQAQTKLPAMEMLLGAKVGKMPIAPKPDHDIAKEAENRMNLAVRHLTTIGCETSGIISDDDLAPAVRAETRAHDYDELILATGRQEGSPLARALHLDPVHQLRRRWGSRLTVFATSAA*
Ga0079221_107489512	3300006804	Agricultural Soil	VRLPAAELLLGAPVGKFPVAPQPSHNLGAAAEHRLNLAVRHLKTIGCEASGLISDEEDLVKAVRSETRSQDYAAVLLVTGRQRGSWLARRLHLDPVHRLRRRLGRRLVVFPLGPGAPRPTL*
Ga0075425_1029056901	3300006854	Populus Rhizosphere	VGKFPVAPQPSHNLGAAAEHRLNLAVRHLKTIGCEASGLISDEEDLVKAVRSETRSHDYAAVLLVTGRQRGSWLAQRLHLDPVHRLRRRLGRRLVVFPLGPGAPRPTLSP*
Ga0075434_1012757352	3300006871	Populus Rhizosphere	AAELLLGAPVGKFPVAPQPSHNLGAAAEHRLNLAVRHLKTIGCEASGLISDEEDLVKAVRSETRSHDYAAVLLVTGRQRGSWLARGLHLDPVHRLRRRLGPRLVVFPLGPGAPRPTLSS*
Ga0079219_108241692	3300006954	Agricultural Soil	PAMELLLGARVGKFPVSPRPDHDIGAEAEHRMNLAIRHLTTIGCPASGLLNDDDDLVEAVRSETRRHDYDEVILATGRQGSSSLARALHLDPVHRLRRRLGQRLIVFPRSPVAPAV*
Ga0075435_1003865431	3300007076	Populus Rhizosphere	RLPAMELLLGARVGKFPVSPRPDHDIGAEAEHRMNLAIRHLTTIGCPASGLLNDDDDLVEAVRSETRRHDYDEVILATGRQGSSSLARALHLDPVHRLRRRLGQRLIVFPRSPVAPAV*
Ga0102924_11988661	3300007982	Iron-Sulfur Acid Spring	LPAMELVLGASSGKFPVAPQPDHDISAAAEHRMNLAVQHLKTIGCQASGLISDEDPVKAVRREARGHDYDEVILATGRQPGSWLARVMRRDPVHQLRRQWGQRLVVFSASPATTGPTTR*
Ga0105245_114435021	3300009098	Miscanthus Rhizosphere	VLGAHSGKFPVAPQPDHDISIAAEHRMNLAVRHLKTIGCQASGLLSDEGDLVKAVRAETRRHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLIVFPHGPDAPDPTPPA*
Ga0105248_110107121	3300009177	Switchgrass Rhizosphere	MELVLGARSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEDDLVKAVRSETRRHDYDEVILATGRQGGSSLARGLHLDPVHQLRRRLGQRLIVFPHGPDAPDPTPPA*
Ga0126373_120593151	3300010048	Tropical Forest Soil	QPCEVTVLSLVDTSQARLPAAELLLGAQVGKFPVAPRPAHDVSAAAEHRLNLAVRHLKTIGCRANGIISDQELVKAVQAETRGSGYDEVILATGRQGGTWLAGLLGRDPIHRLRRRWGRQLIVFGKGPEKTHT*
Ga0127503_104567491	3300010154	Soil	LGARVGKFPVAPQPDHDISAAAEHRMNLAVRHLKTIGCQASGLLSDEDDLVKAVRSETARHDYDEVILTTGGQGGSSLARGLHLDPVHQLRRRLGQRLIVFPHGPDAPDPTPPA*
Ga0126381_1050536271	3300010376	Tropical Forest Soil	VDTSQGRLPAAELLLGAQIGKFPVAPKPDHDVSAAAEHRLNLAVRHLKTIGCQANGIISDQDLVKAVNAETRGRGYDEVILATGRQRGTWLAGLLGRDPVHRLRRRWGRQLIMFAQAQGDGA*
Ga0136449_1005613721	3300010379	Peatlands Soil	LVDTAQTKLPAIELLLGARVGKFPVAPRPDHDLNAAAEHRMNLAIRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILAIGRQEGSKLAHVVGQDPVQRLRRQWGQRLIVFPNGPPQS*
Ga0134122_102354181	3300010400	Terrestrial Soil	QARLPAMELVLGAHSGKFPVAPQPDHDISTAAEHRMSLAVRHLKTIGCQASGLLSDEGDLVKAVRAETRRHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLIVFPHSPDAPDSTA*
Ga0134123_103241372	3300010403	Terrestrial Soil	MELVLGARSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEDDLVKAVRAETRRHDYDEVILATGRQGASPLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPAPPA*
Ga0126347_11492351	3300010867	Boreal Forest Soil	TELLLGAQSGKFPVAPRPSYNLGAAAEHRMNLTVRHLTAIGCQASGFIGDEESLVKAVMSEVRSRDYAAVLLVSGHPRGSALSRWLRLDPVSQLRRRLGQRLVVFPLGPEAPHPFLPS*
Ga0126347_12592321	3300010867	Boreal Forest Soil	PGEVVVMSLVRSRQAKLPAMELLLGASSGKFPVAPQPDHDISAAAEHRMNLAVRHLKTIGLQATGLLSDEDDLVKAVLAETSRHDYDEVILATGAQGGSALARGLHLDPIHQLRRRLGARLIVFPPGLGAPEGTPPA*
Ga0126347_13734421	3300010867	Boreal Forest Soil	SKTKLPTAELLLGAQMGKFPVAPRPDHDICAAAEHHMDLAVSHLNTLGYKASGLISDEDLVDAVRSETRSHDYDRVILATGRHEGSWLARTRGRDPVHKLRRQWGQRLIIFSPGSGTTLAAPGS*
Ga0126361_104476471	3300010876	Boreal Forest Soil	QARLPATELLLGAQSGKFPVAPRPSYNLGAAAEHRMNLTVRHLTAIGCQASGFIGDEESLVKAVMSEVRSRDYAAVLLVSGHPRGSALSRWLRLDPVSQLRRRLGQRLVVFPLGPEAPHPFLPS*
Ga0137382_111926672	3300012200	Vadose Zone Soil	MELVLGARSGKFPIAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEHDLVKAVRSETRRHDYDEVILATGRQGASPLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTA*
Ga0137372_104063132	3300012350	Vadose Zone Soil	MELVLGAQVGKFPVAPQADHDISAAAEHRMNLAVRRLKTLGCQASGMISDQDLVKAVRAETASHDYDEVILATGRQEGSGLARFVGRDPVQQLRRKWGERLIVFPEDRRQESTS*
Ga0164299_109493381	3300012958	Soil	MELVLGARAAKFPVAPHPEHDISAAAEHRMQLAVRHLKTIGCQASGLLSDEGDLVKAVRSETWRHDYDEVILATGRQGASPLARGLHLDPAHQLRRRLGQRLIVFPRGPDAPAPTPLA*
Ga0164299_113037651	3300012958	Soil	QARLPAMELVLGARVGKFPVAPRPDHDITAAAEHRMNLALRHLKTIGCQASGLLSDEDDLVKAVRAETKRHDYDEVILATGRQGSTSLARGLHLDPVHQLRRRLGQRLIVFPRGPGATHPTPPA*
Ga0164301_105207772	3300012960	Soil	ELVLGAHSGKFPVAPQPDHDISAAAEHRMNLAVRHLKTIGCQASGLLSDEGDLVKAVRAETRRHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTPPA*
Ga0163162_103569353	3300013306	Switchgrass Rhizosphere	MELVLGAHSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEGDLVKAVRAETRRHDYDEVILATGRQGASPLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTPTA*
Ga0157379_104020242	3300014968	Switchgrass Rhizosphere	MELVLGAHSGKFPVAPQPDHDISTAAEHRMSLAVRHLKTIGCQASGLLSDEDDLVKAVRAETRRHDYDEVILATGRQGASPLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTPTA*
Ga0137418_100477771	3300015241	Vadose Zone Soil	MELVLGARSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEDNLVKAVRSETQRHVYDEVILATGGQGGSSLARGLRLDPIHQLRRRLGQRLIVFPRSPDAPDPTA*
Ga0132256_1009206021	3300015372	Arabidopsis Rhizosphere	PCEAVVLSLANTRQVRLPAAELLLGAQVGKFPVAPQPSHNLGDAAEHRLNLAMRHLKTIGCEASGLISDEEDLVKAVLTEIRSGDYAAVLLVTGRQRGSWLAGHLHLDPVHRLRRRLGPRLVVFPLGPGAPRPTLSP*
Ga0132256_1012982812	3300015372	Arabidopsis Rhizosphere	ARSGKFPVAPQPDHDISTAAEHRMNLAIGHLKTIGCQASGLLSDEHDLVKAVRSETRRHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLVVFPRGPGAPHPTPLV*
Ga0132255_1016390761	3300015374	Arabidopsis Rhizosphere	AMELVLGARSGKFPVAPQPDHDISTAAEHRMNLAIGHLKTIGCQASGLLSDEDDLVKAVRSETQRHDYDEVILATGRQGGSSLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTPPA*
Ga0182036_117995692	3300016270	Soil	ELLLGAPVGKFPVAPRPDHDINAAAEHRMHLAVRHLKAIGCQASGLISDEPLLKAVRAETRGHDYDEVVLATGRAENPRLARVFSQDPVSRLRRRWRQRLIVFSGPGHIEDR
Ga0182032_112390051	3300016357	Soil	AQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLVKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGERLILFPDGHRRESPS
Ga0187875_105685462	3300018035	Peatland	GKFPVAPRPSHDISAAAEHRMDLAVRHLKAIGCRADGIISDEDDLVKAVRFETGGHDYATVILATVRHRGSRLLRTLRLDAVHRLRRRLGKRLVVFPLGPDAPHPTLAP
Ga0210395_101235781	3300020582	Soil	LPAMELLLGANIGKFPVAPPADHDVSAAAEHRMTLAVRHLTAIGCRASGIISDDDLIKAVRAETRRHDYDRLIVATNGQRGSWLARLLRVDPVHLLRWRWRQRLVAFPLGPAQHG
Ga0210388_105699211	3300021181	Soil	FEVTVLALVDTAQTKLPAIELLLGARVGKFPVAPRPDHDLNAAAEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILATGRQEGSKLAHVVGQDPVQRLRRQWGQRLIVFPNGSPQS
Ga0210388_106891681	3300021181	Soil	NRQKKLPSMELLLGAQVGKFPVAPTPDHDVSSAAEHRMNLAVQHLKAIGCQASGVISDEELVQAVRSESSGHHYDQVILAIGRQDGSKLARALHLDPVHKLRRRWDNRLVVFSGGDA
Ga0210393_114415131	3300021401	Soil	FEVIVLALVDTARTKLPAIELLLGARAGKFPVAPRPDHDLNAAAEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILATGRQEGSKLAHIVGQDPVQRLRRQWGQRLIVFPNGSPRS
Ga0210385_104106711	3300021402	Soil	PAIELLLGARSGKFPVTPQPDHDVGAAAEHRMNLAVRHLRTIGCGASGLVSDQALGKAVRSETASHDYDEVILATGRQGSPGLARIMGLDPVQQLRRKWGKRLTVFQKSHREESPD
Ga0210397_104658161	3300021403	Soil	KLPAAELLLGARAGKFPVAPQPGHDLNAATEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILATGRQQGSKLAHVVGRDPVQRLRRQWGQRLIVFPKGSGGEE
Ga0210389_111736771	3300021404	Soil	TKLPATELLLGAQSGKFPVAPRPSYNLGAAAGHRMDLTVRHLTAIGCQASGFIGDEESLVKAVMSEVRSKDYAAVLLVSGHPRGSALSRWLRLDPISQLRRRLGQRLVVFPLGPDAPHPFLPS
Ga0210387_102137121	3300021405	Soil	AGKFPVAPRPDHDLNAAAEHRMNLAIRHLKTIGCQASGLLSEEELVKAVRAETHRHDYDEVILATGRQEGSKLAHVVGRDPVQRLRRQWGQRLIVFPNGPPQS
Ga0210387_111350572	3300021405	Soil	TRLPATELLLGAQSGKFPVAPRPSYNLGAAAGHRMDLTVRHLTAIGCQASGFIGDEESLVKAVMSEVRSKDYAAVLLVSGHPRGSALSRWLRLDPISQLRRRLGQRLVVFPLGPDAPHPFLPS
Ga0210386_118028301	3300021406	Soil	VLALVDTARTKLPAIELLLGARAGKFPVAPRPDHDLNAAAEHRMNLAVRHMKTIGCQASGLLSEEELVKAVRAETGRHDYDKVILATGRQEGSKLAHIVGRDPVQRLRRQWGQRLIVFPNGSPQS
Ga0210383_105679471	3300021407	Soil	DTARTKLPAIELLLGARAGKFPVAPRPDHDLNAAAEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRSETRRHDYDEVILAIGRQEGSKLAHIVGRDPVQRLRRQWGQRLIVFPNGSPQS
Ga0210383_108657321	3300021407	Soil	ARTKLPAIELLLGARAGKFPVAPRPDHDLNPAAEHRMNLAVRHLKTIGCRASGLLSEEDLVKAVRAETRRHDYDEVILAIGRQDGSKLAHVVGQDPVQRLRRQWGQRLIVFPNGSPQS
Ga0210394_117996841	3300021420	Soil	PCEVVVLSLAEIRQTKLPAMELVLGARSGKFPVAPQADHDIAAAAEHRMNLAVRHLRTIGCQASGLISDQDLVKAVRTESGIHDYDEVILATGRQDSSRLGHVLGRDPVQQLRRKWGERLIVFPEGHPQESPS
Ga0224558_12448051	3300023090	Soil	MELLLGARAGKFPVAPRPSHDISAAAEHQMNLAVRHLKTIGCRADGIISDENDLVKAVRFEMGGHDYAKVILATGRHRGSRLLRTLRLDAVHRLRRRLGKRLVVFPLGPDAPHPTLAP
Ga0207646_106930531	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LELALGAATGHATSGPAKFPTAPRPDHDVGATAERRMDLAVRHLKTIGCQASGLISDQDLVKAVRAETASHEYDEVILAIGRQDSSRLGRLIGRDPVQQLRHKWGKRLIEFPEGRRQASP
Ga0207664_109259872	3300025929	Agricultural Soil	RQEQEPCEVVVMSLVRSRQERLPAMELLLGARVGKFPVSPRPDHDIGAEAEHRMNLAIRHLTTIGCPASGLLNDDDDLVEAVRSETRRHDYDEVILATGRQGSSSLARALHLDPVHRLRRRLGQRLIVFPRSPVAPAV
Ga0208097_10161352	3300027173	Forest Soil	RLPAMELVLGARSGKFPVAPQPDHDVSAAAEHRMELAVRHLKTIGCQASGMLSDEDDMVKAVRSETDHHDYDEVILATGSQGGSSLARGLHLDPIHQLRRRLGARLIVFRPGPGVPHRTLPA
Ga0209330_10628312	3300027619	Forest Soil	LSLAGTAQQKLPAMELLLGAQVGKLPIAPPPDHDVSASAEHRMNLAVRQLKMIGCRASGIVSDEDLVPAVRAETRSHAYDGLIVATGMQGGSRLARLLHLDPVHQLRWHWGKRLTVFEGAPVTP
Ga0209040_100140706	3300027824	Bog Forest Soil	GKFPVTPRPDHDIGAAAEHRMNLAVQHLKAIGCRAEGIISDEDDLVKAVRFETRSHDYAHVVLATGRQHGSRLARTLHLDAVHRLRRRLGQRLVVFPLGPDAPHPTLAP
Ga0209624_108502891	3300027895	Forest Soil	QEQESFEVIVLALVDTARTKLPAIELLLGARAGKFPVAPRPDHDLNAAAEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILATGRQEGSKLAHVVGRDPVQRLRRQWGQRLIVFPNGSPQS
Ga0209583_103783291	3300027910	Watersheds	CDVVVLSLVSTRQARMPSMELLLGARGGVFPRAPRPDYDVSAAAEHRMDLAVQHLQTIGCRASGLISDKDLVKAVHSETRRHEYDEVILATGRQRGSWLARSLHLDPVHQLRRRLEQRLVVFPLGPGPPHPIPSS
Ga0302235_101755051	3300028877	Palsa	SQARLPAMEMLLGAQIGKFPIAPRADHDISAAAEHRMNLAVQHLTTIGCQASGLISDEDLVRAVNAETRAHDYDEVILAAGRQGGRGLAHAAHLDPIHRLRRRLGNRLVVFPLDPATAGPAS
Ga0302229_105227581	3300028879	Palsa	AMEMLLGAQIGKFPIAPRADHDISAAAEHRMNLAVQHLTTIGCQASGLISDEDLVRAVNAETRAHDYDEVILAAGRQGGRGLAHAAHLDPIHRLRRRLGNRLVVFPLDPATAGPAS
Ga0308309_113002301	3300028906	Soil	SRQARLPAMELVLGARSGKFPVAPQPDHDISAAAEHRMNLAIRHLKTIGCQASGLLSDEDDLVKAVRSETRRHDYDEVILATGRQGGSSLARGLRRDPIHQLRRRLGARLIVFPPGPGAPHRTPSA
Ga0308309_114275011	3300028906	Soil	TELLLGARSGKFPVAPQPDHDVSAAAEHRMNLAVRHVKTIGCQASGLISDADLVKAVRSETRGHEYDGVILSTGRQESPWLARVMGRDPVHQLRRQWGQRLIVFPPSSGTKHSSPAS
Ga0311369_108115371	3300029910	Palsa	PCEVVVLSLVSTSQARLPAMEMLLGAQIGKFPIAPRPDHDTSAAAEHRMNLAVQHLTTIGCQASGLISDENLVRAVTSETRAHEYDEVILATGGQGGSGLVQAAHLDPIHQLRRRLRKRLIVFPLGPAAAHPAS
Ga0302176_104119691	3300030057	Palsa	ARLPAMEMLLGAQIGKFPIAPRADHDISAAAEHRMNLAVQHLTTIGCQASGLISDEDLVRAVNAETRAHDYDEVILAAGRQGGRGLAHAAHLDPIHRLRRRLGNRLVVFPLDPATAGPAS
Ga0311370_123413612	3300030503	Palsa	RQERHPCEVVVLSLVSTSQARLPAMEMLLGAQIGKFPIAPRADHDISAAAEHRMNLAVQHLTTIGCQASGLISDEDLVRAVNAETRAHDYDEVILAAGRQGGRGLAHAAHLDPIHRLRRRLGKRLIVFPLDPATAGPAS
Ga0311357_111647962	3300030524	Palsa	LPAMELLLGARVGKFPVAPRPDHQISAAAEHRMNLAVEHLKALGCQAEGIISDDDDLLKMVRAETRSQDYAKVILATGRRRGSVLARGLHLDPIHRLRWRLGERLVVFPQGPEAPHPTLT
Ga0311355_114794471	3300030580	Palsa	TSSANLPAMELLLGARVGKFPVAPRPDHQISAAAEHRMNLAVEHLKALGCQAEGIISDDDDLLKMVRAETRSQDYAKVILATGRRRGSVLARGLHLDPIHRLRWRLGERLVVFPQGPEAPHPTLTA
Ga0265773_10330771	3300031018	Soil	SLGRLVEQLLLGARAGKFPVAPRPDHDLNAAAEHRMNLAVRHLKTIGCQASGLLSEEELVKAVRAETRRHDYDEVILATGRQEGSELAHVVGQDPVQRLRRQWGQRLIVFPKGSPQS
Ga0308204_101916372	3300031092	Soil	LGAQSGKFPVAPQPDHDISTAAEHRMKLAVRHLKTIGYQASGLLSDEDDLVKAVRSETRRHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPAPPA
Ga0318516_106434862	3300031543	Soil	QVLVMSLVWTRQARLPAMELLLGARAGKFPMASRPDHDSSAAAEHRMNLAIRYLNTLGCQASGLISDENDLVKAVRSETRRHDYDEVILATGRQRGSWLARELRLDPVHQLRWRLGQRLIVFPLGPRAPHPTLSS
Ga0318516_107449731	3300031543	Soil	LGAQAGKFPVTPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLLKAVRAETASHEYDEVILATGRQKGSGLARIVAQDPVQRLRRKWGERLIVFPEGHRQKSPS
Ga0318528_101786412	3300031561	Soil	VLSLVDTSQTKLPAMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLDKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGERLILFPDGHRRESPS
Ga0318496_101799571	3300031713	Soil	MELLLGAPVGKFPVAPRPDHDISAAAEHRMNLAVRHLKAIGCQASGLISDEPLLKAVRAETRGHDFDEVVLATGRAENTRLARVFSQDPVSRLRRRWRQRLIVFSGPRYIEDR
Ga0307474_116219961	3300031718	Hardwood Forest Soil	GARVGKFPVTPRPDHDIAAAAGHRMNVAVRNLRVIGCQASGIIVDEDNLVKAVRSETRGHDYAAVVLATGRPRGSRLARALHVDPVHQLRRRLGERLVVFPYGPGAPHPTLLPEA
Ga0318493_101493123	3300031723	Soil	VLVMSLVWTRQARLPAMELLLGARAGKFPMASRPDHDSSAAAEHRMNLAIRYLNTLGCQASGLISDENDLVKAVRSETRRHDYDEVILATGRQRGSWLARELRLDPVHQLRWRLGQRLIVFPLGPRAPHPTLSS
Ga0318500_105730271	3300031724	Soil	VVLSLVDTSQTKLPAMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTLGCQASGVISDQDLDKAVRAETASHQYDEVILATGRQKGSGLARIVGQDPVQRLRRKWGERLILFPDGHRQESPG
Ga0318501_108377251	3300031736	Soil	LALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTLGCQASGVISDQDLDKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGQRLILFPDGHRQGSPS
Ga0307475_110416811	3300031754	Hardwood Forest Soil	QEREPCEVTVLSLVDTRQTHLSGMELALGAPVGKFPVAPRPDHDINAEAQHRLNLATRHIKTIGCQASGLISDEPLLKAVRAEARSHDFDEIILATGRQESTLLARLLGQDPVHRLRRRWGRRLIVFSQPASHATLS
Ga0318548_101597552	3300031793	Soil	VTVLSLVDTRQTRLPAMELLLGAPVGKFPVAPRPDHDINAAAEHRMHLAVRHLKAIGCQASGLISDEPLLKAVRAETRGHDYDEVVLATGRAENPRLARVFSQDPVSRLRRRWRQRLIVFSGPGHIEDR
Ga0318576_105881112	3300031796	Soil	EVVVLSLVDTSQTKLPAMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTLGCQASGVISDQDLDKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGQRLILFPDGHRQGSPS
Ga0318497_105770732	3300031805	Soil	PAMELALGAQAGKFPVTPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLLKAVRAETASHEYDEVILATGRQKGSGLARIVAQDPVQRLRRKWGERLIVFPEGHRQKSPS
Ga0307473_106170081	3300031820	Hardwood Forest Soil	LGAQAGKFPVAPRPDHDISAAAEHRMNLAVRHLQTIGCQASGLVSDQGLVKAVRAETASHDYDEVILATGRQEGSGLARIMGRDPVQQLRRKWGQRLIVFPEGHRQGSPS
Ga0307473_112770952	3300031820	Hardwood Forest Soil	RQARLPAMELVLGARSGKFPVAPQPDHDISTAAEHRMNLAVRHLKTIGCQASGLLSDEDDLVKAVRSETERHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTPPA
Ga0318499_104202971	3300031832	Soil	LPAMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLVKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGERLILFPDGHRRESPS
Ga0306925_111371051	3300031890	Soil	EVVVLSLVDTSQTKLPAMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLLKAVRAETASHEYDEVILATGRQKGSGLARIVAQDPVQRLRRKWRERLIVFPEGHRQKSPS
Ga0306923_105830871	3300031910	Soil	ELLLGARVGKFPVAPRPDHDISAAAEHRMNLAIRYLNTLDCQASGLVSDENNLVKAVRSETRRHDYDEVILATGRQRGSWLARELRLDPVHQLRWRLGQRLIVFPLGPRAPHPTLSS
Ga0306921_111184462	3300031912	Soil	AMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLVKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGERLILFPDGHRRESPS
Ga0310909_106987912	3300031947	Soil	EQEPCEVVVLSLVDTSQTKLLAMELALGAQAGKFPVTPKPEHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLVKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGERLILFPDGHRRESPS
Ga0318562_108550661	3300032008	Soil	PAMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLVKAVRAETASHQYDEVILATGRQKGSGLARIAGQDPVQRLRRKWGERLILFPDGHRRESPS
Ga0318569_105264542	3300032010	Soil	LGAQAGKFPVAPRPDHDIGAAAGHRMDRAVRHLTMIGCQASGLISDRDLVKAVRAETACHDYDEVILATGRQGSSWLARMTGQDPVQRLRRQWGERLTVFAGGSRRR
Ga0318558_103122962	3300032044	Soil	LSLVDTSQTKLPAMELALGAQAGKFPVAPKPKHDISAAAEHRMNLSVRHLKTIGCQASGVISDQDLLKAVRAETASHEYDEVILATGRQKGSGLARIVAQDPVQRLRRKWRERLIVFPEGHRQKSPS
Ga0318506_104463991	3300032052	Soil	RQARLPAMELLLGARAGKFPVASRPDHDISAAAEHRMNLAIRYLNTLGCQASGLISDENDLVKAVRSETRRHDYDEVILATGRQRGSWLARELRLDPVHQLRWRLGQRLIVFPLGPRAPHPTLSS
Ga0306924_101439191	3300032076	Soil	EVLVMSLVWTRQARLPAMELLLGARAGKFPVASRPDHDISAAAEHRMNLAIRYLNTLGCQASGLISDENDLVKAVRSETRRHDYDEVILATGRQRGSWLARELRLDPVHQLRWRLGQRLIVFPLGPRAPHPTLSS
Ga0318525_106915041	3300032089	Soil	QVLVMSLVWTRQARLPAMELLLGARVGKFPVAPRPDHDISAAAEHRMNLAIRYLNTLDCQASGLVSDENNLVKAVRSETRRHDYDEVILATGRQRGSWLARELRLDPVHQLRWRLGQRLIVFPLGPRAPHPTLSS
Ga0318540_106418031	3300032094	Soil	VVVLSLADTSQTKLPAMELALGAQAGKFPVAPRPDHDIGAAAGHRMELAVRHLKTIGCQASGLISDQDLVKAVRAETAGQHYDEVILATGRQDSSWLARMTGRDPVPRLRRRWGKRLVVFPGGSRRR
Ga0335075_111066421	3300032896	Soil	TRARSGCPPPSFFSARGRGSFPVAPQPSHNLGAAAEHRLNLAVRHLKTIGCEASGLISDEEDLVKAVRSETRNHDYAAVLLVTGRQRGSWAARGLHLDPVHRLRRLLGPRLIVFPLGAGAPRPTLSS
Ga0373958_0137970_197_553	3300034819	Rhizosphere Soil	MELVLGAHSGKFPVAPQPDHDISAAAEHRMNLAVRHLKTIGCQASGLLSDEGDLVKAVRAETRRHDYDEVILATGRQGASSLARGLHLDPVHQLRRRLGQRLIVFPRGPDAPDPTPPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences