Metagenome / Metatranscriptome Family F085957

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085957
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	100 residues
Representative Sequence	PCVGKAAIQKDLERYVADKSRRSTPLNTYVSGNVLVTRFEARSATIQKAGVDRIILWGIREMRGDKIASVRCCMPERTDSQTARFLEWEYAHPSTK
Number of Associated Samples	99
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.90 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	86.49 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.153 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (14.414 % of family members)
Environment Ontology (ENVO)	Unclassified (27.928 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.19% β-sheet: 31.45% Coil/Unstructured: 44.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
d.17.4.9: SnoaL-like polyketide cyclase	d1sjwa_	1sjw	0.59871
d.17.4.11: Hypothetical protein egc068 from a soil-derived mobile gene cassette	d1tuha_	1tuh	0.59679
d.17.4.9: SnoaL-like polyketide cyclase	d2geya1	2gey	0.58855
d.17.4.10: PhzA/PhzB-like	d3ec9a1	3ec9	0.57796
d.17.4.9: SnoaL-like polyketide cyclase	d3ebta1	3ebt	0.56637

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF02518	HATPase_c	8.11
PF13578	Methyltransf_24	5.41
PF00589	Phage_integrase	3.60
PF06055	ExoD	2.70
PF00072	Response_reg	1.80
PF14559	TPR_19	1.80
PF13365	Trypsin_2	0.90
PF04014	MazE_antitoxin	0.90
PF04366	Ysc84	0.90
PF08734	GYD	0.90
PF13502	AsmA_2	0.90
PF12276	DUF3617	0.90
PF01799	Fer2_2	0.90
PF13533	Biotin_lipoyl_2	0.90
PF00248	Aldo_ket_red	0.90
PF00144	Beta-lactamase	0.90
PF00563	EAL	0.90
PF09335	SNARE_assoc	0.90
PF13305	TetR_C_33	0.90
PF05170	AsmA	0.90
PF13545	HTH_Crp_2	0.90
PF03167	UDG	0.90
PF02878	PGM_PMM_I	0.90
PF00343	Phosphorylase	0.90
PF07152	YaeQ	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	2.70
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.90
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.90
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.90
COG4681	Uncharacterized conserved protein YaeQ, suppresses RfaH defect	Function unknown [S]	0.90
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.90
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.90
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.90
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.90
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.90
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.90
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.90
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.90
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.90
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.90
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.90
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.90
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.90
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
All Organisms	root	All Organisms	46.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
cellular organisms	root	All Organisms → cellular organisms	46.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.95 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.22 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	16.22 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.70 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	16.22 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.70 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.80 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	16.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.70 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.90 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.90 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	7.21 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.90 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.90 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.90 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.21 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	0.90 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.90 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.90 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.21 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Haloferax	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax	0.90 %
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	0.90 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.90 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.21 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Haloferax sulfurifontis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax sulfurifontis	0.90 %
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	0.90 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.90 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_12594063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	779	Open in IMG/M
3300001084\|JGI12648J13191_1008066	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300001166\|JGI12694J13545_1008953	Not Available	1135	Open in IMG/M
3300001593\|JGI12635J15846_10389657	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax sulfurifontis	843	Open in IMG/M
3300002245\|JGIcombinedJ26739_100660858	Not Available	923	Open in IMG/M
3300002245\|JGIcombinedJ26739_101197383	Not Available	649	Open in IMG/M
3300002245\|JGIcombinedJ26739_101411530	Not Available	590	Open in IMG/M
3300004099\|Ga0058900_1431906	Not Available	695	Open in IMG/M
3300004116\|Ga0058885_1192627	Not Available	727	Open in IMG/M
3300004118\|Ga0058886_1353257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	990	Open in IMG/M
3300004139\|Ga0058897_10383111	Not Available	902	Open in IMG/M
3300005557\|Ga0066704_10059771	Not Available	2428	Open in IMG/M
3300005712\|Ga0070764_10618090	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005712\|Ga0070764_11003822	Not Available	526	Open in IMG/M
3300006049\|Ga0075417_10635841	Not Available	545	Open in IMG/M
3300006102\|Ga0075015_100305526	Not Available	876	Open in IMG/M
3300006162\|Ga0075030_100438339	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1040	Open in IMG/M
3300006176\|Ga0070765_100072134	All Organisms → cellular organisms → Bacteria → Proteobacteria	2902	Open in IMG/M
3300006176\|Ga0070765_100601876	Not Available	1036	Open in IMG/M
3300006795\|Ga0075520_1357172	Not Available	595	Open in IMG/M
3300006854\|Ga0075425_101026353	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	940	Open in IMG/M
3300007076\|Ga0075435_100154828	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1928	Open in IMG/M
3300009029\|Ga0066793_10411348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300009157\|Ga0105092_10585237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
3300009162\|Ga0075423_10328586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1603	Open in IMG/M
3300009176\|Ga0105242_10684297	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300009523\|Ga0116221_1464633	Not Available	553	Open in IMG/M
3300009632\|Ga0116102_1090699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	890	Open in IMG/M
3300009643\|Ga0116110_1050644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1492	Open in IMG/M
3300011120\|Ga0150983_13149861	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1096	Open in IMG/M
3300011120\|Ga0150983_14008136	Not Available	827	Open in IMG/M
3300012918\|Ga0137396_10128306	All Organisms → cellular organisms → Bacteria → Proteobacteria	1833	Open in IMG/M
3300013297\|Ga0157378_13076486	Not Available	518	Open in IMG/M
3300014156\|Ga0181518_10056252	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300014158\|Ga0181521_10148545	Not Available	1351	Open in IMG/M
3300014159\|Ga0181530_10121661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1527	Open in IMG/M
3300014159\|Ga0181530_10519166	Not Available	591	Open in IMG/M
3300014167\|Ga0181528_10344434	Not Available	809	Open in IMG/M
3300014200\|Ga0181526_10523113	Not Available	750	Open in IMG/M
3300014326\|Ga0157380_12546284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	578	Open in IMG/M
3300014489\|Ga0182018_10016960	All Organisms → cellular organisms → Bacteria	4921	Open in IMG/M
3300014495\|Ga0182015_10066175	All Organisms → cellular organisms → Bacteria	2579	Open in IMG/M
3300014654\|Ga0181525_10720452	Not Available	560	Open in IMG/M
3300014657\|Ga0181522_11050967	Not Available	505	Open in IMG/M
3300014658\|Ga0181519_10305174	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300014658\|Ga0181519_10991082	Not Available	522	Open in IMG/M
3300016730\|Ga0181515_1418700	Not Available	655	Open in IMG/M
3300016750\|Ga0181505_11038699	Not Available	677	Open in IMG/M
3300017933\|Ga0187801_10242348	Not Available	723	Open in IMG/M
3300017940\|Ga0187853_10234225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	848	Open in IMG/M
3300017946\|Ga0187879_10023072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3828	Open in IMG/M
3300017959\|Ga0187779_10221286	Not Available	1190	Open in IMG/M
3300017998\|Ga0187870_1211060	Not Available	679	Open in IMG/M
3300018009\|Ga0187884_10440248	Not Available	524	Open in IMG/M
3300018032\|Ga0187788_10269642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	681	Open in IMG/M
3300018034\|Ga0187863_10705387	Not Available	570	Open in IMG/M
3300018062\|Ga0187784_10219044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1552	Open in IMG/M
3300018062\|Ga0187784_10487125	Not Available	994	Open in IMG/M
3300018085\|Ga0187772_10010306	All Organisms → cellular organisms → Bacteria → Proteobacteria	5051	Open in IMG/M
3300019270\|Ga0181512_1635942	Not Available	737	Open in IMG/M
3300019377\|Ga0190264_11815483	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300019786\|Ga0182025_1298546	Not Available	1861	Open in IMG/M
3300019887\|Ga0193729_1136286	Not Available	900	Open in IMG/M
3300020582\|Ga0210395_11201715	Not Available	557	Open in IMG/M
3300021180\|Ga0210396_11542306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300021403\|Ga0210397_11081685	Not Available	623	Open in IMG/M
3300021477\|Ga0210398_10955818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300021477\|Ga0210398_11554243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300025579\|Ga0207927_1011586	Not Available	2955	Open in IMG/M
3300025934\|Ga0207686_10958985	Not Available	692	Open in IMG/M
3300027559\|Ga0209222_1062098	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300027575\|Ga0209525_1158214	Not Available	515	Open in IMG/M
3300027625\|Ga0208044_1039939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1549	Open in IMG/M
3300027671\|Ga0209588_1113977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300027676\|Ga0209333_1206051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300027743\|Ga0209593_10024669	All Organisms → cellular organisms → Bacteria → Proteobacteria	2407	Open in IMG/M
3300027908\|Ga0209006_10760835	Not Available	788	Open in IMG/M
3300028565\|Ga0302145_10121242	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300028673\|Ga0257175_1029293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300028746\|Ga0302233_10331427	Not Available	576	Open in IMG/M
3300028776\|Ga0302303_10205570	Not Available	680	Open in IMG/M
3300028776\|Ga0302303_10250491	Not Available	604	Open in IMG/M
3300028779\|Ga0302266_10019740	All Organisms → cellular organisms → Bacteria → Proteobacteria	3552	Open in IMG/M
3300028795\|Ga0302227_10355955	Not Available	556	Open in IMG/M
3300028828\|Ga0307312_10495978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300028906\|Ga0308309_11076343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300029917\|Ga0311326_10178150	Not Available	1127	Open in IMG/M
3300029943\|Ga0311340_11444239	Not Available	541	Open in IMG/M
3300029999\|Ga0311339_10009694	All Organisms → cellular organisms → Bacteria → Proteobacteria	15241	Open in IMG/M
3300030020\|Ga0311344_11167350	Not Available	584	Open in IMG/M
3300030054\|Ga0302182_10296073	Not Available	683	Open in IMG/M
3300030058\|Ga0302179_10026523	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300030058\|Ga0302179_10385263	Not Available	617	Open in IMG/M
3300030225\|Ga0302196_10488529	Not Available	513	Open in IMG/M
3300030490\|Ga0302184_10035223	Not Available	2551	Open in IMG/M
3300030646\|Ga0302316_10021457	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300030906\|Ga0302314_10305643	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300031233\|Ga0302307_10309294	Not Available	808	Open in IMG/M
3300031233\|Ga0302307_10309939	Not Available	807	Open in IMG/M
3300031236\|Ga0302324_102504537	Not Available	630	Open in IMG/M
3300031524\|Ga0302320_11389201	Not Available	700	Open in IMG/M
3300031770\|Ga0318521_10879475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	547	Open in IMG/M
3300031788\|Ga0302319_11128628	Not Available	732	Open in IMG/M
3300032001\|Ga0306922_11536868	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	664	Open in IMG/M
3300032060\|Ga0318505_10489199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	581	Open in IMG/M
3300032076\|Ga0306924_10322765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1771	Open in IMG/M
3300032739\|Ga0315741_11787480	Not Available	544	Open in IMG/M
3300032756\|Ga0315742_10923019	Not Available	849	Open in IMG/M
3300033289\|Ga0310914_11007720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	733	Open in IMG/M
3300033822\|Ga0334828_094069	Not Available	746	Open in IMG/M
3300034065\|Ga0334827_033136	All Organisms → cellular organisms → Bacteria → Proteobacteria	2022	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.79%
Host-Associated	Host-Associated	7.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.27%
Aquatic	Environmental → Aquatic	22.52%
Plants	Host-Associated → Plants	7.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.65%
Peat	Environmental → Terrestrial → Peat	21.62%
Freshwater	Environmental → Aquatic → Freshwater	20.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.21%
Sediment	Environmental → Aquatic → Sediment	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.72%
Loam	Environmental → Terrestrial → Soil → Loam	19.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.41%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.21%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_125940631	3300000550	Soil	DLERLVADKSRRVTPLNTYVADHLLVTRFDARSDRIRQAGVERIIVWAIREMRGDKIAAIRCCLAERTDSETARFLEWERTHPPQP*
JGI12648J13191_10080663	3300001084	Forest Soil	DLERYVTDKSRRVTTLNTYVTGNILLTRFEARSDTIQKAGVERIILWGTREMRGDKIATTRCCLPERTDPQTARFLEWDYAHPLTK*
JGI12694J13545_10089531	3300001166	Forest Soil	DDAVIDSESGFCASGPCVGKAAIQKDLERYVTDKSRQVTTLNTYVTGDVLLTRFEARSATIQGAGVERIILWGIREMRGDKIASSRCCLPERTDAQTARFLEWDYAHPSIK*
JGI12635J15846_103896571	3300001593	Forest Soil	AAIQKDLERYVADKTRRVTPLNTYVSGDVMVTRFEARSATIQKAGVERIILWGIREMRGGKIASYRCCMPERTDPQTARFLDWDYAHPSTR*
JGIcombinedJ26739_1006608581	3300002245	Forest Soil	KDLERLVQDKTRRVTSLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERTDAQTARFIEWEEAHPATGE*
JGIcombinedJ26739_1011973832	3300002245	Forest Soil	AAAVALFTDDAVVDAPSGLCTKAPCVGKAAIQKDLERLVADKSRRVTTLNTYVSGNVLVTRFEARSATIQTAGVDRIILWAIREMQGDKIASVRCCMPERTDSQTAHFLEWEQAQ*
JGIcombinedJ26739_1014115301	3300002245	Forest Soil	LFTDDAVIDSQSGQCTDAPCVGKAAIRKDLERLVTDKSRRVTALNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKITALRCCLPERTDAQTARFIEWEEAHPSTGQ*
Ga0058900_14319061	3300004099	Forest Soil	CASAPCVGKAAIQQDLERYVSDKSRHVTTLNTYVTGNVLLTRFEARSATIQKSGVERIILWGIHEMRGDKIASSRCCLPERTDTQTARFLAWDYAHPAVK*
Ga0058885_11926272	3300004116	Forest Soil	IQQDLERYVSDKSRHVTTLNTYVTGNVLLTRFEARSATIQKSGVERIILWGIHEMRGDKIASSRCCLPERTDTQTARFLAWDYAHPAVK*
Ga0058886_13532571	3300004118	Forest Soil	IDSESGFCASAPCVGKAAIQKDLERYVADKSRHVTTLNTYVTGNVLLTRFEARSATIQNAGVERIILWGIHEMRGDKIASSRCCLPERTDAQTARFLAWDYAHPAVK*
Ga0058897_103831112	3300004139	Forest Soil	CVGKAAIQQDLERYVSDKSRHVTTLNTYVTGNVLLTRFEARSATIQKSGVERIILWGIHEMRGDKIASSRCCLPERTDTQTARFLAWDYAHPAVK*
Ga0066704_100597711	3300005557	Soil	GTCTDKPCVGKAAIRKDLERLVADKTRRVTPLGTYVAGNVLVTRFEARSATIQNAGLDRIVLWGIREMRDGKIAALRCCLPERTDSQTARFLEWEEQHPSAGQ*
Ga0070764_106180903	3300005712	Soil	IQKDLERYVADKSRHVTTLNTYVTGNVLLTRFEARSDTIQKAGVERIILWGIREMHGDKIASSRCCLPERTDPQTARFLAWDYAHPTIK*
Ga0070764_110038221	3300005712	Soil	IQKDLERFAADKSRHVTVLGTYVSGDVLVTRFEARSALIQKAGVDRVILWGIRQMRGDKIASYRCCMPERTDSQTLRFLEWDYAHPSVK*
Ga0075417_106358412	3300006049	Populus Rhizosphere	CTDAPCVGKAAIRKDLERLVMDKSRRVTSLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERTDAQTARFIEWEEAHPATGE*
Ga0075015_1003055263	3300006102	Watersheds	ESGGCTSAPCVGKAAIGADLERIAADKSRRITLLSTYVAGSVLVTRFEASSATIQKAGVDRIILWGIREMEGAKIASIRCCLPERTDPQTARFLEWDYEHPSTP*
Ga0075030_1004383391	3300006162	Watersheds	ALALFTDDAVIDAQSGLCAAAPCVGKTAIRKDLERIVADKRRRVTPINTYVSGNFMVTRFEARSSITEKAGVDRIILWGIREIRGDKIAASRCCLPERTDPQTAHFLQWDYAHPQTE*
Ga0070765_1000721341	3300006176	Soil	GKAAIQKDLERYVADKSRHVTTLNTYVTGNVLLTRFEARSATIQKAGVERIILWGIHEMRGDKIASSRCCLPERTDAQTARFLAWDYAHPAVK*
Ga0070765_1006018763	3300006176	Soil	DKSRRVTTLNTYVTGTVLLTRFEARSAAIQKAGFERIILWEIREFRGEKIASTRCCMPERTDSQTLHFLEWDYAHPSLK*
Ga0075520_13571721	3300006795	Arctic Peat Soil	AGQFYAAVKSWVIKLQSQSFQRYALFTEDAVIDSESGFCAKAPCVGKAAIQKDFERYVADKSRHVTPLNTYVSGSVLVTRFEARSAAIQKAGVDRIILWSIREMRGDKIASSRCCLPERTDSQTARFLEWDYAHPTQ*
Ga0075425_1010263532	3300006854	Populus Rhizosphere	ADKTRRITLLNTYAAGNLLVTRFEARSATIQSAGVDRIVLWSIREMRGGKIAAIRCCLPERTDSQTARFVEWEEQHPAAGQ*
Ga0075435_1001548282	3300007076	Populus Rhizosphere	ADKTRRITLLNTYAAGNLPVTRFEARSATIQSAGVDRIVLWSIREMRGAKIAAIRCCLPERTDSQTARFVEWEEQHPAAGQ*
Ga0066793_104113481	3300009029	Prmafrost Soil	SGLCWKTPCVGKAAIQKDLERYVADKSRRITPLNTYVSGNVLVTRFEARSATIQKTGVDRIILWGIREMRGDKIASTRCCLPDRTDPQTARFLEWDYAHPSTK*
Ga0105092_105852371	3300009157	Freshwater Sediment	QDLERLVADKSRRVTPLSTHVAGPLVVTRFDARSDTIRTAGVERIIVWAIREMRGDKIASIRCCLAERTDPQTARFLEWERTHPPRP*
Ga0075423_103285862	3300009162	Populus Rhizosphere	VIDAQSGSCTDKPCVGKDAIRKDLERLAADKTRRITLLNTYAAGNVLVTRFEARSATIQSAGLDRIVLWSIREMRGGKIAALRCCLPERTDSQTARFVEWEEQHPAAGQ*
Ga0105242_106842972	3300009176	Miscanthus Rhizosphere	KAAIRKDLERLVQDKTRRVTSLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERTDAQTARFIEWEEAHPATGE*
Ga0116221_14646331	3300009523	Peatlands Soil	AIRKDFERYVADKSRRATPLNTYVSGNVLITRFEARSATIQQAGVDRIILWAIREFRGDKIAVTRCCLPERTDSQTLRFLEWDYAHPAGE*
Ga0116102_10906991	3300009632	Peatland	TESGFCAKAPCVGKAAIQKDFERYVADKSRHVTPLNTYVSGNVLVTRFEARSATIKQAGVERVILWSIREMRGDKIATTRCCLPERSDPQTARFLEWDYAHPAQ*
Ga0116110_10506441	3300009643	Peatland	AIQKDLERFVNDKSRHVTPLNTYVSGNVLVTRFEARSAMIQKSGGDRIILWGIREMRGDKIASVRCCMPERTDPQTARFLQWDYAHPSVK*
Ga0150983_131498611	3300011120	Forest Soil	AFFTEDAVIDTESGLCASVPCVGKAAIQKDLERYVADKSRRVTSLGTYVSGSVVVVHFEARSAQIEKAGVERIILWGIREMKGDKIASSRCCLPDRTDPQTARFIEWDYAHPSGK*
Ga0150983_140081361	3300011120	Forest Soil	SGFCASAPCVGKAAIQKDLERYVADKSRHVTTLNTYVTGNVLLTRFEARSATIQNAGVERIILWGIHEMRGDKIASSRCCLPERTDAQTARFLAWDYAHPAVK*
Ga0137396_101283063	3300012918	Vadose Zone Soil	GKAAIRKDLERLVTDKSRRVTPLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIRKMRDGKIAALRCCLPERTDAQTARFIEWEEAHPSTGE*
Ga0157378_130764861	3300013297	Miscanthus Rhizosphere	DDAVIDSQSGACTDKPCVGKDAIRKDLERLVQDKTRRVTSLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERTDAQTARFIEWEEAHPATGE*
Ga0181518_100562521	3300014156	Bog	PCVGKAAIQKDLERYVADKSRRSTPLNTYVSGNVLVTRFEARSATIQKAGVDRIILWGIREMRGDKIASVRCCMPERTDSQTARFLEWEYAHPSTK*
Ga0181521_101485451	3300014158	Bog	PCVGKAAIQKDLERYVANKSRRSTPLNTYVSGNVLVTRFEARSATIQKAGVDRIILWGIREMRGDKIASVRCCMPERTDSQTARFLEWEYAHPSTK*
Ga0181530_101216614	3300014159	Bog	PCVGKAAIQKDLERFVNDKSRHVTPLNTYVSGNVLVTRFEARSAMIQKSGADRIILWGIREMRGDKIASYRCCMPERTDPQTARFLEWDYAHPSVK*
Ga0181530_105191661	3300014159	Bog	IQKDLERLVSDKSRRITPLNTYVSGNVLVTRFEARSAAINKAGVDRIILWSIREMRGDKIASTRCCLPERTDSQTARFLVWDYAHPSTE*
Ga0181528_103444342	3300014167	Bog	CAKAPCTGKAAIQKDFERYVADKSRHVTPLNTYLSGDILVTRFEARSANIKKAGTERIILWGIREFRGDKIAVSRCCLPDRTDAQTARFLEWDHAHPNQ*
Ga0181526_105231131	3300014200	Bog	DVGEALALFTEDAVIDAQSGYCAKVPCVGKAAIRKDFERYVVDKSRRATPLNTYVSGNVLVTRFEARSATIRQAGVDRIILWGIREFRGDKIAVTRCCLPERTDSQTLRFLEWDYAHPAGE*
Ga0157380_125462842	3300014326	Switchgrass Rhizosphere	SQSGACTDKPCVGKDAIRKDLERLATDKTRRVTLLNTYAAGNVLVTRFDARSATIQNAGLDRIVLWSIREMRDGKIAALRCCLPERTDSQTARFIEWEEQHPAAGQ*
Ga0182018_100169603	3300014489	Palsa	VPAALSLFTDDAVIDAESGLCARAPCVGKAAIQKDLERYVADKTRRVTPLNTYVSGDVMVTRFEARSATIQKAGVERIILWGIRQMRGDKIASYRCCMPERTDPQTARFLDWDYAHPSTR
Ga0182015_100661756	3300014495	Palsa	RYVADKSRRVTVLNTFVSGSVLVTRFEARSATIQKAGVERIILWEIRETRGDKIASTRCCMPERTDAQTIRFLEWDYAHPSNL*
Ga0181525_107204521	3300014654	Bog	SLFTDDAVIDSESGLCAKSPCVGKAAIQKDFERYVADKSRHVTPLNTYVSGDVLVTRFEARSANIQKAGTERIILWGVREFRGDKIAVSRCCLPDRTDAQTARFLEWDHAHPNQ*
Ga0181522_110509672	3300014657	Bog	TDKTRRVTPLNTFVSGNVLVTRFEARSATIQKAGVDRVILWGIREMRDGKIASSRCCLPDRTDTQTARFIDWEYAHPSAH*
Ga0181519_103051741	3300014658	Bog	SESGLCAKSPCVGKAAIQKDFERYVADKSRHVTPLNTYVSGDVLVTRFEARSANIQKAGTERIILWGVREFRGDKIAVSRCCLPDRTDAQTARFLEWDHAHPNQ*
Ga0181519_109910821	3300014658	Bog	LFTEDAVIDSESGFCAKTPCVGRPAIQKDFERYVADKSRHVALLNTYVSGDVLVTRFEARSANIQKSGAERIILWGIREFRGDKIASSRCCLPDRTDAQTARFLEWDYAHPLTQ*
Ga0181515_14187002	3300016730	Peatland	AVIDTESGYCAKSPCVGKAAIQKDFERYVKDSTRRVTPLNTFVAGDVLVTRFEARSATIQKAGVERIILWGIKEIRGDKIASSRCCLPDRTDSQTARFLEWDYAHPSTP
Ga0181505_110386991	3300016750	Peatland	EALALFTEDAVIDAQSGYCAKVPCVGKAAIRKDFERYVVDKSRRATPLNTYVTGNVLVTRFEARSATIQQAGVDRIILWGIREFRGDKIAVTRCCLPERTDSQTLRFLEWDYAHPAGE
Ga0187801_102423481	3300017933	Freshwater Sediment	VIDARSGYCGKAPCVGKAAIQKDLERYVMDKSRRVTPLNTYVSGNVLLTRFEARSATIQQAGVDRIILWGIREFRGDKIAVTRCCLPERTDPQTARFLEWDYAHPTGE
Ga0187853_102342253	3300017940	Peatland	GYCAKSPCVGKAAIQKDFERYVKDSTRRVTPLNTFVAGDVLVTRFEARSATIQKAGVERIILWGIKEIRGDKIASSRCCLPDRTDSQTARFLEWDYAHPSTP
Ga0187879_100230721	3300017946	Peatland	ERYVADKGRRVTPLNTYAAGNVTVTRFEARSSTIQKAGVERIILWGIREMRGDKIASSRCCLPDRTDPQTARFLAWDYGHPTNQ
Ga0187779_102212861	3300017959	Tropical Peatland	AIQKDLERLVVDKSRRVTTLNTYVSGNVLLTRFEARSATIQGAGVDRIILWGMREMRGGKIAVLRCCMPERTDSQTARFIQWEEASRPAPDKR
Ga0187870_12110601	3300017998	Peatland	AIQKDFERYVKDSTRRVTPLNTFVAGDVLVTRFEARSATIQKAGVERIILWGIKEIRGDKIASSRCCLPDRTDSQTARFLEWDYAHPSTP
Ga0187884_104402481	3300018009	Peatland	VGKAAIQKDFERYVKDSTRRVTPLNTFVAGDVLVTRFEARSATIQKAGVERIILWGIKEIRGDKIASSRCCLPDRTDSQTARFLEWDYAHPSTP
Ga0187788_102696422	3300018032	Tropical Peatland	DAVIDAQSGYCTDKPCVGNDAIRKDLERLAADKSRRITPLNTYAAGNVLVTRFEARSATIQSAGFDRIVLWSIREMRGGKIAALRCCLPERTDSETARFVEWEEQHPAAGQ
Ga0187863_107053872	3300018034	Peatland	TESGYCAKSPCVGKAAIQKDFERYVKDATRRVTPLNTFVSGNVLVTRFEARSATIKSAGVDRVILWGIREIRDGKIASSRCCLPDRTDTQTARFLEWDYAHPTPQ
Ga0187784_102190441	3300018062	Tropical Peatland	QAALALFTDDAVIDAESGACATAPCVGKAAIQKDFERYVVDKSRRVTLLNTFVAGNVLVTRFEARSSTVQKAGVDRVVLWGIREMRGDKIAVLRCCMPERTDPQTARFLEWEYANSGPAR
Ga0187784_104871251	3300018062	Tropical Peatland	ERYVVDKTRRVTLLNTYVAGNVVVTRFEARSSTVQKAGVDRVVLWGIREMRGDKIAVLRCCMPERTDPPTARFLEWEYANSGPAK
Ga0187772_100103061	3300018085	Tropical Peatland	RYVGDKTRRVTLLNTYVAGNVLVTRFEARSSTVQKAGVDRVVLWGIREMRGDKIAVLRCCMPERTDPQTARFLEWEYANSGPAR
Ga0181512_16359423	3300019270	Peatland	CVGKAAIQKDLDRYVADKSRRVTVLDTHVDGNVLVTRFEARSALIQSSGVDRIVLWGIREMRGDKIATSRCCLPERTDSQTARFLAWDYAHPLAQK
Ga0190264_118154831	3300019377	Soil	EAIRQDLERLVADKSRRVTPLSTHVAGPLVVTRFDARSDTIRTAGVERIIVWAIREMRGDKIASIRCCLAERTDPQTARFLEWERTHPPRP
Ga0182025_12985462	3300019786	Permafrost	LREGTCVGKAAIQKDLERFVADKSRRVTPINTYASGNVLVTRFEAAVPLSRKLESNASSSGNSRDARGKIASTRCCLPERTDPQTARFLEWDYAHPST
Ga0193729_11362861	3300019887	Soil	VTDKSRRVTSLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKIAVLRCCLPERTDAQTARFIEWEEAHPATGE
Ga0210395_112017151	3300020582	Soil	KAAIQKDLERYVTDKSRRVTTLNTYVTGNILLTRFEARSDTIQKAGVERIILWGTREMRGDKIASTRCCLPERTDPQTARFLEWDYAHPLTK
Ga0210396_115423062	3300021180	Soil	LFTDDAVIDSESGFCASAPCVGKAAIQKDLERFVADKSRRVTTLNTYVTGNVLLTRFEARSAAIQKAGVERIILWGIREMHGDKIASSRCCLPERTDPQTARFLAWDYAHPTIK
Ga0210397_110816851	3300021403	Soil	QQDLERYVSDKSRHVTTLNTYVTGNVLLTRFEARSATIQKSGVERIILWGIHEMRGDKIASSRCCLPERTDTQTARFLAWDYAHPAVK
Ga0210398_109558182	3300021477	Soil	FCASAPCVGKAAIQKDLERFVADKSRRVTTLNTYVTGNVLLTRFEARSATIQKAGVERIILWGIREMHGDKIASSRCCLPERTDPQTARFLAWDYAHPTIK
Ga0210398_115542431	3300021477	Soil	AVIDTESGLCASVPCVGKAAIQKDLERYVADKSRRVTSLGTYVSGNVVVMHFEARSAQIEKAGVDRIILWGIREMKGDKIASSRCCLPDRTDSQTARFLQWDYAHPSTK
Ga0207927_10115861	3300025579	Arctic Peat Soil	AESGLCARAPCVGKAAIQKDLERYVADKSRRITPLNTYVSGNVLVTRFEARSATIQKTGVDRIILWGIREMRGDKIASTRCCLPDRTDPQTARFLEWDYAHPSTK
Ga0207686_109589851	3300025934	Miscanthus Rhizosphere	KAAIRKDLERLVQDKTRRVTSLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERTDAQTARFIEWEEAHPATGE
Ga0209222_10620981	3300027559	Forest Soil	SGLCAASPCVGKAAIRKDFERYVADKSRRVTPLSTYVSGNVLVTRFEARSDTIQKAGVDRIILWGIREMRGDKIASSRCCMPERTDPQTARFLAWDYAHPSTK
Ga0209525_11582141	3300027575	Forest Soil	ESGLCSRAPCVGKVAIQKDFERYVADKSRRVTSLGTYVSGNVLVTRFEARSALIEKAGVHRIILWGIREMKGDKIASSRCCLPDRTDSQTARFLEWDYAHPSK
Ga0208044_10399392	3300027625	Peatlands Soil	FTEDAVIDSESGLCAKAPCVGKAAVQKDLERFVNDKSRHVTPLNTYVSGNVLVTRFEARSAMIQKSGADRIILWGIREMRGDKIASVRCCMPERTDPQTARFLEWDYAHPSVK
Ga0209588_11139772	3300027671	Vadose Zone Soil	AAIRKDLERLVVDKSRRVTPLNTYVAGNVLVVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERSDAQTARFLEWEEAHPSTGE
Ga0209333_12060512	3300027676	Forest Soil	SGFCASAPCVGKAAIQKDLERYVTDKSRRVTTLNTYVTGNILLTRFEARSDTIQKAGVERIILWGIREMHGDKIASSRCCLPERTDPQTARFLAWDYAHPTIK
Ga0209593_100246697	3300027743	Freshwater Sediment	LALFVDDAVIDAPSGPCLPAPCVGKEAIRQDLERLVADKSRRVTPLSTHVAGPLVVTRFDARSDTIRTAGVERIIVWAIREMRGDKIASIRCCLAERTDPQTARFLEWERTHPPRP
Ga0209006_107608351	3300027908	Forest Soil	LALFTDDSVIDAESGLCAKAPGVGKAAIRKDLERFVADKSRRVTPINSYASGNVLVTRFEARSATIQKAGVERIILWGIREMRGGKIASTRCCLPERTDPQTARFLEWDYGHPSTQ
Ga0302145_101212422	3300028565	Bog	QAPCVGKTAIRKDFERYVKDTSRRVTALSTYVSGNVLVTRFEARSATIQKAGVDRIILWGIREMRGDLIASSRCCLPDRTDAQTARFLEWDYAHPGH
Ga0257175_10292932	3300028673	Soil	ALFTDDAVIDSQSGLCTDAPCVGKAAIRKDLERLVVDKSRRVTPLNTYVAGNVLVVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERSDAQTARFLEWEEAHPSTGE
Ga0302233_103314271	3300028746	Palsa	CAKAPCVGKAAIQKDLERYVADKSRRVTPINTYATGNVLVTRFEARSATIQKAGVERIILWGIREMRGGKIASTRCCLPERTDPQTARFLEWDYGHPSGQ
Ga0302303_102055701	3300028776	Palsa	SESGHCTKAPCVGRAAIQKDLERYVADKSRRVTVLNTYVSGNVLVTRFEARSATIQKAGVERIILWEIRETRGDKIASTRCCMPERTDAQTIRFLEWDYAHPSNL
Ga0302303_102504911	3300028776	Palsa	AIQKDLERYVADKSRRVTPINTYATGNVLVTRFEARSATIQKAGVERIILWGIREMRGGKIASTRCCLPERTDPQTARFLEWDYGHPSGQ
Ga0302266_100197406	3300028779	Bog	DVQAALSLFTDDAVIDSESGLCAKTPCTGKAAIQKDFERYVADKSRHVTPLNTYLSGDILVTRFEARSANIKKAGTERIILWGIREFRGDKIAVSRCCLPDRTDAQTARFLEWDHAHPNQ
Ga0302227_103559551	3300028795	Palsa	SGLCAKAPCVGKAAIQKDLERYVADKSRRVTPINTYATGNVLVTRFEARSATIQKAGVERIILWGIREMRGGKIASTRCCLPERTDPQTARFLEWDYAHPAAQ
Ga0307312_104959782	3300028828	Soil	ALFTDDTVIDSQSGLCTDAPCVGKAAIRKDLERLVQDKTRRVTSLNTYVAGNVLVTRFEARSATIQGAGVERVILWGIREMRDGKIAALRCCLPERTDAQTARFIEWEEAHPSTGE
Ga0308309_110763431	3300028906	Soil	SGFCASAPCVGKAAIQKDLERYVADKSRHVTTLNTYVTGNVLLTRFEARSATIQKAGVERIILWGIHEMRGDKIASSRCCLPERTDAQTARFLAWDYAHPAVK
Ga0311326_101781501	3300029917	Bog	RKDFERYVKDTSRRVTALSTYVSGNVLVTRFEARSATIQKAGVDRIILWGIREMRGDLIASSRCCLPDRTDAQTARFLEWDYAHPGH
Ga0311340_114442392	3300029943	Palsa	DFERYVADKSRRVTSLGTFVAGNVVVTHFEARSATIQKAGVDRIILWGIREMKGDKIASSRCCLPDRTDSQTARFLEWDYAHPSVK
Ga0311339_1000969412	3300029999	Palsa	AAIQKDLERYVADKSRRVTPINTYATGNVLVTRFEARSATIQKAGVERIILWGIREMRGGKIASTRCCLPERTDPQTARFLEWDYGHPSGQ
Ga0311344_111673501	3300030020	Bog	ESGLCAKAPCVGKAAIQNDLERFVADKTRRVTVLNTYVSGNVLVTRFEARSATIQKAGFERVILWGIREMRGDKIASYRCCMPERTDSQTAHFLEWDYAHPSVN
Ga0302182_102960731	3300030054	Palsa	DAESGLCAKAPCVGKAAIQKDLERYVADKSRRVTPINTYATGNVLVTRFEARSATIQKAGVERIILWGIREMRGGKIASTRCCLPERTDPQTARFLEWDYGHPSGQ
Ga0302179_100265231	3300030058	Palsa	HCAKAPCVGKPAIQKDLERYVVDKTRRVTLLNTYVTGNVLVTRFEARSATIQQAGVERIILWEIRETRGDQIASTRCCMPERTDAQTMRFLEWDYAHPSKL
Ga0302179_103852631	3300030058	Palsa	LERYVADKSRRVTPINTYATGNVLVTRFEARSATIQKAGVERIILWGIREMRGGKIASTRCCLPERTDPQTARFLEWDYGHPSGQ
Ga0302196_104885292	3300030225	Bog	DSESGLCAKTPCTGKAAIQKDFERYVADKSRHVTPLNTYLSGDILVTRFEARSANIKKAGTERIILWGIREFRGDKIAVSRCCLPDRTDAQTARFLEWDHAHPNQ
Ga0302184_100352231	3300030490	Palsa	AVIDAESGFCAKAPCVGKTAIQKDLERFVADKSRRVSVLNTYGSGNVLVTRFEARSDTIKKAGVERIILWGIREMRGDKIASYRCCMPERTDSQTAQFLEWDYSHPSTK
Ga0302316_100214571	3300030646	Palsa	IQKDLERFVADKSRRVSVLNTYGSGNVLVTRFEARSDTIKKAGVERIILWGIREMRGDKIASYRCCMPERTDSQTAQFLEWDYSHPSTK
Ga0302314_103056431	3300030906	Palsa	VGKPAIQKDLERYVVDKTRRVTLLNTYVTGNVLVTRFEARSATIQQAGVERIILWEIRETRGDQIASTRCCMPERTDAQTMRFLEWDYAHPSKL
Ga0302307_103092942	3300031233	Palsa	AALDLYTEDAVIDSESGHCTKAPCVGRAAIQKDLERYVADKSRRVTVLNTYVSGNVLVTRFEARSATIQKAGVERIILWEIRETRGDKIASTRCCMPERTDAQTIRFLEWDYAHPSNL
Ga0302307_103099391	3300031233	Palsa	AKAPCIGKAAIQKDLERYVADKSRRVTPINTYVSGNVLVTRFEARSATIQKAGVERIILWGIREIRAGKIASTRCCLPERTDPQTARFLEWDYAHPATQ
Ga0302324_1025045371	3300031236	Palsa	VALFTDDAVIDTESGLCAKAPCVGKAAIQKDFERYVKDKSRRVTVLKTYLSGDVLVTRFEARSSTIQKAGAERIILWGIREFRGDKIASSRCCFPERTDSQTARFLEWDYAHPNQ
Ga0302320_113892013	3300031524	Bog	KDTSRRVTPLSTHVSGDLLVTRFEARSATITKAGVERIILWSIREIRDGKFASSRCCLPERTDAQTARFLTWDYAHPAH
Ga0318521_108794751	3300031770	Soil	AQSGLCADKPCVGKEAIRKDLERLAADKTRRITVLNTYAAGNVLVTRFEARSGTIQSAGLDRIVLWSIREMRDGKIASIRCCLPERTDSQTARFVQWEEQHPAAGN
Ga0302319_111286281	3300031788	Bog	DFERYVADKSRRAIPLNTYISGDVLVTRFEAHSATIQKAGSERIILWGIREFRGGKIASSRCCMPDRTDPQTARFLEWEYAHPTQ
Ga0306922_115368682	3300032001	Soil	LERLAADKTRRITVLNTYAAGNVLVTRFEARSGTIQSAGLDRIVLWSIREMRDGKIASIRCCLPERTDSQTARFVQWEEQHPAAGN
Ga0318505_104891992	3300032060	Soil	FTDDAMIDAQSGLCADKPCVGKEAIRKDLERLAADKTRRITVLNTYAAGNVLVTRFEARSGTIQSAGLDRIVLWSIREMRDGKIASIRCCLPERTDSQTARFVQWEEQHPAAGN
Ga0306924_103227651	3300032076	Soil	DKPCVGKEAIRKDLERLAADKTRRITVLNTYAAGNVLVTRFEARSGTIQSAGLDRIVLWSIREMRDGKIASIRCCLPERTDSQTARFVQWEEQHPAAGN
Ga0315741_117874801	3300032739	Forest Soil	ADKTRRVTPLNTYVSGDVMVTRFEARSATIQKAGVERIILWGVREMRGDKIASIRCCLPERTDAQTARFLEWDYAHPSIQ
Ga0315742_109230191	3300032756	Forest Soil	FTDDAVIDTESGLCASVPCVGRAAIQKDLERYVADKSRRVTSLGTYVSGNVVVMHFEARSAQIEKAGVDRIILWGIREMKGDKIASSRCCLPDRTDSQTARFIEWDYAHPSAK
Ga0310914_110077202	3300033289	Soil	DLERLAADKTRRITVLNTYAAGNVLVTRFEARSGTIQSAGLDRIVLWSIREMRDGKIASIRCCLPERTDSQTARFVQWEEQHPAAGN
Ga0334828_094069_19_381	3300033822	Soil	VTAALALFTDDAVIDSESGHCAKAPCVGKAAIQKDLERYVLDKSRRVTTLNTYISGNVLVTRFEARSDTIRKAGVDRIVLWGIREMRGDKISSTRCCMPERTDAQTVRFLEWDYAHPSTP
Ga0334827_033136_2_340	3300034065	Soil	FTDDAVIDSESGLCAKTPCTGKAAIQKDFERYVADKSRHVTPLNTYLSGDILVTRFEARSANIKKAGTERIILWGIREFRGDKIAVSRCCLPDRTDAQTARFLEWDHAHPNQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085957

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences