Metagenome / Metatranscriptome Family F085951

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085951
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	57 residues
Representative Sequence	LACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE
Number of Associated Samples	97
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.59 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland (10.811 % of family members)
Environment Ontology (ENVO)	Unclassified (30.631 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.53% β-sheet: 0.00% Coil/Unstructured: 60.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00012	HSP70	15.32
PF07690	MFS_1	6.31
PF00578	AhpC-TSA	4.50
PF00903	Glyoxalase	2.70
PF07883	Cupin_2	1.80
PF01148	CTP_transf_1	1.80
PF09720	Unstab_antitox	1.80
PF13742	tRNA_anti_2	1.80
PF05016	ParE_toxin	1.80
PF13817	DDE_Tnp_IS66_C	0.90
PF01380	SIS	0.90
PF01663	Phosphodiest	0.90
PF00069	Pkinase	0.90
PF00227	Proteasome	0.90
PF12681	Glyoxalase_2	0.90
PF01367	5_3_exonuc	0.90
PF08592	Anthrone_oxy	0.90
PF13229	Beta_helix	0.90
PF01261	AP_endonuc_2	0.90
PF02934	GatB_N	0.90
PF13414	TPR_11	0.90
PF09413	DUF2007	0.90
PF00749	tRNA-synt_1c	0.90
PF01850	PIN	0.90
PF04223	CitF	0.90
PF07602	DUF1565	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	15.32
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0064	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	Translation, ribosomal structure and biogenesis [J]	0.90
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.90
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	0.90
COG3051	Citrate lyase, alpha subunit	Energy production and conversion [C]	0.90
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.39 %
Unclassified	root	N/A	12.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.39 %
Unclassified	root	N/A	12.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.39 %
Unclassified	root	N/A	12.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.66 %
Unclassified	root	N/A	12.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.61 %
Unclassified	root	N/A	12.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	12.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.61 %
Unclassified	root	N/A	12.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.50 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	12.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.61 %
Unclassified	root	N/A	12.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.50 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	12.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.61 %
Unclassified	root	N/A	12.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.80 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.90 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.90 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	12.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.61 %
Unclassified	root	N/A	12.61 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	1.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.90 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.90 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	12.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.61 %
Unclassified	root	N/A	12.61 %
Acidobacterium capsulatum ATCC 51196	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum → Acidobacterium capsulatum ATCC 51196	1.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.90 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.90 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10038184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2716	Open in IMG/M
3300001166\|JGI12694J13545_1022031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	590	Open in IMG/M
3300003267\|soilL1_10153870	Not Available	1704	Open in IMG/M
3300004092\|Ga0062389_100537422	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300004152\|Ga0062386_100501681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	985	Open in IMG/M
3300005541\|Ga0070733_10395009	All Organisms → cellular organisms → Bacteria → Acidobacteria	920	Open in IMG/M
3300005842\|Ga0068858_101843931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	597	Open in IMG/M
3300005921\|Ga0070766_10251354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1122	Open in IMG/M
3300005952\|Ga0080026_10007233	Not Available	2589	Open in IMG/M
3300006176\|Ga0070765_100191440	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300006176\|Ga0070765_101295835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	687	Open in IMG/M
3300006237\|Ga0097621_100200635	Not Available	1732	Open in IMG/M
3300009518\|Ga0116128_1173894	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300009525\|Ga0116220_10277419	Not Available	735	Open in IMG/M
3300009547\|Ga0116136_1094262	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300009547\|Ga0116136_1114018	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300009552\|Ga0116138_1127232	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300009623\|Ga0116133_1147982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300009623\|Ga0116133_1163930	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300009632\|Ga0116102_1117163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300009683\|Ga0116224_10091303	All Organisms → cellular organisms → Bacteria → Acidobacteria	1478	Open in IMG/M
3300009760\|Ga0116131_1064551	All Organisms → cellular organisms → Bacteria → Acidobacteria	1149	Open in IMG/M
3300010399\|Ga0134127_10648191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300010866\|Ga0126344_1151121	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300011120\|Ga0150983_13008810	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300012930\|Ga0137407_10617539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1018	Open in IMG/M
3300013296\|Ga0157374_12178193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	581	Open in IMG/M
3300013308\|Ga0157375_10068110	All Organisms → cellular organisms → Bacteria	3560	Open in IMG/M
3300014162\|Ga0181538_10231793	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300014169\|Ga0181531_10642286	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300014489\|Ga0182018_10300320	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300014654\|Ga0181525_10557991	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300015053\|Ga0137405_1117336	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300015242\|Ga0137412_10053309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3297	Open in IMG/M
3300016341\|Ga0182035_11418956	Not Available	623	Open in IMG/M
3300017948\|Ga0187847_10223518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1026	Open in IMG/M
3300017975\|Ga0187782_10202836	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300017999\|Ga0187767_10209833	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018002\|Ga0187868_1007216	All Organisms → cellular organisms → Bacteria	6155	Open in IMG/M
3300018003\|Ga0187876_1013113	All Organisms → cellular organisms → Bacteria	4232	Open in IMG/M
3300018038\|Ga0187855_10766671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	562	Open in IMG/M
3300018058\|Ga0187766_11035352	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300018090\|Ga0187770_10856307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	729	Open in IMG/M
3300019268\|Ga0181514_1189002	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300019284\|Ga0187797_1294090	Not Available	829	Open in IMG/M
3300019786\|Ga0182025_1038297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	506	Open in IMG/M
3300020021\|Ga0193726_1009377	All Organisms → cellular organisms → Bacteria → Acidobacteria	5358	Open in IMG/M
3300020021\|Ga0193726_1019200	All Organisms → cellular organisms → Bacteria	3498	Open in IMG/M
3300020021\|Ga0193726_1033144	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300020021\|Ga0193726_1326093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	579	Open in IMG/M
3300020581\|Ga0210399_10158812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1871	Open in IMG/M
3300020581\|Ga0210399_10880502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300020583\|Ga0210401_11645559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300021170\|Ga0210400_11462933	Not Available	543	Open in IMG/M
3300021477\|Ga0210398_11232625	Not Available	590	Open in IMG/M
3300022530\|Ga0242658_1101893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	689	Open in IMG/M
3300022557\|Ga0212123_10402097	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300022731\|Ga0224563_1023501	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300022733\|Ga0224562_1001313	Not Available	1726	Open in IMG/M
3300025444\|Ga0208189_1051607	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300025448\|Ga0208037_1008691	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300025500\|Ga0208686_1076206	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300025506\|Ga0208937_1004101	All Organisms → cellular organisms → Bacteria	4257	Open in IMG/M
3300026035\|Ga0207703_10811736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300026088\|Ga0207641_10297062	Not Available	1524	Open in IMG/M
3300026217\|Ga0209871_1007818	All Organisms → cellular organisms → Bacteria → Acidobacteria	2019	Open in IMG/M
3300026551\|Ga0209648_10237821	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300027591\|Ga0209733_1097010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300027619\|Ga0209330_1042941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum → Acidobacterium capsulatum ATCC 51196	1031	Open in IMG/M
3300027648\|Ga0209420_1071166	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300027648\|Ga0209420_1207760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	517	Open in IMG/M
3300027696\|Ga0208696_1194590	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300027889\|Ga0209380_10057547	All Organisms → cellular organisms → Bacteria	2209	Open in IMG/M
3300027889\|Ga0209380_10830596	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300027905\|Ga0209415_10320613	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300028381\|Ga0268264_10326632	Not Available	1452	Open in IMG/M
3300028780\|Ga0302225_10341391	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300028798\|Ga0302222_10093071	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300028806\|Ga0302221_10189137	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300029889\|Ga0246001_1064610	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300029918\|Ga0302143_1121249	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300029943\|Ga0311340_10533534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300029984\|Ga0311332_10757525	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300030011\|Ga0302270_10295951	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300030013\|Ga0302178_10314874	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300030014\|Ga0302175_10005506	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300030020\|Ga0311344_10463263	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300030045\|Ga0302282_1371947	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300030049\|Ga0302191_10327385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	561	Open in IMG/M
3300030399\|Ga0311353_11591751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	527	Open in IMG/M
3300030688\|Ga0311345_10695585	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300030740\|Ga0265460_12030460	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031057\|Ga0170834_107306562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	574	Open in IMG/M
3300031128\|Ga0170823_17527820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	569	Open in IMG/M
3300031234\|Ga0302325_12357937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300031247\|Ga0265340_10068320	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300031474\|Ga0170818_100673354	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300031718\|Ga0307474_10187208	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300031718\|Ga0307474_10877556	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300031718\|Ga0307474_11242985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300031718\|Ga0307474_11660191	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300031754\|Ga0307475_10582970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300031962\|Ga0307479_10090052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2974	Open in IMG/M
3300031962\|Ga0307479_11345332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300032001\|Ga0306922_10711837	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300032180\|Ga0307471_102668173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300032783\|Ga0335079_10861935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum → Acidobacterium capsulatum ATCC 51196	933	Open in IMG/M
3300033977\|Ga0314861_0524018	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.79%
Host-Associated	Host-Associated	7.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.07%
Aquatic	Environmental → Aquatic	20.72%
Plants	Host-Associated → Plants	7.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.66%
Freshwater	Environmental → Aquatic → Freshwater	19.82%
Peat	Environmental → Terrestrial → Peat	14.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.81%
Loam	Environmental → Terrestrial → Soil → Loam	9.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.41%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.21%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.70%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.90%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100381841	3300000567	Peatlands Soil	AFTVDMFGSVPFTADFSEWYVGTTLLALLSVVALAGWGFYHSLGGETLFTAEPE*
JGI12694J13545_10220312	3300001166	Forest Soil	LILLRFGFVSLACAIFTVDLMANVPFSTDFSTWYMATSILALLSVVALAGWGFYHSLGGEPLWAVEEE*
soilL1_101538701	3300003267	Sugarcane Root And Bulk Soil	MLGNVPLTADLSAWYVGTSFLALLSVVALAGWGFYHSLGGKPLLHVEAGKELSYR*
Ga0062389_1005374221	3300004092	Bog Forest Soil	AAAIFTVDFASNIPFSADFSAWYMPTSILALLSVVALAGWGFYTSLGGAPVWKVEME*
Ga0062386_1005016813	3300004152	Bog Forest Soil	ACAIFTINLMANVPFSADFSAWYMPTSILALLSVVAIAGWGFYHSLGGQALWKVEME*
Ga0070733_103076104	3300005541	Surface Soil	IDMMAGLPFSADVSTWYMATSIPALLSLLAITGWGFYHSLGGEPLWKVELE*
Ga0070733_103950091	3300005541	Surface Soil	ANLPFTSDFSAWYIGGSLLALLSVVVLAVWGFYHSLGGELVWKFDAE*
Ga0068858_1018439311	3300005842	Switchgrass Rhizosphere	IFTVDMLANVPLTADLSAWYISSSFFALLSVVALAGWGFYHSLGGKPLLRTNDRAVS*
Ga0070766_102513541	3300005921	Soil	LANVPFTADTSAWYMPSSALALLSVVAMAVWGFYHSLGGEPIWRPEIE*
Ga0080026_100072334	3300005952	Permafrost Soil	ACAIFTVDMVSSLPFSSDLSTWYMATSITAILSVVALAGWGFYHSLGGEPLWVVETDD*
Ga0070765_1001914401	3300006176	Soil	FTVDMLANVPFTADLSAWYMTTAALALLSVVALAGWGFYHSLGGEPLWVVEAE*
Ga0070765_1012958351	3300006176	Soil	ACAIFTINLTANLPFSADFSAWYMTTSILALLSVVALAGWGFYHSLGGETVWRVEIE*
Ga0097621_1002006352	3300006237	Miscanthus Rhizosphere	LANVPLTADLSAWYISSSFFALLSVVALAGWGFYHSLGGKPLLRTNDRAVS*
Ga0116128_11738941	3300009518	Peatland	LACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE*
Ga0116220_102774192	3300009525	Peatlands Soil	LINVPFTADFSAWYMPTSVLALLSVVALAGWGFYHSLGGEPVWKEEME*
Ga0116136_10942621	3300009547	Peatland	PLACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE*
Ga0116136_11140181	3300009547	Peatland	PLACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAAWGFYHSLGGEQLWRPEIE*
Ga0116138_11272321	3300009552	Peatland	INMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE*
Ga0116133_11479821	3300009623	Peatland	MLANVPFTADFSAWYMSSAVLALLSVVALAGWGFYHSLGGEPVWRVEME*
Ga0116133_11639301	3300009623	Peatland	LACAIFTVNMLANVPFTADLSAWYMPTSVLALLSIVALAAWGFYQSLGGESWLRPEIE*
Ga0116102_11171631	3300009632	Peatland	MLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE*
Ga0116224_100913032	3300009683	Peatlands Soil	AVAIFTVNMLSNVPFSADFSAWYMTTSILALLSVVALAGWGFYQSLGGEILWRVEQE*
Ga0116131_10645511	3300009760	Peatland	IPLACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAAWGFYHSLGGEQLWRPEIE
Ga0134127_106481911	3300010399	Terrestrial Soil	LTCAIFTIDMLANVPFTADLSAWYMNASIFALLSVVALAGWGFYHSMGGAPVWSAESD*
Ga0126344_11511212	3300010866	Boreal Forest Soil	IVVRFGLIPLACAIFTVDMVSSLPFSSDLSTWYMATSITAILSVVALAGWGFYHSLGGTPLWVVENDD*
Ga0150983_130088103	3300011120	Forest Soil	GLVPLACAIFTVNMLANVPFTADTSSWYMTTSVLALLSVVALAGWGFYHSLGGEPIWRPEIE*
Ga0137407_106175391	3300012930	Vadose Zone Soil	FTINLMANVPFSSDFSMWYMPTSILALLSIVVLAGWGFYHSLGGEPVWKMELE*
Ga0157374_121781931	3300013296	Miscanthus Rhizosphere	VLRFGLVPLACAIFTINLMANVPFSADLSTWYMTTSILALLSVVVLAGWGFYHSLGSQPLWVAEPE*
Ga0157375_100681106	3300013308	Miscanthus Rhizosphere	CAIFTVDMLANVPLTADLSAWYISSSFFALLSVVALAGWGFYHSLGGKPLLRTNDRAVS*
Ga0181538_102317931	3300014162	Bog	DLLANVPFTGDLSAWYFGTTTFALLSVVALAGWGFYHSLGSEPLWQPNQL*
Ga0181531_106422861	3300014169	Bog	RFGLVPLACAIFTIDMLANVPLTADTSAWYFTDSALALLSVVALAGWGFYHSLGGETIWRPEID*
Ga0182018_103003201	3300014489	Palsa	IFTVNMLANVPFSADFSAWYMPTSILALLSVVALAGWGFYHSLGGEPLWKIEAE*
Ga0181525_105579911	3300014654	Bog	MLANVPFTADFSQWYMGTTALALLSVVALAVWGFYHSLAGEKVWKVEME*
Ga0137405_11173361	3300015053	Vadose Zone Soil	GNIPFTADFSAWYMSTSILALLSVLALAGWGFYHSLGGVPLWSAEMD*
Ga0137412_100533094	3300015242	Vadose Zone Soil	VPLAVAIFTVDMLVNVPFSADFSTWYMSTSLFALLSVVALAGWGFYHSLGGQSLWAAEAE
Ga0182035_114189561	3300016341	Soil	MLANVPFSSYFSAWYTPTRILALLSVVALAVWGFYHSLGGQPMWKIEME
Ga0187847_102235183	3300017948	Peatland	DMMAGVPFSADLSTWYMSTSIPALLSVVAMAGWGFYLSLGGQPLWRLEEG
Ga0187781_107764532	3300017972	Tropical Peatland	SSVPLTSDVSAWYFTDTFLALLTVVALAGWGFYHSLGGEKLWTPQMEE
Ga0187782_102028362	3300017975	Tropical Peatland	VPLAVAIFTIDMTSGLPFSHDLSTWYMTTSILALLSVVAIAGWGFYHSLGGEPVWKGEME
Ga0187767_102098332	3300017999	Tropical Peatland	VPLACAVFTIDLLGNVPFTANSSAWYLAPTALALLSVVALTGWGFYNSLGGEPLWKPDL
Ga0187868_10072167	3300018002	Peatland	PLACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAAWGFYHSLGGEQLWRPEIE
Ga0187876_10131134	3300018003	Peatland	LACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE
Ga0187855_107666712	3300018038	Peatland	CAVFTINLLANVPFSSDFSAWYMTTSILALLSVVALAGWGFYHSLGGEPVWRVELE
Ga0187766_110353522	3300018058	Tropical Peatland	RFGLVPLAVAMFTVDMLVTVPFTTDFGAWYMSTTVLALLSVVGLAGWGFYHSLGGQAVWRVEVE
Ga0187770_108563071	3300018090	Tropical Peatland	IAIFTIDMLANVPFSADFSSWYMTTSVLALVSVVAIAGWGFYHSLGGQPLFKVEME
Ga0181514_11890021	3300019268	Peatland	DMMANVPFSADLSTWYMPTSILSLLSVVVLAGWGFYHSLGGEPLWRAEPE
Ga0187797_12940901	3300019284	Peatland	PLAVAIFTVNLLANVSMTFDLSAWWFTTSLLALLSVVALAGWGFYHSLGGESLWKMQVE
Ga0182025_10382972	3300019786	Permafrost	VPLACAVFTINLMANVPFSADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEPLWRPEIE
Ga0193726_10093771	3300020021	Soil	RFGLVPLACAIFTIDLLVNVPLSADFSVWYMSASLLALSSVVTLAGWGFYHSLGGEVIRGMQDPD
Ga0193726_10192001	3300020021	Soil	RFGLVPLACAIFTIDLLVNVPLSADFSVWYMSASLLALSSVVALAGWGFYHSLGGEVIRGMQDPD
Ga0193726_10331445	3300020021	Soil	IVYRFGLVPLACAIFTIDLLVNVPLSADFSVWYMSASLLALLSVVALAGWGFYHSLGVEVIRGMQDPD
Ga0193726_13260931	3300020021	Soil	ALIVYRFGLVPLACAIFTIDLVVNVPLSADFSIWYMSGSLLALSSVVALAGWGFYHSRGGGVIRGMQHPD
Ga0210399_101588121	3300020581	Soil	VYRFGLIPLACAIFTINMMANVPFTGDFSYWYMPTFILALLSVVALAGWGFYHSLGGEPIWRPEID
Ga0210399_108805021	3300020581	Soil	AVGAFTVDMLANVPFTADVSEWYVPSTLLALLSVLVIAGWGFYHSLGGQSIWKLESE
Ga0210401_116455592	3300020583	Soil	LANVPFTADTSAWYMTTSVLALLSVVALAGWGFYHSLGGEPIWRPEIE
Ga0210400_114629331	3300021170	Soil	VDQFLSVPFTGEVSAWYFGMTGFALLSIIALAGWGFYHSLGSEPSWEPSGK
Ga0210398_112326251	3300021477	Soil	AVFTVNLADNIPFSADLSAWYMPASILALLSVVALAGWGFYHSLGGEPLWRVELE
Ga0210410_103634891	3300021479	Soil	NVPFTADLSEWYVPSTLLALLSVVAVAGWGFYHSLGGQAVWKVEME
Ga0242658_11018932	3300022530	Soil	IVVRFGLIPLACAIFTVDMVSSLPFSSDLSTWYMATSITAILSVVALAGWGFYHSLGGEPLWVVEKDD
Ga0212123_104020972	3300022557	Iron-Sulfur Acid Spring	VAIFTVDMLSNVPFSADFSTWYMSSSIFALLSVVALAGWGFYHSLAGRPLWRAEME
Ga0224563_10235011	3300022731	Soil	YAIAVLIVYRFGLIPLACAIFTINMLSNVPFTTDFSVWYMNTFALTLLSVVALAGWGFYQSLGGEPLWRPEIE
Ga0224562_10013131	3300022733	Soil	ACAVFTVNLADNIPLSADLSAWYMPTSILALLSVVALAGWGFYHSLGGEPLWRVELE
Ga0208189_10516071	3300025444	Peatland	TINMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE
Ga0208037_10086911	3300025448	Peatland	FGLIPLACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAAWGFYHSLGGEQLWRPEIE
Ga0208686_10762061	3300025500	Peatland	FTINMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE
Ga0208937_10041014	3300025506	Peatland	LIPLACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAAWGFYHSLGGEQLWRPEI
Ga0207703_108117362	3300026035	Switchgrass Rhizosphere	TCAIFTIDMLANVPFTADLSAWYMNASIFALLSVVALAGWGFYHSMGGAPVWSAESD
Ga0207641_102970621	3300026088	Switchgrass Rhizosphere	DMLANVPLTADLSAWYISSSFFALLSVVALAGWGFYHSLSGKPLLRTNDGAVN
Ga0209871_10078183	3300026217	Permafrost Soil	PLACAIFTVDMVSSLPFSSDLSTWYMATSITAILSVVALAGWGFYHSLGGEPLWVVETDD
Ga0209648_102378212	3300026551	Grasslands Soil	FGLVPLACAIFTVNMLANVPFTADTSAWYMATSVLALLSVVALAGWGFYHSLGGEPIWRLEIE
Ga0209733_10970101	3300027591	Forest Soil	GLVPLACAIFTINMLANVPFTADLSAWYMPTSALALLSVVALAGWGFYQSLGGEALWRPEIE
Ga0209330_10429411	3300027619	Forest Soil	FGFVSLACAIFTVDLMANVPFSTDFSTWYMATSILALLSVVALAGWGFYHSLGGEPLWAVEEE
Ga0209420_10711662	3300027648	Forest Soil	IAVLIVYRFGLVPLACAIFTINMLASVPLTADTSAWYFTDSALALLSVVAIAGWGFYHSLGGETIWRPEIE
Ga0209420_12077601	3300027648	Forest Soil	PLACAVFTINLMANVPFSADFSAWYMPTSVLALLSVVALAGWGFYHSLGSETIWRPEIE
Ga0208696_11945901	3300027696	Peatlands Soil	IFTVNMLSNVPFSADFSAWYMTTSILALLSVVALAGWGFYQSLGGEILWRVEQE
Ga0209380_100575473	3300027889	Soil	MLGNVPFTTDFSAWYAATAFWALLSVVALAGWGFYHSLGGEPVWKVEME
Ga0209380_108305961	3300027889	Soil	LACAIFTVNMMANLPISADLSAWYVPTSVLAVLSVVALAGWGFYHSLGGEPLWHVETE
Ga0209415_103206131	3300027905	Peatlands Soil	LACAIFTINMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEPVWKVEME
Ga0268264_103266322	3300028381	Switchgrass Rhizosphere	TVDMLANVPLTADLSAWYISSSFFALLSVVALAGWGFYHSLSGKPLLRTNDGAVN
Ga0302225_103413912	3300028780	Palsa	VIMIFRFGLVPLAVAAFTVDMLANVPFTADFSQWYMGTTALTLVSVVALAVWGFYHSLAGEKVWKVEME
Ga0302222_100930711	3300028798	Palsa	LANVPFTADFSQWYMGTTALTLVSVVALAVWGFYHSLAGEKVWKVEME
Ga0302221_101891371	3300028806	Palsa	IPLACAIFTVELLGNLPISTDLSAWYMPTCVLAVLSIVALAGWGFYHSLGGEPLWHAEID
Ga0246001_10646101	3300029889	Peat	INMLGNVPFTADLSAWYMPTSVLALLSVVALAGWGFYHSLGGEQLWRPEVE
Ga0302143_11212492	3300029918	Bog	RFGLIPLACAIFTVNLLANVPFTADTSVWYFGNSMFDLLSVVALAGFGFYYSRGGEGLWKAEV
Ga0311340_105335341	3300029943	Palsa	TIDLMANVPFSAELSTWYMPTSILALLSVVALAAWGFYHSLGGERVWRVEME
Ga0311332_107575252	3300029984	Fen	VRFGLVPLACAVFTVNLLANVPFTSDFSVWYATTPVAMLLSVIALAGWGFYNALGDQPLWKLDPEER
Ga0302270_102959511	3300030011	Bog	INLMANVPFSADLSAWYMPASVLALLSVVALAGWGFYHSLGGETLWRPEIE
Ga0302178_103148742	3300030013	Palsa	NLMANVPFSADFSAWYMPASVLALLSVIALAGWGFYHSLGGETIWRPEIE
Ga0302175_100055061	3300030014	Fen	VCAIFTVDLLANVPFTADVSAWYFGTSLVALFSVVALAGWGFYTSLGDEPLWKPDV
Ga0311344_104632631	3300030020	Bog	YRFGLVPLACAIFTVNLLANVPFTADASVWYFGNSIFDLVSVLALTGWGFYHSLGGEGFWKTGS
Ga0302282_13719472	3300030045	Fen	FVPLACAVFTINLMANVPFSADLSAWYMPASVLALLSVVALAGWGFYHSLGGETLWRPEI
Ga0302191_103273851	3300030049	Bog	YGIAAIIVLRFGFIPLLCAIFTINLLANVPFSSDFSTWYMPSSIMALLSVVALAGWGFYNSLGGEAVWRPELE
Ga0311353_115917511	3300030399	Palsa	GFVPLACAIFTIDLMANVPFSAELSTWYMPTSILALLSVVALAAWGFYHSLGGERVWRVEME
Ga0311345_106955851	3300030688	Bog	RFGFVPLACAVFTINLMANVPFSADLSAWYMPASVLALLSVVALAGWGFYHSLGGETLWRPEIE
Ga0265460_120304601	3300030740	Soil	LVPLAVGAFTVDMLANVPFTADFSAWYMTTAALALLSVVALAGWGFYHSLGGEPLWVVEA
Ga0170834_1073065622	3300031057	Forest Soil	LACAIFTINLMANIPFSADLSTWYMTTSVFALLSVVALAGWGFYHSLGGEPVWKVEME
Ga0170823_175278202	3300031128	Forest Soil	FGLVPLACAIFTVNMLANVPFTADTSAWYMTTSMLALLSVAALAGWGFYHSLGGETIWRPEIE
Ga0302325_123579371	3300031234	Palsa	ACAIFTVDMLGNVPFTSDLSAWYMSTSVLALLSVVALAAWGFYHSLGGEPLWRPEIE
Ga0265340_100683201	3300031247	Rhizosphere	LLGNVPFTGDVSAWYFGSTMFALLSVVALAVWGFYHSLGGEPLWQPSQL
Ga0170818_1006733541	3300031474	Forest Soil	AFTVDLLGNIPFTADFSAWYAAPAFLALLSVIALAGWGFYHSLGGEPLWVVEPD
Ga0307474_101872084	3300031718	Hardwood Forest Soil	VLIVFRFGLIPLAVAIFTVDMVSGLPFSADFSMWYMPTSILALLSVVALAGWGFYHSLGGEPLWVVETD
Ga0307474_108775562	3300031718	Hardwood Forest Soil	LAVAAFTVDMLANVPLTADFSEWYMGTTALALLSIVALACWGFYHSLGGGPVWNVEME
Ga0307474_112429851	3300031718	Hardwood Forest Soil	IVFRFGLVPLACAIFTVNMLVNVPFSADFSVWYMNTSILALLSVVVLAGWGFYHSLGGEPLWRAEVE
Ga0307474_116601912	3300031718	Hardwood Forest Soil	VDLLGNVPFTTDFSAWYMSTAALALLSVVALAGWGFYHSLGGEPLWVVESE
Ga0307475_105829702	3300031754	Hardwood Forest Soil	LAVGAFTVDMLANVPFTADVSEWYVPSTLLALLSVVAVAGWGFYHSLGGQAVWKVEVE
Ga0307479_100900523	3300031962	Hardwood Forest Soil	VAIFTIDMMEGVPFSADFSAWYMTTSILALLSVLVLAGWGFYHSLGGRPLWKLETE
Ga0307479_113453322	3300031962	Hardwood Forest Soil	IFTVNMLANVPFTADTSAWYMTTSVLAMLSVVALAGWGFYHSLGGEPVWRPEID
Ga0306922_107118372	3300032001	Soil	LAVAIFTVNLIINVPFSADISAWYMPRSMMSLLSVLAIAGWGFYHSLGGQPIWKVEME
Ga0307471_1026681732	3300032180	Hardwood Forest Soil	VPLAAAAFTVDMLGGVPFTADFSAWYMGATTLALLSVVAMAGWGFYHSLGGEPVWKVEME
Ga0335079_108619351	3300032783	Soil	LVPLAVAAFTIDMLENVPFTADFSQWYAGTTLLALLGVLAIAGWGFYHSLGGQPLWKLES
Ga0314861_0524018_12_161	3300033977	Peatland	MLANVPFTADFSAWYMGTTLLALLSVIVIAGWGFYHSLGGQTVWKVEME

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences